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Changeset 13234 for NEMO – NEMO

Changeset 13234 for NEMO


Ignore:
Timestamp:
2020-07-02T20:40:58+02:00 (4 years ago)
Author:
aumont
Message:

slight change in the namelist PISCES

Location:
NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA
Files:
4 edited

Legend:

Unmodified
Added
Removed

  • NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/SHARED/namelist_pisces_ref

    r12759 r13234  
    202202&namp4zmes     !   parameters for mesozooplankton for PISCES std       - ln_p4z 
    203203!----------------------------------------------------------------------- 
     204   part2       =  0.75     ! part of calcite not dissolved in mesozoo guts 
     205   grazrat2    =  0.5      ! maximal mesozoo grazing rate 
     206   resrat2     =  0.005    ! exsudation rate of mesozooplankton 
     207   mzrat2      =  0.02     ! mesozooplankton mortality rate 
     208   xpref2d     =  1.       ! mesozoo preference for diatoms 
     209   xpref2n     =  0.3      ! mesozoo preference for nanophyto. 
     210   xpref2z     =  1.       ! mesozoo preference for microzoo. 
     211   xpref2c     =  0.3      ! mesozoo preference for poc 
     212   xthresh2zoo = 1E-8      ! zoo feeding threshold for mesozooplankton  
     213   xthresh2dia = 1E-8      ! diatoms feeding threshold for mesozooplankton  
     214   xthresh2phy = 1E-8      ! nanophyto feeding threshold for mesozooplankton  
     215   xthresh2poc = 1E-8      ! poc feeding threshold for mesozooplankton  
     216   xthresh2    =  3E-7     ! Food threshold for grazing 
     217   xkgraz2     =  20.E-6   ! half saturation constant for meso grazing 
     218   epsher2     =  0.35     ! Efficicency of Mesozoo growth 
     219   epsher2min  =  0.35     ! Minimum efficiency of mesozoo growth 
     220   sigma2      =  0.6      ! Fraction of mesozoo excretion as DOM 
     221   unass2      =  0.3      ! non assimilated fraction of P by mesozoo 
     222   grazflux    =  3.e3     ! flux-feeding rate 
     223   ln_dvm_meso = .false.   ! Activates DVM for mesozooplankton 
     224   xfracmig    = 0.3       ! Fraction of mesozooplankton performing DVM 
     225/ 
     226!----------------------------------------------------------------------- 
     227&namp5zmes     !   parameters for mesozooplankton 
     228!----------------------------------------------------------------------- 
    204229   part2      =  0.75     ! part of calcite not dissolved in mesozoo guts 
    205    grazrat2   =  0.55     ! maximal mesozoo grazing rate 
    206    resrat2    =  0.005    ! Linear mortality rate of mesozooplankton 
    207    mzrat2     =  0.025    ! mesozooplankton mortality rate 
    208    xpref2d    =  1.       ! mesozoo preference for diatoms 
    209    xpref2n    =  0.3      ! mesozoo preference for nanophyto. 
    210    xpref2z    =  1.       ! mesozoo preference for microzoo. 
    211    xpref2c    =  0.3      ! mesozoo preference for poc 
    212    xthresh2zoo = 1E-8     ! zoo feeding threshold for mesozooplankton  
    213    xthresh2dia = 1E-8     ! diatoms feeding threshold for mesozooplankton  
    214    xthresh2phy = 1E-8     ! nanophyto feeding threshold for mesozooplankton  
    215    xthresh2poc = 1E-8     ! poc feeding threshold for mesozooplankton  
    216    xthresh2   =  3E-7     ! Food threshold for grazing 
    217    xkgraz2    =  20.E-6   ! half saturation constant for meso grazing 
    218    epsher2    =  0.35     ! Efficicency of Mesozoo growth 
    219    epsher2min =  0.35     ! Minimum efficiency of mesozoo growth 
    220    sigma2     =  0.6      ! Fraction of mesozoo excretion as DOM 
    221    unass2     =  0.3      ! non assimilated fraction of P by mesozoo 
     230   grazrat2   =  0.75     ! maximal mesozoo grazing rate 
     231   bmetexc2   =  .true.   ! Metabolic use of excess carbon  
     232   resrat2    =  0.005    ! exsudation rate of mesozooplankton 
     233   mzrat2     =  0.03     ! mesozooplankton mortality rate 
     234   xpref2d    =  1.       ! meso preference for diatoms 
     235   xpref2n    =  0.3      ! meso preference for nano 
     236   xpref2z    =  1.       ! meso preference for zoo 
     237   xpref2m    =  0.1      ! meso preference for zoo 
     238   xpref2c    =  0.3      ! meso preference for poc 
     239   xthresh2zoo = 1E-8     ! zoo feeding threshold for mesozooplankton 
     240   xthresh2dia = 1E-8     ! diatoms feeding threshold for mesozooplankton 
     241   xthresh2phy = 1E-8     ! nanophyto feeding threshold for mesozooplankton 
     242   xthresh2mes = 1E-8     ! meso feeding threshold for mesozooplankton 
     243   xthresh2poc = 1E-8     ! poc feeding threshold for mesozooplankton 
     244   xthresh2    =  3E-7    ! Food threshold for grazing 
     245   xkgraz2     =  20.E-6  ! half sturation constant for meso grazing 
     246   epsher2     =  0.5     ! Efficicency of Mesozoo growth 
     247   epsher2min  =  0.5     ! Minimum efficiency of mesozoo growth 
     248   ssigma2     =  0.5     ! Fraction excreted as semi-labile DOM 
     249   srespir2    =  0.2     ! Active respiration 
     250   unass2c     =  0.3     ! non assimilated fraction of C by mesozoo 
     251   unass2n     =  0.3     ! non assimilated fraction of N by mesozoo 
     252   unass2p     =  0.3     ! non assimilated fraction of P by mesozoo 
    222253   grazflux   =  3.e3     ! flux-feeding rate 
    223    ln_dvm_meso = .false.  ! Activates DVM for mesozooplankton 
    224    xfracmig    = 0.3      ! Fraction of mesozooplankton performing DVM 
    225 / 
    226 !----------------------------------------------------------------------- 
    227 &namp5zmes     !   parameters for mesozooplankton 
    228 !----------------------------------------------------------------------- 
    229    part2       = 0.75    ! part of calcite not dissolved in mesozoo guts 
    230    grazrat2    = 0.75    ! maximal mesozoo grazing rate 
    231    bmetexc2    = .true.  ! Metabolic use of excess carbon  
    232    resrat2     = 0.005   ! Linear mortality rate of mesozooplankton 
    233    mzrat2      = 0.03    ! mesozooplankton mortality rate 
    234    xpref2d     = 1.      ! meso preference for diatoms 
    235    xpref2n     = 0.3     ! meso preference for nano 
    236    xpref2z     = 1.      ! meso preference for zoo 
    237    xpref2m     = 0.1     ! meso preference for zoo 
    238    xpref2c     = 0.3     ! meso preference for poc 
    239    xthresh2zoo = 1E-8    ! zoo feeding threshold for mesozooplankton 
    240    xthresh2dia = 1E-8    ! diatoms feeding threshold for mesozooplankton 
    241    xthresh2phy = 1E-8    ! nanophyto feeding threshold for mesozooplankton 
    242    xthresh2mes = 1E-8    ! meso feeding threshold for mesozooplankton 
    243    xthresh2poc = 1E-8    ! poc feeding threshold for mesozooplankton 
    244    xthresh2    = 3E-7    ! Food threshold for grazing 
    245    xkgraz2     = 20.E-6  ! half sturation constant for meso grazing 
    246    epsher2     = 0.5     ! Efficicency of Mesozoo growth 
    247    epsher2min  = 0.5     ! Minimum efficiency of mesozoo growth 
    248    ssigma2     = 0.5     ! Fraction excreted as semi-labile DOM 
    249    srespir2    = 0.2     ! Active respiration 
    250    unass2c     = 0.3     ! non assimilated fraction of C by mesozoo 
    251    unass2n     = 0.3     ! non assimilated fraction of N by mesozoo 
    252    unass2p     = 0.3     ! non assimilated fraction of P by mesozoo 
    253    grazflux    = 3.e3    ! flux-feeding rate 
    254    ln_dvm_meso = .false.  ! Activates DVM for mesozooplankton 
    255    xfracmig    = 0.3      ! Fraction of mesozooplankton performing DVM 
    256254/ 
    257255!----------------------------------------------------------------------- 
    … …  
    281279   grazrat    =  3.0      ! maximal zoo grazing rate 
    282280   bmetexc    =  .true.   ! Metabolic use of excess carbon 
    283    resrat     =  0.03     ! Linear mortality rate of zooplankton 
     281   resrat     =  0.03     ! exsudation rate of zooplankton 
    284282   mzrat      =  0.004    ! zooplankton mortality rate 
    285283   xprefc     =  0.1      ! Microzoo preference for POM 
    … …  
    307305!----------------------------------------------------------------------- 
    308306   ln_ligvar =  .false.   ! variable ligand concentration 
    309    xlam1     =  0.005     ! scavenging rate of Iron by biogenic particles 
     307   xlam1     =  0.005      ! scavenging rate of Iron by biogenic particles 
    310308   xlamdust  =  150.0     ! Scavenging rate of Iron by dust 
    311    ligand    =  0.7E-9    ! Ligands concentration  
     309   ligand    =  7E-10     ! Ligands concentration  
    312310   kfep      =  0.01      ! Nanoparticle formation rate constant 
    313311/ 

  • NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/src/TOP/PISCES/P4Z/p4zmeso.F90

    r13233 r13234  
    474474         &                xpref2c, xthresh2dia, xthresh2phy, xthresh2zoo, xthresh2poc, & 
    475475         &                xthresh2, xkgraz2, epsher2, epsher2min, sigma2, unass2, grazflux, ln_dvm_meso,  & 
    476          &                xfracmig 
     476         &                xsigma2, xsigma2del, xfracmig 
    477477      !!---------------------------------------------------------------------- 
    478478      ! 

  • NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/src/TOP/PISCES/P4Z/p4zmicro.F90

    r13233 r13234  
    300300      NAMELIST/namp4zzoo/ part, grazrat, resrat, mzrat, xprefn, xprefc, & 
    301301         &                xprefd,  xthreshdia,  xthreshphy,  xthreshpoc, & 
    302          &                xthresh, xkgraz, epsher, epshermin, sigma1, unass  & 
     302         &                xthresh, xkgraz, epsher, epshermin, sigma1, unass,  & 
    303303         &                xsigma, xsigmadel 
    304304      !!---------------------------------------------------------------------- 

  • NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/src/TOP/PISCES/P4Z/p5zmeso.F90

    r13233 r13234  
    588588         &                xpref2m, xpref2d, xthresh2dia, xthresh2phy, xthresh2zoo, xthresh2poc, & 
    589589         &                xthresh2mes, xthresh2, xkgraz2, epsher2, epsher2min, ssigma2, unass2c, & 
    590          &                unass2n, unass2p, srespir2, grazflux, ln_dvm_meso, xfracmig 
     590         &                unass2n, unass2p, srespir2, xsigma2, xsigma2del, grazflux, ln_dvm_meso, xfracmig 
    591591      !!---------------------------------------------------------------------- 
    592592      ! 
    … …  
    629629         WRITE(numout,*) '    half sturation constant for grazing 2          xkgraz2     = ', xkgraz2 
    630630         WRITE(numout,*) '    Use excess carbon for respiration              bmetexc2    = ', bmetexc2 
     631         WRITE(numout,*) '      Width of the grazing window                     xsigma2     =', xsigma2 
     632         WRITE(numout,*) '      Maximum additional width of the grazing window  xsigma2del  =', xsigma2del 
    631633         WRITE(numout,*) '      Diurnal vertical migration of mesozoo.         ln_dvm_meso  =', ln_dvm_meso 
    632634         WRITE(numout,*) '      Fractional biomass of meso  that performs DVM  xfracmig     =', xfracmig 
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