Changeset 7443 for branches/2016
- Timestamp:
- 2016-12-02T13:05:21+01:00 (7 years ago)
- Location:
- branches/2016/dev_merge_2016/NEMOGCM/CONFIG
- Files:
-
- 5 added
- 7 deleted
- 1 edited
-
GYRE_XIOS/EXP00/domain_def.xml (deleted)
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GYRE_XIOS/EXP00/field_def.xml (deleted)
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GYRE_XIOS/EXP00/iodef.xml (deleted)
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ORCA2_LIM3_PISCES/EXP00/ForXIOS2 (added)
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SAS_BIPER/EXP00/domain_def.xml (deleted)
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SAS_BIPER/EXP00/field_def.xml (deleted)
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SAS_BIPER/EXP00/iodef.xml (modified) (1 diff)
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SHARED/ForXIOS2/domain_def.xml (deleted)
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SHARED/ForXIOS2/domain_def_nemo.xml (added)
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SHARED/ForXIOS2/field_def.xml (deleted)
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SHARED/ForXIOS2/field_def_nemo-lim.xml (added)
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SHARED/ForXIOS2/field_def_nemo-opa.xml (added)
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SHARED/ForXIOS2/field_def_nemo-pisces.xml (added)
Legend:
- Unmodified
- Added
- Removed
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branches/2016/dev_merge_2016/NEMOGCM/CONFIG/SAS_BIPER/EXP00/iodef.xml
r7355 r7443 2 2 <simulation> 3 3 4 <context id="nemo" time_origin="1950-01-01 00:00:00" > 5 6 <!-- $id$ --> 7 8 <!-- 9 ============================================================================================================ 10 = definition of all existing variables = 11 = DO NOT CHANGE = 12 ============================================================================================================ 13 --> 14 <field_definition src="./field_def.xml"/> 15 <!-- 16 ============================================================================================================ 17 = output files definition = 18 = Define your own files = 19 = put the variables you want... = 20 ============================================================================================================ 21 --> 22 23 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4"> 24 25 <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> 26 <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files --> 27 <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files --> 28 <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> 29 <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> 30 <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> 31 <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files --> 32 <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> 4 <!-- ============================================================================================ --> 5 <!-- XIOS context --> 6 <!-- ============================================================================================ --> 33 7 34 <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE." > <!-- 5d files --> 35 36 <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > 37 <field field_ref="e3t" /> 38 <field field_ref="toce" name="thetao" operation="instant" freq_op="5d" > @toce_e3t / @e3t </field> 39 <field field_ref="soce" name="so" operation="instant" freq_op="5d" > @soce_e3t / @e3t </field> 40 <field field_ref="sst" name="tos" /> 41 <field field_ref="sss" name="sos" /> 42 <field field_ref="ssh" name="zos" /> 43 <field field_ref="sst" name="tosstd" long_name="sea surface temperature standard deviation" operation="instant" freq_op="5d" > sqrt( @sst2 - @sst * @sst ) </field> 44 <field field_ref="ssh" name="zosstd" long_name="sea surface height above geoid standard deviation" operation="instant" freq_op="5d" > sqrt( @ssh2 - @ssh * @ssh ) </field> 45 <field field_ref="sst" name="sstdcy" long_name="amplitude of sst diurnal cycle" operation="average" freq_op="1d" > @sstmax - @sstmin </field> 46 <field field_ref="mldkz5" /> 47 <field field_ref="mldr10_1" /> 48 <field field_ref="mldr10_1" name="mldr10_1dcy" long_name="amplitude of mldr10_1 diurnal cycle" operation="average" freq_op="1d" > @mldr10_1max - @mldr10_1min </field> 49 <field field_ref="empmr" name="wfo" /> 50 <field field_ref="qsr" name="rsntds" /> 51 <field field_ref="qt" name="tohfls" /> 52 <field field_ref="saltflx" name="sosflxdo" /> 53 <field field_ref="taum" /> 54 <field field_ref="wspd" name="sowindsp" /> 55 <field field_ref="precip" name="soprecip" /> 56 <field field_ref="sbt" /> 57 </file> 58 59 <file id="file3" name_suffix="_grid_U" description="ocean U grid variables" > 60 <field field_ref="e3u" /> 61 <field field_ref="ssu" name="uos" /> 62 <field field_ref="uoce" name="uo" operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field> 63 <field field_ref="utau" name="tauuo" /> 64 </file> 65 66 <file id="file4" name_suffix="_grid_V" description="ocean V grid variables" > 67 <field field_ref="e3v" /> 68 <field field_ref="ssv" name="vos" /> 69 <field field_ref="voce" name="vo" operation="instant" freq_op="5d" > @voce_e3v / @e3v </field> 70 <field field_ref="vtau" name="tauvo" /> 71 </file> 72 73 <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" > 74 <field field_ref="e3w" /> 75 <field field_ref="woce" name="wo" /> 76 <field field_ref="avt" name="difvho" /> 77 </file> 78 79 <file id="file6" name_suffix="_icemod" description="ice variables" > 80 <field field_ref="ice_pres" /> 81 <field field_ref="snowthic_cea" name="snd" /> 82 <field field_ref="icethic_cea" name="sit" /> 83 <field field_ref="iceprod_cea" name="sip" /> 84 <field field_ref="ist_ipa" /> 85 <field field_ref="uice_ipa" /> 86 <field field_ref="vice_ipa" /> 87 <field field_ref="utau_ice" /> 88 <field field_ref="vtau_ice" /> 89 <field field_ref="qsr_io_cea" /> 90 <field field_ref="qns_io_cea" /> 91 <field field_ref="snowpre" /> 92 </file> 93 94 <!-- 95 <file id="file8" name_suffix="_Tides" description="tidal harmonics" > 96 <field field_ref="M2x" name="M2x" long_name="M2 Elevation harmonic real part" /> 97 <field field_ref="M2y" name="M2y" long_name="M2 Elevation harmonic imaginary part" /> 98 <field field_ref="M2x_u" name="M2x_u" long_name="M2 current barotrope along i-axis harmonic real part " /> 99 <field field_ref="M2y_u" name="M2y_u" long_name="M2 current barotrope along i-axis harmonic imaginary part " /> 100 <field field_ref="M2x_v" name="M2x_v" long_name="M2 current barotrope along j-axis harmonic real part " /> 101 <field field_ref="M2y_v" name="M2y_v" long_name="M2 current barotrope along j-axis harmonic imaginary part " /> 102 </file> 103 --> 104 105 </file_group> 106 107 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files --> 108 <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files --> 109 <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files --> 110 <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files --> 111 <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files --> 112 113 <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files --> 114 <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files --> 115 <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files --> 116 <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files --> 117 118 </file_definition> 119 120 <!-- 121 ============================================================================================================ 122 = grid definition = = DO NOT CHANGE = 123 ============================================================================================================ 124 --> 125 126 <axis_definition> 127 <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> 128 <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> 129 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> 130 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> 131 <axis id="nfloat" long_name="Float number" unit="1" /> 132 <axis id="icbcla" long_name="Iceberg class" unit="1" /> 133 <axis id="ncatice" long_name="Ice category" unit="1" /> 134 <axis id="iax_20C" long_name="20 degC isotherm" unit="degC" /> 135 <axis id="iax_28C" long_name="28 degC isotherm" unit="degC" /> 136 </axis_definition> 137 138 <domain_definition src="./domain_def.xml"/> 139 140 <grid_definition> 141 <grid id="grid_T_2D" domain_ref="grid_T"/> 142 <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/> 143 <grid id="grid_U_2D" domain_ref="grid_U"/> 144 <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/> 145 <grid id="grid_V_2D" domain_ref="grid_V"/> 146 <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/> 147 <grid id="grid_W_2D" domain_ref="grid_W"/> 148 <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/> 149 <grid id="gznl_T_2D" domain_ref="gznl"/> 150 <grid id="gznl_T_3D" domain_ref="gznl" axis_ref="deptht"/> 151 <grid id="gznl_W_3D" domain_ref="gznl" axis_ref="depthw"/> 152 </grid_definition> 153 </context> 154 155 <context id="1_nemo" time_origin="1950-01-01 00:00:00" > 156 157 <!-- $id$ --> 158 159 <!-- 160 ============================================================================================================ 161 = definition of all existing variables = 162 = DO NOT CHANGE = 163 ============================================================================================================ 164 --> 165 <field_definition src="./field_def.xml"/> 166 <!-- 167 ============================================================================================================ 168 = output files definition = 169 = Define your own files = 170 = put the variables you want... = 171 ============================================================================================================ 172 --> 173 174 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4"> 175 176 <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> 177 <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files --> 178 <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files --> 179 <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> 180 <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> 181 <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> 182 <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files --> 183 <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> 184 185 <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE." > <!-- 5d files --> 186 187 <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > 188 <field field_ref="sst" name="tos" long_name="sea_surface_temperature" /> 189 <field field_ref="sss" name="sos" long_name="sea_surface_salinity" /> 190 <field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" /> 191 <field field_ref="toce" name="thetao" long_name="sea_water_potential_temperature" /> 192 <field field_ref="soce" name="so" long_name="sea_water_salinity" /> 193 <field field_ref="sst2" name="tossq" long_name="square_of_sea_surface_temperature" /> 194 <field field_ref="ssh2" name="zossq" long_name="square_of_sea_surface_height_above_geoid" /> 195 <field field_ref="mldkz5" /> 196 <field field_ref="mldr10_1" /> 197 <field field_ref="empmr" name="wfo" long_name="water_flux_into_sea_water" /> 198 <field field_ref="qsr" name="rsntds" long_name="surface_net_downward_shortwave_flux" /> 199 <field field_ref="qt" name="tohfls" long_name="surface_net_downward_total_heat_flux" /> 200 <field field_ref="saltflx" name="sosflxdo" /> 201 <field field_ref="taum" name="taum" /> 202 <field field_ref="wspd" name="sowindsp" /> 203 <field field_ref="precip" name="soprecip" /> 204 </file> 205 206 <file id="file3" name_suffix="_grid_U" description="ocean U grid variables" > 207 <field field_ref="ssu" name="uos" long_name="sea_surface_x_velocity" /> 208 <field field_ref="uoce" name="uo" long_name="sea_water_x_velocity" /> 209 <field field_ref="utau" name="tauuo" long_name="surface_downward_x_stress" /> 210 <!-- variables available with MLE 211 <field field_ref="psiu_mle" name="psiu_mle" long_name="MLE_streamfunction_along_i-axis" /> 212 --> 213 </file> 214 215 <file id="file4" name_suffix="_grid_V" description="ocean V grid variables" > 216 <field field_ref="ssv" name="vos" long_name="sea_surface_y_velocity" /> 217 <field field_ref="voce" name="vo" long_name="sea_water_y_velocity" /> 218 <field field_ref="vtau" name="tauvo" long_name="surface_downward_y_stress" /> 219 <!-- variables available with MLE 220 <field field_ref="psiv_mle" name="psiv_mle" long_name="MLE_streamfunction_along_j-axis" /> 221 --> 222 </file> 223 224 <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" > 225 <field field_ref="woce" name="wo" long_name="ocean vertical velocity" /> 226 <field field_ref="avt" name="difvho" long_name="ocean_vertical_heat_diffusivity" /> 227 </file> 228 <!-- 229 <file id="file6" name_suffix="_icemod" description="ice variables" > 230 <field field_ref="ice_pres" /> 231 <field field_ref="snowthic_cea" name="snd" long_name="surface_snow_thickness" /> 232 <field field_ref="icethic_cea" name="sit" long_name="sea_ice_thickness" /> 233 <field field_ref="iceprod_cea" name="sip" long_name="sea_ice_thickness" /> 234 <field field_ref="ist_ipa" /> 235 <field field_ref="uice_ipa" /> 236 <field field_ref="vice_ipa" /> 237 <field field_ref="utau_ice" /> 238 <field field_ref="vtau_ice" /> 239 <field field_ref="qsr_io_cea" /> 240 <field field_ref="qns_io_cea" /> 241 <field field_ref="snowpre" /> 242 </file> 243 244 <file id="file8" name_suffix="_Tides" description="tidal harmonics" > 245 <field field_ref="M2x" name="M2x" long_name="M2 Elevation harmonic real part" /> 246 <field field_ref="M2y" name="M2y" long_name="M2 Elevation harmonic imaginary part" /> 247 <field field_ref="M2x_u" name="M2x_u" long_name="M2 current barotrope along i-axis harmonic real part " /> 248 <field field_ref="M2y_u" name="M2y_u" long_name="M2 current barotrope along i-axis harmonic imaginary part " /> 249 <field field_ref="M2x_v" name="M2x_v" long_name="M2 current barotrope along j-axis harmonic real part " /> 250 <field field_ref="M2y_v" name="M2y_v" long_name="M2 current barotrope along j-axis harmonic imaginary part " /> 251 </file> 252 --> 253 </file_group> 254 255 256 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files --> 257 258 259 <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files --> 260 <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files --> 261 <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files --> 262 <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files --> 263 264 <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files --> 265 <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files --> 266 <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files --> 267 <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files --> 268 269 </file_definition> 270 271 <!-- 272 ============================================================================================================ 273 = grid definition = = DO NOT CHANGE = 274 ============================================================================================================ 275 --> 276 277 <axis_definition> 278 <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> 279 <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> 280 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> 281 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> 282 <axis id="nfloat" long_name="Float number" unit="-" /> 283 <axis id="icbcla" long_name="Iceberg class" unit="-" /> 284 </axis_definition> 285 286 <domain_definition src="./domain_def.xml"/> 287 288 <grid_definition> 289 <grid id="grid_T_2D" domain_ref="grid_T"/> 290 <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/> 291 <grid id="grid_U_2D" domain_ref="grid_U"/> 292 <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/> 293 <grid id="grid_V_2D" domain_ref="grid_V"/> 294 <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/> 295 <grid id="grid_W_2D" domain_ref="grid_W"/> 296 <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/> 297 </grid_definition> 298 </context> 299 300 <context id="xios"> 8 <context id="xios" > 301 9 302 10 <variable_definition> 303 304 <!-- 305 We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size) 306 --> 307 <variable id="buffer_size" type="integer">50000000</variable> 308 <variable id="buffer_server_factor_size" type="integer">2</variable> 309 <variable id="info_level" type="integer">0</variable> 310 <variable id="using_server" type="boolean">false</variable> 311 <variable id="using_oasis" type="boolean">false</variable> 11 12 <!-- 13 <variable id="optimal_buffer_size" type="string">memory</variable> 14 <variable id="buffer_size_factor" type="double">1.0</variable> 15 --> 16 <variable id="info_level" type="int">10</variable> 17 <variable id="using_server" type="bool">true</variable> 18 <variable id="using_oasis" type="bool">false</variable> 312 19 <variable id="oasis_codes_id" type="string" >oceanx</variable> 313 20 314 21 </variable_definition> 315 316 22 </context> 317 23 24 <!-- ============================================================================================ --> 25 <!-- NEMO CONTEXT add and suppress the components you need --> 26 <!-- ============================================================================================ --> 27 28 <context id="nemo" src="./context_nemo.xml"/> <!-- NEMO --> 29 <context id="1_nemo" src="./1_context_nemo.xml"/> 30 <!-- 31 <context id="2_nemo" src="./2_context_nemo.xml"/> 32 --> 318 33 </simulation>
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