Index: branches/2015/dev_r5021_UKMO1_CICE_coupling/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml
===================================================================
--- branches/2015/dev_r5021_UKMO1_CICE_coupling/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml	(revision 5213)
+++ branches/2015/dev_r5021_UKMO1_CICE_coupling/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml	(revision 5443)
@@ -35,65 +35,59 @@
  
 	<file id="file1" name_suffix="_grid_T" description="ocean T grid variables" >
-	  <field field_ref="e3t"  />
-	  <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"                    operation="instant" freq_op="5d" > @toce_e3t / @e3t </field>
-	  <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                                 operation="instant" freq_op="5d" > @soce_e3t / @e3t </field>
-	  <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                       />
-	  <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                          />
-	  <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                />
-	  <field field_ref="sst"          name="tosstd"   long_name="sea_surface_temperature_standard_deviation"         operation="instant" freq_op="5d" > sqrt( @sst2 - @sst * @sst ) </field>
-	  <field field_ref="ssh"          name="zosstd"   long_name="sea_surface_height_above_geoid_standard_deviation"  operation="instant" freq_op="5d" > sqrt( @ssh2 - @ssh * @ssh ) </field>
-	  <field field_ref="sst"          name="sstdcy"   long_name="amplitude of sst diurnal cycle" operation="average" freq_op="1d" > @sstmax - @sstmin </field>
-	  <field field_ref="mldkz5"       />
-	  <field field_ref="mldr10_1"     />
-	  <field field_ref="mldr10_1"     name="mldr10_1dcy"  long_name="amplitude of mldr10_1 diurnal cycle" operation="average" freq_op="1d" > @mldr10_1max - @mldr10_1min </field>
-	  <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                     />
-	  <field field_ref="qsr"          name="rsntds"   long_name="surface_net_downward_shortwave_flux"           />
-	  <field field_ref="qt"           name="tohfls"   long_name="surface_net_downward_total_heat_flux"          />
+	  <field field_ref="e3t"                          />
+	  <field field_ref="toce"         name="thetao"                                                                      operation="instant" freq_op="5d" > @toce_e3t / @e3t </field>
+	  <field field_ref="soce"         name="so"                                                                          operation="instant" freq_op="5d" > @soce_e3t / @e3t </field>
+	  <field field_ref="sst"          name="tos"      />
+	  <field field_ref="sss"          name="sos"      />
+	  <field field_ref="ssh"          name="zos"      />
+	  <field field_ref="sst"          name="tosstd"       long_name="sea surface temperature standard deviation"         operation="instant" freq_op="5d" > sqrt( @sst2 - @sst * @sst ) </field>
+	  <field field_ref="ssh"          name="zosstd"       long_name="sea surface height above geoid standard deviation"  operation="instant" freq_op="5d" > sqrt( @ssh2 - @ssh * @ssh ) </field>
+	  <field field_ref="sst"          name="sstdcy"       long_name="amplitude of sst diurnal cycle"                     operation="average" freq_op="1d" > @sstmax - @sstmin </field>
+	  <field field_ref="mldkz5"                       />
+	  <field field_ref="mldr10_1"                     />
+	  <field field_ref="mldr10_1"     name="mldr10_1dcy"  long_name="amplitude of mldr10_1 diurnal cycle"                operation="average" freq_op="1d" > @mldr10_1max - @mldr10_1min </field>
+	  <field field_ref="empmr"        name="wfo"      />
+	  <field field_ref="qsr"          name="rsntds"   />
+	  <field field_ref="qt"           name="tohfls"   />
 	  <field field_ref="saltflx"      name="sosflxdo" />
-	  <field field_ref="taum"         name="taum"     />
+	  <field field_ref="taum"                         />
 	  <field field_ref="wspd"         name="sowindsp" />
-          <field field_ref="precip"       name="soprecip" />
+      <field field_ref="precip"       name="soprecip" />
 	  <field field_ref="sbt"                          />
 	</file>
 
 	<file id="file3" name_suffix="_grid_U" description="ocean U grid variables" >
-	  <field field_ref="e3u"  />
-	  <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    />
-	  <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity" operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field>
-	  <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" />
-          <!-- variables available with MLE
-          <field field_ref="psiu_mle"     name="psiu_mle"  long_name="MLE_streamfunction_along_i-axis" />
-	  -->
+	  <field field_ref="e3u"                       />
+	  <field field_ref="ssu"          name="uos"   />
+	  <field field_ref="uoce"         name="uo"      operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field>
+	  <field field_ref="utau"         name="tauuo" />
 	</file>
 	
 	<file id="file4" name_suffix="_grid_V" description="ocean V grid variables" >
-	  <field field_ref="e3v"  />
-	  <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    />
-	  <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity" operation="instant" freq_op="5d" > @voce_e3v / @e3v </field>
-	  <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" />
-          <!-- variables available with MLE
-          <field field_ref="psiv_mle"     name="psiv_mle"  long_name="MLE_streamfunction_along_j-axis" />
-	  -->
+	  <field field_ref="e3v"                       />
+	  <field field_ref="ssv"          name="vos"   />
+	  <field field_ref="voce"         name="vo"      operation="instant" freq_op="5d" > @voce_e3v / @e3v </field>
+	  <field field_ref="vtau"         name="tauvo" />
 	</file>
 	
 	<file id="file5" name_suffix="_grid_W" description="ocean W grid variables" >
-	  <field field_ref="e3w"  />
-	  <field field_ref="woce"         name="wo"      long_name="ocean vertical velocity" operation="instant" freq_op="5d" > @woce_e3w / @e3w </field>
-	  <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" />
+	  <field field_ref="e3w"                        />
+	  <field field_ref="woce"         name="wo"     />
+	  <field field_ref="avt"          name="difvho" />
 	</file>
 
 	<file id="file6" name_suffix="_icemod" description="ice variables" >
-	  <field field_ref="ice_pres"                     />
-	  <field field_ref="snowthic_cea" name="snd"     long_name="surface_snow_thickness"   />
-	  <field field_ref="icethic_cea"  name="sit"     long_name="sea_ice_thickness"        />
-	  <field field_ref="iceprod_cea"  name="sip"     long_name="sea_ice_thickness"        />
-	  <field field_ref="ist_ipa"      />
-	  <field field_ref="uice_ipa"     />
-	  <field field_ref="vice_ipa"     />
-	  <field field_ref="utau_ice"     />
-	  <field field_ref="vtau_ice"     />
-	  <field field_ref="qsr_io_cea"   />
-	  <field field_ref="qns_io_cea"   />
-	  <field field_ref="snowpre"      />
+	  <field field_ref="ice_pres"   />
+	  <field field_ref="snowthic_cea" name="snd" />
+	  <field field_ref="icethic_cea"  name="sit" />
+	  <field field_ref="iceprod_cea"  name="sip" />
+	  <field field_ref="ist_ipa"    />
+	  <field field_ref="uice_ipa"   />
+	  <field field_ref="vice_ipa"   />
+	  <field field_ref="utau_ice"   />
+	  <field field_ref="vtau_ice"   />
+	  <field field_ref="qsr_io_cea" />
+	  <field field_ref="qns_io_cea" />
+	  <field field_ref="snowpre"    />
 	</file>
 
@@ -108,10 +102,8 @@
 	</file>
 	-->
+
       </file_group>
 
-
       <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
-
-
       <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
       <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
@@ -133,12 +125,15 @@
     
    <axis_definition>  
-      <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" />
-      <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />
-      <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />
-      <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />
-      <axis id="nfloat" long_name="Float number"      unit="-"  />
-      <axis id="icbcla" long_name="Iceberg class"     unit="-"  />
+      <axis id="deptht"  long_name="Vertical T levels"  unit="m" positive="down" />
+      <axis id="depthu"  long_name="Vertical U levels"  unit="m" positive="down" />
+      <axis id="depthv"  long_name="Vertical V levels"  unit="m" positive="down" />
+      <axis id="depthw"  long_name="Vertical W levels"  unit="m" positive="down" />
+      <axis id="nfloat"  long_name="Float number"       unit="1"                 />
+      <axis id="icbcla"  long_name="Iceberg class"      unit="1"                 />
+      <axis id="ncatice" long_name="Ice category"       unit="1"                 />
+      <axis id="iax_20C" long_name="20 degC isotherm"   unit="degC"              />
+      <axis id="iax_28C" long_name="28 degC isotherm"   unit="degC"              />
    </axis_definition> 
-    
+   
    <domain_definition src="./domain_def.xml"/>
    
@@ -152,4 +147,7 @@
      <grid id="grid_W_2D" domain_ref="grid_W"/>
      <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/>
+     <grid id="gznl_T_2D" domain_ref="gznl"/>
+     <grid id="gznl_T_3D" domain_ref="gznl" axis_ref="deptht"/>
+     <grid id="gznl_W_3D" domain_ref="gznl" axis_ref="depthw"/>
     </grid_definition>   
   </context>
