Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_context_nemo.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_context_nemo.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_context_nemo.xml (revision 9464)
@@ -0,0 +1,132 @@
+
+
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+ 1800
+ 1026.0
+ 3991.86795711963
+ 0.99530670233846
+ 917.0
+ 330.0
+ 1.e20
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Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_cfg (revision 9464)
@@ -0,0 +1,314 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! NEMO/OPA : Configuration namelist used to overwrite SHARED/1_namelist_ref
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!-----------------------------------------------------------------------
+&namrun ! parameters of the run
+!-----------------------------------------------------------------------
+ cn_exp = "Nordic" ! experience name
+ nn_it000 = 1 ! first time step
+ nn_itend = 80 ! last time step
+ ln_clobber = .true. ! clobber (overwrite) an existing file
+/
+!-----------------------------------------------------------------------
+&namcfg ! parameters of the configuration
+!-----------------------------------------------------------------------
+ ln_read_cfg = .true. ! (=T) read the domain configuration file
+ ! ! (=F) user defined configuration ==>>> see usrdef(_...) modules
+ cn_domcfg = "ORCA_R05_zps_domcfg_agrif" ! domain configuration filename
+/
+!-----------------------------------------------------------------------
+&namdom ! space and time domain (bathymetry, mesh, timestep)
+!-----------------------------------------------------------------------
+ ln_linssh = .false. ! =T linear free surface ==>> model level are fixed in time
+ !
+ rn_rdt = 1440. ! time step for the dynamics (and tracer if nn_acc=0)
+/
+!-----------------------------------------------------------------------
+&namcrs ! coarsened grid (for outputs and/or TOP) (ln_crs =T)
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namtsd ! data : Temperature & Salinity
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc ! Surface Boundary Condition (surface module)
+!-----------------------------------------------------------------------
+ nn_fsbc = 1 ! frequency of surface boundary condition computation
+ ln_blk = .true. ! Bulk formulation (T => fill namsbc_blk )
+ nn_ice = 2 ! =0 no ice boundary condition ,
+ ! =1 use observed ice-cover ,
+ ! =2 or 3 automatically for LIM3 or CICE ("key_lim3" or "key_cice")
+ ln_rnf = .false. ! runoffs (T => fill namsbc_rnf)
+ ln_ssr = .false. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr)
+ nn_fwb = 0 ! FreshWater Budget: =0 unchecked
+ ! =1 global mean of e-p-r set to zero at each time step
+ ! =2 annual global mean of e-p-r set to zero
+/
+!-----------------------------------------------------------------------
+&namsbc_blk ! namsbc_blk Bulk formulae
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
+ sn_wndi = 'u_10.15JUNE2009_fill' , 6 , 'U_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bicub.nc' , 'Uwnd' , ''
+ sn_wndj = 'v_10.15JUNE2009_fill' , 6 , 'V_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bicub.nc' , 'Vwnd' , ''
+ sn_qsr = 'ncar_rad.15JUNE2009_fill' , 24 , 'SWDN_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_qlw = 'ncar_rad.15JUNE2009_fill' , 24 , 'LWDN_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_tair = 't_10.15JUNE2009_fill' , 6 , 'T_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_humi = 'q_10.15JUNE2009_fill' , 6 , 'Q_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_prec = 'ncar_precip.15JUNE2009_fill', -1 , 'PRC_MOD1', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_snow = 'ncar_precip.15JUNE2009_fill', -1 , 'SNOW' , .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_slp = 'slp.15JUNE2009_fill' , 6 , 'SLP' , .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_tdif = 'taudif_core' , 24 , 'taudif' , .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ !
+ ! ! bulk algorithm :
+ ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
+/
+!-----------------------------------------------------------------------
+&namtra_qsr ! penetrative solar radiation
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing !
+ sn_chl ='chlorophyll', -1 , 'CHLA' , .true. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , ''
+ nn_chldta = 0 ! RGB : Chl data (=1) or cst value (=0)
+/
+!-----------------------------------------------------------------------
+&namsbc_rnf ! runoffs namelist surface boundary condition
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
+ sn_rnf = 'runoff_core_monthly', -1 , 'sorunoff', .true. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_cnf = 'runoff_core_monthly', 0 , 'socoefr0', .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_s_rnf = 'runoffs' , 24 , 'rosaline', .true. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_t_rnf = 'runoffs' , 24 , 'rotemper', .true. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+ sn_dep_rnf = 'runoffs' , 0 , 'rodepth' , .false. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+/
+!-----------------------------------------------------------------------
+&namsbc_ssr ! surface boundary condition : sea surface restoring
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc_alb ! albedo parameters
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namberg ! iceberg parameters
+!-----------------------------------------------------------------------
+ ln_icebergs = .false. ! iceberg floats or not
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F ) ! 'monthly' ! filename ! pairing ! filename !
+ sn_icb = 'calving', -1 , 'calvingmask', .true. , .true. , 'yearly' , 'weights_core2_nordic1_bilin.nc' , '' , ''
+/
+!-----------------------------------------------------------------------
+&namlbc ! lateral momentum boundary condition
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namdrg ! top/bottom friction
+!-----------------------------------------------------------------------
+ ln_non_lin = .true.
+/
+!-----------------------------------------------------------------------
+&namagrif ! AGRIF zoom ("key_agrif")
+!-----------------------------------------------------------------------
+ ln_spc_dyn = .true. ! use 0 as special value for dynamics
+ rn_sponge_tra = 1440. ! coefficient for tracer sponge layer [m2/s]
+ rn_sponge_dyn = 1440. ! coefficient for dynamics sponge layer [m2/s]
+ ln_chk_bathy = .FALSE. !
+/
+!-----------------------------------------------------------------------
+&nambbc ! bottom temperature boundary condition (default: NO)
+!-----------------------------------------------------------------------
+ ln_trabbc = .true. ! Apply a geothermal heating at the ocean bottom
+/
+!-----------------------------------------------------------------------
+&nambbl ! bottom boundary layer scheme (default: NO)
+!-----------------------------------------------------------------------
+ ln_trabbl = .true. ! Bottom Boundary Layer parameterisation flag
+ nn_bbl_ldf = 1 ! diffusive bbl (=1) or not (=0)
+ nn_bbl_adv = 0 ! advective bbl (=1/2) or not (=0)
+ rn_ahtbbl = 1000. ! lateral mixing coefficient in the bbl [m2/s]
+ rn_gambbl = 10. ! advective bbl coefficient [s]
+/
+!-----------------------------------------------------------------------
+&nameos ! ocean physical parameters
+!-----------------------------------------------------------------------
+ ln_teos10 = .true. ! = Use TEOS-10 equation of state
+ ln_eos80 = .false. ! = Use EOS80
+ ln_seos = .false. ! = Use S-EOS (simplified Eq.)
+/
+!-----------------------------------------------------------------------
+&namtra_adv ! advection scheme for tracer (default: NO advection)
+!-----------------------------------------------------------------------
+ ln_traadv_ubs = .true. ! UBS scheme
+ nn_ubs_v = 2 ! =2 , vertical 2nd order FCT / COMPACT 4th order
+/
+!-----------------------------------------------------------------------
+&namtra_adv_mle ! mixed layer eddy parametrisation (Fox-Kemper param)
+!-----------------------------------------------------------------------
+/
+!----------------------------------------------------------------------------------
+&namtra_ldf ! lateral diffusion scheme for tracers
+!----------------------------------------------------------------------------------
+ ! ! Operator type:
+ ln_traldf_NONE = .true. ! No operator (no explicit advection)
+ ln_traldf_lap = .false. ! laplacian operator
+ ln_traldf_blp = .false. ! bilaplacian operator
+ ! ! Direction of action:
+ ln_traldf_lev = .false. ! iso-level
+ ln_traldf_hor = .false. ! horizontal (geopotential)
+ ln_traldf_iso = .true. ! iso-neutral (Standard operator)
+ ln_traldf_triad = .false. ! iso-neutral (Triads operator)
+ !
+ ! ! iso-neutral options:
+ ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators)
+ rn_slpmax = 0.01 ! slope limit (both operators)
+ ln_triad_iso = .false. ! pure horizontal mixing in ML (triad only)
+ rn_sw_triad = 1 ! =1 switching triad ; =0 all 4 triads used (triad only)
+ ln_botmix_triad = .false. ! lateral mixing on bottom (triad only)
+ !
+ ! ! Coefficients:
+ nn_aht_ijk_t = 31 ! space/time variation of eddy coef
+ ! ! =-20 (=-30) read in eddy_diffusivity_2D.nc (..._3D.nc) file
+ ! ! = 0 constant
+ ! ! = 10 F(k) =ldf_c1d
+ ! ! = 20 F(i,j) =ldf_c2d
+ ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation
+ ! ! = 30 F(i,j,k) =ldf_c2d + ldf_c1d
+ ! ! = 31 F(i,j,k,t)=F(local velocity)
+ rn_aht_0 = 1000. ! lateral eddy diffusivity (lap. operator) [m2/s]
+ rn_bht_0 = 1.e+12 ! lateral eddy diffusivity (bilap. operator) [m4/s]
+/
+!----------------------------------------------------------------------------------
+&namtra_ldfeiv ! eddy induced velocity param.
+!----------------------------------------------------------------------------------
+ ln_ldfeiv =.false. ! use eddy induced velocity parameterization
+/
+!-----------------------------------------------------------------------
+&namtra_dmp ! tracer: T & S newtonian damping (default: NO)
+!-----------------------------------------------------------------------
+ ln_tradmp = .false. ! add a damping termn (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&namdyn_adv ! formulation of the momentum advection (default: No selection)
+!-----------------------------------------------------------------------
+ ln_dynadv_NONE= .false. ! linear dynamics (no momentum advection)
+ ln_dynadv_vec = .false. ! vector form - 2nd centered scheme
+ nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction
+ ln_dynadv_cen2= .false. ! flux form - 2nd order centered scheme
+ ln_dynadv_ubs = .true. ! flux form - 3rd order UBS scheme
+/
+!-----------------------------------------------------------------------
+&namdyn_vor ! option of physics/algorithm (not control by CPP keys)
+!-----------------------------------------------------------------------
+ ln_dynvor_ene = .false. ! enstrophy conserving scheme
+ ln_dynvor_ens = .true. ! energy conserving scheme
+ ln_dynvor_mix = .false. ! mixed scheme
+ ln_dynvor_een = .false. ! energy & enstrophy scheme
+ nn_een_e3f = 0 ! e3f = masked averaging of e3t divided by 4 (=0) or by the sum of mask (=1)
+/
+!-----------------------------------------------------------------------
+&namdyn_hpg ! Hydrostatic pressure gradient option
+!-----------------------------------------------------------------------
+ ln_hpg_sco = .true. ! s-coordinate (standard jacobian formulation)
+/
+!-----------------------------------------------------------------------
+&namdyn_spg ! surface pressure gradient
+!-----------------------------------------------------------------------
+ ln_dynspg_ts = .true. ! split-explicit free surface
+/
+!-----------------------------------------------------------------------
+&namdyn_ldf ! lateral diffusion on momentum
+!-----------------------------------------------------------------------
+ ! ! Type of the operator :
+ ! ! no diffusion: set ln_dynldf_lap=..._blp=F
+ ln_dynldf_NONE= .true. ! No operator (i.e. no explicit diffusion)
+ ln_dynldf_lap = .false. ! laplacian operator
+ ln_dynldf_blp = .false. ! bilaplacian operator
+ ! ! Direction of action :
+ ln_dynldf_lev = .false. ! iso-level
+ ln_dynldf_hor = .false. ! horizontal (geopotential)
+ ln_dynldf_iso = .true. ! iso-neutral
+ ! ! Coefficient
+ nn_ahm_ijk_t = 31 ! space/time variation of eddy coef
+ ! ! =-30 read in eddy_viscosity_3D.nc file
+ ! ! =-20 read in eddy_viscosity_2D.nc file
+ ! ! = 0 constant
+ ! ! = 10 F(k)=c1d
+ ! ! = 20 F(i,j)=F(grid spacing)=c2d
+ ! ! = 30 F(i,j,k)=c2d*c1d
+ ! ! = 31 F(i,j,k)=F(grid spacing and local velocity)
+ rn_ahm_0 = 40000. ! horizontal laplacian eddy viscosity [m2/s]
+ rn_ahm_b = 0. ! background eddy viscosity for ldf_iso [m2/s]
+ rn_bhm_0 = 8.5e+11 ! horizontal bilaplacian eddy viscosity [m4/s]
+/
+!!======================================================================
+!! vertical physics namelists !!
+!!======================================================================
+!-----------------------------------------------------------------------
+&namzdf ! vertical physics (default: NO selection)
+!-----------------------------------------------------------------------
+ ! ! type of vertical closure
+ ln_zdfcst = .false. ! constant mixing
+ ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
+ ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke)
+ ln_zdfgls = .false. ! Generic Length Scale closure (T => fill namzdf_gls)
+ !
+ ! ! convection
+ ln_zdfevd = .true. ! Enhanced Vertical Diffusion scheme
+ nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1)
+ rn_evd = 100. ! evd mixing coefficient [m2/s]
+ !
+ ln_zdfddm = .true. ! double diffusive mixing
+ rn_avts = 1.e-4 ! maximum avs (vertical mixing on salinity)
+ rn_hsbfr = 1.6 ! heat/salt buoyancy flux ratio
+ !
+ ! ! gravity wave-driven vertical mixing
+ ln_zdfiwm = .false. ! internal wave-induced mixing (T => fill namzdf_iwm)
+ ln_zdfswm = .false. ! surface wave-induced mixing (T => ln_wave=ln_sdw=T )
+ !
+ ! ! Coefficients
+ rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if ln_zdfcst=F)
+ rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if ln_zdfcst=F)
+ nn_avb = 0 ! profile for background avt & avm (=1) or not (=0)
+ nn_havtb = 1 ! horizontal shape for avtb (=1) or not (=0)
+/
+!-----------------------------------------------------------------------
+&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namzdf_iwm ! tidal mixing parameterization (ln_zdfiwm =T)
+!-----------------------------------------------------------------------
+ nn_zpyc = 2 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2)
+ ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency
+ ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&nammpp ! Massively Parallel Processing ("key_mpp_mpi)
+!-----------------------------------------------------------------------
+ jpni = 4 ! jpni number of processors following i (set automatically if < 1)
+ jpnj = 4 ! jpnj number of processors following j (set automatically if < 1)
+ jpnij = 16 ! jpnij number of local domains (set automatically if < 1)
+/
+!-----------------------------------------------------------------------
+&namctl ! Control prints & Benchmark
+!-----------------------------------------------------------------------
+ ln_ctl = .false. ! trends control print (expensive!)
+/
+!-----------------------------------------------------------------------
+&namptr ! Poleward Transport Diagnostic
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namhsb ! Heat and salt budgets (default F)
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namobs ! observation usage ('key_diaobs')
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&nam_asminc ! assimilation increments ('key_asminc')
+!-----------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_cfg (revision 9464)
@@ -0,0 +1,86 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! ESIM namelist:
+!! 1 - Generic parameters (nampar)
+!! 2 - Ice thickness discretization (namitd)
+!! 3 - Ice dynamics (namdyn)
+!! 4 - Ice ridging/rafting (namdyn_rdgrft)
+!! 5 - Ice rheology (namdyn_rhg)
+!! 6 - Ice advection (namdyn_adv)
+!! 7 - Ice surface forcing (namforcing)
+!! 8 - Ice thermodynamics (namthd)
+!! 9 - Ice heat diffusion (namthd_zdf)
+!! 10 - Ice lateral melting (namthd_da)
+!! 11 - Ice growth in open water (namthd_do)
+!! 12 - Ice salinity (namthd_sal)
+!! 13 - Ice melt ponds (namthd_pnd)
+!! 14 - Ice initialization (namini)
+!! 15 - Ice/snow albedos (namalb)
+!! 16 - Ice diagnostics (namdia)
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!
+!------------------------------------------------------------------------------
+&nampar ! Generic parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namitd ! Ice discretization
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn ! Ice dynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rdgrft ! Ice ridging/rafting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rhg ! Ice rheology
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_adv ! Ice advection
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namforcing ! Ice surface forcing
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd ! Ice thermodynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_zdf ! Ice heat diffusion
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_da ! Ice lateral melting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_do ! Ice growth in open water
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_sal ! Ice salinity
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_pnd ! Melt ponds
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namini ! Ice initialization
+!------------------------------------------------------------------------------
+ ln_iceini = .true. ! activate ice initialization (T) or not (F)
+ rn_thres_sst = 0.5 ! max delta temp. above Tfreeze with initial ice = (sst - tfreeze)
+/
+!------------------------------------------------------------------------------
+&namalb ! albedo parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdia ! Diagnostics
+!------------------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ice_ref (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/namelist_ice_lim3_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/1_namelist_ref (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/namelist_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_context_nemo.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_context_nemo.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_context_nemo.xml (revision 9464)
@@ -0,0 +1,132 @@
+
+
+
+
+
+ 1800
+ 1026.0
+ 3991.86795711963
+ 0.99530670233846
+ 917.0
+ 330.0
+ 1.e20
+
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Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_cfg (revision 9464)
@@ -0,0 +1,313 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! NEMO/OPA : Configuration namelist used to overwrite SHARED/1_namelist_ref
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!-----------------------------------------------------------------------
+&namrun ! parameters of the run
+!-----------------------------------------------------------------------
+ cn_exp = "Nordic" ! experience name
+ nn_it000 = 1 ! first time step
+ nn_itend = 240 ! last time step
+ ln_clobber = .true. ! clobber (overwrite) an existing file
+/
+!-----------------------------------------------------------------------
+&namcfg ! parameters of the configuration
+!-----------------------------------------------------------------------
+ ln_read_cfg = .true. ! (=T) read the domain configuration file
+ ! ! (=F) user defined configuration ==>>> see usrdef(_...) modules
+ cn_domcfg = "ORCA_R017_zps_domcfg_agrif" ! domain configuration filename
+/
+!-----------------------------------------------------------------------
+&namdom ! space and time domain (bathymetry, mesh, timestep)
+!-----------------------------------------------------------------------
+ ln_linssh = .false. ! =T linear free surface ==>> model level are fixed in time
+ !
+ rn_rdt = 480. ! time step for the dynamics (and tracer if nn_acc=0)
+/
+!-----------------------------------------------------------------------
+&namcrs ! coarsened grid (for outputs and/or TOP) (ln_crs =T)
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namtsd ! data : Temperature & Salinity
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc ! Surface Boundary Condition (surface module)
+!-----------------------------------------------------------------------
+ nn_fsbc = 1 ! frequency of surface boundary condition computation
+ ln_blk = .true. ! Bulk formulation (T => fill namsbc_blk )
+ nn_ice = 2 ! =0 no ice boundary condition ,
+ ! =1 use observed ice-cover ,
+ ! =2 or 3 automatically for LIM3 or CICE ("key_lim3" or "key_cice")
+ ln_rnf = .false. ! runoffs (T => fill namsbc_rnf)
+ ln_ssr = .false. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr)
+ nn_fwb = 0 ! FreshWater Budget: =0 unchecked
+ ! =1 global mean of e-p-r set to zero at each time step
+ ! =2 annual global mean of e-p-r set to zero
+/
+!-----------------------------------------------------------------------
+&namsbc_blk ! namsbc_blk Bulk formulae
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
+ sn_wndi = 'u_10.15JUNE2009_fill' , 6 , 'U_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bicub.nc' , 'Uwnd' , ''
+ sn_wndj = 'v_10.15JUNE2009_fill' , 6 , 'V_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bicub.nc' , 'Vwnd' , ''
+ sn_qsr = 'ncar_rad.15JUNE2009_fill' , 24 , 'SWDN_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_qlw = 'ncar_rad.15JUNE2009_fill' , 24 , 'LWDN_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_tair = 't_10.15JUNE2009_fill' , 6 , 'T_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_humi = 'q_10.15JUNE2009_fill' , 6 , 'Q_10_MOD', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_prec = 'ncar_precip.15JUNE2009_fill', -1 , 'PRC_MOD1', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_snow = 'ncar_precip.15JUNE2009_fill', -1 , 'SNOW' , .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_slp = 'slp.15JUNE2009_fill' , 6 , 'SLP' , .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_tdif = 'taudif_core' , 24 , 'taudif' , .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ !
+ ! ! bulk algorithm :
+ ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
+/
+!-----------------------------------------------------------------------
+&namtra_qsr ! penetrative solar radiation
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing !
+ sn_chl ='chlorophyll', -1 , 'CHLA' , .true. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , ''
+ nn_chldta = 0 ! RGB : Chl data (=1) or cst value (=0)
+/
+!-----------------------------------------------------------------------
+&namsbc_rnf ! runoffs namelist surface boundary condition
+!-----------------------------------------------------------------------
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
+ sn_rnf = 'runoff_core_monthly', -1 , 'sorunoff', .true. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_cnf = 'runoff_core_monthly', 0 , 'socoefr0', .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_s_rnf = 'runoffs' , 24 , 'rosaline', .true. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_t_rnf = 'runoffs' , 24 , 'rotemper', .true. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+ sn_dep_rnf = 'runoffs' , 0 , 'rodepth' , .false. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+/
+!-----------------------------------------------------------------------
+&namsbc_ssr ! surface boundary condition : sea surface restoring
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc_alb ! albedo parameters
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namberg ! iceberg parameters
+!-----------------------------------------------------------------------
+ ln_icebergs = .false. ! iceberg floats or not
+! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
+! ! ! (if <0 months) ! name ! (logical) ! (T/F ) ! 'monthly' ! filename ! pairing ! filename !
+ sn_icb = 'calving', -1 , 'calvingmask', .true. , .true. , 'yearly' , 'weights_core2_nordic2_bilin.nc' , '' , ''
+/
+!-----------------------------------------------------------------------
+&namlbc ! lateral momentum boundary condition
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namdrg ! top/bottom friction
+!-----------------------------------------------------------------------
+ ln_non_lin = .true.
+/
+!-----------------------------------------------------------------------
+&namagrif ! AGRIF zoom ("key_agrif")
+!-----------------------------------------------------------------------
+ ln_spc_dyn = .true. ! use 0 as special value for dynamics
+ rn_sponge_tra = 480. ! coefficient for tracer sponge layer [m2/s]
+ rn_sponge_dyn = 480. ! coefficient for dynamics sponge layer [m2/s]
+ ln_chk_bathy = .FALSE. !
+/
+!-----------------------------------------------------------------------
+&nambbc ! bottom temperature boundary condition (default: NO)
+!-----------------------------------------------------------------------
+ ln_trabbc = .true. ! Apply a geothermal heating at the ocean bottom
+/
+!-----------------------------------------------------------------------
+&nambbl ! bottom boundary layer scheme (default: NO)
+!-----------------------------------------------------------------------
+ ln_trabbl = .true. ! Bottom Boundary Layer parameterisation flag
+ nn_bbl_ldf = 1 ! diffusive bbl (=1) or not (=0)
+ nn_bbl_adv = 0 ! advective bbl (=1/2) or not (=0)
+ rn_ahtbbl = 1000. ! lateral mixing coefficient in the bbl [m2/s]
+ rn_gambbl = 10. ! advective bbl coefficient [s]
+/
+!-----------------------------------------------------------------------
+&nameos ! ocean physical parameters
+!-----------------------------------------------------------------------
+ ln_teos10 = .true. ! = Use TEOS-10 equation of state
+ ln_eos80 = .false. ! = Use EOS80
+ ln_seos = .false. ! = Use S-EOS (simplified Eq.)
+/
+!-----------------------------------------------------------------------
+&namtra_adv ! advection scheme for tracer (default: NO advection)
+!-----------------------------------------------------------------------
+ ln_traadv_ubs = .true. ! UBS scheme
+ nn_ubs_v = 2 ! =2 , vertical 2nd order FCT / COMPACT 4th order
+/
+!-----------------------------------------------------------------------
+&namtra_adv_mle ! mixed layer eddy parametrisation (Fox-Kemper param)
+!-----------------------------------------------------------------------
+/
+!----------------------------------------------------------------------------------
+&namtra_ldf ! lateral diffusion scheme for tracers
+!----------------------------------------------------------------------------------
+ ! ! Operator type:
+ ln_traldf_NONE = .true. ! No operator (no explicit advection)
+ ln_traldf_lap = .false. ! laplacian operator
+ ln_traldf_blp = .false. ! bilaplacian operator
+ ! ! Direction of action:
+ ln_traldf_lev = .false. ! iso-level
+ ln_traldf_hor = .false. ! horizontal (geopotential)
+ ln_traldf_iso = .true. ! iso-neutral (Standard operator)
+ ln_traldf_triad = .false. ! iso-neutral (Triads operator)
+ !
+ ! ! iso-neutral options:
+ ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators)
+ rn_slpmax = 0.01 ! slope limit (both operators)
+ ln_triad_iso = .false. ! pure horizontal mixing in ML (triad only)
+ rn_sw_triad = 1 ! =1 switching triad ; =0 all 4 triads used (triad only)
+ ln_botmix_triad = .false. ! lateral mixing on bottom (triad only)
+ !
+ ! ! Coefficients:
+ nn_aht_ijk_t = 31 ! space/time variation of eddy coef
+ ! ! =-20 (=-30) read in eddy_diffusivity_2D.nc (..._3D.nc) file
+ ! ! = 0 constant
+ ! ! = 10 F(k) =ldf_c1d
+ ! ! = 20 F(i,j) =ldf_c2d
+ ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation
+ ! ! = 30 F(i,j,k) =ldf_c2d + ldf_c1d
+ ! ! = 31 F(i,j,k,t)=F(local velocity)
+ rn_aht_0 = 1000. ! lateral eddy diffusivity (lap. operator) [m2/s]
+ rn_bht_0 = 1.e+12 ! lateral eddy diffusivity (bilap. operator) [m4/s]
+/
+!----------------------------------------------------------------------------------
+&namtra_ldfeiv ! eddy induced velocity param.
+!----------------------------------------------------------------------------------
+ ln_ldfeiv =.false. ! use eddy induced velocity parameterization
+/
+!-----------------------------------------------------------------------
+&namtra_dmp ! tracer: T & S newtonian damping (default: NO)
+!-----------------------------------------------------------------------
+ ln_tradmp = .false. ! add a damping termn (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&namdyn_adv ! formulation of the momentum advection (default: No selection)
+!-----------------------------------------------------------------------
+ ln_dynadv_NONE= .false. ! linear dynamics (no momentum advection)
+ ln_dynadv_vec = .false. ! vector form - 2nd centered scheme
+ nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction
+ ln_dynadv_cen2= .false. ! flux form - 2nd order centered scheme
+ ln_dynadv_ubs = .true. ! flux form - 3rd order UBS scheme
+/
+!-----------------------------------------------------------------------
+&namdyn_vor ! option of physics/algorithm (not control by CPP keys)
+!-----------------------------------------------------------------------
+ ln_dynvor_ene = .false. ! enstrophy conserving scheme
+ ln_dynvor_ens = .true. ! energy conserving scheme
+ ln_dynvor_mix = .false. ! mixed scheme
+ ln_dynvor_een = .false. ! energy & enstrophy scheme
+ nn_een_e3f = 0 ! e3f = masked averaging of e3t divided by 4 (=0) or by the sum of mask (=1)
+/
+!-----------------------------------------------------------------------
+&namdyn_hpg ! Hydrostatic pressure gradient option
+!-----------------------------------------------------------------------
+ ln_hpg_sco = .true. ! s-coordinate (standard jacobian formulation)
+/
+!-----------------------------------------------------------------------
+&namdyn_spg ! surface pressure gradient
+!-----------------------------------------------------------------------
+ ln_dynspg_ts = .true. ! split-explicit free surface
+/
+!-----------------------------------------------------------------------
+&namdyn_ldf ! lateral diffusion on momentum
+!-----------------------------------------------------------------------
+ ! ! Type of the operator :
+ ! ! no diffusion: set ln_dynldf_lap=..._blp=F
+ ln_dynldf_NONE= .true. ! No operator (i.e. no explicit diffusion)
+ ln_dynldf_lap = .false. ! laplacian operator
+ ln_dynldf_blp = .false. ! bilaplacian operator
+ ! ! Direction of action :
+ ln_dynldf_lev = .false. ! iso-level
+ ln_dynldf_hor = .false. ! horizontal (geopotential)
+ ln_dynldf_iso = .true. ! iso-neutral
+ ! ! Coefficient
+ nn_ahm_ijk_t = 31 ! space/time variation of eddy coef
+ ! ! =-30 read in eddy_viscosity_3D.nc file
+ ! ! =-20 read in eddy_viscosity_2D.nc file
+ ! ! = 0 constant
+ ! ! = 10 F(k)=c1d
+ ! ! = 20 F(i,j)=F(grid spacing)=c2d
+ ! ! = 30 F(i,j,k)=c2d*c1d
+ ! ! = 31 F(i,j,k)=F(grid spacing and local velocity)
+ rn_ahm_0 = 40000. ! horizontal laplacian eddy viscosity [m2/s]
+ rn_ahm_b = 0. ! background eddy viscosity for ldf_iso [m2/s]
+ rn_bhm_0 = 8.5e+11 ! horizontal bilaplacian eddy viscosity [m4/s]
+/
+!!======================================================================
+!! vertical physics namelists !!
+!!======================================================================
+!-----------------------------------------------------------------------
+&namzdf ! vertical physics (default: NO selection)
+!-----------------------------------------------------------------------
+ ! ! type of vertical closure
+ ln_zdfcst = .false. ! constant mixing
+ ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
+ ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke)
+ ln_zdfgls = .false. ! Generic Length Scale closure (T => fill namzdf_gls)
+ !
+ ! ! convection
+ ln_zdfevd = .true. ! Enhanced Vertical Diffusion scheme
+ nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1)
+ rn_evd = 100. ! evd mixing coefficient [m2/s]
+ !
+ ln_zdfddm = .true. ! double diffusive mixing
+ rn_avts = 1.e-4 ! maximum avs (vertical mixing on salinity)
+ rn_hsbfr = 1.6 ! heat/salt buoyancy flux ratio
+ !
+ ! ! gravity wave-driven vertical mixing
+ ln_zdfiwm = .false. ! internal wave-induced mixing (T => fill namzdf_iwm)
+ ln_zdfswm = .false. ! surface wave-induced mixing (T => ln_wave=ln_sdw=T )
+ !
+ ! ! Coefficients
+ rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if ln_zdfcst=F)
+ rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if ln_zdfcst=F)
+ nn_avb = 0 ! profile for background avt & avm (=1) or not (=0)
+ nn_havtb = 1 ! horizontal shape for avtb (=1) or not (=0)
+/
+!-----------------------------------------------------------------------
+&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namzdf_iwm ! tidal mixing parameterization (ln_zdfiwm =T)
+!-----------------------------------------------------------------------
+ nn_zpyc = 2 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2)
+ ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency
+ ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&nammpp ! Massively Parallel Processing ("key_mpp_mpi)
+!-----------------------------------------------------------------------
+ jpni = 4 ! jpni number of processors following i (set automatically if < 1)
+ jpnj = 4 ! jpnj number of processors following j (set automatically if < 1)
+ jpnij = 16 ! jpnij number of local domains (set automatically if < 1)
+/
+!-----------------------------------------------------------------------
+&namctl ! Control prints & Benchmark
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namptr ! Poleward Transport Diagnostic
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namhsb ! Heat and salt budgets (default F)
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namobs ! observation usage ('key_diaobs')
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&nam_asminc ! assimilation increments ('key_asminc')
+!-----------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_cfg (revision 9464)
@@ -0,0 +1,86 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! ESIM namelist:
+!! 1 - Generic parameters (nampar)
+!! 2 - Ice thickness discretization (namitd)
+!! 3 - Ice dynamics (namdyn)
+!! 4 - Ice ridging/rafting (namdyn_rdgrft)
+!! 5 - Ice rheology (namdyn_rhg)
+!! 6 - Ice advection (namdyn_adv)
+!! 7 - Ice surface forcing (namforcing)
+!! 8 - Ice thermodynamics (namthd)
+!! 9 - Ice heat diffusion (namthd_zdf)
+!! 10 - Ice lateral melting (namthd_da)
+!! 11 - Ice growth in open water (namthd_do)
+!! 12 - Ice salinity (namthd_sal)
+!! 13 - Ice melt ponds (namthd_pnd)
+!! 14 - Ice initialization (namini)
+!! 15 - Ice/snow albedos (namalb)
+!! 16 - Ice diagnostics (namdia)
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!
+!------------------------------------------------------------------------------
+&nampar ! Generic parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namitd ! Ice discretization
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn ! Ice dynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rdgrft ! Ice ridging/rafting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rhg ! Ice rheology
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_adv ! Ice advection
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namforcing ! Ice surface forcing
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd ! Ice thermodynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_zdf ! Ice heat diffusion
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_da ! Ice lateral melting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_do ! Ice growth in open water
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_sal ! Ice salinity
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_pnd ! Melt ponds
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namini ! Ice initialization
+!------------------------------------------------------------------------------
+ ln_iceini = .true. ! activate ice initialization (T) or not (F)
+ rn_thres_sst = 0.5 ! max delta temp. above Tfreeze with initial ice = (sst - tfreeze)
+/
+!------------------------------------------------------------------------------
+&namalb ! albedo parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdia ! Diagnostics
+!------------------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ice_ref (revision 9464)
@@ -0,0 +1,1 @@
+link 1_namelist_ice_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/2_namelist_ref (revision 9464)
@@ -0,0 +1,1 @@
+link 1_namelist_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/AGRIF_FixedGrids.in
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/AGRIF_FixedGrids.in (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/AGRIF_FixedGrids.in (revision 9464)
@@ -0,0 +1,5 @@
+1
+124 155 109 145 4 4 4
+1
+40 80 86 121 3 3 3
+0
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/context_nemo.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/context_nemo.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/context_nemo.xml (revision 9464)
@@ -0,0 +1,132 @@
+
+
+
+
+
+ 1800
+ 1026.0
+ 3991.86795711963
+ 0.99530670233846
+ 917.0
+ 330.0
+ 1.e20
+
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Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/domain_def_nemo.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/domain_def_nemo.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/domain_def_nemo.xml (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/domain_def_nemo.xml
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-lim.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-lim.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-lim.xml (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/field_def_nemo-lim.xml
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-opa.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-opa.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/field_def_nemo-opa.xml (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/field_def_nemo-opa.xml
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-lim.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-lim.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-lim.xml (revision 9464)
@@ -0,0 +1,133 @@
+
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+
+
+
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-opa.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-opa.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/file_def_nemo-opa.xml (revision 9464)
@@ -0,0 +1,108 @@
+
+
+
+
+
+
+
+
+
+ @toce_e3t / @e3t
+ @soce_e3t / @e3t
+
+
+
+ sqrt( @sst2 - @sst * @sst )
+ sqrt( @ssh2 - @ssh * @ssh )
+ @sstmax - @sstmin
+
+
+ @mldr10_1max - @mldr10_1min
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ @uoce_e3u / @e3u
+
+
+
+
+
+
+
+
+
+
+
+ @voce_e3v / @e3v
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
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+
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+
+
+
+
+
+
+
+
+
+
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/iodef.xml
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/iodef.xml (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/iodef.xml (revision 9464)
@@ -0,0 +1,28 @@
+
+
+
+
+
+
+
+
+
+
+
+ 10
+ false
+ false
+ oceanx
+
+
+
+
+
+
+
+
+
+
+
+
+
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_cfg (revision 9464)
@@ -0,0 +1,326 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! NEMO/OPA Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_ref
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!-----------------------------------------------------------------------
+&namrun ! parameters of the run
+!-----------------------------------------------------------------------
+ nn_no = 0 ! job number (no more used...)
+ cn_exp = "Nordic" ! experience name
+ nn_it000 = 1 ! first time step
+ nn_itend = 20 ! last time step (std 5475)
+/
+!-----------------------------------------------------------------------
+&namcfg ! parameters of the configuration
+!-----------------------------------------------------------------------
+ ln_read_cfg = .true. ! (=T) read the domain configuration file
+ ! ! (=F) user defined configuration ==>>> see usrdef(_...) modules
+ cn_domcfg = "ORCA_R2_zps_domcfg" ! domain configuration filename
+ ! ! (=F) user defined configuration ==>>> see usrdef(_...) modules
+ ln_closea = .false. ! T => keep closed seas (defined by closea_mask field) in the domain and apply
+ ! ! special treatment of freshwater fluxes.
+ ! ! F => suppress closed seas (defined by closea_mask field) from the bathymetry
+ ! ! at runtime.
+ ! ! If there is no closea_mask field in the domain_cfg file or we do not use
+ ! ! a domain_cfg file then this logical does nothing.
+/
+!-----------------------------------------------------------------------
+&namdom ! space and time domain (bathymetry, mesh, timestep)
+!-----------------------------------------------------------------------
+ ln_linssh = .false. ! =T linear free surface ==>> model level are fixed in time
+/
+!-----------------------------------------------------------------------
+&namcrs ! coarsened grid (for outputs and/or TOP) (ln_crs =T)
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namtsd ! data : Temperature & Salinity
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc ! Surface Boundary Condition (surface module)
+!-----------------------------------------------------------------------
+ nn_fsbc = 1 ! frequency of surface boundary condition computation
+ ln_blk = .true. ! Bulk formulation (T => fill namsbc_blk )
+/
+!-----------------------------------------------------------------------
+&namsbc_blk ! namsbc_blk Bulk formulae
+!-----------------------------------------------------------------------
+ ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
+/
+!-----------------------------------------------------------------------
+&namtra_qsr ! penetrative solar radiation
+!-----------------------------------------------------------------------
+ nn_chldta = 0 ! RGB : Chl data (=1) or cst value (=0)
+/
+!-----------------------------------------------------------------------
+&namsbc_cpl !
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc_rnf ! runoffs namelist surface boundary condition
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc_ssr ! surface boundary condition : sea surface restoring
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namsbc_alb ! albedo parameters
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namberg ! iceberg parameters
+!-----------------------------------------------------------------------
+ ln_icebergs = .false. ! iceberg floats or not
+ ln_bergdia = .true. ! Calculate budgets
+ nn_verbose_level = 1 ! Turn on more verbose output if level > 0
+ nn_verbose_write = 15 ! Timesteps between verbose messages
+ nn_sample_rate = 1 ! Timesteps between sampling for trajectory storage
+ ! Initial mass required for an iceberg of each class
+ rn_initial_mass = 8.8e7, 4.1e8, 3.3e9, 1.8e10, 3.8e10, 7.5e10, 1.2e11, 2.2e11, 3.9e11, 7.4e11
+ ! Proportion of calving mass to apportion to each class
+ rn_distribution = 0.24, 0.12, 0.15, 0.18, 0.12, 0.07, 0.03, 0.03, 0.03, 0.02
+ ! Ratio between effective and real iceberg mass (non-dim)
+ ! i.e. number of icebergs represented at a point
+ rn_mass_scaling = 2000, 200, 50, 20, 10, 5, 2, 1, 1, 1
+ ! thickness of newly calved bergs (m)
+ rn_initial_thickness = 40., 67., 133., 175., 250., 250., 250., 250., 250., 250.
+ rn_rho_bergs = 850. ! Density of icebergs
+ rn_LoW_ratio = 1.5 ! Initial ratio L/W for newly calved icebergs
+ ln_operator_splitting = .true. ! Use first order operator splitting for thermodynamics
+ rn_bits_erosion_fraction = 0. ! Fraction of erosion melt flux to divert to bergy bits
+ rn_sicn_shift = 0. ! Shift of sea-ice concn in erosion flux (0 fill namzdf_ric)
+ ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke)
+ ln_zdfgls = .false. ! Generic Length Scale closure (T => fill namzdf_gls)
+ ln_zdfosm = .false. ! OSMOSIS BL closure (T => fill namzdf_osm)
+ !
+ ! ! convection
+ ln_zdfevd = .true. ! Enhanced Vertical Diffusion scheme
+ nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1)
+ rn_evd = 100. ! evd mixing coefficient [m2/s]
+ !
+ ln_zdfddm = .true. ! double diffusive mixing
+ rn_avts = 1.e-4 ! maximum avs (vertical mixing on salinity)
+ rn_hsbfr = 1.6 ! heat/salt buoyancy flux ratio
+ !
+ ! ! gravity wave-driven vertical mixing
+ ln_zdfiwm = .false. ! internal wave-induced mixing (T => fill namzdf_iwm)
+ ln_zdfswm = .false. ! surface wave-induced mixing (T => ln_wave=ln_sdw=T )
+ !
+ ! ! Coefficients
+ rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if ln_zdfcst=F)
+ rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if ln_zdfcst=F)
+ nn_avb = 0 ! profile for background avt & avm (=1) or not (=0)
+ nn_havtb = 1 ! horizontal shape for avtb (=1) or not (=0)
+/
+!-----------------------------------------------------------------------
+&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namzdf_iwm ! tidal mixing parameterization (ln_zdfiwm =T)
+!-----------------------------------------------------------------------
+ nn_zpyc = 2 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2)
+ ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency
+ ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&nammpp ! Massively Parallel Processing ("key_mpp_mpi)
+!-----------------------------------------------------------------------
+ jpni = 4 ! jpni number of processors following i (set automatically if < 1)
+ jpnj = 4 ! jpnj number of processors following j (set automatically if < 1)
+ jpnij = 16 ! jpnij number of local domains (set automatically if < 1)
+/
+!-----------------------------------------------------------------------
+&namctl ! Control prints & Benchmark
+!-----------------------------------------------------------------------
+ ln_ctl = .false. ! trends control print (expensive!)
+/
+!-----------------------------------------------------------------------
+&namptr ! Poleward Transport Diagnostic
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&namhsb ! Heat and salt budgets (default F)
+!-----------------------------------------------------------------------
+ ln_diahsb = .true. ! check the heat and salt budgets (T) or not (F)
+/
+!-----------------------------------------------------------------------
+&namobs ! observation usage ('key_diaobs')
+!-----------------------------------------------------------------------
+/
+!-----------------------------------------------------------------------
+&nam_asminc ! assimilation increments ('key_asminc')
+!-----------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_cfg
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_cfg (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_cfg (revision 9464)
@@ -0,0 +1,86 @@
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!! ESIM configuration namelist: Overwrites SHARED/namelist_ice_lim3_ref
+!! 1 - Generic parameters (nampar)
+!! 2 - Ice thickness discretization (namitd)
+!! 3 - Ice dynamics (namdyn)
+!! 4 - Ice ridging/rafting (namdyn_rdgrft)
+!! 5 - Ice rheology (namdyn_rhg)
+!! 6 - Ice advection (namdyn_adv)
+!! 7 - Ice surface forcing (namforcing)
+!! 8 - Ice thermodynamics (namthd)
+!! 9 - Ice heat diffusion (namthd_zdf)
+!! 10 - Ice lateral melting (namthd_da)
+!! 11 - Ice growth in open water (namthd_do)
+!! 12 - Ice salinity (namthd_sal)
+!! 13 - Ice melt ponds (namthd_pnd)
+!! 14 - Ice initialization (namini)
+!! 15 - Ice/snow albedos (namalb)
+!! 16 - Ice diagnostics (namdia)
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!
+!------------------------------------------------------------------------------
+&nampar ! Generic parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namitd ! Ice discretization
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn ! Ice dynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rdgrft ! Ice ridging/rafting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_rhg ! Ice rheology
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdyn_adv ! Ice advection
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namforcing ! Ice surface forcing
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd ! Ice thermodynamics
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_zdf ! Ice heat diffusion
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_da ! Ice lateral melting
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_do ! Ice growth in open water
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_sal ! Ice salinity
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namthd_pnd ! Melt ponds
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namini ! Ice initialization
+!------------------------------------------------------------------------------
+ ln_iceini = .true. ! activate ice initialization (T) or not (F)
+ rn_thres_sst = 0.5 ! max delta temp. above Tfreeze with initial ice = (sst - tfreeze)
+/
+!------------------------------------------------------------------------------
+&namalb ! albedo parameters
+!------------------------------------------------------------------------------
+/
+!------------------------------------------------------------------------------
+&namdia ! Diagnostics
+!------------------------------------------------------------------------------
+/
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ice_ref (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/namelist_ice_lim3_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ref
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ref (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/EXP00/namelist_ref (revision 9464)
@@ -0,0 +1,1 @@
+link ../../SHARED/namelist_ref
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/cpp_AGRIF_NORDIC.fcm
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/cpp_AGRIF_NORDIC.fcm (revision 9464)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/AGRIF_NORDIC/cpp_AGRIF_NORDIC.fcm (revision 9464)
@@ -0,0 +1,1 @@
+bld::tool::fppkeys key_lim3 key_iomput key_mpp_mpi key_nosignedzero key_agrif
Index: /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/cfg.txt
===================================================================
--- /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/cfg.txt (revision 9463)
+++ /branches/2017/dev_merge_2017/NEMOGCM/CONFIG/cfg.txt (revision 9464)
@@ -11,2 +11,3 @@
ORCA2_LIM3 OPA_SRC LIM_SRC_3 NST_SRC
ORCA2_LIM3_PISCES OPA_SRC LIM_SRC_3 TOP_SRC NST_SRC
+AGRIF_NORDIC OPA_SRC LIM_SRC_3 NST_SRC