Index: branches/2015/dev_r5803_UKMO_AGRIF_Vert_interp/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/1_namelist_cfg
===================================================================
--- branches/2015/dev_r5803_UKMO_AGRIF_Vert_interp/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/1_namelist_cfg	(revision 6401)
+++ branches/2015/dev_r5803_UKMO_AGRIF_Vert_interp/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/1_namelist_cfg	(revision 6404)
@@ -28,4 +28,5 @@
 &namzgr        !   vertical coordinate
 !-----------------------------------------------------------------------
+   ln_zps      = .true.    !  z-coordinate - partial steps
 /
 !-----------------------------------------------------------------------
@@ -51,10 +52,4 @@
    ppacr2      =  999999.              !
    rn_rdt      = 2880.     !  time step for the dynamics (and tracer if nn_acc=0)
-   rn_rdtmin   = 14400.          !  minimum time step on tracers (used if nn_acc=1)
-   rn_rdtmax   = 14400.          !  maximum time step on tracers (used if nn_acc=1)
-/
-!-----------------------------------------------------------------------
-&namsplit      !   time splitting parameters                            ("key_dynspg_ts")
-!-----------------------------------------------------------------------
 /
 !-----------------------------------------------------------------------
@@ -116,8 +111,4 @@
 /
 !-----------------------------------------------------------------------
-&namcla        !   cross land advection
-!-----------------------------------------------------------------------
-/
-!-----------------------------------------------------------------------
 &namagrif      !  AGRIF zoom                                            ("key_agrif")
 !-----------------------------------------------------------------------
@@ -130,4 +121,5 @@
 &nambbc        !   bottom temperature boundary condition
 !-----------------------------------------------------------------------
+   ln_trabbc   = .true.    !  Apply a geothermal heating at the ocean bottom
 /
 !-----------------------------------------------------------------------
@@ -145,13 +137,47 @@
 /
 !-----------------------------------------------------------------------
-&namtra_adv    !   advection scheme for tracer 
-!-----------------------------------------------------------------------
-/
-!-----------------------------------------------------------------------
-&namtra_ldf    !   lateral diffusion scheme for tracers 
-!-----------------------------------------------------------------------
-
-   rn_aht_0         =  1000.    !  horizontal eddy diffusivity for tracers [m2/s]
-   rn_aeiv_0        =     0.    !  eddy induced velocity coefficient [m2/s]    (require "key_traldf_eiv")
+&namtra_adv    !   advection scheme for tracer
+!-----------------------------------------------------------------------
+   ln_traadv_fct =  .true.    !  FCT scheme
+      nn_fct_h   =  2               !  =2/4, horizontal 2nd / 4th order 
+      nn_fct_v   =  2               !  =2/4, vertical   2nd / COMPACT 4th order 
+      nn_fct_zts =  0               !  >=1,  2nd order FCT scheme with vertical sub-timestepping
+      !                             !        (number of sub-timestep = nn_fct_zts)
+/
+!-----------------------------------------------------------------------
+&namtra_ldf    !   lateral diffusion scheme for tracers
+!----------------------------------------------------------------------------------
+   !                       !  Operator type:
+   ln_traldf_lap   =  .true.   !    laplacian operator
+   ln_traldf_blp   =  .false.  !  bilaplacian operator
+   !                       !  Direction of action:
+   ln_traldf_lev   =  .false.  !  iso-level
+   ln_traldf_hor   =  .false.  !  horizontal (geopotential)
+   ln_traldf_iso   =  .true.   !  iso-neutral (Standard operator)
+   ln_traldf_triad =  .false.  !  iso-neutral (Triads   operator)
+   !
+   !		       	         !  iso-neutral options:        
+   ln_traldf_msc   =  .true.   !  Method of Stabilizing Correction (both operators)
+   rn_slpmax       =   0.01    !  slope limit                      (both operators)
+   ln_triad_iso    =  .false.  !  pure horizontal mixing in ML              (triad only)
+   rn_sw_triad     =  1        !  =1 switching triad ; =0 all 4 triads used (triad only)
+   ln_botmix_triad =  .false.  !  lateral mixing on bottom                  (triad only)
+   !
+   !                       !  Coefficients:
+   nn_aht_ijk_t    = 20        !  space/time variation of eddy coef
+   !                                !   =-20 (=-30)    read in eddy_diffusivity_2D.nc (..._3D.nc) file
+   !                                !   =  0           constant 
+   !                                !   = 10 F(k)      =ldf_c1d 
+   !                                !   = 20 F(i,j)    =ldf_c2d 
+   !                                !   = 21 F(i,j,t)  =Treguier et al. JPO 1997 formulation
+   !                                !   = 30 F(i,j,k)  =ldf_c2d + ldf_c1d
+   !                                !   = 31 F(i,j,k,t)=F(local velocity)
+   rn_aht_0        = 1000.     !  lateral eddy diffusivity   (lap. operator) [m2/s]
+   rn_bht_0        = 1.e+12    !  lateral eddy diffusivity (bilap. operator) [m4/s]
+/
+!----------------------------------------------------------------------------------
+&namtra_ldfeiv !   eddy induced velocity param.
+!----------------------------------------------------------------------------------
+   ln_ldfeiv     =.false.   ! use eddy induced velocity parameterization
 /
 !-----------------------------------------------------------------------
@@ -162,4 +188,10 @@
 &namdyn_vor    !   option of physics/algorithm (not control by CPP keys)
 !-----------------------------------------------------------------------
+   ln_dynvor_ene = .false. !  enstrophy conserving scheme
+   ln_dynvor_ens = .false. !  energy conserving scheme
+   ln_dynvor_mix = .false. !  mixed scheme
+   ln_dynvor_een = .true.  !  energy & enstrophy scheme
+      nn_een_e3f = 0             !  e3f = masked averaging of e3t divided by 4 (=0) or by the sum of mask (=1)
+   ln_dynvor_msk = .false. !  vorticity multiplied by fmask (=T) or not (=F) (all vorticity schemes)
 /
 !-----------------------------------------------------------------------
@@ -168,10 +200,31 @@
 /
 !-----------------------------------------------------------------------
+&namdyn_spg    !   surface pressure gradient
+!-----------------------------------------------------------------------
+   ln_dynspg_ts  = .true.  !  split-explicit free surface
+/
+!-----------------------------------------------------------------------
 &namdyn_ldf    !   lateral diffusion on momentum
 !-----------------------------------------------------------------------
-   !                       !  Type of the operator : 
-   ln_dynldf_lap    =  .false.  !  laplacian operator         
-   ln_dynldf_bilap  =  .true.   !  bilaplacian operator    
-   rn_ahm_0_blp     = -8.5e+11  !  horizontal bilaplacian eddy viscosity [m4/s] 
+   !                       !  Type of the operator :
+   !                           !  no diffusion: set ln_dynldf_lap=..._blp=F 
+   ln_dynldf_lap =  .false.    !    laplacian operator
+   ln_dynldf_blp =  .true.     !  bilaplacian operator
+   !                       !  Direction of action  :
+   ln_dynldf_lev =  .true.     !  iso-level
+   ln_dynldf_hor =  .false.    !  horizontal (geopotential)
+   ln_dynldf_iso =  .false.    !  iso-neutral
+   !                       !  Coefficient
+   nn_ahm_ijk_t  = 20          !  space/time variation of eddy coef
+   !                                !  =-30  read in eddy_viscosity_3D.nc file
+   !                                !  =-20  read in eddy_viscosity_2D.nc file
+   !                                !  =  0  constant 
+   !                                !  = 10  F(k)=c1d
+   !                                !  = 20  F(i,j)=F(grid spacing)=c2d
+   !                                !  = 30  F(i,j,k)=c2d*c1d
+   !                                !  = 31  F(i,j,k)=F(grid spacing and local velocity)
+   rn_ahm_0      =  40000.     !  horizontal laplacian eddy viscosity   [m2/s]
+   rn_ahm_b      =      0.     !  background eddy viscosity for ldf_iso [m2/s]
+   rn_bhm_0      = 8.5e+11     !  horizontal bilaplacian eddy viscosity [m4/s]
 /
 !-----------------------------------------------------------------------
@@ -193,8 +246,4 @@
 /
 !-----------------------------------------------------------------------
-&namsol        !   elliptic solver / island / free surface 
-!-----------------------------------------------------------------------
-/
-!-----------------------------------------------------------------------
 &nammpp        !   Massively Parallel Processing                        ("key_mpp_mpi)
 !-----------------------------------------------------------------------
@@ -217,8 +266,4 @@
 /
 !-----------------------------------------------------------------------
-&namdyn_nept  !   Neptune effect (simplified: lateral and vertical diffusions removed)
-!-----------------------------------------------------------------------
-/
-!-----------------------------------------------------------------------
 &namobs       !  observation usage                                      ('key_diaobs')
 !-----------------------------------------------------------------------
