- Timestamp:
- 2015-08-26T14:18:46+02:00 (9 years ago)
- File:
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- 1 edited
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branches/NERC/dev_r5107_NOC_MEDUSA/NEMOGCM/NEMO/TOP_SRC/trcrst.F90
r4990 r5707 28 28 USE iom 29 29 USE daymod 30 !! AXY (05/11/13): need these for MEDUSA to input/output benthic reservoirs 31 USE sms_medusa 32 USE trcsms_medusa 33 !! 30 34 IMPLICIT NONE 31 35 PRIVATE … … 88 92 SUBROUTINE trc_rst_read 89 93 !!---------------------------------------------------------------------- 90 !! *** trc_r st_opn ***94 !! *** trc_read_opn *** 91 95 !! 92 96 !! ** purpose : read passive tracer fields in restart files 93 97 !!---------------------------------------------------------------------- 94 98 INTEGER :: jn 99 !! AXY (05/11/13): temporary variables 100 REAL(wp) :: fq0,fq1,fq2 95 101 96 102 !!---------------------------------------------------------------------- … … 108 114 CALL iom_get( numrtr, jpdom_autoglo, 'TRB'//ctrcnm(jn), trb(:,:,:,jn) ) 109 115 END DO 116 117 !! AXY (09/06/14): the ARCHER version of MEDUSA-2 does not include an equivalent 118 !! call to MEDUSA-2 at this point; this suggests that the FCM 119 !! version of NEMO date significantly earlier than the current 120 !! version 121 122 #if defined key_medusa 123 !! AXY (13/01/12): check if the restart contains sediment fields; 124 !! this is only relevant for simulations that include 125 !! biogeochemistry and are restarted from earlier runs 126 !! in which there was no sediment component 127 !! 128 IF( iom_varid( numrtr, 'B_SED_N', ldstop = .FALSE. ) > 0 ) THEN 129 !! YES; in which case read them 130 !! 131 IF(lwp) WRITE(numout,*) ' MEDUSA sediment fields present - reading in ...' 132 CALL iom_get( numrtr, jpdom_autoglo, 'B_SED_N', zb_sed_n(:,:) ) 133 CALL iom_get( numrtr, jpdom_autoglo, 'N_SED_N', zn_sed_n(:,:) ) 134 CALL iom_get( numrtr, jpdom_autoglo, 'B_SED_FE', zb_sed_fe(:,:) ) 135 CALL iom_get( numrtr, jpdom_autoglo, 'N_SED_FE', zn_sed_fe(:,:) ) 136 CALL iom_get( numrtr, jpdom_autoglo, 'B_SED_SI', zb_sed_si(:,:) ) 137 CALL iom_get( numrtr, jpdom_autoglo, 'N_SED_SI', zn_sed_si(:,:) ) 138 CALL iom_get( numrtr, jpdom_autoglo, 'B_SED_C', zb_sed_c(:,:) ) 139 CALL iom_get( numrtr, jpdom_autoglo, 'N_SED_C', zn_sed_c(:,:) ) 140 CALL iom_get( numrtr, jpdom_autoglo, 'B_SED_CA', zb_sed_ca(:,:) ) 141 CALL iom_get( numrtr, jpdom_autoglo, 'N_SED_CA', zn_sed_ca(:,:) ) 142 ELSE 143 !! NO; in which case set them to zero 144 !! 145 IF(lwp) WRITE(numout,*) ' MEDUSA sediment fields absent - setting to zero ...' 146 zb_sed_n(:,:) = 0.0 !! organic N 147 zn_sed_n(:,:) = 0.0 148 zb_sed_fe(:,:) = 0.0 !! organic Fe 149 zn_sed_fe(:,:) = 0.0 150 zb_sed_si(:,:) = 0.0 !! inorganic Si 151 zn_sed_si(:,:) = 0.0 152 zb_sed_c(:,:) = 0.0 !! organic C 153 zn_sed_c(:,:) = 0.0 154 zb_sed_ca(:,:) = 0.0 !! inorganic C 155 zn_sed_ca(:,:) = 0.0 156 ENDIF 157 !! 158 !! calculate stats on these fields 159 IF(lwp) WRITE(numout,*) ' MEDUSA sediment field stats (min, max, sum) ...' 160 fq0 = MINVAL(zn_sed_n(:,:)) 161 fq1 = MAXVAL(zn_sed_n(:,:)) 162 fq2 = SUM(zn_sed_n(:,:)) 163 if (lwp) write (numout,'(a,3f15.5)') 'Sediment N ', & 164 & fq0, fq1, fq2 165 fq0 = MINVAL(zn_sed_fe(:,:)) 166 fq1 = MAXVAL(zn_sed_fe(:,:)) 167 fq2 = SUM(zn_sed_fe(:,:)) 168 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Fe ', & 169 & fq0, fq1, fq2 170 fq0 = MINVAL(zn_sed_si(:,:)) 171 fq1 = MAXVAL(zn_sed_si(:,:)) 172 fq2 = SUM(zn_sed_si(:,:)) 173 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Si ', & 174 & fq0, fq1, fq2 175 fq0 = MINVAL(zn_sed_c(:,:)) 176 fq1 = MAXVAL(zn_sed_c(:,:)) 177 fq2 = SUM(zn_sed_c(:,:)) 178 if (lwp) write (numout,'(a,3f15.5)') 'Sediment C ', & 179 & fq0, fq1, fq2 180 fq0 = MINVAL(zn_sed_ca(:,:)) 181 fq1 = MAXVAL(zn_sed_ca(:,:)) 182 fq2 = SUM(zn_sed_ca(:,:)) 183 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Ca ', & 184 & fq0, fq1, fq2 185 #endif 186 110 187 ! 111 188 END SUBROUTINE trc_rst_read … … 121 198 INTEGER :: jn 122 199 REAL(wp) :: zarak0 200 !! AXY (05/11/13): temporary variables 201 REAL(wp) :: fq0,fq1,fq2 123 202 !!---------------------------------------------------------------------- 124 203 ! … … 133 212 CALL iom_rstput( kt, nitrst, numrtw, 'TRB'//ctrcnm(jn), trb(:,:,:,jn) ) 134 213 END DO 214 215 !! AXY (09/06/14): the ARCHER version of MEDUSA-2 does not include an equivalent 216 !! call to MEDUSA-2 at this point; this suggests that the FCM 217 !! version of NEMO date significantly earlier than the current 218 !! version 219 220 #if defined key_medusa 221 !! AXY (13/01/12): write out "before" and "now" state of seafloor 222 !! sediment pools into restart; this happens 223 !! whether or not the pools are to be used by 224 !! MEDUSA (which is controlled by a switch in the 225 !! namelist_top file) 226 !! 227 IF(lwp) WRITE(numout,*) ' MEDUSA sediment fields - writing out ...' 228 CALL iom_rstput( kt, nitrst, numrtw, 'B_SED_N', zb_sed_n(:,:) ) 229 CALL iom_rstput( kt, nitrst, numrtw, 'N_SED_N', zn_sed_n(:,:) ) 230 CALL iom_rstput( kt, nitrst, numrtw, 'B_SED_FE', zb_sed_fe(:,:) ) 231 CALL iom_rstput( kt, nitrst, numrtw, 'N_SED_FE', zn_sed_fe(:,:) ) 232 CALL iom_rstput( kt, nitrst, numrtw, 'B_SED_SI', zb_sed_si(:,:) ) 233 CALL iom_rstput( kt, nitrst, numrtw, 'N_SED_SI', zn_sed_si(:,:) ) 234 CALL iom_rstput( kt, nitrst, numrtw, 'B_SED_C', zb_sed_c(:,:) ) 235 CALL iom_rstput( kt, nitrst, numrtw, 'N_SED_C', zn_sed_c(:,:) ) 236 CALL iom_rstput( kt, nitrst, numrtw, 'B_SED_CA', zb_sed_ca(:,:) ) 237 CALL iom_rstput( kt, nitrst, numrtw, 'N_SED_CA', zn_sed_ca(:,:) ) 238 !! 239 !! calculate stats on these fields 240 IF(lwp) WRITE(numout,*) ' MEDUSA sediment field stats (min, max, sum) ...' 241 fq0 = MINVAL(zn_sed_n(:,:)) 242 fq1 = MAXVAL(zn_sed_n(:,:)) 243 fq2 = SUM(zn_sed_n(:,:)) 244 if (lwp) write (numout,'(a,3f15.5)') 'Sediment N ', & 245 & fq0, fq1, fq2 246 fq0 = MINVAL(zn_sed_fe(:,:)) 247 fq1 = MAXVAL(zn_sed_fe(:,:)) 248 fq2 = SUM(zn_sed_fe(:,:)) 249 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Fe ', & 250 & fq0, fq1, fq2 251 fq0 = MINVAL(zn_sed_si(:,:)) 252 fq1 = MAXVAL(zn_sed_si(:,:)) 253 fq2 = SUM(zn_sed_si(:,:)) 254 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Si ', & 255 & fq0, fq1, fq2 256 fq0 = MINVAL(zn_sed_c(:,:)) 257 fq1 = MAXVAL(zn_sed_c(:,:)) 258 fq2 = SUM(zn_sed_c(:,:)) 259 if (lwp) write (numout,'(a,3f15.5)') 'Sediment C ', & 260 & fq0, fq1, fq2 261 fq0 = MINVAL(zn_sed_ca(:,:)) 262 fq1 = MAXVAL(zn_sed_ca(:,:)) 263 fq2 = SUM(zn_sed_ca(:,:)) 264 if (lwp) write (numout,'(a,3f15.5)') 'Sediment Ca ', & 265 & fq0, fq1, fq2 266 #endif 267 135 268 ! 136 269 IF( kt == nitrst ) THEN
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