Index: /NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/chap_LBC.tex
===================================================================
--- /NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/chap_LBC.tex	(revision 11533)
+++ /NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/chap_LBC.tex	(revision 11534)
@@ -113,5 +113,5 @@
 \begin{description}
 
-\item[free-slip boundary condition (\np{rn\_shlat}\forcode{ = 0}):] the tangential velocity at
+\item[free-slip boundary condition (\np{rn\_shlat}\forcode{=0}):] the tangential velocity at
   the coastline is equal to the offshore velocity,
   \ie\ the normal derivative of the tangential velocity is zero at the coast,
@@ -119,5 +119,5 @@
   (\autoref{fig:LBC_shlat}-a).
 
-\item[no-slip boundary condition (\np{rn\_shlat}\forcode{ = 2}):] the tangential velocity vanishes at the coastline.
+\item[no-slip boundary condition (\np{rn\_shlat}\forcode{=2}):] the tangential velocity vanishes at the coastline.
   Assuming that the tangential velocity decreases linearly from
   the closest ocean velocity grid point to the coastline,
@@ -361,5 +361,5 @@
 %-----------------------------------------------------------------------------------------------
 
-Options are defined through the \nam{bdy} \nam{bdy\_dta} namelist variables.
+Options are defined through the \nam{bdy} and \nam{bdy\_dta} namelist variables.
 The BDY module is the core implementation of open boundary conditions for regional configurations on
 ocean temperature, salinity, barotropic-baroclinic velocities, ice-snow concentration, thicknesses, temperatures, salinity and melt ponds concentration and thickness.
@@ -376,9 +376,9 @@
 \label{subsec:BDY_namelist}
 
-The BDY module is activated by setting \np{ln\_bdy}\forcode{ = .true.} .
+The BDY module is activated by setting \np{ln\_bdy}\forcode{=.true.} .
 It is possible to define more than one boundary ``set'' and apply different boundary conditions to each set.
 The number of boundary sets is defined by \np{nb\_bdy}.
 Each boundary set can be either defined as a series of straight line segments directly in the namelist
-(\np{ln\_coords\_file}\forcode{ = .false.}, and a namelist block \nam{bdy\_index} must be included for each set) or read in from a file (\np{ln\_coords\_file}\forcode{ = .true.}, and a ``\ifile{coordinates.bdy}'' file must be provided).
+(\np{ln\_coords\_file}\forcode{=.false.}, and a namelist block \nam{bdy\_index} must be included for each set) or read in from a file (\np{ln\_coords\_file}\forcode{=.true.}, and a ``\ifile{coordinates.bdy}'' file must be provided).
 The coordinates.bdy file is analagous to the usual \NEMO\ ``\ifile{coordinates}'' file.
 In the example above, there are two boundary sets, the first of which is defined via a file and
@@ -389,5 +389,5 @@
 (``u2d'':sea-surface height and barotropic velocities), for the baroclinic velocities (``u3d''),
 for the active tracers \footnote{The BDY module does not deal with passive tracers at this version} (``tra''), and for sea-ice (``ice'').
-For each set of variables one has to choose an algorithm and the boundary data (set resp. by \np{cn\_tra} and \np{cn\_tra} for tracers).\\
+For each set of variables one has to choose an algorithm and the boundary data (set resp. by \np{cn\_tra} and \np{nn\_tra\_dta} for tracers).\\
 
 The choice of algorithm is currently as follows:
@@ -405,9 +405,9 @@
 
 The boundary data is either set to initial conditions
-(\np{nn\_tra\_dta}\forcode{ = 0}) or forced with external data from a file (\np{nn\_tra\_dta}\forcode{ = 1}).
+(\np{nn\_tra\_dta}\forcode{=0}) or forced with external data from a file (\np{nn\_tra\_dta}\forcode{=1}).
 In case the 3d velocity data contain the total velocity (ie, baroclinic and barotropic velocity),
-the bdy code can derived baroclinic and barotropic velocities by setting \np{ln\_full\_vel}\forcode{ = .true. }
+the bdy code can derived baroclinic and barotropic velocities by setting \np{ln\_full\_vel}\forcode{=.true.}
 For the barotropic solution there is also the option to use tidal harmonic forcing either by
-itself (\np{nn\_dyn2d\_dta}\forcode{ = 2}) or in addition to other external data (\np{nn\_dyn2d\_dta}\forcode{ = 3}).\\
+itself (\np{nn\_dyn2d\_dta}\forcode{=2}) or in addition to other external data (\np{nn\_dyn2d\_dta}\forcode{=3}).\\
 If not set to initial conditions, sea-ice salinity, temperatures and melt ponds data at the boundary can either be read in a file or defined as constant (by \np{rn\_ice\_sal}, \np{rn\_ice\_tem}, \np{rn\_ice\_apnd}, \np{rn\_ice\_hpnd}). Ice age is constant and defined by \np{rn\_ice\_age}.
 
@@ -424,5 +424,5 @@
 
 There is currently an option to vertically interpolate the open boundary data onto the native grid at run-time.
-If \np{nn\_bdy\_jpk} $< -1$, it is assumed that the lateral boundary data are already on the native grid.
+If \np{nn\_bdy\_jpk}$<-1$, it is assumed that the lateral boundary data are already on the native grid.
 However, if \np{nn\_bdy\_jpk} is set to the number of vertical levels present in the boundary data,
 a bilinear interpolation onto the native grid will be triggered at runtime.
@@ -583,5 +583,5 @@
 \jp{jpinft} give the start and end $i$ indices for each segment with similar for the other boundaries.
 These segments define a list of $T$ grid points along the outermost row of the boundary ($nbr\,=\, 1$).
-The code deduces the $U$ and $V$ points and also the points for $nbr\,>\, 1$ if \np{nn\_rimwidth}\forcode{ > 1}.
+The code deduces the $U$ and $V$ points and also the points for $nbr\,>\, 1$ if \np{nn\_rimwidth}\forcode{>1}.
 
 The boundary geometry may also be defined from a ``\ifile{coordinates.bdy}'' file.
@@ -659,9 +659,9 @@
 There is an option to force the total volume in the regional model to be constant.
 This is controlled  by the \np{ln\_vol} parameter in the namelist.
-A value of \np{ln\_vol}\forcode{ = .false.} indicates that this option is not used.
+A value of \np{ln\_vol}\forcode{=.false.} indicates that this option is not used.
 Two options to control the volume are available (\np{nn\_volctl}).
-If \np{nn\_volctl}\forcode{ = 0} then a correction is applied to the normal barotropic velocities around the boundary at
+If \np{nn\_volctl}\forcode{=0} then a correction is applied to the normal barotropic velocities around the boundary at
 each timestep to ensure that the integrated volume flow through the boundary is zero.
-If \np{nn\_volctl}\forcode{ = 1} then the calculation of the volume change on
+If \np{nn\_volctl}\forcode{=1} then the calculation of the volume change on
 the timestep includes the change due to the freshwater flux across the surface and
 the correction velocity corrects for this as well.
