# Changeset 11537

Ignore:
Timestamp:
2019-09-12T10:24:48+02:00 (13 months ago)
Message:

make sure SI3 doc can be compiled, plus small edits

Location:
NEMO/trunk/doc/latex
Files:
26 edited
1 moved

Unmodified
Removed
• ## NEMO/trunk/doc/latex/NEMO/subfiles/chap_ASM.tex

 r11435 Typically the increments are spread evenly over the full window. In addition, two different weighting functions have been implemented. The first function (namelist option \np{niaufn} = 0) employs constant weights, The first function (namelist option \np{niaufn}=0) employs constant weights, \begin{align} \label{eq:F1_i} \end{align} where $M = m-n$. The second function (namelist option \np{niaufn} = 1) employs peaked hat-like weights in order to give maximum weight in the centre of the sub-window, The second function (namelist option \np{niaufn}=1) employs peaked hat-like weights in order to give maximum weight in the centre of the sub-window, with the weighting reduced linearly to a small value at the window end-points: \begin{align}
• ## NEMO/trunk/doc/latex/NEMO/subfiles/chap_CONFIG.tex

 r11435 The GYRE configuration is set like an analytical configuration. Through \np{ln\_read\_cfg}\forcode{ = .false.} in \nam{cfg} namelist defined in Through \np{ln\_read\_cfg}\forcode{=.false.} in \nam{cfg} namelist defined in the reference configuration \path{./cfgs/GYRE_PISCES/EXPREF/namelist_cfg} analytical definition of grid in GYRE is done in usrdef\_hrg, usrdef\_zgr routines. Obviously, the namelist parameters have to be adjusted to the chosen resolution, see the Configurations pages on the \NEMO\ web site (\NEMO\ Configurations). In the vertical, GYRE uses the default 30 ocean levels (\jp{jpk}\forcode{ = 31}) (\autoref{fig:zgr}). In the vertical, GYRE uses the default 30 ocean levels (\jp{jpk}\forcode{=31}) (\autoref{fig:zgr}). The GYRE configuration is also used in benchmark test as it is very simple to increase its resolution and For example, keeping a same model size on each processor while increasing the number of processor used is very easy, even though the physical integrity of the solution can be compromised. Benchmark is activate via \np{ln\_bench}\forcode{ = .true.} in \nam{usr\_def} in Benchmark is activate via \np{ln\_bench}\forcode{=.true.} in \nam{usr\_def} in namelist \path{./cfgs/GYRE_PISCES/EXPREF/namelist_cfg}.

• ## NEMO/trunk/doc/latex/NEMO/subfiles/chap_model_basics_zstar.tex

 r11435 The default value is 1, as recommended by \citet{Roullet2000?} \colorbox{red}{\np{rnu}\forcode{ = 1} to be suppressed from namelist !} \colorbox{red}{\np{rnu}\forcode{=1} to be suppressed from namelist !} %-------------------------------------------------------------
• ## NEMO/trunk/doc/latex/NEMO/subfiles/chap_time_domain.tex

 r11435 where the subscript $F$ denotes filtered values and $\gamma$ is the Asselin coefficient. $\gamma$ is initialized as \np{rn\_atfp} (namelist parameter). Its default value is \np{rn\_atfp}\forcode{ = 10.e-3} (see \autoref{sec:STP_mLF}), Its default value is \np{rn\_atfp}\forcode{=10.e-3} (see \autoref{sec:STP_mLF}), causing only a weak dissipation of high frequency motions (\citep{farge-coulombier_phd87}). The addition of a time filter degrades the accuracy of the calculation from second to first order. The leapfrog environment supports a centred in time computation of the surface pressure, \ie\ evaluated at \textit{now} time step. This refers to as the explicit free surface case in the code (\np{ln\_dynspg\_exp}\forcode{ = .true.}). at \textit{now} time step. This refers to as the explicit free surface case in the code (\np{ln\_dynspg\_exp}\forcode{=.true.}). This choice however imposes a strong constraint on the time step which should be small enough to resolve the propagation of external gravity waves. As a matter of fact, one rather use in a realistic setup, a split-explicit free surface (\np{ln\_dynspg\_ts}\forcode{ = .true.}) in which barotropic and baroclinic dynamical equations are solved separately with ad-hoc (\np{ln\_dynspg\_ts}\forcode{=.true.}) in which barotropic and baroclinic dynamical equations are solved separately with ad-hoc time steps. The use of the time-splitting (in combination with non-linear free surface) imposes some constraints on the design of the overall flowchart, in particular to ensure exact tracer conservation (see \autoref{fig:TimeStep_flowchart}).
• ## NEMO/trunk/doc/latex/SI3/main/chapters.tex

 r11171 \subfile{../subfiles/todolist} \subfile{../subfiles/introduction}               % Introduction \subfile{../subfiles/chap_model_basics}
• ## NEMO/trunk/doc/latex/SI3/main/definitions.tex

 r11433 %% Color for document (frontpage banner, links and chapter boxes) \def \setcolor{ \definecolor{manualcolor}{cmyk}{0, 0, 0, 0.4} } \def \setmanualcolor{ \definecolor{manualcolor}{cmyk}{0, 0, 0, 0.4} } %% IPSL publication number
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_bdy_agrif.tex

 r11015 \chapter{BDY and AGRIF with SI$^3$} \label{chap:REG} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_domain.tex

 r11031 \chapter{Time, space and thickness space domain} \label{chap:DOM} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_dynamics.tex

 r11015 \chapter{Ice dynamics} \label{chap:DYN} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_interfaces.tex

 r11015 \chapter{Ice-atmosphere and ice-ocean interfaces} \label{chap:INT} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_miscellaneous.tex

 r11015 \chapter{Miscellaneous topics} \label{chap:MIS} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_model_basics.tex

 r11043 \chapter{Model Basics} \label{chap:MB} \minitoc \chaptertoc \newpage
• ## NEMO/trunk/doc/latex/SI3/subfiles/chap_output_diagnostics.tex

 r11031 \chapter{Output and diagnostics} \label{chap:DIA} \minitoc \chaptertoc \newpage