Index: trunk/NVTK/INSTALL/ins_nvtk.ksh
===================================================================
--- trunk/NVTK/INSTALL/ins_nvtk.ksh	(revision 1141)
+++ trunk/NVTK/INSTALL/ins_nvtk.ksh	(revision 1141)
@@ -0,0 +1,283 @@
+#!/bin/ksh
+######################################################
+# Original : C. Talandier for ESOPA
+# Contact  : opatlod@locean-ipsl.upmc.fr
+#
+# This script aims to (for each standard configuration) :
+#  - I. Take into account specific files changes
+#       - ./modipsl/util/ins_make
+#       - ./modipsl/config/NAME_CONFIG/AA_make*
+#       - ./modipsl/config/NAME_CONFIG/scripts/BB_make.ldef
+#  - II. Build configuration's environment & dependencies
+#       - ./modipsl/config/NAME_CONFIG/WORK
+#       - ./modipsl/config/NAME_CONFIG/MY_SRC
+#       - ./modipsl/config/NAME_CONFIG/scripts/BB_make
+#  - III. Build results sub-directories in the OUTDIR 
+#         directory specified by user just below
+#         NEMO_VALID/WNAME_CONFIG/
+#                    |-- mon		--> MONO run
+#                    |   |-- 1_SHORT
+#                    |   |-- 2_SHORT
+#                    |   |-- LONG
+#                    |   `-- GTIME
+#                    |-- mpi		--> MPI run
+#                    |   |-- 1_SHORT
+#                    |   |-- 2_SHORT
+#                    |   |-- LONG
+#                    |   `-- GTIME
+#                    `-- omp		--> Open-MP run
+#                        |-- 1_SHORT
+#                        |-- 2_SHORT
+#                        |-- LONG
+#                        `-- GTIME
+#
+#  - IV. Modify lance_batch.ksh & assessment.ksh scripts
+#  - V. Preliminary compilations
+######################################################
+
+#set -xv
+
+##########################################################
+##### Begin Users modifications
+##########################################################
+# OUTDIR : working directory from which jobs will be launched 
+#          & results stored
+# INPUTD : directory where to get ORCA2_LIM_nemo_v2.tar 
+# REFDAT : directory where to get results from reference tags
+# DECOMP : total number of processors which will be used
+# MAIL   : give your e-mail
+# UAGRIF : one of the standard configurations is based on AGRIF yes/no
+##########################################################
+OUTDIR=/Users/ctlod/WORK/AZE/modipsl/config
+INPUTD=/u/rech/eee/reee831/IO_NEMO_ORCA2_LIM
+REFDAT=/u/rech/eee/reee831/NEMO_VALIDATION
+DECOMP=8
+MAIL="ctlod@locean-ipsl.upmc.fr"
+UAGRIF=yes
+##########################################################
+##### End   Users modifications
+##########################################################
+
+
+# Standard configurations
+NBCFG=4
+CONF[0]=ORCA2_LIM
+CONF[1]=GYRE
+CONF[2]=GYRE_LOBSTER
+CONF[3]=ZAGRIF
+LCLDIR=`pwd`
+
+# Use a modified modipsl script: ins_make
+# which allows to build Makefiles of a specific configuration
+# using the following syntax: ins_make -w NAME_CONF
+cp ./MODIPSL_FILES/ins_make ../../../util/.
+
+# Set following variable in AA_make.ldef script
+# - WWDIR = directory where to store results and jobs
+CAR_WORK_tmp=$( grep 'WWDIR=' ./CONFIG_FILES/AA_make.ldef )
+CAR_WORK=`echo $CAR_WORK_tmp | cut -f 1 -d " " `
+sed -e "s?${CAR_WORK}?WWDIR=${OUTDIR}?" ./CONFIG_FILES/AA_make.ldef > ./CONFIG_FILES/AA_make.ldef.$$ 
+mv ./CONFIG_FILES/AA_make.ldef.$$  ./CONFIG_FILES/AA_make.ldef && rm -f ./CONFIG_FILES/AA_make.ldef.$$
+
+# Get the current target name
+LOCTARG=`../../../util/w_i_h`
+
+# Loop over each standard configuration
+# #####################################
+ind=0
+while [ $ind -lt ${NBCFG} ]
+do
+       # I. Take into account specific changes
+       # #####################################
+       # Set following variables in job_NAME_CONF.ksh script
+       # - MAINDIR = directory where to get namelist input files
+       # - WORK    = directory where to store results
+       # - REF_OD  = directory where Are stored results from previous tags
+       cd ../../../.. ; NAME_ARCH=$( pwd ) ;
+       cd ${LCLDIR}
+       echo ${NAME_ARCH}
+       CAR_MAIN_tmp=$( grep 'MAINDIR=' ./JOBS/job_${CONF[${ind}]}.ksh )
+       CAR_MAIN=`echo $CAR_MAIN_tmp | cut -f 1 -d " " `
+       CAR_WORK_tmp=$( grep 'WORK=' ./JOBS/job_${CONF[${ind}]}.ksh )
+       CAR_WORK=`echo $CAR_WORK_tmp | cut -f 1 -d " " `
+       CAR_REFO_tmp=$( grep 'REF_OD=' ./JOBS/job_${CONF[${ind}]}.ksh  | head -1 )
+       CAR_REFO=`echo $CAR_REFO_tmp | cut -f 1 -d " " `
+       sed -e "s?${CAR_MAIN}?MAINDIR=${NAME_ARCH}?" -e "s?${CAR_WORK}?WORK=${OUTDIR}?" \
+       -e "s?${CAR_REFO}?REF_OD=${REFDAT}?" ./JOBS/job_${CONF[${ind}]}.ksh > ./JOBS/job_tmp.$$
+       mv ./JOBS/job_tmp.$$  ./JOBS/job_${CONF[${ind}]}.ksh && rm -f ./JOBS/job_tmp.$$
+
+       # II. Build configuration environment
+       # ###################################
+       (cd ../ ; ./use_cfg -n ${CONF[${ind}]} ;)
+echo '			'
+echo '	     >>>>>>>>   Configuration directories have been built:'
+echo "			./config/${CONF[${ind}]}/WORK"
+echo "			./config/${CONF[${ind}]}/MY_SRC"
+echo '			'
+
+       cp ./CONFIG_FILES/AA_make* ../../${CONF[${ind}]}/.
+       cp ./CONFIG_FILES/BB_make.ldef_${CONF[${ind}]} ../../${CONF[${ind}]}/scripts/BB_make.ldef
+
+       # Configuration dependencies
+       (cd ../../${CONF[${ind}]} ; ../NVTK/fait_AA_make ; )
+echo '			'
+echo "             >>>>>>>>   Dependencies file ./config/${CONF[${ind}]}/BB_make have been re-built"
+echo '			'
+
+       # III. Build output sub-directories
+       # #################################
+       # Directories from where Jobs will be launched 
+       # and where results will be stored before analysed
+       cd ${OUTDIR}
+       if [ ! -d 'NEMO_VALID' ] ;  then
+           mkdir  NEMO_VALID
+       fi
+           cd NEMO_VALID
+       if [ ! -d W${CONF[${ind}]} ] ;  then
+           mkdir W${CONF[${ind}]}
+       fi
+       if [ ! -d W${CONF[${ind}]}/mon ] ;  then
+           mkdir W${CONF[${ind}]}/mon
+       fi
+       if [ ! -d W${CONF[${ind}]}/mon/LONG ] ;  then
+           mkdir W${CONF[${ind}]}/mon/LONG
+           mkdir W${CONF[${ind}]}/mon/LONG/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/LONG/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mon/GTIME ] ;  then
+           mkdir W${CONF[${ind}]}/mon/GTIME
+           mkdir W${CONF[${ind}]}/mon/GTIME/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/GTIME/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mon/1_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/mon/1_SHORT
+           mkdir W${CONF[${ind}]}/mon/1_SHORT/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/1_SHORT/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mon/2_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/mon/2_SHORT
+           mkdir W${CONF[${ind}]}/mon/2_SHORT/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/2_SHORT/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mpi ] ;  then
+           mkdir W${CONF[${ind}]}/mpi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mpi/LONG ] ;  then
+           mkdir W${CONF[${ind}]}/mpi/LONG
+           mkdir W${CONF[${ind}]}/mpi/LONG/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/LONG/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mpi/GTIME ] ;  then
+           mkdir W${CONF[${ind}]}/mpi/GTIME
+           mkdir W${CONF[${ind}]}/mpi/GTIME/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/GTIME/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mpi/1_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/mpi/1_SHORT
+           mkdir W${CONF[${ind}]}/mpi/1_SHORT/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/1_SHORT/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/mpi/2_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/mpi/2_SHORT
+           mkdir W${CONF[${ind}]}/mpi/2_SHORT/REF
+	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/2_SHORT/RUN ; fi
+       fi
+       if [ ! -d W${CONF[${ind}]}/omp ] ;  then
+           mkdir W${CONF[${ind}]}/omp
+       fi
+       if [ ! -d W${CONF[${ind}]}/omp/LONG ] ;  then
+           mkdir W${CONF[${ind}]}/omp/LONG
+           mkdir W${CONF[${ind}]}/omp/LONG/REF
+       fi
+       if [ ! -d W${CONF[${ind}]}/omp/GTIME ] ;  then
+           mkdir W${CONF[${ind}]}/omp/GTIME
+           mkdir W${CONF[${ind}]}/omp/GTIME/REF
+       fi
+       if [ ! -d W${CONF[${ind}]}/omp/1_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/omp/1_SHORT
+           mkdir W${CONF[${ind}]}/omp/1_SHORT/REF
+       fi
+       if [ ! -d W${CONF[${ind}]}/omp/2_SHORT ] ;  then
+           mkdir W${CONF[${ind}]}/omp/2_SHORT
+           mkdir W${CONF[${ind}]}/omp/2_SHORT/REF
+       fi
+echo '			'
+echo '	     >>>>>>>>   The following sub-directories have been built '
+echo '                        under main directory '$( pwd )
+echo '			They are dedicated to store results'
+       tree W${CONF[${ind}]}
+echo '			'
+
+       cd ${LCLDIR}
+
+       let ind=$ind+1
+done
+
+
+# IV. Modify lance_batch.ksh & assessment.ksh scripts
+# ###################################################
+# Set following variables in lance_batch.ksh script
+# - IODIR = directory where to get ORCA2_LIM_nemo_v2.tar
+# - PRC   = total number of processors which will be used
+
+CAR_INPU_tmp=$( grep 'IODIR=' ./JOBS/lance_batch.ksh )
+CAR_INPU=`echo $CAR_INPU_tmp | cut -f 1 -d " " `
+CAR_PROC_tmp=$( grep 'PRC=' ./JOBS/lance_batch.ksh )
+CAR_PROC=`echo $CAR_PROC_tmp | cut -f 1 -d " " `
+CAR_TARG_tmp=$( grep 'TARGET=' ./JOBS/lance_batch.ksh | head -1)
+CAR_TARG=`echo $CAR_TARG_tmp | cut -f 1 -d " " `
+sed -e "s?${CAR_INPU}?IODIR=${INPUTD}?" -e "s?${CAR_PROC}?PRC=${DECOMP}?" \
+-e "s/${CAR_TARG}/TARGET=${LOCTARG}/" ./JOBS/lance_batch.ksh > ./JOBS/lance_batch.$$
+mv ./JOBS/lance_batch.$$  ./JOBS/lance_batch.ksh && rm -f ./JOBS/lance_batch.$$
+chmod 744 ./JOBS/lance_batch.ksh
+
+# Set following variables in assessment.ksh script
+# - TARGET = the current plateform 
+# - MAIL   = your e-mail
+CAR_TARG_tmp=$( grep 'TARGET=' ./JOBS/assessment.ksh )
+CAR_TARG=`echo $CAR_TARG_tmp | cut -f 1 -d " " `
+CAR_MAIL_tmp=$( grep 'EMAIL=' ./JOBS/assessment.ksh )
+CAR_MAIL=`echo $CAR_MAIL_tmp | cut -f 1 -d " " `
+sed -e "s/${CAR_TARG}/TARGET=${LOCTARG}/" -e "s/${CAR_MAIL}/EMAIL='${MAIL}'/" \
+./JOBS/assessment.ksh > ./JOBS/assessment.$$
+mv ./JOBS/assessment.$$  ./JOBS/assessment.ksh && rm -f ./JOBS/assessment.$$
+chmod 744 ./JOBS/assessment.ksh
+
+# V. Preliminary compilations
+# ###########################
+
+# IOIPSL compilation
+../../../util/ins_make -w IOIPSL
+if [ ${LOCTARG} = 'sx8brodie' ] ; then
+    (cd ../../../modeles/IOIPSL/src ; sxgmake ;)
+else
+    (cd ../../../modeles/IOIPSL/src ; gmake ;)
+fi
+echo '			'
+echo '	     >>>>>>>>   IOIPSL Makefile and compilation done'
+echo '			'
+
+# AGRIF compilation
+if [ ${UAGRIF} = 'yes' ] ;  then
+    ../../../util/ins_make -w AGRIF
+    (cd ../../../modeles/AGRIF/ ; gmake ;)
+    echo '			'
+    echo '			AGRIF Makefile and compilation done'
+    echo '			'
+fi
+
+
+echo '			'
+echo '			#############################################################'
+echo '             >>>>>>>>   Now set "by hand" the mpi domain decomposition indices jpni, '
+echo '                        jpnj & jpnij in par_oce.F90_keep files (keeping the "_keep" extension) '
+echo "                        in coherence with the ${DECOMP} total number of processors you just set "
+echo '                        Make this modification in the following directories:         '
+ind=0
+while [ $ind -lt ${NBCFG} ]
+do
+echo "                        ../config/${CONF[${ind}]}/MY_SRC"
+let ind=$ind+1
+done
+echo '			###########################################################'
+echo '			'
Index: trunk/NVTK/INSTALL/ins_valid.ksh
===================================================================
--- trunk/NVTK/INSTALL/ins_valid.ksh	(revision 1140)
+++ 	(revision )
@@ -1,283 +1,0 @@
-#!/bin/ksh
-######################################################
-# Original : C. Talandier for ESOPA
-# Contact  : opatlod@locean-ipsl.upmc.fr
-#
-# This script aims to (for each standard configuration) :
-#  - I. Take into account specific files changes
-#       - ./modipsl/util/ins_make
-#       - ./modipsl/config/NAME_CONFIG/AA_make*
-#       - ./modipsl/config/NAME_CONFIG/scripts/BB_make.ldef
-#  - II. Build configuration's environment & dependencies
-#       - ./modipsl/config/NAME_CONFIG/WORK
-#       - ./modipsl/config/NAME_CONFIG/MY_SRC
-#       - ./modipsl/config/NAME_CONFIG/scripts/BB_make
-#  - III. Build results sub-directories in the OUTDIR 
-#         directory specified by user just below
-#         NEMO_VALID/WNAME_CONFIG/
-#                    |-- mon		--> MONO run
-#                    |   |-- 1_SHORT
-#                    |   |-- 2_SHORT
-#                    |   |-- LONG
-#                    |   `-- GTIME
-#                    |-- mpi		--> MPI run
-#                    |   |-- 1_SHORT
-#                    |   |-- 2_SHORT
-#                    |   |-- LONG
-#                    |   `-- GTIME
-#                    `-- omp		--> Open-MP run
-#                        |-- 1_SHORT
-#                        |-- 2_SHORT
-#                        |-- LONG
-#                        `-- GTIME
-#
-#  - IV. Modify lance_batch.ksh & assessment.ksh scripts
-#  - V. Preliminary compilations
-######################################################
-
-#set -xv
-
-##########################################################
-##### Begin Users modifications
-##########################################################
-# OUTDIR : working directory from which jobs will be launched 
-#          & results stored
-# INPUTD : directory where to get ORCA2_LIM_nemo_v2.tar 
-# REFDAT : directory where to get results from reference tags
-# DECOMP : total number of processors which will be used
-# MAIL   : give your e-mail
-# UAGRIF : one of the standard configurations is based on AGRIF yes/no
-##########################################################
-OUTDIR=/Users/ctlod/WORK/AZE/modipsl/config
-INPUTD=/u/rech/eee/reee831/IO_NEMO_ORCA2_LIM
-REFDAT=/u/rech/eee/reee831/NEMO_VALIDATION
-DECOMP=8
-MAIL="ctlod@locean-ipsl.upmc.fr"
-UAGRIF=yes
-##########################################################
-##### End   Users modifications
-##########################################################
-
-
-# Standard configurations
-NBCFG=4
-CONF[0]=ORCA2_LIM
-CONF[1]=GYRE
-CONF[2]=GYRE_LOBSTER
-CONF[3]=ZAGRIF
-LCLDIR=`pwd`
-
-# Use a modified modipsl script: ins_make
-# which allows to build Makefiles of a specific configuration
-# using the following syntax: ins_make -w NAME_CONF
-cp ./MODIPSL_FILES/ins_make ../../../util/.
-
-# Set following variable in AA_make.ldef script
-# - WWDIR = directory where to store results and jobs
-CAR_WORK_tmp=$( grep 'WWDIR=' ./CONFIG_FILES/AA_make.ldef )
-CAR_WORK=`echo $CAR_WORK_tmp | cut -f 1 -d " " `
-sed -e "s?${CAR_WORK}?WWDIR=${OUTDIR}?" ./CONFIG_FILES/AA_make.ldef > ./CONFIG_FILES/AA_make.ldef.$$ 
-mv ./CONFIG_FILES/AA_make.ldef.$$  ./CONFIG_FILES/AA_make.ldef && rm -f ./CONFIG_FILES/AA_make.ldef.$$
-
-# Get the current target name
-LOCTARG=`../../../util/w_i_h`
-
-# Loop over each standard configuration
-# #####################################
-ind=0
-while [ $ind -lt ${NBCFG} ]
-do
-       # I. Take into account specific changes
-       # #####################################
-       # Set following variables in job_NAME_CONF.ksh script
-       # - MAINDIR = directory where to get namelist input files
-       # - WORK    = directory where to store results
-       # - REF_OD  = directory where Are stored results from previous tags
-       cd ../../../.. ; NAME_ARCH=$( pwd ) ;
-       cd ${LCLDIR}
-       echo ${NAME_ARCH}
-       CAR_MAIN_tmp=$( grep 'MAINDIR=' ./JOBS/job_${CONF[${ind}]}.ksh )
-       CAR_MAIN=`echo $CAR_MAIN_tmp | cut -f 1 -d " " `
-       CAR_WORK_tmp=$( grep 'WORK=' ./JOBS/job_${CONF[${ind}]}.ksh )
-       CAR_WORK=`echo $CAR_WORK_tmp | cut -f 1 -d " " `
-       CAR_REFO_tmp=$( grep 'REF_OD=' ./JOBS/job_${CONF[${ind}]}.ksh  | head -1 )
-       CAR_REFO=`echo $CAR_REFO_tmp | cut -f 1 -d " " `
-       sed -e "s?${CAR_MAIN}?MAINDIR=${NAME_ARCH}?" -e "s?${CAR_WORK}?WORK=${OUTDIR}?" \
-       -e "s?${CAR_REFO}?REF_OD=${REFDAT}?" ./JOBS/job_${CONF[${ind}]}.ksh > ./JOBS/job_tmp.$$
-       mv ./JOBS/job_tmp.$$  ./JOBS/job_${CONF[${ind}]}.ksh && rm -f ./JOBS/job_tmp.$$
-
-       # II. Build configuration environment
-       # ###################################
-       (cd ../ ; ./use_cfg -n ${CONF[${ind}]} ;)
-echo '			'
-echo '	     >>>>>>>>   Configuration directories have been built:'
-echo "			./config/${CONF[${ind}]}/WORK"
-echo "			./config/${CONF[${ind}]}/MY_SRC"
-echo '			'
-
-       cp ./CONFIG_FILES/AA_make* ../../${CONF[${ind}]}/.
-       cp ./CONFIG_FILES/BB_make.ldef_${CONF[${ind}]} ../../${CONF[${ind}]}/scripts/BB_make.ldef
-
-       # Configuration dependencies
-       (cd ../../${CONF[${ind}]} ; ../NVTK/fait_AA_make ; )
-echo '			'
-echo "             >>>>>>>>   Dependencies file ./config/${CONF[${ind}]}/BB_make have been re-built"
-echo '			'
-
-       # III. Build output sub-directories
-       # #################################
-       # Directories from where Jobs will be launched 
-       # and where results will be stored before analysed
-       cd ${OUTDIR}
-       if [ ! -d 'NEMO_VALID' ] ;  then
-           mkdir  NEMO_VALID
-       fi
-           cd NEMO_VALID
-       if [ ! -d W${CONF[${ind}]} ] ;  then
-           mkdir W${CONF[${ind}]}
-       fi
-       if [ ! -d W${CONF[${ind}]}/mon ] ;  then
-           mkdir W${CONF[${ind}]}/mon
-       fi
-       if [ ! -d W${CONF[${ind}]}/mon/LONG ] ;  then
-           mkdir W${CONF[${ind}]}/mon/LONG
-           mkdir W${CONF[${ind}]}/mon/LONG/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/LONG/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mon/GTIME ] ;  then
-           mkdir W${CONF[${ind}]}/mon/GTIME
-           mkdir W${CONF[${ind}]}/mon/GTIME/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/GTIME/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mon/1_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/mon/1_SHORT
-           mkdir W${CONF[${ind}]}/mon/1_SHORT/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/1_SHORT/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mon/2_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/mon/2_SHORT
-           mkdir W${CONF[${ind}]}/mon/2_SHORT/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mon/2_SHORT/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mpi ] ;  then
-           mkdir W${CONF[${ind}]}/mpi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mpi/LONG ] ;  then
-           mkdir W${CONF[${ind}]}/mpi/LONG
-           mkdir W${CONF[${ind}]}/mpi/LONG/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/LONG/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mpi/GTIME ] ;  then
-           mkdir W${CONF[${ind}]}/mpi/GTIME
-           mkdir W${CONF[${ind}]}/mpi/GTIME/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/GTIME/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mpi/1_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/mpi/1_SHORT
-           mkdir W${CONF[${ind}]}/mpi/1_SHORT/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/1_SHORT/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/mpi/2_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/mpi/2_SHORT
-           mkdir W${CONF[${ind}]}/mpi/2_SHORT/REF
-	   if [ ${LOCTARG} = 'osxxlf' ] ; then mkdir W${CONF[${ind}]}/mpi/2_SHORT/RUN ; fi
-       fi
-       if [ ! -d W${CONF[${ind}]}/omp ] ;  then
-           mkdir W${CONF[${ind}]}/omp
-       fi
-       if [ ! -d W${CONF[${ind}]}/omp/LONG ] ;  then
-           mkdir W${CONF[${ind}]}/omp/LONG
-           mkdir W${CONF[${ind}]}/omp/LONG/REF
-       fi
-       if [ ! -d W${CONF[${ind}]}/omp/GTIME ] ;  then
-           mkdir W${CONF[${ind}]}/omp/GTIME
-           mkdir W${CONF[${ind}]}/omp/GTIME/REF
-       fi
-       if [ ! -d W${CONF[${ind}]}/omp/1_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/omp/1_SHORT
-           mkdir W${CONF[${ind}]}/omp/1_SHORT/REF
-       fi
-       if [ ! -d W${CONF[${ind}]}/omp/2_SHORT ] ;  then
-           mkdir W${CONF[${ind}]}/omp/2_SHORT
-           mkdir W${CONF[${ind}]}/omp/2_SHORT/REF
-       fi
-echo '			'
-echo '	     >>>>>>>>   The following sub-directories have been built '
-echo '                        under main directory '$( pwd )
-echo '			They are dedicated to store results'
-       tree W${CONF[${ind}]}
-echo '			'
-
-       cd ${LCLDIR}
-
-       let ind=$ind+1
-done
-
-
-# IV. Modify lance_batch.ksh & assessment.ksh scripts
-# ###################################################
-# Set following variables in lance_batch.ksh script
-# - IODIR = directory where to get ORCA2_LIM_nemo_v2.tar
-# - PRC   = total number of processors which will be used
-
-CAR_INPU_tmp=$( grep 'IODIR=' ./JOBS/lance_batch.ksh )
-CAR_INPU=`echo $CAR_INPU_tmp | cut -f 1 -d " " `
-CAR_PROC_tmp=$( grep 'PRC=' ./JOBS/lance_batch.ksh )
-CAR_PROC=`echo $CAR_PROC_tmp | cut -f 1 -d " " `
-CAR_TARG_tmp=$( grep 'TARGET=' ./JOBS/lance_batch.ksh | head -1)
-CAR_TARG=`echo $CAR_TARG_tmp | cut -f 1 -d " " `
-sed -e "s?${CAR_INPU}?IODIR=${INPUTD}?" -e "s?${CAR_PROC}?PRC=${DECOMP}?" \
--e "s/${CAR_TARG}/TARGET=${LOCTARG}/" ./JOBS/lance_batch.ksh > ./JOBS/lance_batch.$$
-mv ./JOBS/lance_batch.$$  ./JOBS/lance_batch.ksh && rm -f ./JOBS/lance_batch.$$
-chmod 744 ./JOBS/lance_batch.ksh
-
-# Set following variables in assessment.ksh script
-# - TARGET = the current plateform 
-# - MAIL   = your e-mail
-CAR_TARG_tmp=$( grep 'TARGET=' ./JOBS/assessment.ksh )
-CAR_TARG=`echo $CAR_TARG_tmp | cut -f 1 -d " " `
-CAR_MAIL_tmp=$( grep 'EMAIL=' ./JOBS/assessment.ksh )
-CAR_MAIL=`echo $CAR_MAIL_tmp | cut -f 1 -d " " `
-sed -e "s/${CAR_TARG}/TARGET=${LOCTARG}/" -e "s/${CAR_MAIL}/EMAIL='${MAIL}'/" \
-./JOBS/assessment.ksh > ./JOBS/assessment.$$
-mv ./JOBS/assessment.$$  ./JOBS/assessment.ksh && rm -f ./JOBS/assessment.$$
-chmod 744 ./JOBS/assessment.ksh
-
-# V. Preliminary compilations
-# ###########################
-
-# IOIPSL compilation
-../../../util/ins_make -w IOIPSL
-if [ ${LOCTARG} = 'sx8brodie' ] ; then
-    (cd ../../../modeles/IOIPSL/src ; sxgmake ;)
-else
-    (cd ../../../modeles/IOIPSL/src ; gmake ;)
-fi
-echo '			'
-echo '	     >>>>>>>>   IOIPSL Makefile and compilation done'
-echo '			'
-
-# AGRIF compilation
-if [ ${UAGRIF} = 'yes' ] ;  then
-    ../../../util/ins_make -w AGRIF
-    (cd ../../../modeles/AGRIF/ ; gmake ;)
-    echo '			'
-    echo '			AGRIF Makefile and compilation done'
-    echo '			'
-fi
-
-
-echo '			'
-echo '			#############################################################'
-echo '             >>>>>>>>   Now set "by hand" the mpi domain decomposition indices jpni, '
-echo '                        jpnj & jpnij in par_oce.F90_keep files (keeping the "_keep" extension) '
-echo "                        in coherence with the ${DECOMP} total number of processors you just set "
-echo '                        Make this modification in the following directories:         '
-ind=0
-while [ $ind -lt ${NBCFG} ]
-do
-echo "                        ../config/${CONF[${ind}]}/MY_SRC"
-let ind=$ind+1
-done
-echo '			###########################################################'
-echo '			'
