Changeset 5988
- Timestamp:
- 2015-12-02T19:23:34+01:00 (8 years ago)
- Location:
- branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST
- Files:
-
- 1 added
- 5 edited
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inc/trusting_func.sh (modified) (1 diff)
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inputs/AMM12/namelist_cfg (modified) (10 diffs)
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inputs/ORCA2_LIM_PISCES/namelist_cfg (modified) (7 diffs)
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inputs/ORCA2_LIM_PISCES/namelist_ice_cfg (added)
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inputs/ORCA2_LIM_PISCES/namelist_top_cfg (modified) (3 diffs)
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trusting.sh (modified) (1 diff)
Legend:
- Unmodified
- Added
- Removed
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branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inc/trusting_func.sh
r5934 r5988 123 123 ${get_io} > /dev/null 124 124 [ $? -ne 0 ] && get_out 3 || echo 'Success' 125 [ $( find -name '*.gz' -print -quit ) ] && gunzip *.gz125 [ $( find -name '*.gz' -print -quit ) ] && find . -name '*.gz' -exec gzip -d {} \; 126 126 127 127 ls -lh > inputs_list.txt -
branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inputs/AMM12/namelist_cfg
r5703 r5988 14 14 cn_ocerst_in = "amm12_restart_oce" ! suffix of ocean restart name (input) 15 15 cn_ocerst_out = "restart_oce_out" ! suffix of ocean restart name (input) 16 nn_stock = 1296 17 nn_write = 144 16 nn_stock = 1296 ! frequency of creation of a restart file (modulo referenced to 1) 17 nn_write = 144 ! frequency of write in the output file (modulo referenced to nit000) 18 18 / 19 19 !----------------------------------------------------------------------- … … 73 73 / 74 74 !----------------------------------------------------------------------- 75 &namsplit ! time splitting parameters ("key_dynspg_ts")76 !-----------------------------------------------------------------------77 ln_bt_nn_auto = .FALSE. ! Set nn_baro automatically to be just below78 ! a user defined maximum courant number (rn_bt_cmax)79 nn_baro = 30 ! Number of iterations of barotropic mode80 /81 !-----------------------------------------------------------------------82 75 &namcrs ! Grid coarsening for dynamics output and/or 83 76 ! passive tracer coarsened online simulations … … 195 188 rn_shlat = 0 ! shlat = 0 ! 0 < shlat < 2 ! shlat = 2 ! 2 < shlat 196 189 ! free slip ! partial slip ! no slip ! strong slip 197 /198 !-----------------------------------------------------------------------199 &namcla ! cross land advection200 !-----------------------------------------------------------------------201 /202 !-----------------------------------------------------------------------203 &namobc ! open boundaries parameters ("key_obc")204 !-----------------------------------------------------------------------205 190 / 206 191 !----------------------------------------------------------------------- … … 282 267 &namtra_adv ! advection scheme for tracer 283 268 !----------------------------------------------------------------------- 269 ln_traadv_fct = .true. ! FCT scheme 270 nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order 271 nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order 272 nn_fct_zts = 0 ! >=1, 2nd order FCT scheme with vertical sub-timestepping 273 ! ! (number of sub-timestep = nn_fct_zts) 284 274 / 285 275 !----------------------------------------------------------------------- … … 290 280 &namtra_ldf ! lateral diffusion scheme for tracers 291 281 !---------------------------------------------------------------------------------- 292 ln_traldf_hor = .true. ! horizontal (geopotential) (needs "key_ldfslp" when ln_sco=T) 293 ln_traldf_iso = .false. ! iso-neutral (needs "key_ldfslp") 294 rn_aeiv_0 = 0. ! eddy induced velocity coefficient [m2/s] 295 rn_aht_0 = 50. ! horizontal eddy diffusivity for tracers [m2/s] 282 ! ! Operator type: 283 ln_traldf_lap = .true. ! laplacian operator 284 ln_traldf_blp = .false. ! bilaplacian operator 285 ! ! Direction of action: 286 ln_traldf_lev = .false. ! iso-level 287 ln_traldf_hor = .true. ! horizontal (geopotential) 288 ln_traldf_iso = .false. ! iso-neutral 289 ln_traldf_triad = .false. ! iso-neutral using Griffies triads 290 ! 291 ! ! iso-neutral options: 292 ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators) 293 rn_slpmax = 0.01 ! slope limit (both operators) 294 ln_triad_iso = .false. ! pure horizontal mixing in ML (triad only) 295 rn_sw_triad = 1 ! =1 switching triad ; =0 all 4 triads used (triad only) 296 ln_botmix_triad = .false. ! lateral mixing on bottom (triad only) 297 ! 298 ! ! Coefficients: 299 nn_aht_ijk_t = 0 ! space/time variation of eddy coef 300 ! ! =-20 (=-30) read in eddy_diffusivity_2D.nc (..._3D.nc) file 301 ! ! = 0 constant 302 ! ! = 10 F(k) =ldf_c1d 303 ! ! = 20 F(i,j) =ldf_c2d 304 ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation 305 ! ! = 30 F(i,j,k) =ldf_c2d + ldf_c1d 306 ! ! = 31 F(i,j,k,t)=F(local velocity) 307 rn_aht_0 = 50. ! lateral eddy diffusivity (lap. operator) [m2/s] 308 rn_bht_0 = 1.e+12 ! lateral eddy diffusivity (bilap. operator) [m4/s] 309 / 310 !---------------------------------------------------------------------------------- 311 &namtra_ldfeiv ! eddy induced velocity param. 312 !---------------------------------------------------------------------------------- 313 ln_ldfeiv =.false. ! use eddy induced velocity parameterization 296 314 / 297 315 !----------------------------------------------------------------------- … … 307 325 &namdyn_vor ! option of physics/algorithm (not control by CPP keys) 308 326 !----------------------------------------------------------------------- 327 ln_dynvor_ene = .false. ! enstrophy conserving scheme 328 ln_dynvor_ens = .false. ! energy conserving scheme 329 ln_dynvor_mix = .false. ! mixed scheme 330 ln_dynvor_een = .true. ! energy & enstrophy scheme 331 nn_een_e3f = 1 ! e3f = masked averaging of e3t divided by 4 (=0) or by the sum of mask (=1) 309 332 / 310 333 !----------------------------------------------------------------------- … … 315 338 / 316 339 !----------------------------------------------------------------------- 317 !namdyn_spg ! surface pressure gradient (CPP key only) 318 !----------------------------------------------------------------------- 319 ! ! explicit free surface ("key_dynspg_exp") 320 ! ! filtered free surface ("key_dynspg_flt") 321 ! ! split-explicit free surface ("key_dynspg_ts") 322 340 &namdyn_spg ! surface pressure gradient 341 !----------------------------------------------------------------------- 342 ln_dynspg_ts = .true. ! split-explicit free surface 343 ln_bt_auto = .false. ! Number of sub-step defined from: 344 nn_baro = 30 ! =F : the number of sub-step in rn_rdt seconds 345 / 323 346 !----------------------------------------------------------------------- 324 347 &namdyn_ldf ! lateral diffusion on momentum 325 348 !----------------------------------------------------------------------- 326 349 ! ! Type of the operator : 327 ln_dynldf_bilap = .true. ! bilaplacian operator 328 ln_dynldf_lap = .false. ! bilaplacian operator 350 ! ! no diffusion: set ln_dynldf_lap=..._blp=F 351 ln_dynldf_lap = .false. ! laplacian operator 352 ln_dynldf_blp = .true. ! bilaplacian operator 329 353 ! ! Direction of action : 330 ln_dynldf_level = .true. ! iso-level 331 ln_dynldf_hor = .false. ! horizontal (geopotential) (require "key_ldfslp" in s-coord.) 332 ! Coefficient 333 rn_ahm_0_lap = 60.0 ! horizontal laplacian eddy viscosity [m2/s] 334 rn_ahm_0_blp = -1.0e+10 ! horizontal bilaplacian eddy viscosity [m4/s] 354 ln_dynldf_lev = .true. ! iso-level 355 ln_dynldf_hor = .false. ! horizontal (geopotential) 356 ln_dynldf_iso = .false. ! iso-neutral 357 ! ! Coefficient 358 nn_ahm_ijk_t = 0 ! space/time variation of eddy coef 359 ! ! =-30 read in eddy_viscosity_3D.nc file 360 ! ! =-20 read in eddy_viscosity_2D.nc file 361 ! ! = 0 constant 362 ! ! = 10 F(k)=c1d 363 ! ! = 20 F(i,j)=F(grid spacing)=c2d 364 ! ! = 30 F(i,j,k)=c2d*c1d 365 ! ! = 31 F(i,j,k)=F(grid spacing and local velocity) 366 rn_ahm_0 = 60. ! horizontal laplacian eddy viscosity [m2/s] 367 rn_ahm_b = 0. ! background eddy viscosity for ldf_iso [m2/s] 368 rn_bhm_0 = 1.0e+10 ! horizontal bilaplacian eddy viscosity [m4/s] 369 ! 370 ! Caution in 20 and 30 cases the coefficient have to be given for a 1 degree grid (~111km) 335 371 / 336 372 !----------------------------------------------------------------------- … … 350 386 !----------------------------------------------------------------------- 351 387 / 352 !------------------------------------------------------------------------353 &namzdf_kpp ! K-Profile Parameterization dependent vertical mixing ("key_zdfkpp", and optionally:354 !------------------------------------------------------------------------ "key_kppcustom" or "key_kpplktb")355 /356 388 !----------------------------------------------------------------------- 357 389 &namzdf_gls ! GLS vertical diffusion ("key_zdfgls") … … 370 402 / 371 403 !----------------------------------------------------------------------- 372 &namsol ! elliptic solver / island / free surface373 !-----------------------------------------------------------------------374 /375 !-----------------------------------------------------------------------376 404 &nammpp ! Massively Parallel Processing ("key_mpp_mpi) 377 405 !----------------------------------------------------------------------- … … 425 453 !----------------------------------------------------------------------- 426 454 / 427 !-----------------------------------------------------------------------428 &namsto ! Stochastic parametrization of EOS429 !-----------------------------------------------------------------------430 /431 !-----------------------------------------------------------------------432 &nam_vvl ! vertical coordinate options433 !-----------------------------------------------------------------------434 / -
branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/namelist_cfg
r5703 r5988 53 53 / 54 54 !----------------------------------------------------------------------- 55 &namsplit ! time splitting parameters ("key_dynspg_ts")56 !-----------------------------------------------------------------------57 /58 !-----------------------------------------------------------------------59 55 &namcrs ! Grid coarsening for dynamics output and/or 60 56 ! passive tracer coarsened online simulations … … 99 95 / 100 96 !----------------------------------------------------------------------- 101 &namcla ! cross land advection102 !-----------------------------------------------------------------------103 /104 !-----------------------------------------------------------------------105 97 &nambfr ! bottom friction 106 98 !----------------------------------------------------------------------- … … 121 113 &namtra_adv ! advection scheme for tracer 122 114 !----------------------------------------------------------------------- 115 ln_traadv_fct = .true. ! FCT scheme 116 nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order 117 nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order 118 nn_fct_zts = 0 ! > 1 , 2nd order FCT scheme with vertical sub-timestepping 119 ! ! (number of sub-timestep = nn_fct_zts) 123 120 / 124 121 !----------------------------------------------------------------------- … … 126 123 !----------------------------------------------------------------------- 127 124 / 128 !-----------------------------------------------------------------------129 &namtra_adv_mle ! mixed layer eddy parametrisation (Fox-Kemper param)130 !-----------------------------------------------------------------------131 /132 125 !---------------------------------------------------------------------------------- 133 126 &namtra_ldf ! lateral diffusion scheme for tracers 134 127 !---------------------------------------------------------------------------------- 128 ! ! Operator type: 129 ln_traldf_lap = .true. ! laplacian operator 130 ln_traldf_blp = .false. ! bilaplacian operator 131 ! ! Direction of action: 132 ln_traldf_lev = .false. ! iso-level 133 ln_traldf_hor = .false. ! horizontal (geopotential) 134 ln_traldf_iso = .true. ! iso-neutral (standard operator) 135 ln_traldf_triad = .false. ! iso-neutral (triad operator) 136 ! 137 ! ! iso-neutral options: 138 ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators) 139 rn_slpmax = 0.01 ! slope limit (both operators) 140 ln_triad_iso = .false. ! pure horizontal mixing in ML (triad only) 141 rn_sw_triad = 1 ! =1 switching triad ; =0 all 4 triads used (triad only) 142 ln_botmix_triad = .false. ! lateral mixing on bottom (triad only) 143 ! 144 ! ! Coefficients: 145 nn_aht_ijk_t = 20 ! space/time variation of eddy coef 146 ! ! =-20 (=-30) read in eddy_diffusivity_2D.nc (..._3D.nc) file 147 ! ! = 0 constant 148 ! ! = 10 F(k) =ldf_c1d 149 ! ! = 20 F(i,j) =ldf_c2d 150 ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation 151 ! ! = 30 F(i,j,k) =ldf_c2d + ldf_c1d 152 ! ! = 31 F(i,j,k,t)=F(local velocity) 153 rn_aht_0 = 2000. ! lateral eddy diffusivity (lap. operator) [m2/s] 154 rn_bht_0 = 1.e+12 ! lateral eddy diffusivity (bilap. operator) [m4/s] 155 / 156 !---------------------------------------------------------------------------------- 157 &namtra_ldfeiv ! eddy induced velocity param. 158 !---------------------------------------------------------------------------------- 159 ln_ldfeiv =.true. ! use eddy induced velocity parameterization 160 ln_ldfeiv_dia =.true. ! diagnose eiv stream function and velocities 161 rn_aeiv_0 = 2000. ! eddy induced velocity coefficient [m2/s] 162 nn_aei_ijk_t = 21 ! space/time variation of the eiv coeficient 163 ! ! =-20 (=-30) read in eddy_induced_velocity_2D.nc (..._3D.nc) file 164 ! ! = 0 constant 165 ! ! = 10 F(k) =ldf_c1d 166 ! ! = 20 F(i,j) =ldf_c2d 167 ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation 168 ! ! = 30 F(i,j,k) =ldf_c2d + ldf_c1d 135 169 / 136 170 !----------------------------------------------------------------------- … … 145 179 &namdyn_vor ! option of physics/algorithm (not control by CPP keys) 146 180 !----------------------------------------------------------------------- 181 ln_dynvor_ene = .false. ! enstrophy conserving scheme 182 ln_dynvor_ens = .false. ! energy conserving scheme 183 ln_dynvor_mix = .false. ! mixed scheme 184 ln_dynvor_een = .true. ! energy & enstrophy scheme 185 nn_een_e3f = 0 ! e3f = masked averaging of e3t divided by 4 (=0) or by the sum of mask (=1) 147 186 / 148 187 !----------------------------------------------------------------------- … … 151 190 / 152 191 !----------------------------------------------------------------------- 192 &namdyn_spg ! surface pressure gradient 193 !----------------------------------------------------------------------- 194 ln_dynspg_ts = .true. ! split-explicit free surface 195 / 196 !----------------------------------------------------------------------- 153 197 &namdyn_ldf ! lateral diffusion on momentum 154 198 !----------------------------------------------------------------------- 199 ! ! Type of the operator : 200 ! ! no diffusion: set ln_dynldf_lap=..._blp=F 201 ln_dynldf_lap = .true. ! laplacian operator 202 ln_dynldf_blp = .false. ! bilaplacian operator 203 ! ! Direction of action : 204 ln_dynldf_lev = .true. ! iso-level 205 ln_dynldf_hor = .false. ! horizontal (geopotential) 206 ln_dynldf_iso = .false. ! iso-neutral 207 ! ! Coefficient 208 nn_ahm_ijk_t = -30 ! space/time variation of eddy coef 209 ! ! =-30 read in eddy_viscosity_3D.nc file 210 ! ! =-20 read in eddy_viscosity_2D.nc file 211 ! ! = 0 constant 212 ! ! = 10 F(k)=c1d 213 ! ! = 20 F(i,j)=F(grid spacing)=c2d 214 ! ! = 30 F(i,j,k)=c2d*c1d 215 ! ! = 31 F(i,j,k)=F(grid spacing and local velocity) 216 rn_ahm_0 = 40000. ! horizontal laplacian eddy viscosity [m2/s] 217 rn_ahm_b = 0. ! background eddy viscosity for ldf_iso [m2/s] 218 rn_bhm_0 = 1.e+12 ! horizontal bilaplacian eddy viscosity [m4/s] 155 219 / 156 220 !----------------------------------------------------------------------- … … 169 233 &namzdf_tmx ! tidal mixing parameterization ("key_zdftmx") 170 234 !----------------------------------------------------------------------- 171 /172 !-----------------------------------------------------------------------173 &namsol ! elliptic solver / island / free surface174 !-----------------------------------------------------------------------175 nn_solv = 2 ! elliptic solver: =2 successive-over-relaxation (sor)176 235 / 177 236 !----------------------------------------------------------------------- -
branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/namelist_top_cfg
r5703 r5988 5 5 &namtrc_run ! run information 6 6 !----------------------------------------------------------------------- 7 ! ln_top_euler = .true. ! use Euler time-stepping for TOP8 7 / 9 8 !----------------------------------------------------------------------- … … 64 63 &namtrc_adv ! advection scheme for passive tracer 65 64 !----------------------------------------------------------------------- 66 ln_trcadv_ tvd = .false. ! TVDscheme67 ln_trcadv_muscl = .true. ! MUSCL scheme65 ln_trcadv_mus = .true. ! MUSCL scheme 66 ln_mus_ups = .false. ! use upstream scheme near river mouths 68 67 / 69 68 !----------------------------------------------------------------------- … … 88 87 !----------------------------------------------------------------------- 89 88 / 90 !-----------------------------------------------------------------------91 &namtrc_dmp ! passive tracer newtonian damping92 !-----------------------------------------------------------------------93 /94 !-----------------------------------------------------------------------95 89 &namtrc_ice ! Representation of sea ice growth & melt effects 96 90 !----------------------------------------------------------------------- -
branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/trusting.sh
r5934 r5988 54 54 ## If -v|--version option has been set, modify default SVN action on directories 55 55 if [ $( echo ${TRUS_SVNV} | grep "HEAD\|up\|update" ) ]; then 56 TRUS_SVNA='svn update -r HEAD '56 TRUS_SVNA='svn update -r HEAD --accept=theirs-conflict' 57 57 elif [ $( echo ${TRUS_SVNV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' ) ]; then 58 58 TRUS_SVNA='svn update -r '$( echo ${TRUS_SVNV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' )
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