Changeset 5403
- Timestamp:
- 2015-06-10T22:06:39+02:00 (9 years ago)
- Location:
- branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM
- Files:
-
- 13 edited
-
ARCH/arch-X64_CURIE.fcm (modified) (1 diff)
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CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) (1 diff)
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CONFIG/ORCA2_LIM3/EXP00/iodef.xml (modified) (1 diff)
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CONFIG/SHARED/field_def.xml (modified) (1 diff)
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CONFIG/SHARED/namelist_ref (modified) (2 diffs)
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NEMO/OFF_SRC/nemogcm.F90 (modified) (2 diffs)
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NEMO/OOO_SRC/nemogcm.F90 (modified) (2 diffs)
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NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) (5 diffs)
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NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) (9 diffs)
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NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) (10 diffs)
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NEMO/OPA_SRC/TRA/traqsr.F90 (modified) (5 diffs)
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NEMO/OPA_SRC/oce.F90 (modified) (3 diffs)
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SETTE/BATCH_TEMPLATE/batch-X64_CURIE (modified) (2 diffs)
Legend:
- Unmodified
- Added
- Removed
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branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/ARCH/arch-X64_CURIE.fcm
r4865 r5403 29 29 # - fcm variables are starting with a % (and not a $) 30 30 # 31 %NCDF_HOME /usr/local/netcdf-4.2_hdf5_parallel32 %HDF5_HOME /usr/local/hdf5-1.8. 9_parallel33 %XIOS_HOME $WORKDIR/ now/models/xios31 %NCDF_HOME /usr/local/netcdf-4.3.3.1_hdf5_parallel 32 %HDF5_HOME /usr/local/hdf5-1.8.12_parallel 33 %XIOS_HOME $WORKDIR/xios-1.0 34 34 %OASIS_HOME $WORKDIR/now/models/oa3mct 35 35 -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml
r5382 r5403 73 73 <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" > 74 74 <field field_ref="e3w" /> 75 <field field_ref="woce" name="wo" operation="instant" freq_op="5d" > @woce_e3w / @e3w </field>75 <field field_ref="woce" name="wo" /> 76 76 <field field_ref="avt" name="difvho" /> 77 77 </file> -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/iodef.xml
r5382 r5403 102 102 <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" > 103 103 <field field_ref="e3w" /> 104 <field field_ref="woce" name="wo" operation="instant" freq_op="5d" > @woce_e3w / @e3w </field>104 <field field_ref="woce" name="wo" /> 105 105 <field field_ref="avt" name="difvho" /> 106 106 <field field_ref="w_masstr" name="vovematr" /> -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/CONFIG/SHARED/field_def.xml
r5382 r5403 430 430 <field id="e3w" long_name="W-cell thickness" standard_name="cell_thickness" unit="m" /> 431 431 <field id="woce" long_name="ocean vertical velocity" standard_name="upward_sea_water_velocity" unit="m/s" /> 432 <field id="woce_e3w" long_name="ocean vertical velocity * e3v" unit="m2/s" > woce * e3w </field>433 432 <field id="wocetr_eff" long_name="effective ocean vertical transport" unit="m3/s" /> 434 433 -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/CONFIG/SHARED/namelist_ref
r5382 r5403 393 393 394 394 ln_3d_uve = .true. ! specify whether we are supplying a 3D u,v and e3 field 395 ln_read_frq = . true. ! specify whether we must read frq or not395 ln_read_frq = .false. ! specify whether we must read frq or not 396 396 cn_dir = './' ! root directory for the location of the bulk files are 397 397 / … … 426 426 427 427 cn_dir = './' ! root directory for the location of the runoff files 428 ln_rnf_emp = .false. ! runoffs included into precipitation field (T) or into a file (F)429 428 ln_rnf_mouth = .true. ! specific treatment at rivers mouths 430 429 rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OFF_SRC/nemogcm.F90
r5215 r5403 152 152 !!---------------------------------------------------------------------- 153 153 cltxt = '' 154 cxios_context = 'nemo' 154 155 ! 155 156 ! ! Open reference namelist and configuration namelist files … … 182 183 #if defined key_iomput 183 184 CALL xios_initialize( "nemo",return_comm=ilocal_comm ) 184 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection185 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection 185 186 #else 186 187 ilocal_comm = 0 187 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop ) ! Nodes selection (control print return in cltxt)188 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop ) ! Nodes selection (control print return in cltxt) 188 189 #endif 189 190 -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OOO_SRC/nemogcm.F90
r5220 r5403 171 171 ENDIF 172 172 ENDIF 173 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection173 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection 174 174 #else 175 175 IF( lk_oasis ) THEN … … 177 177 CALL cpl_init( ilocal_comm ) ! nemo local communicator given by oasis 178 178 ENDIF 179 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection (control print return in cltxt)179 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection (control print return in cltxt) 180 180 ELSE 181 181 ilocal_comm = 0 182 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop ) ! Nodes selection (control print return in cltxt)182 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop ) ! Nodes selection (control print return in cltxt) 183 183 ENDIF 184 184 #endif -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90
r5382 r5403 33 33 USE cpl_oasis3 ! OASIS3 coupling 34 34 USE geo2ocean ! 35 USE oce , ONLY : tsn, un, vn, sshn, ub, vb, sshb 35 USE oce , ONLY : tsn, un, vn, sshn, ub, vb, sshb, fraqsr_1lev 36 36 USE albedo ! 37 37 USE in_out_manager ! I/O manager … … 42 42 USE lbclnk ! ocean lateral boundary conditions (or mpp link) 43 43 USE eosbn2 44 USE traqsr , ONLY : fraqsr_1lev 45 USE sbcrnf , ONLY : l_rnfcpl, ln_rnf_emp 44 USE sbcrnf , ONLY : l_rnfcpl 46 45 #if defined key_cpl_carbon_cycle 47 46 USE p4zflx, ONLY : oce_co2 … … 401 400 ! ! Runoffs & Calving ! 402 401 ! ! ------------------------- ! 403 srcv(jpr_rnf )%clname = 'O_Runoff' ; IF( TRIM( sn_rcv_rnf%cldes ) == 'coupled' ) srcv(jpr_rnf)%laction = .TRUE. 404 l_rnfcpl = srcv(jpr_rnf)%laction 402 srcv(jpr_rnf )%clname = 'O_Runoff' 403 IF( TRIM( sn_rcv_rnf%cldes ) == 'coupled' ) THEN 404 srcv(jpr_rnf)%laction = .TRUE. 405 l_rnfcpl = .TRUE. ! -> no need to read runoffs in sbcrnf 406 ln_rnf = .TRUE. ! -> force to go through sbcrnf 407 IF(lwp) WRITE(numout,*) 408 IF(lwp) WRITE(numout,*) ' runoffs received from oasis -> force ln_rnf = .TRUE.' 409 ENDIF 405 410 ! 406 411 srcv(jpr_cal )%clname = 'OCalving' ; IF( TRIM( sn_rcv_cal%cldes ) == 'coupled' ) srcv(jpr_cal)%laction = .TRUE. … … 1067 1072 ! 1068 1073 ! ! runoffs and calving (added in emp) 1069 IF( srcv(jpr_rnf)%laction ) THEN 1070 IF( ln_rnf_emp ) THEN 1071 zemp(:,:) = zemp(:,:) - frcv(jpr_rnf)%z3(:,:,1) 1072 CALL iom_put( 'runoffs', zemp(:,:) ) ! rivers 1073 ELSE 1074 rnf(:,:) = frcv(jpr_rnf)%z3(:,:,1) 1075 ENDIF 1076 ENDIF 1074 IF( srcv(jpr_rnf)%laction ) rnf(:,:) = frcv(jpr_rnf)%z3(:,:,1) 1077 1075 IF( srcv(jpr_cal)%laction ) zemp(:,:) = zemp(:,:) - frcv(jpr_cal)%z3(:,:,1) 1078 1076 … … 1429 1427 ! 1430 1428 ! ! runoffs and calving (put in emp_tot) 1431 IF( srcv(jpr_rnf)%laction ) THEN 1432 IF( ln_rnf_emp ) THEN 1433 zemp_tot(:,:) = zemp_tot(:,:) - frcv(jpr_rnf)%z3(:,:,1) 1434 CALL iom_put( 'runoffs' , frcv(jpr_rnf)%z3(:,:,1) ) ! rivers 1435 IF( iom_use('hflx_rnf_cea') ) CALL iom_put( 'hflx_rnf_cea' , frcv(jpr_rnf)%z3(:,:,1) * zcptn(:,:) ) ! river heat flx 1436 ELSE 1437 rnf(:,:) = frcv(jpr_rnf)%z3(:,:,1) 1438 ENDIF 1439 ENDIF 1429 IF( srcv(jpr_rnf)%laction ) rnf(:,:) = frcv(jpr_rnf)%z3(:,:,1) 1440 1430 IF( srcv(jpr_cal)%laction ) THEN 1441 1431 zemp_tot(:,:) = zemp_tot(:,:) - frcv(jpr_cal)%z3(:,:,1) -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90
r5381 r5403 32 32 33 33 PUBLIC sbc_rnf ! routine call in sbcmod module 34 PUBLIC sbc_rnf_div ! routine called in sshwzvmodule34 PUBLIC sbc_rnf_div ! routine called in divcurl module 35 35 PUBLIC sbc_rnf_alloc ! routine call in sbcmod module 36 36 PUBLIC sbc_rnf_init ! (PUBLIC for TAM) … … 40 40 LOGICAL , PUBLIC :: ln_rnf_tem !: temperature river runoffs attribute specified in a file 41 41 LOGICAL , PUBLIC :: ln_rnf_sal !: salinity river runoffs attribute specified in a file 42 LOGICAL , PUBLIC :: ln_rnf_emp !: runoffs into a file to be read or already into precipitation43 42 TYPE(FLD_N) , PUBLIC :: sn_rnf !: information about the runoff file to be read 44 43 TYPE(FLD_N) , PUBLIC :: sn_cnf !: information about the runoff mouth file to be read … … 118 117 ENDIF 119 118 120 ! !-------------------! 121 IF( .NOT. ln_rnf_emp ) THEN ! Update runoff ! 122 ! !-------------------! 123 ! 124 IF( .NOT. l_rnfcpl ) CALL fld_read ( kt, nn_fsbc, sf_rnf ) ! Read Runoffs data and provide it at kt 125 IF( ln_rnf_tem ) CALL fld_read ( kt, nn_fsbc, sf_t_rnf ) ! idem for runoffs temperature if required 126 IF( ln_rnf_sal ) CALL fld_read ( kt, nn_fsbc, sf_s_rnf ) ! idem for runoffs salinity if required 127 ! 128 ! Runoff reduction only associated to the ORCA2_LIM configuration 129 ! when reading the NetCDF file runoff_1m_nomask.nc 130 IF( cp_cfg == 'orca' .AND. jp_cfg == 2 .AND. .NOT. l_rnfcpl ) THEN 131 WHERE( 40._wp < gphit(:,:) .AND. gphit(:,:) < 65._wp ) 132 sf_rnf(1)%fnow(:,:,1) = 0.85 * sf_rnf(1)%fnow(:,:,1) 119 ! !-------------------! 120 ! ! Update runoff ! 121 ! !-------------------! 122 ! 123 IF( .NOT. l_rnfcpl ) CALL fld_read ( kt, nn_fsbc, sf_rnf ) ! Read Runoffs data and provide it at kt 124 IF( ln_rnf_tem ) CALL fld_read ( kt, nn_fsbc, sf_t_rnf ) ! idem for runoffs temperature if required 125 IF( ln_rnf_sal ) CALL fld_read ( kt, nn_fsbc, sf_s_rnf ) ! idem for runoffs salinity if required 126 ! 127 ! Runoff reduction only associated to the ORCA2_LIM configuration 128 ! when reading the NetCDF file runoff_1m_nomask.nc 129 IF( cp_cfg == 'orca' .AND. jp_cfg == 2 .AND. .NOT. l_rnfcpl ) THEN 130 WHERE( 40._wp < gphit(:,:) .AND. gphit(:,:) < 65._wp ) 131 sf_rnf(1)%fnow(:,:,1) = 0.85 * sf_rnf(1)%fnow(:,:,1) 132 END WHERE 133 ENDIF 134 ! 135 IF( MOD( kt - 1, nn_fsbc ) == 0 ) THEN 136 ! 137 IF( .NOT. l_rnfcpl ) rnf(:,:) = rn_rfact * ( sf_rnf(1)%fnow(:,:,1) ) ! updated runoff value at time step kt 138 ! 139 ! ! set temperature & salinity content of runoffs 140 IF( ln_rnf_tem ) THEN ! use runoffs temperature data 141 rnf_tsc(:,:,jp_tem) = ( sf_t_rnf(1)%fnow(:,:,1) ) * rnf(:,:) * r1_rau0 142 WHERE( sf_t_rnf(1)%fnow(:,:,1) == -999._wp ) ! if missing data value use SST as runoffs temperature 143 rnf_tsc(:,:,jp_tem) = sst_m(:,:) * rnf(:,:) * r1_rau0 133 144 END WHERE 134 ENDIF 135 ! 136 IF( MOD( kt - 1, nn_fsbc ) == 0 ) THEN 137 ! 138 IF( .NOT. l_rnfcpl ) rnf(:,:) = rn_rfact * ( sf_rnf(1)%fnow(:,:,1) ) ! updated runoff value at time step kt 139 ! 140 ! ! set temperature & salinity content of runoffs 141 IF( ln_rnf_tem ) THEN ! use runoffs temperature data 142 rnf_tsc(:,:,jp_tem) = ( sf_t_rnf(1)%fnow(:,:,1) ) * rnf(:,:) * r1_rau0 143 WHERE( sf_t_rnf(1)%fnow(:,:,1) == -999._wp ) ! if missing data value use SST as runoffs temperature 144 rnf_tsc(:,:,jp_tem) = sst_m(:,:) * rnf(:,:) * r1_rau0 145 END WHERE 146 WHERE( sf_t_rnf(1)%fnow(:,:,1) == -222._wp ) ! where fwf comes from melting of ice shelves or iceberg 147 ztfrz(:,:) = -1.9 !tfreez( sss_m(:,:) ) !PM to be discuss (trouble if sensitivity study) 148 rnf_tsc(:,:,jp_tem) = ztfrz(:,:) * rnf(:,:) * r1_rau0 - rnf(:,:) * lfusisf * r1_rau0_rcp 149 END WHERE 150 ELSE ! use SST as runoffs temperature 151 rnf_tsc(:,:,jp_tem) = sst_m(:,:) * rnf(:,:) * r1_rau0 152 ENDIF 153 ! ! use runoffs salinity data 154 IF( ln_rnf_sal ) rnf_tsc(:,:,jp_sal) = ( sf_s_rnf(1)%fnow(:,:,1) ) * rnf(:,:) * r1_rau0 155 ! ! else use S=0 for runoffs (done one for all in the init) 156 CALL iom_put( "runoffs", rnf ) ! output runoffs arrays 157 ENDIF 158 ! 145 WHERE( sf_t_rnf(1)%fnow(:,:,1) == -222._wp ) ! where fwf comes from melting of ice shelves or iceberg 146 ztfrz(:,:) = -1.9 !tfreez( sss_m(:,:) ) !PM to be discuss (trouble if sensitivity study) 147 rnf_tsc(:,:,jp_tem) = ztfrz(:,:) * rnf(:,:) * r1_rau0 - rnf(:,:) * lfusisf * r1_rau0_rcp 148 END WHERE 149 ELSE ! use SST as runoffs temperature 150 rnf_tsc(:,:,jp_tem) = sst_m(:,:) * rnf(:,:) * r1_rau0 151 ENDIF 152 ! ! use runoffs salinity data 153 IF( ln_rnf_sal ) rnf_tsc(:,:,jp_sal) = ( sf_s_rnf(1)%fnow(:,:,1) ) * rnf(:,:) * r1_rau0 154 ! ! else use S=0 for runoffs (done one for all in the init) 155 CALL iom_put( "runoffs", rnf ) ! output runoffs arrays 159 156 ENDIF 160 157 ! … … 170 167 ELSE !* no restart: set from nit000 values 171 168 IF(lwp) WRITE(numout,*) ' nit000-1 runoff forcing fields set to nit000' 172 173 169 rnf_b (:,: ) = rnf (:,: ) 170 rnf_tsc_b(:,:,:) = rnf_tsc(:,:,:) 174 171 ENDIF 175 172 ENDIF … … 185 182 CALL iom_rstput( kt, nitrst, numrow, 'rnf_sc_b', rnf_tsc(:,:,jp_sal) ) 186 183 ENDIF 184 ! 187 185 CALL wrk_dealloc( jpi,jpj, ztfrz) 188 186 ! … … 258 256 INTEGER :: ios ! Local integer output status for namelist read 259 257 ! 260 NAMELIST/namsbc_rnf/ cn_dir , ln_rnf_emp, ln_rnf_depth, ln_rnf_tem, ln_rnf_sal, &258 NAMELIST/namsbc_rnf/ cn_dir , ln_rnf_depth, ln_rnf_tem, ln_rnf_sal, & 261 259 & sn_rnf, sn_cnf , sn_s_rnf , sn_t_rnf , sn_dep_rnf, & 262 260 & ln_rnf_mouth , rn_hrnf , rn_avt_rnf, rn_rfact … … 282 280 WRITE(numout,*) '~~~~~~~ ' 283 281 WRITE(numout,*) ' Namelist namsbc_rnf' 284 WRITE(numout,*) ' runoff in a file to be read ln_rnf_emp = ', ln_rnf_emp285 282 WRITE(numout,*) ' specific river mouths treatment ln_rnf_mouth = ', ln_rnf_mouth 286 283 WRITE(numout,*) ' river mouth additional Kz rn_avt_rnf = ', rn_avt_rnf 287 284 WRITE(numout,*) ' depth of river mouth additional mixing rn_hrnf = ', rn_hrnf 288 285 WRITE(numout,*) ' multiplicative factor for runoff rn_rfact = ', rn_rfact 289 ENDIF290 !291 IF( ln_rnf_emp .AND. nn_components == jp_iam_opa ) THEN292 CALL ctl_stop( 'sbc_rnf_init: ln_rnf_emp must be false in case of SAS-OPA coupling' ) ; RETURN293 286 ENDIF 294 287 ! ! ================== … … 298 291 IF( sbc_rnf_alloc() /= 0 ) CALL ctl_stop( 'STOP', 'sbc_rnf_alloc : unable to allocate arrays' ) 299 292 ! 300 IF( ln_rnf_emp ) THEN !== runoffs directly provided in the precipitations ==! 293 IF( .NOT. l_rnfcpl ) THEN 294 ALLOCATE( sf_rnf(1), STAT=ierror ) ! Create (if required) sf_rnf structure (runoff inflow) 301 295 IF(lwp) WRITE(numout,*) 302 IF(lwp) WRITE(numout,*) ' runoffs directly provided in the precipitations' 303 IF( ln_rnf_depth .OR. ln_rnf_tem .OR. ln_rnf_sal ) THEN 304 CALL ctl_warn( 'runoffs already included in precipitations, so runoff (T,S, depth) attributes will not be used' ) 305 ln_rnf_depth = .FALSE. ; ln_rnf_tem = .FALSE. ; ln_rnf_sal = .FALSE. 306 ENDIF 307 ! 308 ELSE !== runoffs read in a file : set sf_rnf structure ==! 309 ! 310 IF( .NOT. l_rnfcpl ) THEN 311 ALLOCATE( sf_rnf(1), STAT=ierror ) ! Create (if required) sf_rnf structure (runoff inflow) 312 IF(lwp) WRITE(numout,*) 313 IF(lwp) WRITE(numout,*) ' runoffs inflow read in a file' 314 IF( ierror > 0 ) THEN 315 CALL ctl_stop( 'sbc_rnf: unable to allocate sf_rnf structure' ) ; RETURN 316 ENDIF 317 ALLOCATE( sf_rnf(1)%fnow(jpi,jpj,1) ) 318 IF( sn_rnf%ln_tint ) ALLOCATE( sf_rnf(1)%fdta(jpi,jpj,1,2) ) 319 CALL fld_fill( sf_rnf, (/ sn_rnf /), cn_dir, 'sbc_rnf_init', 'read runoffs data', 'namsbc_rnf' ) 320 ENDIF 321 ! 322 IF( ln_rnf_tem ) THEN ! Create (if required) sf_t_rnf structure 323 IF(lwp) WRITE(numout,*) 324 IF(lwp) WRITE(numout,*) ' runoffs temperatures read in a file' 325 ALLOCATE( sf_t_rnf(1), STAT=ierror ) 326 IF( ierror > 0 ) THEN 327 CALL ctl_stop( 'sbc_rnf_init: unable to allocate sf_t_rnf structure' ) ; RETURN 328 ENDIF 329 ALLOCATE( sf_t_rnf(1)%fnow(jpi,jpj,1) ) 330 IF( sn_t_rnf%ln_tint ) ALLOCATE( sf_t_rnf(1)%fdta(jpi,jpj,1,2) ) 331 CALL fld_fill (sf_t_rnf, (/ sn_t_rnf /), cn_dir, 'sbc_rnf_init', 'read runoff temperature data', 'namsbc_rnf' ) 332 ENDIF 333 ! 334 IF( ln_rnf_sal ) THEN ! Create (if required) sf_s_rnf and sf_t_rnf structures 335 IF(lwp) WRITE(numout,*) 336 IF(lwp) WRITE(numout,*) ' runoffs salinities read in a file' 337 ALLOCATE( sf_s_rnf(1), STAT=ierror ) 338 IF( ierror > 0 ) THEN 339 CALL ctl_stop( 'sbc_rnf_init: unable to allocate sf_s_rnf structure' ) ; RETURN 340 ENDIF 341 ALLOCATE( sf_s_rnf(1)%fnow(jpi,jpj,1) ) 342 IF( sn_s_rnf%ln_tint ) ALLOCATE( sf_s_rnf(1)%fdta(jpi,jpj,1,2) ) 343 CALL fld_fill (sf_s_rnf, (/ sn_s_rnf /), cn_dir, 'sbc_rnf_init', 'read runoff salinity data', 'namsbc_rnf' ) 344 ENDIF 345 ! 346 IF( ln_rnf_depth ) THEN ! depth of runoffs set from a file 347 IF(lwp) WRITE(numout,*) 348 IF(lwp) WRITE(numout,*) ' runoffs depth read in a file' 349 rn_dep_file = TRIM( cn_dir )//TRIM( sn_dep_rnf%clname ) 350 IF( .NOT. sn_dep_rnf%ln_clim ) THEN ; WRITE(rn_dep_file, '(a,"_y",i4)' ) TRIM( rn_dep_file ), nyear ! add year 351 IF( sn_dep_rnf%cltype == 'monthly' ) WRITE(rn_dep_file, '(a,"m",i2)' ) TRIM( rn_dep_file ), nmonth ! add month 352 ENDIF 353 CALL iom_open ( rn_dep_file, inum ) ! open file 354 CALL iom_get ( inum, jpdom_data, sn_dep_rnf%clvar, h_rnf ) ! read the river mouth array 355 CALL iom_close( inum ) ! close file 356 ! 357 nk_rnf(:,:) = 0 ! set the number of level over which river runoffs are applied 358 DO jj = 1, jpj 359 DO ji = 1, jpi 360 IF( h_rnf(ji,jj) > 0._wp ) THEN 361 jk = 2 362 DO WHILE ( jk /= mbkt(ji,jj) .AND. gdept_0(ji,jj,jk) < h_rnf(ji,jj) ) ; jk = jk + 1 ; END DO 363 nk_rnf(ji,jj) = jk 364 ELSEIF( h_rnf(ji,jj) == -1._wp ) THEN ; nk_rnf(ji,jj) = 1 365 ELSEIF( h_rnf(ji,jj) == -999._wp ) THEN ; nk_rnf(ji,jj) = mbkt(ji,jj) 366 ELSE 367 CALL ctl_stop( 'sbc_rnf_init: runoff depth not positive, and not -999 or -1, rnf value in file fort.999' ) 368 WRITE(999,*) 'ji, jj, h_rnf(ji,jj) :', ji, jj, h_rnf(ji,jj) 369 ENDIF 296 IF(lwp) WRITE(numout,*) ' runoffs inflow read in a file' 297 IF( ierror > 0 ) THEN 298 CALL ctl_stop( 'sbc_rnf: unable to allocate sf_rnf structure' ) ; RETURN 299 ENDIF 300 ALLOCATE( sf_rnf(1)%fnow(jpi,jpj,1) ) 301 IF( sn_rnf%ln_tint ) ALLOCATE( sf_rnf(1)%fdta(jpi,jpj,1,2) ) 302 CALL fld_fill( sf_rnf, (/ sn_rnf /), cn_dir, 'sbc_rnf_init', 'read runoffs data', 'namsbc_rnf' ) 303 ENDIF 304 ! 305 IF( ln_rnf_tem ) THEN ! Create (if required) sf_t_rnf structure 306 IF(lwp) WRITE(numout,*) 307 IF(lwp) WRITE(numout,*) ' runoffs temperatures read in a file' 308 ALLOCATE( sf_t_rnf(1), STAT=ierror ) 309 IF( ierror > 0 ) THEN 310 CALL ctl_stop( 'sbc_rnf_init: unable to allocate sf_t_rnf structure' ) ; RETURN 311 ENDIF 312 ALLOCATE( sf_t_rnf(1)%fnow(jpi,jpj,1) ) 313 IF( sn_t_rnf%ln_tint ) ALLOCATE( sf_t_rnf(1)%fdta(jpi,jpj,1,2) ) 314 CALL fld_fill (sf_t_rnf, (/ sn_t_rnf /), cn_dir, 'sbc_rnf_init', 'read runoff temperature data', 'namsbc_rnf' ) 315 ENDIF 316 ! 317 IF( ln_rnf_sal ) THEN ! Create (if required) sf_s_rnf and sf_t_rnf structures 318 IF(lwp) WRITE(numout,*) 319 IF(lwp) WRITE(numout,*) ' runoffs salinities read in a file' 320 ALLOCATE( sf_s_rnf(1), STAT=ierror ) 321 IF( ierror > 0 ) THEN 322 CALL ctl_stop( 'sbc_rnf_init: unable to allocate sf_s_rnf structure' ) ; RETURN 323 ENDIF 324 ALLOCATE( sf_s_rnf(1)%fnow(jpi,jpj,1) ) 325 IF( sn_s_rnf%ln_tint ) ALLOCATE( sf_s_rnf(1)%fdta(jpi,jpj,1,2) ) 326 CALL fld_fill (sf_s_rnf, (/ sn_s_rnf /), cn_dir, 'sbc_rnf_init', 'read runoff salinity data', 'namsbc_rnf' ) 327 ENDIF 328 ! 329 IF( ln_rnf_depth ) THEN ! depth of runoffs set from a file 330 IF(lwp) WRITE(numout,*) 331 IF(lwp) WRITE(numout,*) ' runoffs depth read in a file' 332 rn_dep_file = TRIM( cn_dir )//TRIM( sn_dep_rnf%clname ) 333 IF( .NOT. sn_dep_rnf%ln_clim ) THEN ; WRITE(rn_dep_file, '(a,"_y",i4)' ) TRIM( rn_dep_file ), nyear ! add year 334 IF( sn_dep_rnf%cltype == 'monthly' ) WRITE(rn_dep_file, '(a,"m",i2)' ) TRIM( rn_dep_file ), nmonth ! add month 335 ENDIF 336 CALL iom_open ( rn_dep_file, inum ) ! open file 337 CALL iom_get ( inum, jpdom_data, sn_dep_rnf%clvar, h_rnf ) ! read the river mouth array 338 CALL iom_close( inum ) ! close file 339 ! 340 nk_rnf(:,:) = 0 ! set the number of level over which river runoffs are applied 341 DO jj = 1, jpj 342 DO ji = 1, jpi 343 IF( h_rnf(ji,jj) > 0._wp ) THEN 344 jk = 2 345 DO WHILE ( jk /= mbkt(ji,jj) .AND. gdept_0(ji,jj,jk) < h_rnf(ji,jj) ) ; jk = jk + 1 346 END DO 347 nk_rnf(ji,jj) = jk 348 ELSEIF( h_rnf(ji,jj) == -1._wp ) THEN ; nk_rnf(ji,jj) = 1 349 ELSEIF( h_rnf(ji,jj) == -999._wp ) THEN ; nk_rnf(ji,jj) = mbkt(ji,jj) 350 ELSE 351 CALL ctl_stop( 'sbc_rnf_init: runoff depth not positive, and not -999 or -1, rnf value in file fort.999' ) 352 WRITE(999,*) 'ji, jj, h_rnf(ji,jj) :', ji, jj, h_rnf(ji,jj) 353 ENDIF 354 END DO 355 END DO 356 DO jj = 1, jpj ! set the associated depth 357 DO ji = 1, jpi 358 h_rnf(ji,jj) = 0._wp 359 DO jk = 1, nk_rnf(ji,jj) 360 h_rnf(ji,jj) = h_rnf(ji,jj) + fse3t(ji,jj,jk) 370 361 END DO 371 362 END DO 372 DO jj = 1, jpj ! set the associated depth 373 DO ji = 1, jpi 374 h_rnf(ji,jj) = 0._wp 375 DO jk = 1, nk_rnf(ji,jj) 376 h_rnf(ji,jj) = h_rnf(ji,jj) + fse3t(ji,jj,jk) 377 END DO 378 END DO 379 END DO 380 ELSE ! runoffs applied at the surface 381 nk_rnf(:,:) = 1 382 h_rnf (:,:) = fse3t(:,:,1) 383 ENDIF 384 ! 363 END DO 364 ELSE ! runoffs applied at the surface 365 nk_rnf(:,:) = 1 366 h_rnf (:,:) = fse3t(:,:,1) 385 367 ENDIF 386 368 ! … … 403 385 IF( rn_hrnf > 0._wp ) THEN 404 386 nkrnf = 2 405 DO WHILE( nkrnf /= jpkm1 .AND. gdepw_1d(nkrnf+1) < rn_hrnf ) ; nkrnf = nkrnf + 1 ; END DO 387 DO WHILE( nkrnf /= jpkm1 .AND. gdepw_1d(nkrnf+1) < rn_hrnf ) ; nkrnf = nkrnf + 1 388 END DO 406 389 IF( ln_sco ) CALL ctl_warn( 'sbc_rnf: number of levels over which Kz is increased is computed for zco...' ) 407 390 ENDIF 408 IF(lwp) WRITE(numout,*)409 IF(lwp) WRITE(numout,*) ' Specific treatment used in vicinity of river mouths :'410 IF(lwp) WRITE(numout,*) ' - Increase Kz in surface layers (if rn_hrnf > 0 )'411 IF(lwp) WRITE(numout,*) ' by ', rn_avt_rnf,' m2/s over ', nkrnf, ' w-levels'412 IF(lwp) WRITE(numout,*) ' - set to zero SSS damping (if ln_ssr=T)'413 IF(lwp) WRITE(numout,*) ' - mixed upstream-centered (if ln_traadv_cen2=T)'414 !415 CALL rnf_mouth ! set river mouth mask416 !417 ELSE ! No treatment at river mouths418 IF(lwp) WRITE(numout,*)419 IF(lwp) WRITE(numout,*) ' No specific treatment at river mouths'420 rnfmsk (:,:) = 0._wp421 rnfmsk_z(:) = 0._wp422 nkrnf = 0423 ENDIF424 !425 END SUBROUTINE sbc_rnf_init391 IF(lwp) WRITE(numout,*) 392 IF(lwp) WRITE(numout,*) ' Specific treatment used in vicinity of river mouths :' 393 IF(lwp) WRITE(numout,*) ' - Increase Kz in surface layers (if rn_hrnf > 0 )' 394 IF(lwp) WRITE(numout,*) ' by ', rn_avt_rnf,' m2/s over ', nkrnf, ' w-levels' 395 IF(lwp) WRITE(numout,*) ' - set to zero SSS damping (if ln_ssr=T)' 396 IF(lwp) WRITE(numout,*) ' - mixed upstream-centered (if ln_traadv_cen2=T)' 397 ! 398 CALL rnf_mouth ! set river mouth mask 399 ! 400 ELSE ! No treatment at river mouths 401 IF(lwp) WRITE(numout,*) 402 IF(lwp) WRITE(numout,*) ' No specific treatment at river mouths' 403 rnfmsk (:,:) = 0._wp 404 rnfmsk_z(:) = 0._wp 405 nkrnf = 0 406 ENDIF 407 ! 408 END SUBROUTINE sbc_rnf_init 426 409 427 410 -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90
r5352 r5403 17 17 USE sbcapr ! surface boundary condition: atmospheric pressure 18 18 USE eosbn2 ! equation of state and related derivatives 19 USE traqsr, ONLY: ln_qsr_ice,fraqsr_1lev20 19 ! 21 20 USE in_out_manager ! I/O manager … … 82 81 ENDIF 83 82 ! 84 IF( lk_vvl 85 ! 86 IF( ln_qsr_ice )frq_m(:,:) = fraqsr_1lev(:,:)83 IF( lk_vvl ) e3t_m(:,:) = fse3t_n(:,:,1) 84 ! 85 frq_m(:,:) = fraqsr_1lev(:,:) 87 86 ! 88 87 ELSE … … 104 103 ENDIF 105 104 ! 106 IF( lk_vvl 107 ! 108 IF( ln_qsr_ice )frq_m(:,:) = zcoef * fraqsr_1lev(:,:)105 IF( lk_vvl ) e3t_m(:,:) = zcoef * fse3t_n(:,:,1) 106 ! 107 frq_m(:,:) = zcoef * fraqsr_1lev(:,:) 109 108 ! ! ---------------------------------------- ! 110 109 ELSEIF( MOD( kt - 2 , nn_fsbc ) == 0 ) THEN ! Initialisation: New mean computation ! … … 115 114 sss_m(:,:) = 0.e0 116 115 ssh_m(:,:) = 0.e0 117 IF( lk_vvl 118 IF( ln_qsr_ice )frq_m(:,:) = 0.e0116 IF( lk_vvl ) e3t_m(:,:) = 0.e0 117 frq_m(:,:) = 0.e0 119 118 ENDIF 120 119 ! ! ---------------------------------------- ! … … 132 131 ENDIF 133 132 ! 134 IF( lk_vvl 135 ! 136 IF( ln_qsr_ice )frq_m(:,:) = frq_m(:,:) + fraqsr_1lev(:,:)133 IF( lk_vvl ) e3t_m(:,:) = fse3t_m(:,:) + fse3t_n(:,:,1) 134 ! 135 frq_m(:,:) = frq_m(:,:) + fraqsr_1lev(:,:) 137 136 138 137 ! ! ---------------------------------------- ! … … 145 144 ssv_m(:,:) = ssv_m(:,:) * zcoef ! 146 145 ssh_m(:,:) = ssh_m(:,:) * zcoef ! mean SSH [m] 147 IF( lk_vvl 148 IF( ln_qsr_ice ) frq_m(:,:) =frq_m(:,:) * zcoef ! mean fraction of solar net radiation absorbed in the 1st T level [-]146 IF( lk_vvl ) e3t_m(:,:) = fse3t_m(:,:) * zcoef ! mean vertical scale factor [m] 147 frq_m(:,:) = frq_m(:,:) * zcoef ! mean fraction of solar net radiation absorbed in the 1st T level [-] 149 148 ! 150 149 ENDIF … … 163 162 CALL iom_rstput( kt, nitrst, numrow, 'sss_m' , sss_m ) 164 163 CALL iom_rstput( kt, nitrst, numrow, 'ssh_m' , ssh_m ) 165 IF( lk_vvl 166 IF( ln_qsr_ice )CALL iom_rstput( kt, nitrst, numrow, 'frq_m' , frq_m )164 IF( lk_vvl ) CALL iom_rstput( kt, nitrst, numrow, 'e3t_m' , e3t_m ) 165 CALL iom_rstput( kt, nitrst, numrow, 'frq_m' , frq_m ) 167 166 ! 168 167 ENDIF … … 176 175 CALL iom_put( 'sss_m', sss_m ) 177 176 CALL iom_put( 'ssh_m', ssh_m ) 178 IF( lk_vvl 179 IF( ln_qsr_ice )CALL iom_put( 'frq_m', frq_m )177 IF( lk_vvl ) CALL iom_put( 'e3t_m', e3t_m ) 178 CALL iom_put( 'frq_m', frq_m ) 180 179 ENDIF 181 180 ! … … 231 230 ssh_m(:,:) = zcoef * ssh_m(:,:) 232 231 IF( lk_vvl ) e3t_m(:,:) = zcoef * fse3t_m(:,:) 233 frq_m(:,:) = zcoef * frq_m(:,:) ! bug: must not be done if ln_qsr_ice = .false.232 frq_m(:,:) = zcoef * frq_m(:,:) 234 233 ELSE 235 234 IF(lwp) WRITE(numout,*) '~~~~~~~ mean fields read in the ocean restart file' … … 237 236 ENDIF 238 237 ENDIF 239 238 ! 240 239 IF( .NOT. l_ssm_mean ) THEN ! default initialisation. needed by lim_istate 241 240 ! -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90
r5352 r5403 37 37 38 38 PUBLIC tra_qsr ! routine called by step.F90 (ln_traqsr=T) 39 PUBLIC tra_qsr_init ! routine called by opa.F9039 PUBLIC tra_qsr_init ! routine called by nemogcm.F90 40 40 41 41 ! !!* Namelist namtra_qsr: penetrative solar radiation … … 50 50 REAL(wp), PUBLIC :: rn_si1 !: deepest depth of extinction (water type I) (2 bands) 51 51 52 !! Energy budget of the leads (open water embedded in sea ice)53 REAL(wp), PUBLIC, ALLOCATABLE, DIMENSION(:,:) :: fraqsr_1lev !: fraction of solar net radiation absorbed in the 1st T level [-]54 55 52 ! Module variables 56 53 REAL(wp) :: xsi0r !: inverse of rn_si0 … … 328 325 & 'at it= ', kt,' date= ', ndastp 329 326 IF(lwp) WRITE(numout,*) '~~~~' 330 CALL iom_rstput( kt, nitrst, numrow, 'qsr_hc_b', qsr_hc ) 327 CALL iom_rstput( kt, nitrst, numrow, 'qsr_hc_b' , qsr_hc ) 328 CALL iom_rstput( kt, nitrst, numrow, 'fraqsr_1lev', fraqsr_1lev ) ! default definition in sbcssm 331 329 ! 332 330 ENDIF … … 413 411 ENDIF 414 412 415 ! allocate fraqsr_1lev if we have ln_qsr_ice416 IF( ln_qsr_ice ) THEN417 ALLOCATE( fraqsr_1lev(jpi,jpj) , STAT=ierror )418 IF( ierror > 0 ) THEN419 CALL ctl_stop( 'tra_qsr_init: unable to allocate fraqsr_1lev array' ) ; RETURN420 ENDIF421 fraqsr_1lev(:,:) = 1._wp ! default definition used in the 1st time step as sbc_ssm is called before tra_qsr422 ENDIF423 424 413 IF( ln_traqsr ) THEN ! control consistency 425 414 ! … … 571 560 ENDIF 572 561 ! 562 ! initialisation of fraqsr_1lev used in sbcssm 563 IF( iom_varid( numror, 'fraqsr_1lev', ldstop = .FALSE. ) > 0 ) THEN 564 CALL iom_get( numror, jpdom_autoglo, 'fraqsr_1lev' , fraqsr_1lev ) 565 ELSE 566 fraqsr_1lev(:,:) = 1._wp ! default definition 567 ENDIF 568 ! 573 569 CALL wrk_dealloc( jpi, jpj, zekb, zekg, zekr ) 574 570 CALL wrk_dealloc( jpi, jpj, jpk, ze0, ze1, ze2, ze3, zea ) -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/NEMO/OPA_SRC/oce.F90
r5352 r5403 69 69 REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:) :: snwice_fmass !: time evolution of mass of snow+ice [Kg/m2/s] 70 70 71 !! Energy budget of the leads (open water embedded in sea ice) 72 REAL(wp), PUBLIC, ALLOCATABLE, SAVE, DIMENSION(:,:) :: fraqsr_1lev !: fraction of solar net radiation absorbed in the first ocean level [-] 73 71 74 !!---------------------------------------------------------------------- 72 75 !! NEMO/OPA 4.0 , NEMO Consortium (2011) … … 80 83 !! *** FUNCTION oce_alloc *** 81 84 !!---------------------------------------------------------------------- 82 INTEGER :: ierr( 3)85 INTEGER :: ierr(4) 83 86 !!---------------------------------------------------------------------- 84 87 ! … … 114 117 ALLOCATE( snwice_mass(jpi,jpj) , snwice_mass_b(jpi,jpj), snwice_fmass(jpi,jpj) , STAT=ierr(3) ) 115 118 ! 119 ALLOCATE( fraqsr_1lev(jpi,jpj) , STAT=ierr(4) ) 120 ! 116 121 oce_alloc = MAXVAL( ierr ) 117 122 IF( oce_alloc /= 0 ) CALL ctl_warn('oce_alloc: failed to allocate arrays') -
branches/2015/dev_r5218_CNRS17_coupling/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_CURIE
r4147 r5403 8 8 #MSUB -n NPROCS # Total number of mpi task to use 9 9 #### #MSUB -N 2 # number of nodes to use 10 #MSUB - A gen0826 # project name10 #MSUB -ra2286 # project name 11 11 #MSUB -q standard # (queue name) only for thin nodes 12 12 ########################################################################## … … 33 33 module unload netcdf 34 34 module unload hdf5 35 module load netcdf/4. 2_hdf5_parallel36 module load hdf5/1.8. 9_parallel35 module load netcdf/4.3.3.1_hdf5_parallel 36 module load hdf5/1.8.12_parallel 37 37 38 38 # Don't remove neither change the following line
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