Changeset 12525
- Timestamp:
- 2020-03-09T14:42:50+01:00 (4 years ago)
- Location:
- NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs
- Files:
-
- 2 edited
-
ORCA2_OFF_PISCES/EXPREF/namelist_top_cfg (modified) (1 diff)
-
SHARED/namelist_pisces_ref (modified) (9 diffs)
Legend:
- Unmodified
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NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/ORCA2_OFF_PISCES/EXPREF/namelist_top_cfg
r11536 r12525 99 99 &namtrc_ice ! Representation of sea ice growth & melt effects 100 100 !----------------------------------------------------------------------- 101 nn_ice_tr = 0 ! tracer concentration in sea ice set to 0 101 102 / 102 103 !----------------------------------------------------------------------- -
NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/SHARED/namelist_pisces_ref
r12348 r12525 87 87 !----------------------------------------------------------------------- 88 88 concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton 89 concpno3 = 8e-7 89 concpno3 = 8e-7 ! Nitrate half saturation of picophytoplankton 90 90 concdno3 = 5E-6 ! Phosphate half saturation for diatoms 91 91 concnnh4 = 1E-6 ! NH4 half saturation for phyto 92 concpnh4 = 2.3E-7 92 concpnh4 = 2.3E-7 ! NH4 half saturation for picophytoplankton 93 93 concdnh4 = 1.7E-6 ! NH4 half saturation for diatoms 94 94 concnpo4 = 3E-6 ! PO4 half saturation for phyto 95 concppo4 = 8E-7 95 concppo4 = 8E-7 ! PO4 half saturation for picophytoplankton 96 96 concdpo4 = 5E-6 ! PO4 half saturation for diatoms 97 concnfer = 3E-9 ! Iron half saturation for phyto98 concpfer = 8E-10 99 concdfer = 5E-9 ! Iron half saturation for diatoms97 concnfer = 3E-9 ! Iron half saturation for phyto 98 concpfer = 8E-10 ! Iron half saturation for picophytoplankton 99 concdfer = 5E-9 ! Iron half saturation for diatoms 100 100 concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria 101 101 concbnh4 = 1.E-7 ! NH4 half saturation for phyto … … 109 109 xsizerd = 4.0 ! Size ratio for diatoms 110 110 xksi1 = 8.E-6 ! half saturation constant for Si uptake 111 xksi2 = 20E-6 ! half saturation constant for Si/C111 xksi2 = 20E-6 ! half saturation constant for Si/C 112 112 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 113 113 caco3r = 0.5 ! mean rain ratio … … 182 182 &namp4zmort ! parameters for phytoplankton sinks for PISCES std - ln_p4z 183 183 !----------------------------------------------------------------------- 184 wchl 184 wchln = 0.01 ! quadratic mortality of phytoplankton 185 185 wchld = 0.01 ! maximum quadratic mortality of diatoms 186 186 wchldm = 0.03 ! maximum quadratic mortality of diatoms 187 mprat 188 mprat 2= 0.01 ! Diatoms mortality rate187 mpratn = 0.01 ! phytoplankton mortality rate 188 mpratd = 0.01 ! Diatoms mortality rate 189 189 / 190 190 !----------------------------------------------------------------------- … … 221 221 unass2 = 0.3 ! non assimilated fraction of P by mesozoo 222 222 grazflux = 3.e3 ! flux-feeding rate 223 ln_dvm_meso = .false. ! Activates DVM for mesozooplankton 224 xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM 223 225 / 224 226 !----------------------------------------------------------------------- 225 227 &namp5zmes ! parameters for mesozooplankton 226 228 !----------------------------------------------------------------------- 227 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 228 grazrat2 = 0.75 ! maximal mesozoo grazing rate 229 bmetexc2 = .true. ! Metabolic use of excess carbon 230 resrat2 = 0.005 ! exsudation rate of mesozooplankton 231 mzrat2 = 0.03 ! mesozooplankton mortality rate 232 xpref2d = 1. ! zoo preference for phyto 233 xpref2n = 0.3 ! zoo preference for nano 234 xpref2z = 1. ! zoo preference for zoo 235 xpref2m = 0.1 ! meso preference for zoo 236 xpref2c = 0.3 ! zoo preference for poc 237 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 238 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 239 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 240 xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton 241 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 242 xthresh2 = 3E-7 ! Food threshold for grazing 243 xkgraz2 = 20.E-6 ! half sturation constant for meso grazing 244 epsher2 = 0.5 ! Efficicency of Mesozoo growth 245 epsher2min = 0.5 ! Minimum efficiency of mesozoo growth 246 ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM 247 srespir2 = 0.2 ! Active respiration 248 unass2c = 0.3 ! non assimilated fraction of P by mesozoo 249 unass2n = 0.3 ! non assimilated fraction of N by mesozoo 250 unass2p = 0.3 ! non assimilated fraction of P by mesozoo 251 grazflux = 3.e3 ! flux-feeding rate 229 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 230 grazrat2 = 0.75 ! maximal mesozoo grazing rate 231 bmetexc2 = .true. ! Metabolic use of excess carbon 232 resrat2 = 0.005 ! exsudation rate of mesozooplankton 233 mzrat2 = 0.03 ! mesozooplankton mortality rate 234 xpref2d = 1. ! meso preference for diatoms 235 xpref2n = 0.3 ! meso preference for nano 236 xpref2z = 1. ! meso preference for zoo 237 xpref2m = 0.1 ! meso preference for zoo 238 xpref2c = 0.3 ! meso preference for poc 239 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 240 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 241 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 242 xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton 243 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 244 xthresh2 = 3E-7 ! Food threshold for grazing 245 xkgraz2 = 20.E-6 ! half sturation constant for meso grazing 246 epsher2 = 0.5 ! Efficicency of Mesozoo growth 247 epsher2min = 0.5 ! Minimum efficiency of mesozoo growth 248 ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM 249 srespir2 = 0.2 ! Active respiration 250 unass2c = 0.3 ! non assimilated fraction of C by mesozoo 251 unass2n = 0.3 ! non assimilated fraction of N by mesozoo 252 unass2p = 0.3 ! non assimilated fraction of P by mesozoo 253 grazflux = 3.e3 ! flux-feeding rate 254 ln_dvm_meso = .false. ! Activates DVM for mesozooplankton 255 xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM 252 256 / 253 257 !----------------------------------------------------------------------- … … 286 290 xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton 287 291 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton 288 xthreshpic = 1.E-8 289 xthreshzoo = 1.E-8 ! Nanophyto feeding threshold for microzooplankton292 xthreshpic = 1.E-8 ! Picophyto feeding threshold for microzooplankton 293 xthreshzoo = 1.E-8 ! Microzoo feeding threshold for microzooplankton 290 294 xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton 291 295 xthresh = 3.E-7 ! Food threshold for feeding 292 xkgraz = 20.E-6 ! half s turation constant for grazing296 xkgraz = 20.E-6 ! half saturation constant for grazing 293 297 epsher = 0.5 ! Efficiency of microzoo growth 294 298 epshermin = 0.5 ! Minimum efficiency of microzoo growth … … 296 300 srespir = 0.2 ! Active respiration 297 301 unassc = 0.3 ! non assimilated fraction of C by zoo 298 unassn = 0.3 ! non assimilated fraction of Cby zoo299 unassp = 0.3 ! non assimilated fraction of Cby zoo302 unassn = 0.3 ! non assimilated fraction of N by zoo 303 unassp = 0.3 ! non assimilated fraction of P by zoo 300 304 / 301 305 !----------------------------------------------------------------------- 302 306 &nampisfer ! parameters for iron chemistry 303 307 !----------------------------------------------------------------------- 304 ln_ligvar = .false. 305 xlam1 = 0.005 ! scavenging rate of Iron 306 xlamdust = 150.0 ! Scavenging rate of dust308 ln_ligvar = .false. ! variable ligand concentration 309 xlam1 = 0.005 ! scavenging rate of Iron by biogenic particles 310 xlamdust = 150.0 ! Scavenging rate of Iron by dust 307 311 ligand = 0.7E-9 ! Ligands concentration 308 312 kfep = 0.01 ! Nanoparticle formation rate constant … … 322 326 xremikn = 0.3 ! remineralization rate of DON 323 327 xremikp = 0.4 ! remineralization rate of DOP 324 ! feratb = 40E-6 ! Bacterial Fe/C ratio328 ! feratb = 20E-6 ! Bacterial Fe/C ratio 325 329 ! xkferb = 3E-10 ! Half-saturation constant for bact. Fe/C 326 330 / … … 328 332 &nampispoc ! parameters for organic particles 329 333 !----------------------------------------------------------------------- 330 xremip = 0.035 ! remineralisation rate of PO N334 xremip = 0.035 ! remineralisation rate of POC 331 335 jcpoc = 15 ! Number of lability classes 332 336 rshape = 1.0 ! Shape of the gamma function … … 384 388 &nampislig ! Namelist parameters for ligands, nampislig 385 389 !----------------------------------------------------------------------- 386 rlgw = 100. ! Lifetime (years) of weak ligands390 rlgw = 200. ! Lifetime (years) of weak ligands 387 391 rlig = 1.E-4 ! Remin ligand production per unit C 388 prlgw = 1.E-4 ! Photolysis of weak ligand392 prlgw = 5.E-4 ! Photolysis of weak ligand 389 393 rlgs = 1. ! Lifetime (years) of strong ligands 394 xklig = 1.E-9 ! 1/2 saturation constant of photolysis 390 395 / 391 396 !-----------------------------------------------------------------------
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