Changeset 3653 for branches/2012/dev_LOCEAN_UKMO_2012/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_pisces
- Timestamp:
- 2012-11-26T11:58:31+01:00 (11 years ago)
- File:
-
- 1 edited
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branches/2012/dev_LOCEAN_UKMO_2012/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_pisces
r3418 r3653 40 40 ferat3 = 10.E-6 ! Fe/C in zooplankton 41 41 wsbio2 = 30. ! Big particles sinking speed 42 niter1max = 1 ! Maximum number of iterations for POC 43 niter2max = 1 ! Maximum number of iterations for GOC 42 44 / 43 45 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 44 46 &nampislim ! parameters for nutrient limitations 45 47 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 46 conc0 = 1.e-6 ! Phosphate half saturation 47 conc1 = 8E-6 ! Phosphate half saturation for diatoms 48 conc2 = 1E-9 ! Iron half saturation for phyto 49 conc2m = 3E-9 ! Max iron half saturation for phyto 50 conc3 = 3E-9 ! Iron half saturation for diatoms 51 conc3m = 8E-9 ! Maxi iron half saturation for diatoms 48 concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton 49 concdno3 = 3.E-6 ! Phosphate half saturation for diatoms 50 concnnh4 = 1.E-7 ! NH4 half saturation for phyto 51 concdnh4 = 3.E-7 ! NH4 half saturation for diatoms 52 concnfer = 1.E-9 ! Iron half saturation for phyto 53 concdfer = 3.E-9 ! Iron half saturation for diatoms 54 concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria 55 concbnh4 = 2.5E-8 ! NH4 half saturation for phyto 56 concbno3 = 2.5E-7 ! Phosphate half saturation for diatoms 52 57 xsizedia = 1.E-6 ! Minimum size criteria for diatoms 53 58 xsizephy = 1.E-6 ! Minimum size criteria for phyto 54 concnnh4 = 1.E-7 ! NH4 half saturation for phyto55 concdnh4 = 8.E-7 ! NH4 half saturationfor diatoms59 xsizern = 3.0 ! Size ratio for nanophytoplankton 60 xsizerd = 3.0 ! Size ratio for diatoms 56 61 xksi1 = 2.E-6 ! half saturation constant for Si uptake 57 xksi2 = 3.33E-6 ! half saturation constant for Si/C62 xksi2 = 20E-6 ! half saturation constant for Si/C 58 63 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 59 concfebac = 1.E-11 ! Half-saturation for Fe limitation of Bacteria60 64 qnfelim = 7.E-6 ! Optimal quota of phyto 61 65 qdfelim = 7.E-6 ! Optimal quota of diatoms 62 caco3r = 0.16 ! mean rain ratio 63 / 66 caco3r = 0.3 ! mean rain ratio 67 / 68 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 69 &nampisopt ! parameters for optics 70 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 71 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! 72 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 73 sn_par = 'par.orca' , 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' 74 cn_dir = './' ! root directory for the location of the dynamical files 75 ln_varpar = .true. ! boolean for PAR variable 76 parlux = 0.43 ! Fraction of shortwave as PAR 77 / 64 78 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 65 79 &nampisprod ! parameters for phytoplankton growth … … 69 83 excret = 0.05 ! excretion ratio of phytoplankton 70 84 excret2 = 0.05 ! excretion ratio of diatoms 71 ln_newprod = .true. ! Enable new parame. of production (T/F)85 ln_newprod = .true. ! Enable new parame. of production (T/F) 72 86 bresp = 0.00333 ! Basal respiration rate 73 87 chlcnm = 0.033 ! Minimum Chl/C in nanophytoplankton 74 88 chlcdm = 0.05 ! Minimum Chl/C in diatoms 75 chlcmin = 0.00 33! Maximum Chl/c in phytoplankton89 chlcmin = 0.004 ! Maximum Chl/c in phytoplankton 76 90 fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton 77 91 fecdm = 40E-6 ! Minimum Fe/C in diatoms 78 grosip = 0.15 1! mean Si/C ratio92 grosip = 0.159 ! mean Si/C ratio 79 93 / 80 94 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 81 95 &nampismort ! parameters for phytoplankton sinks 82 96 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 83 wchl = 0.001 ! quadratic mortality of phytoplankton 84 wchld = 0.02 ! maximum quadratic mortality of diatoms 97 wchl = 0.01 ! quadratic mortality of phytoplankton 98 wchld = 0.01 ! maximum quadratic mortality of diatoms 99 wchldm = 0.03 ! maximum quadratic mortality of diatoms 85 100 mprat = 0.01 ! phytoplankton mortality rate 86 101 mprat2 = 0.01 ! Diatoms mortality rate 87 mpratm = 0.01 ! Phytoplankton minimum mortality rate88 102 / 89 103 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 90 104 &nampismes ! parameters for mesozooplankton 91 105 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 92 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts93 grazrat2 = 0.7 106 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 107 grazrat2 = 0.75 ! maximal mesozoo grazing rate 94 108 resrat2 = 0.005 ! exsudation rate of mesozooplankton 95 109 mzrat2 = 0.03 ! mesozooplankton mortality rate … … 102 116 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 103 117 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 104 xthresh2 = 2E-7! Food threshold for grazing118 xthresh2 = 3E-7 ! Food threshold for grazing 105 119 xkgraz2 = 20.E-6 ! half sturation constant for meso grazing 106 120 epsher2 = 0.3 ! Efficicency of Mesozoo growth … … 115 129 grazrat = 3.0 ! maximal zoo grazing rate 116 130 resrat = 0.03 ! exsudation rate of zooplankton 117 mzrat = 0.00 1! zooplankton mortality rate131 mzrat = 0.004 ! zooplankton mortality rate 118 132 xpref2c = 0.1 ! Microzoo preference for POM 119 133 xpref2p = 1. ! Microzoo preference for Nanophyto … … 122 136 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton 123 137 xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton 124 xthresh = 2.E-7 ! Food threshold for feeding138 xthresh = 3.E-7 ! Food threshold for feeding 125 139 xkgraz = 20.E-6 ! half sturation constant for grazing 126 140 epsher = 0.3 ! Efficiency of microzoo growth … … 129 143 / 130 144 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 145 &nampisfer ! parameters for iron chemistry 146 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 147 ln_fechem = .false. ! complex iron chemistry ( T/F ) 148 ln_ligvar = .true. ! variable ligand concentration 149 xlam1 = 0.005 ! scavenging rate of Iron 150 xlamdust = 150.0 ! Scavenging rate of dust 151 ligand = 0.6E-9 ! Ligands concentration 152 / 153 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 131 154 &nampisrem ! parameters for remineralization 132 155 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 133 xremik = 0. 25 ! remineralization rate of DOC156 xremik = 0.35 ! remineralization rate of DOC 134 157 xremip = 0.025 ! remineralisation rate of POC 135 158 nitrif = 0.05 ! NH4 nitrification rate 136 159 xsirem = 0.003 ! remineralization rate of Si 137 xsiremlab = 0.025 ! fast remineralization rate of Si 138 xsilab = 0.31 ! Fraction of labile biogenic silica 139 xlam1 = 0.005 ! scavenging rate of Iron 160 xsiremlab = 0.03 ! fast remineralization rate of Si 161 xsilab = 0.5 ! Fraction of labile biogenic silica 140 162 oxymin = 1.E-6 ! Half-saturation constant for anoxia 141 ligand = 0.6E-9 ! Ligands concentration142 163 / 143 164 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' … … 148 169 / 149 170 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' 150 &nampiss ed! parameters for inputs deposition171 &nampissbc ! parameters for inputs deposition 151 172 !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 152 173 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! 153 174 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 154 175 sn_dust = 'dust.orca' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' 155 sn_riverdic = 'river.orca' , -12 , 'riverdic' , .false. , .true. , 'yearly' , '' , '' 156 sn_riverdoc = 'river.orca' , -12 , 'riverdoc' , .false. , .true. , 'yearly' , '' , '' 176 sn_solub = 'solubility.orca' , -12 , 'solubility1' , .false. , .true. , 'yearly' , '' , '' 177 sn_riverdic = 'river.orca' , 120 , 'riverdic' , .true. , .true. , 'yearly' , '' , '' 178 sn_riverdoc = 'river.orca' , 120 , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' 179 sn_riverdin = 'river.orca' , 120 , 'riverdin' , .true. , .true. , 'yearly' , '' , '' 180 sn_riverdon = 'river.orca' , 120 , 'riverdon' , .true. , .true. , 'yearly' , '' , '' 181 sn_riverdip = 'river.orca' , 120 , 'riverdip' , .true. , .true. , 'yearly' , '' , '' 182 sn_riverdop = 'river.orca' , 120 , 'riverdop' , .true. , .true. , 'yearly' , '' , '' 183 sn_riverdsi = 'river.orca' , 120 , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' 157 184 sn_ndepo = 'ndeposition.orca', -12 , 'ndep' , .false. , .true. , 'yearly' , '' , '' 158 185 sn_ironsed = 'bathy.orca' , -12 , 'bathy' , .false. , .true. , 'yearly' , '' , '' 186 sn_hydrofe = 'hydrofe' , -12 , 'epsdb' , .false. , .true. , 'yearly' , '' , '' 159 187 ! 160 188 cn_dir = './' ! root directory for the location of the dynamical files 161 189 ln_dust = .true. ! boolean for dust input from the atmosphere 162 ln_river = .false. ! boolean for river input of nutrients 190 ln_solub = .true. ! boolean for variable solubility of atm. Iron 191 ln_river = .true. ! boolean for river input of nutrients 163 192 ln_ndepo = .true. ! boolean for atmospheric deposition of N 164 193 ln_ironsed = .true. ! boolean for Fe input from sediments 194 ln_ironice = .true. ! boolean for Fe input from sea ice 195 ln_hydrofe = .false. ! boolean for from hydrothermal vents 165 196 sedfeinput = 1E-9 ! Coastal release of Iron 166 197 dustsolub = 0.02 ! Solubility of the dust 167 wdust = 2.0 ! Dust sinking speed 198 wdust = 2.0 ! Dust sinking speed 199 icefeinput = 15E-9 ! Iron concentration in sea ice 168 200 nitrfix = 1E-7 ! Nitrogen fixation rate 169 201 diazolight = 50. ! Diazotrophs sensitivity to light (W/m2) 170 202 concfediaz = 1.E-10 ! Diazotrophs half-saturation Cste for Iron 203 hratio = 9.E-5 ! Fe to 3He ratio assumed for vent iron supply 171 204 / 172 205 !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' … … 175 208 xkr_eta = 1.17 ! Sinking exponent 176 209 xkr_zeta = 2.28 ! N content exponent 210 xkr_ncontent = 5.7E-6 ! N content factor 177 211 xkr_mass_min = 0.0002 ! Minimum mass for Aggregates 178 212 xkr_mass_max = 1. ! Maximum mass for Aggregates
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