Changeset 8841 for branches/UKMO/ROMS_WAD_7832/NEMOGCM/CONFIG/SHARED

Timestamp:

2017-11-29T05:08:05+01:00 (6 years ago)

Author:

deazer

Message:

Bring in Trunk Changes at version 8814
This revision wont run as is, requires next revision with merged changes
This revision serves as a reference point to what changes from the trunk at brought in by the merge
in the next revision

Location:

branches/UKMO/ROMS_WAD_7832/NEMOGCM/CONFIG/SHARED

Files:

• 1_namelist_ice_ref (copied) (copied from trunk/NEMOGCM/CONFIG/SHARED/1_namelist_ice_ref)
• field_def_nemo-opa.xml (modified) (9 diffs)
• namelist_ice_lim2_ref (modified) (1 prop)
• namelist_ice_lim3_ref (modified) (1 prop)
• namelist_pisces_ref (modified) (1 prop)
• namelist_ref (modified) (2 diffs, 1 prop)
• namelist_top_ref (modified) (1 prop)
• namelist_trc_ref (modified) (1 prop)

branches/UKMO/ROMS_WAD_7832/NEMOGCM/CONFIG/SHARED/field_def_nemo-opa.xml

@@ -20 +20 @@
       <field_group id="grid_T" grid_ref="grid_T_2D" >
          <field id="e3t"          long_name="T-cell thickness"   standard_name="cell_thickness"   unit="m"   grid_ref="grid_T_3D"/>
+         <field id="e3t_surf"     long_name="T-cell thickness"   field_ref="e3t"  standard_name="cell_thickness"   unit="m"   grid_ref="grid_T_SFC"/>
          <field id="e3t_0"        long_name="Initial T-cell thickness"   standard_name="ref_cell_thickness"   unit="m"   grid_ref="grid_T_3D"/>
 
@@ -207 +208 @@
 
          <!-- * variable related to ice shelf forcing * -->
-         <field id="fwfisf"       long_name="Ice shelf melting"                                            unit="Kg/m2/s"  />
+         <field id="fwfisf"       long_name="Ice shelf melting"                             unit="kg/m2/s"  />
          <field id="fwfisf3d"     long_name="Ice shelf melting"                             unit="kg/m2/s"  grid_ref="grid_T_3D" />
          <field id="qlatisf"      long_name="Ice shelf latent heat flux"                    unit="W/m2"     />
@@ -215 +216 @@
          <field id="isfgammat"    long_name="transfert coefficient for isf (temperature) "  unit="m/s"      />
          <field id="isfgammas"    long_name="transfert coefficient for isf (salinity)    "  unit="m/s"      />
-    <field id="stbl"         long_name="salinity in the Losh tbl                    "  unit="PSU"      />
+         <field id="stbl"         long_name="salinity in the Losh tbl                    "  unit="PSU"      />
          <field id="ttbl"         long_name="temperature in the Losh tbl                 "  unit="C"        />
          <field id="utbl"         long_name="zonal current in the Losh tbl at T point    "  unit="m/s"      />
@@ -238 +239 @@
          <field id="calving_cea"  long_name="Calving"                                   standard_name="water_flux_into_sea_water_from_icebergs"   unit="kg/m2/s"  />
          <field id="iceberg_cea"  long_name="Iceberg"                                   standard_name="water_flux_into_sea_water_from_icebergs"   unit="kg/m2/s"  />
-         <field id="iceshelf_cea"  long_name="Iceshelf"                                   standard_name="water_flux_into_sea_water_from_iceshelf"   unit="kg/m2/s"  />
+         <field id="iceshelf_cea" long_name="Iceshelf"                                  standard_name="water_flux_into_sea_water_from_iceshelf"   unit="kg/m2/s"  />
+
 
          <!-- available if key_oasis3 + conservative method -->
@@ -253 +255 @@
          <field id="hflx_ice_cea"  long_name="heat flux due to ice thermodynamics"                      standard_name="heat_flux_into_sea_water_due_to_sea_ice_thermodynamics"                        unit="W/m2"     />
          <field id="hflx_rnf_cea"  long_name="heat flux due to runoffs"                                 standard_name="temperature_flux_due_to_runoff_expressed_as_heat_flux_into_sea_water"          unit="W/m2"     />
-         <field id="hflx_cal_cea"  long_name="heat flux due to calving"                                 standard_name="heat_flux_into_sea_water_due_to_iceberg_thermodynamics"                        unit="W/m2"     />
+         <field id="hflx_cal_cea"  long_name="heat flux due to calving"                                 standard_name="heat_flux_into_sea_water_due_to_calving"                                       unit="W/m2"     />
+         <field id="hflx_icb_cea"  long_name="heat flux due to iceberg"                                 standard_name="heat_flux_into_sea_water_due_to_icebergs"                                      unit="W/m2"     />
+         <field id="hflx_isf_cea"  long_name="heat flux due to iceshelf"                                standard_name="heat_flux_into_sea_water_due_to_iceshelf"                                      unit="W/m2"     />
          <field id="bicemel_cea"   long_name="Rate of Melt at Sea Ice Base (cell average)"              standard_name="tendency_of_sea_ice_amount_due_to_basal_melting"                               unit="kg/m2/s"  />
          <field id="licepro_cea"   long_name="Lateral Sea Ice Growth Rate (cell average)"               standard_name="tendency_of_sea_ice_amount_due_to_lateral_growth_of_ice_floes"                 unit="kg/m2/s"  />
@@ -559 +563 @@
     -->
 
-    <field_group id="trendT" grid_ref="grid_T_3D">
-       <!-- variables available with ln_tra_trd -->
+   <!-- variables available with ln_tra_trd -->
+   <!-- Asselin trends  calculated on odd time steps-->
+   <field_group id="trendT_odd"  grid_ref="grid_T_3D">
+      <field id="ttrd_atf"      long_name="temperature-trend: asselin time filter"       unit="degree_C/s" />
+      <field id="strd_atf"      long_name="salinity   -trend: asselin time filter"       unit="0.001/s" />
+      <!-- Thickness weighted versions: -->
+      <field id="ttrd_atf_e3t"      unit="degC/s * m"  >  ttrd_atf * e3t </field>
+      <field id="strd_atf_e3t"      unit="1e-3/s * m"  >  strd_atf * e3t </field>
+      <!-- OMIP  layer-integrated trends -->
+      <field id="ttrd_atf_li"      long_name="layer integrated heat-trend: asselin time filter "       unit="W/m^2" > ttrd_atf_e3t * 1026.0 * 3991.86795711963  </field>
+      <field id="strd_atf_li"      long_name="layer integrated salt   -trend: asselin time filter "       unit="kg/(m^2 s)" > strd_atf_e3t * 1026.0 * 0.001 </field>
+    </field_group>
+
+    <!-- Other trends  calculated on even time steps-->
+    <field_group id="trendT_even" grid_ref="grid_T_3D">
        <field id="ttrd_xad"      long_name="temperature-trend: i-advection"                                                                                          unit="degC/s"                        />
        <field id="strd_xad"      long_name="salinity   -trend: i-advection"                                                                                          unit="1e-3/s"                        />
@@ -593 +610 @@
        <field id="ttrd_npc"      long_name="temperature-trend: non-penetrative conv."     unit="degC/s" />
        <field id="strd_npc"      long_name="salinity   -trend: non-penetrative conv."     unit="1e-3/s" />
-       <field id="ttrd_qns"      long_name="temperature-trend: non-solar flux + runoff"   unit="degC/s" />
-       <field id="strd_cdt"      long_name="salinity   -trend: C/D term       + runoff"   unit="degC/s" />
+       <field id="ttrd_qns"      long_name="temperature-trend: non-solar flux + runoff"   unit="degC/s" grid_ref="grid_T_2D" />
+       <field id="strd_cdt"      long_name="salinity   -trend: C/D term       + runoff"   unit="degC/s" grid_ref="grid_T_2D" />
        <field id="ttrd_qsr"      long_name="temperature-trend: solar penetr. heating"     unit="degC/s" />
        <field id="ttrd_bbc"      long_name="temperature-trend: geothermal heating"        unit="degC/s" />
-       <field id="ttrd_atf"      long_name="temperature-trend: asselin time filter"       unit="degC/s" />
-       <field id="strd_atf"      long_name="salinity   -trend: asselin time filter"       unit="1e-3/s" />
-       <field id="ttrd_tot"      long_name="temperature-trend: total model trend"         unit="degC/s" />
-       <field id="strd_tot"      long_name="salinity   -trend: total model trend"         unit="1e-3/s" />
 
        <!-- Thickness weighted versions: -->
@@ -637 +650 @@
        <field id="ttrd_qsr_e3t"      unit="degC/s * m"  >  ttrd_qsr * e3t </field>
        <field id="ttrd_bbc_e3t"      unit="degC/s * m"  >  ttrd_bbc * e3t </field>
-       <field id="ttrd_atf_e3t"      unit="degC/s * m"  >  ttrd_atf * e3t </field>
-       <field id="strd_atf_e3t"      unit="1e-3/s * m"  >  strd_atf * e3t </field>
+
+       <!-- OMIP  layer-integrated trends -->
+       <field id="ttrd_totad_li"    long_name="layer integrated heat-trend : total advection"       unit="W/m^2"     > ttrd_totad_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_totad_li"    long_name="layer integrated salt   -trend : total advection"      unit="kg/(m^2 s)"    > strd_totad_e3t * 1026.0 * 0.001  </field>
+       <field id="ttrd_evd_li"      long_name="layer integrated heat-trend : EVD convection"         unit="W/m^2"    > ttrd_evd_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_evd_li"      long_name="layer integrated salt   -trend : EVD convection"      unit="kg/(m^2 s)"  > strd_evd_e3t * 1026.0 * 0.001  </field>
+       <field id="ttrd_iso_li"      long_name="layer integrated heat-trend : isopycnal diffusion"    unit="W/m^2" > ttrd_iso_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_iso_li"      long_name="layer integrated salt   -trend : isopycnal diffusion"   unit="kg/(m^2 s)" > strd_iso_e3t * 1026.0 * 0.001  </field>
+       <field id="ttrd_zdfp_li"     long_name="layer integrated heat-trend : pure vert. diffusion"   unit="W/m^2" > ttrd_zdfp_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_zdfp_li"     long_name="layer integrated salt   -trend : pure vert. diffusion"   unit="kg/(m^2 s)" > strd_zdfp_e3t * 1026.0 * 0.001  </field>
+       <field id="ttrd_qns_li"      long_name="layer integrated heat-trend : non-solar flux + runoff"   unit="W/m^2" grid_ref="grid_T_2D"> ttrd_qns_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="ttrd_qsr_li"      long_name="layer integrated heat-trend : solar flux"   unit="W/m^2"  grid_ref="grid_T_3D"> ttrd_qsr_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="ttrd_bbl_li"      long_name="layer integrated heat-trend: bottom boundary layer "     unit="W/m^2" > ttrd_bbl_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_bbl_li"      long_name="layer integrated salt   -trend: bottom boundary layer "     unit="kg/(m^2 s)" > strd_bbl_e3t * 1026.0 * 0.001  </field>
+       <field id="ttrd_evd_li"      long_name="layer integrated heat -trend: evd convection "       unit="W/m^2" >ttrd_evd_e3t * 1026.0 * 3991.86795711963  </field>
+       <field id="strd_evd_li"      long_name="layer integrated salt -trend: evd convection "       unit="kg/(m^2 s)" > strd_evd_e3t * 1026.0 * 0.001  </field>
+
+    </field_group>
+
+    <!--  Total trends calculated every time step-->
+    <field_group id="trendT" grid_ref="grid_T_3D">
+       <field id="ttrd_tot"      long_name="temperature-trend: total model trend"         unit="degC/s" />
+       <field id="strd_tot"      long_name="salinity   -trend: total model trend"         unit="1e-3/s" />
+       <!-- Thickness weighted versions: -->
        <field id="ttrd_tot_e3t"      unit="degC/s * m"  >  ttrd_tot * e3t </field>
        <field id="strd_tot_e3t"      unit="1e-3/s * m"  >  strd_tot * e3t </field>
-
-
+       <!-- OMIP  layer-integrated total trends -->
+       <field id="ttrd_tot_li"      long_name="layer integrated heat-trend: total model trend :"         unit="W/m^2" > ttrd_tot_e3t * 1026.0 * 3991.86795711963 </field>
+       <field id="strd_tot_li"      long_name="layer integrated salt   -trend: total model trend :"         unit="kg/(m^2 s)" > strd_tot_e3t * 1026.0 * 0.001  </field>
+
+       <!-- **** these trends have not been apportioned to all/even/odd ts yet **** -->
        <!-- variables available with ln_KE_trd -->
        <field id="ketrd_hpg"     long_name="ke-trend: hydrostatic pressure gradient"          unit="W/s^3"                        />
@@ -733 +771 @@
     -->
 
+     <field_group id="TRD" >
+          <field field_ref="ttrd_totad_li"   name="opottempadvect"  />
+          <field field_ref="ttrd_iso_li"     name="opottemppmdiff"  />
+          <field field_ref="ttrd_zdfp_li"    name="opottempdiff"  />
+          <field field_ref="ttrd_evd_li"     name="opottempevd" />
+          <field field_ref="strd_evd_li"     name="osaltevd" />
+          <field field_ref="ttrd_qns_li"     name="opottempqns"  />
+          <field field_ref="ttrd_qsr_li"     name="rsdoabsorb" operation="accumulate" />
+          <field field_ref="strd_totad_li"   name="osaltadvect" />
+          <field field_ref="strd_iso_li"     name="osaltpmdiff"  />
+          <field field_ref="strd_zdfp_li"    name="osaltdiff" />
+    </field_group>
+    
     <field_group id="mooring" >
        <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"      />

branches/UKMO/ROMS_WAD_7832/NEMOGCM/CONFIG/SHARED/namelist_ref

@@ -59 +59 @@
 !!======================================================================
 !!   namcfg       parameters of the configuration
-!!   namzgr       vertical coordinate                                   (default: NO selection)
 !!   namdom       space and time domain (bathymetry, mesh, timestep)
 !!   namwad       Wetting and drying                                    (default F)
@@ -1125 +1124 @@
 /
 !-----------------------------------------------------------------------
-&namnc4        !   netcdf4 chunking and compression settings            ("key_netcdf4")
-!-----------------------------------------------------------------------
-   ln_diatmb   = .false.   !  Choose Top Middle and Bottom output or not
-/
-!-----------------------------------------------------------------------
-&nam_dia25h    !  25h Mean Output                                        (default F)
-!-----------------------------------------------------------------------
-   ln_dia25h   = .false.   ! Choose 25h mean output or not
-/
-!-----------------------------------------------------------------------
 &namnc4        !   netcdf4 chunking and compression settings             ("key_netcdf4")
 !-----------------------------------------------------------------------