Changeset 8834 for branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inc/trusting.env

Timestamp:

2017-11-28T15:01:16+01:00 (6 years ago)

Author:

nicolasmartin

Message:

Cleaning of main script 'trusting.sh': transfer code lines to 'trusting_func.sh' with new functions, improve overall readability

File:

• branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inc/trusting.env (modified) (9 diffs)

branches/2015/dev_r5092_CNRS18_TRUST/NEMOGCM/TRUST/inc/trusting.env

@@ -2 +2 @@
 
 
+##--------------------------------------------------------------------------------
 ## Defaults
 ##--------------------------------------------------------------------------------
 
+## Trusting result: 'FAILED' result for 'Unknown error'
+export TRUST_FLAG_RESULT='FAILED' TRUST_FLAG_ERROR='X'
+
+## Locked options from command line (export as of now to environment) 
+##-------------------------------------------------------------------
+
+if [ ${TRUST_FLAG_DEBUG} == 'true' ]; then
+    ## debug mode (verbose output and skip XIOS compilation)
+    TRUST_IO_XIOS_MODE=''
+    TRUST_MAIN_STDOUT='1> /dev/null'
+else
+    ## std mode (merge stdout & stderr to /dev/null, XIOS compilation from scratch)
+    TRUST_IO_XIOS_MODE='--full'
+    TRUST_MAIN_STDOUT='>& /dev/null'
+fi
+
+export TRUST_IO_XIOS_MODE TRUST_MAIN_STDOUT
+
+## If '-v' arg. has been set, modify default SVN action on working copy
+if [ ${TRUST_SVN_REV} ]; then
+
+    if   [ $( echo ${TRUST_SVN_REV} | grep  "HEAD\|up\|update"                     ) ]; then
+   TRUST_SVN_ACTION='svn update -r HEAD --accept mine-conflict'
+    elif [ $( echo ${TRUST_SVN_REV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' ) ]; then
+   TRUST_SVN_ACTION='svn update -r     '$( echo ${TRUST_SVN_REV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' )
+    elif [ $( echo ${TRUST_SVN_REV} | grep -o '[0-9]*'                             ) ]; then
+   TRUST_SVN_ACTION='svn update -r     '$( echo ${TRUST_SVN_REV} | grep -o '[0-9]*' )
+    fi
+
+else
+    ## By default, no update on SVN directories
+    TRUST_SVN_ACTION='svn status'
+fi
+
+export TRUST_SVN_ACTION
+
+
+## Options editable by .cfg files (no export at this time)
+##--------------------------------------------------------
+
+## NEMO 'trunk' branch by default
 [ -z "${TRUST_SVN_BRANCH}" ] && TRUST_SVN_BRANCH='trunk'
 
 ## Ref. cfg. unset or empty (mandatory)
-if [[ -z "${TRUST_CFG_REF}" ]]; then
+if [ -z "${TRUST_CFG_REF}" ]; then
 
     ## Default cfg from trunk excepting last stable
     TRUST_CFG_REF='ORCA2_LIM3_PISCES'
 
-    if [[ ${TRUST_SVN_BRANCH} && ${TRUST_SVN_BRANCH} == 'nemo_v3_6_STABLE' ]]; then
+    if [[ ${TRUST_SVN_BRANCH}                          \
+     && ${TRUST_SVN_BRANCH} == 'nemo_v3_6_STABLE'   ]]; then
    TRUST_CFG_REF='ORCA2_LIM_PISCES'
     fi
@@ -20 +63 @@
 
 
+##--------------------------------------------------------------------------------
 ## Source user & (super)computer configurations
 ##--------------------------------------------------------------------------------
@@ -26 +70 @@
 
 
+##--------------------------------------------------------------------------------
 ## Checking and export environment variables
 ##--------------------------------------------------------------------------------
@@ -40 +85 @@
 ##------------------------------------------
 
-export TRUST_SVN_REPO='https://forge.ipsl.jussieu.fr/nemo/svn'
+export TRUST_SVN_REPO='https://forge.ipsl.jussieu.fr'
 export TRUST_SVN_CO=( 'ARCH           CONFIG          NEMO              
                        EXTERNAL/AGRIF EXTERNAL/fcm    EXTERNAL/IOIPSL   
@@ -65 +110 @@
    [ ${TRUST_CFG_REF} == 'AMM12' ] && TRUST_IO_FORC_TAR='AMM12_v3.7.tar'
 
+   ## Update forcing archive for stable
    if [ ${TRUST_SVN_BRANCH} == 'nemo_v3_6_STABLE' ]; then
        TRUST_IO_FORC_TAR='ORCA2_LIM_nemo_v3.6.tar'
@@ -97 +143 @@
 ##----------------------
 
+## Assuming the sourcing of XIOS arch .env file (modules) for setting 
 if [ -z "${TRUST_JOB_ENV}" ]; then
     TRUST_JOB_ENV=${TRUST_IO_XIOS}/arch/arch-${TRUST_MAIN_HPCC}.env
@@ -103 +150 @@
 export TRUST_JOB_ENV
 
+## Default parallel compilation on 4 procs
 [ -z "${TRUST_COMPILE_NPROC}" ] && TRUST_COMPILE_NPROC='4'
 export TRUST_COMPILE_NPROC
 
+## Not mandatory
 export TRUST_COMPILE_FORTRAN TRUST_COMPILE_MPI TRUST_COMPILE_NETCDF
 
+## Assuming the job submit script is in './batch', if not 
 if [ -z "${TRUST_JOB_SCRIPT}" ]; then
     TRUST_JOB_SCRIPT=${TRUST_MAIN_DIR}/batch/${TRUST_MAIN_HPCC}.sh || get_out A
@@ -114 +164 @@
 export TRUST_JOB_SCRIPT 
 
-
+## Mandatory job management cmds (submit, status checking and killing job)
 if [[ -z "${TRUST_JOB_SUBMIT}" || -z "${TRUST_JOB_STATE}" \
                                || -z "${TRUST_JOB_KILL}"    ]]; then
@@ -122 +172 @@
 export TRUST_JOB_SUBMIT TRUST_JOB_STATE TRUST_JOB_KILL
 
+## Default test timeout to 3h (pending AND running time)
 [ -z "${TRUST_JOB_TIMEOUT}" ] && TRUST_JOB_TIMEOUT='10800'
 export TRUST_JOB_TIMEOUT
 
+## Job informations not mandatory
 export TRUST_JOB_INFO TRUST_JOB_TIME TRUST_JOB_RAM_P TRUST_JOB_RAM_V