Index: /NEMO/branches/2019/dev_r11643_ENHANCE-11_CEthe_Shaconemo_diags/cfgs/ORCA2_OFF_PISCES/EXPREF/file_def_nemo-pisces.xml
===================================================================
--- /NEMO/branches/2019/dev_r11643_ENHANCE-11_CEthe_Shaconemo_diags/cfgs/ORCA2_OFF_PISCES/EXPREF/file_def_nemo-pisces.xml	(revision 12008)
+++ /NEMO/branches/2019/dev_r11643_ENHANCE-11_CEthe_Shaconemo_diags/cfgs/ORCA2_OFF_PISCES/EXPREF/file_def_nemo-pisces.xml	(revision 12008)
@@ -0,0 +1,145 @@
+<?xml version="1.0"?>
+    <!-- 
+============================================================================================================
+=                                           output files definition                                        =
+=                                            Define your own files                                         =
+=                                         put the variables you want...                                    =
+============================================================================================================
+    -->
+
+   <file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4">
+    
+      <file_group id="1ts" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
+      <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."/> <!-- 1h files -->
+      <file_group id="2h" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files -->
+      <file_group id="3h" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->     
+      <file_group id="4h" output_freq="4h"  output_level="10" enabled=".TRUE."/> <!-- 4h files -->
+      <file_group id="6h" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files -->
+     
+      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."> <!-- 1d files -->
+        <file id="file1" name_suffix="_bioscalar" description="pisces sms variables" >
+           <field field_ref="tdenit"   name="tdenit"    unit="TgN/yr" operation="instant" > tdenit * 14. * 86400. * 365. / 1e12 </field>
+           <field field_ref="tnfix"    name="tnfix"     unit="TgN/yr" operation="instant" > tnfix * 14. * 86400. * 365. / 1e12 </field>
+           <field field_ref="tcflx"    name="tcflx"     unit="PgC/yr" operation="instant" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field>
+           <field field_ref="tcflxcum" name="tcflxcum"  unit="PgC"    operation="instant" > tcflxcum * -1. * 12. / 1e15 </field>
+           <field field_ref="tcexp"    name="tcexp"     unit="PgC/yr" operation="instant" > tcexp * 12. * 86400. * 365. / 1e15 </field>
+           <field field_ref="tintpp"   name="tintpp"    unit="PgC/yr" operation="instant" > tintpp * 12. * 86400. * 365. / 1e15 </field>
+           <field field_ref="pno3tot"  name="pno3tot"   unit="umolN"  > pno3tot * 16. / 122. * 1e6 </field>
+           <field field_ref="ppo4tot"  name="ppo4tot"   unit="umolP"  > ppo4tot * 1. / 122. * 1e6 </field>
+           <field field_ref="psiltot"  name="psiltot"   unit="umolC"  > psiltot * 1e6  </field>
+           <field field_ref="palktot"  name="palktot"   unit="umolC"  > palktot * 1e6  </field>
+           <field field_ref="pfertot"  name="pfertot"   unit="nmolFe" > pfertot * 1e9  </field>
+        </file>
+      </file_group>
+
+      <file_group id="3d" output_freq="3d"  output_level="10" enabled=".TRUE."/> <!-- 3d files -->    
+      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE."/>  <!-- 5d files -->   
+
+      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
+
+	<file id="file2" name_suffix="_ptrc_T" description="pisces sms variables" >
+          <field field_ref="DIC"      />
+          <field field_ref="Alkalini" />
+          <field field_ref="O2"       />
+          <field field_ref="PO4"      />
+          <field field_ref="Si"       />
+          <field field_ref="Fer"      />
+          <field field_ref="NCHL"     />
+          <field field_ref="DCHL"     />
+          <field field_ref="NO3"      />
+	</file>
+	
+	<file id="file3" name_suffix="_diad_T" description="additional pisces diagnostics" >
+          <field field_ref="Cflx"     />
+          <field field_ref="Dpco2"    />
+	</file>
+
+      </file_group>
+      <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
+      <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
+      <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
+      <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
+
+      <file_group id="1y"  output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files -->
+
+	<file id="file4" name_suffix="_ptrc_T" description="pisces sms variables" >
+          <field field_ref="DIC"      />
+          <field field_ref="Alkalini" />
+          <field field_ref="O2"       />
+          <field field_ref="CaCO3"    />
+          <field field_ref="PO4"      />
+          <field field_ref="POC"      />
+          <field field_ref="Si"       />
+          <field field_ref="PHY"      />
+          <field field_ref="ZOO"      />
+          <field field_ref="DOC"      />
+          <field field_ref="PHY2"     />
+          <field field_ref="ZOO2"     />
+          <field field_ref="DSi"      />
+          <field field_ref="Fer"      />
+          <field field_ref="BFe"      />
+          <field field_ref="GOC"      />
+          <field field_ref="SFe"      />
+          <field field_ref="DFe"      />
+          <field field_ref="GSi"      />
+          <field field_ref="NFe"      />
+          <field field_ref="NCHL"     />
+          <field field_ref="DCHL"     />
+          <field field_ref="NO3"      />
+          <field field_ref="NH4"      />
+	</file>
+
+	<file id="file5" name_suffix="_diad_T" description="additional pisces diagnostics" >
+          <field field_ref="PH"       />
+          <field field_ref="CO3"      />
+          <field field_ref="CO3sat"   />
+          <field field_ref="PAR"      />
+          <field field_ref="PPPHYN"    />
+          <field field_ref="PPPHYD"   />
+          <field field_ref="PPNEWN"   />
+          <field field_ref="PPNEWD"   />
+          <field field_ref="PBSi"     />
+          <field field_ref="PFeN"     />
+          <field field_ref="PFeD"     />
+          <field field_ref="xfracal"  />
+          <field field_ref="PCAL"     />
+          <field field_ref="DCAL"     />
+          <field field_ref="GRAZ1"    />
+          <field field_ref="GRAZ2"    />
+          <field field_ref="EPC100"   />
+          <field field_ref="EPFE100"  />
+          <field field_ref="EPSI100"  />
+          <field field_ref="EPCAL100" />
+          <field field_ref="Cflx"     />
+          <field field_ref="Oflx"     />
+          <field field_ref="Kg"       />
+          <field field_ref="Dpco2"    />
+          <field field_ref="Dpo2"     />
+          <field field_ref="Heup"     />
+          <field field_ref="Irondep"  />
+          <field field_ref="Ironsed"  />
+          <field field_ref="Ironice"  />
+          <field field_ref="Nfix"     />
+          <field field_ref="MuN"      />
+          <field field_ref="MuD"      />
+          <field field_ref="LNnut"    />
+          <field field_ref="LDnut"    />
+          <field field_ref="LNFe"     />
+          <field field_ref="LDFe"     />
+          <field field_ref="LNlight"  />
+          <field field_ref="LDlight"  />
+          <field field_ref="pdust"    />
+          <field field_ref="Fe3"      />
+          <field field_ref="FeL1"     />
+          <field field_ref="TL1"      />
+          <field field_ref="Sdenit"   />
+          <field field_ref="Totlig"   />
+	</file>
+
+      </file_group>
+      <file_group id="2y"  output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
+      <file_group id="5y"  output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
+      <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
+
+   </file_definition>
+
Index: MO/branches/2019/dev_r11643_ENHANCE-11_CEthe_Shaconemo_diags/cfgs/ORCA2_OFF_TRC/EXPREF/file_def_nemo-pisces.xml
===================================================================
--- /NEMO/branches/2019/dev_r11643_ENHANCE-11_CEthe_Shaconemo_diags/cfgs/ORCA2_OFF_TRC/EXPREF/file_def_nemo-pisces.xml	(revision 12007)
+++ 	(revision )
@@ -1,145 +1,0 @@
-<?xml version="1.0"?>
-    <!-- 
-============================================================================================================
-=                                           output files definition                                        =
-=                                            Define your own files                                         =
-=                                         put the variables you want...                                    =
-============================================================================================================
-    -->
-
-   <file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4">
-    
-      <file_group id="1ts" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
-      <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."/> <!-- 1h files -->
-      <file_group id="2h" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files -->
-      <file_group id="3h" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->     
-      <file_group id="4h" output_freq="4h"  output_level="10" enabled=".TRUE."/> <!-- 4h files -->
-      <file_group id="6h" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files -->
-     
-      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."> <!-- 1d files -->
-        <file id="file1" name_suffix="_bioscalar" description="pisces sms variables" >
-           <field field_ref="tdenit"   name="tdenit"    unit="TgN/yr" operation="instant" > tdenit * 14. * 86400. * 365. / 1e12 </field>
-           <field field_ref="tnfix"    name="tnfix"     unit="TgN/yr" operation="instant" > tnfix * 14. * 86400. * 365. / 1e12 </field>
-           <field field_ref="tcflx"    name="tcflx"     unit="PgC/yr" operation="instant" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field>
-           <field field_ref="tcflxcum" name="tcflxcum"  unit="PgC"    operation="instant" > tcflxcum * -1. * 12. / 1e15 </field>
-           <field field_ref="tcexp"    name="tcexp"     unit="PgC/yr" operation="instant" > tcexp * 12. * 86400. * 365. / 1e15 </field>
-           <field field_ref="tintpp"   name="tintpp"    unit="PgC/yr" operation="instant" > tintpp * 12. * 86400. * 365. / 1e15 </field>
-           <field field_ref="pno3tot"  name="pno3tot"   unit="umolN"  > pno3tot * 16. / 122. * 1e6 </field>
-           <field field_ref="ppo4tot"  name="ppo4tot"   unit="umolP"  > ppo4tot * 1. / 122. * 1e6 </field>
-           <field field_ref="psiltot"  name="psiltot"   unit="umolC"  > psiltot * 1e6  </field>
-           <field field_ref="palktot"  name="palktot"   unit="umolC"  > palktot * 1e6  </field>
-           <field field_ref="pfertot"  name="pfertot"   unit="nmolFe" > pfertot * 1e9  </field>
-        </file>
-      </file_group>
-
-      <file_group id="3d" output_freq="3d"  output_level="10" enabled=".TRUE."/> <!-- 3d files -->    
-      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE."/>  <!-- 5d files -->   
-
-      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
-
-	<file id="file2" name_suffix="_ptrc_T" description="pisces sms variables" >
-          <field field_ref="DIC"      />
-          <field field_ref="Alkalini" />
-          <field field_ref="O2"       />
-          <field field_ref="PO4"      />
-          <field field_ref="Si"       />
-          <field field_ref="Fer"      />
-          <field field_ref="NCHL"     />
-          <field field_ref="DCHL"     />
-          <field field_ref="NO3"      />
-	</file>
-	
-	<file id="file3" name_suffix="_diad_T" description="additional pisces diagnostics" >
-          <field field_ref="Cflx"     />
-          <field field_ref="Dpco2"    />
-	</file>
-
-      </file_group>
-      <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
-      <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
-      <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
-      <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
-
-      <file_group id="1y"  output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files -->
-
-	<file id="file4" name_suffix="_ptrc_T" description="pisces sms variables" >
-          <field field_ref="DIC"      />
-          <field field_ref="Alkalini" />
-          <field field_ref="O2"       />
-          <field field_ref="CaCO3"    />
-          <field field_ref="PO4"      />
-          <field field_ref="POC"      />
-          <field field_ref="Si"       />
-          <field field_ref="PHY"      />
-          <field field_ref="ZOO"      />
-          <field field_ref="DOC"      />
-          <field field_ref="PHY2"     />
-          <field field_ref="ZOO2"     />
-          <field field_ref="DSi"      />
-          <field field_ref="Fer"      />
-          <field field_ref="BFe"      />
-          <field field_ref="GOC"      />
-          <field field_ref="SFe"      />
-          <field field_ref="DFe"      />
-          <field field_ref="GSi"      />
-          <field field_ref="NFe"      />
-          <field field_ref="NCHL"     />
-          <field field_ref="DCHL"     />
-          <field field_ref="NO3"      />
-          <field field_ref="NH4"      />
-	</file>
-
-	<file id="file5" name_suffix="_diad_T" description="additional pisces diagnostics" >
-          <field field_ref="PH"       />
-          <field field_ref="CO3"      />
-          <field field_ref="CO3sat"   />
-          <field field_ref="PAR"      />
-          <field field_ref="PPPHYN"    />
-          <field field_ref="PPPHYD"   />
-          <field field_ref="PPNEWN"   />
-          <field field_ref="PPNEWD"   />
-          <field field_ref="PBSi"     />
-          <field field_ref="PFeN"     />
-          <field field_ref="PFeD"     />
-          <field field_ref="xfracal"  />
-          <field field_ref="PCAL"     />
-          <field field_ref="DCAL"     />
-          <field field_ref="GRAZ1"    />
-          <field field_ref="GRAZ2"    />
-          <field field_ref="EPC100"   />
-          <field field_ref="EPFE100"  />
-          <field field_ref="EPSI100"  />
-          <field field_ref="EPCAL100" />
-          <field field_ref="Cflx"     />
-          <field field_ref="Oflx"     />
-          <field field_ref="Kg"       />
-          <field field_ref="Dpco2"    />
-          <field field_ref="Dpo2"     />
-          <field field_ref="Heup"     />
-          <field field_ref="Irondep"  />
-          <field field_ref="Ironsed"  />
-          <field field_ref="Ironice"  />
-          <field field_ref="Nfix"     />
-          <field field_ref="MuN"      />
-          <field field_ref="MuD"      />
-          <field field_ref="LNnut"    />
-          <field field_ref="LDnut"    />
-          <field field_ref="LNFe"     />
-          <field field_ref="LDFe"     />
-          <field field_ref="LNlight"  />
-          <field field_ref="LDlight"  />
-          <field field_ref="pdust"    />
-          <field field_ref="Fe3"      />
-          <field field_ref="FeL1"     />
-          <field field_ref="TL1"      />
-          <field field_ref="Sdenit"   />
-          <field field_ref="Totlig"   />
-	</file>
-
-      </file_group>
-      <file_group id="2y"  output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
-      <file_group id="5y"  output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
-      <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
-
-   </file_definition>
-
