Changeset 951
- Timestamp:
- 2008-05-14T18:42:10+02:00 (16 years ago)
- Location:
- branches/dev_001_GM/NEMO/OFF_SRC/IOM
- Files:
-
- 6 edited
-
in_out_manager.F90 (modified) (4 diffs)
-
iom.F90 (modified) (30 diffs)
-
iom_def.F90 (modified) (4 diffs)
-
iom_ioipsl.F90 (modified) (18 diffs)
-
iom_nf90.F90 (modified) (18 diffs)
-
iom_rstdimg.F90 (modified) (21 diffs)
Legend:
- Unmodified
- Added
- Removed
-
branches/dev_001_GM/NEMO/OFF_SRC/IOM/in_out_manager.F90
r719 r951 33 33 INTEGER :: nleapy = 0 !: Leap year calendar flag (0/1 or 30) 34 34 INTEGER :: ninist = 0 !: initial state output flag (0/1) 35 LOGICAL :: ln_dimgnnn = .FALSE. !: type of dimgout. (F): 1 file for all proc 36 !: (T): 1 file per proc 35 37 !!---------------------------------------------------------------------- 36 38 !! was in restart but moved here because of the OFF line... better solution should be found... … … 72 74 !! Run control 73 75 !!---------------------------------------------------------------------- 74 76 75 77 INTEGER :: nstop = 0 !: error flag (=number of reason for a premature stop run) 76 78 INTEGER :: nwarn = 0 !: warning flag (=number of warning found during the run) 77 CHARACTER( LEN=100) :: ctmp1, ctmp2, ctmp3 !: temporary character79 CHARACTER(len=200) :: ctmp1, ctmp2, ctmp3 !: temporary character 78 80 CHARACTER (len=64) :: cform_err = "(/,' ===>>> : E R R O R', /,' ===========',/)" !: 79 81 CHARACTER (len=64) :: cform_war = "(/,' ===>>> : W A R N I N G', /,' ===============',/)" !: … … 82 84 !!---------------------------------------------------------------------- 83 85 !! OPA 9.0 , LOCEAN-IPSL (2005) 84 !! $Header $86 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/in_out_manager.F90,v 1.11 2007/03/02 16:37:06 opalod Exp $ 85 87 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 86 88 !!---------------------------------------------------------------------- … … 168 170 getunit = -1 169 171 ENDIF 170 172 171 173 END FUNCTION getunit 172 174 -
branches/dev_001_GM/NEMO/OFF_SRC/IOM/iom.F90
r719 r951 6 6 !! History : 9.0 ! 05 12 (J. Belier) Original code 7 7 !! 9.0 ! 06 02 (S. Masson) Adaptation to NEMO 8 !! " ! 07 07 (D. Storkey) Changes to iom_gettime 8 9 !!-------------------------------------------------------------------- 9 10 !!gm caution add !DIR nec: improved performance to be checked as well as no result changes … … 19 20 USE in_out_manager ! I/O manager 20 21 USE dom_oce ! ocean space and time domain 22 USE lbclnk ! lateal boundary condition / mpp exchanges 21 23 USE iom_def ! iom variables definitions 22 24 USE iom_ioipsl ! NetCDF format with IOIPSL library … … 28 30 29 31 PUBLIC iom_open, iom_close, iom_varid, iom_get, iom_gettime, iom_rstput 32 33 PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d 34 PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d 30 35 31 36 INTERFACE iom_get … … 38 43 !!---------------------------------------------------------------------- 39 44 !! OPA 9.0 , LOCEAN-IPSL (2006) 40 !! $Header $45 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/iom.F90,v 1.10 2007/06/29 14:10:50 opalod Exp $ 41 46 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 42 47 !!---------------------------------------------------------------------- … … 44 49 CONTAINS 45 50 46 SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, kiolib )51 SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, kiolib, ldstop ) 47 52 !!--------------------------------------------------------------------- 48 53 !! *** SUBROUTINE iom_open *** … … 55 60 INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap) 56 61 INTEGER , INTENT(in ), OPTIONAL :: kiolib ! library used to open the file (default = jpnf90) 62 LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.) 57 63 58 64 CHARACTER(LEN=100) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu] … … 62 68 CHARACTER(LEN=100) :: clinfo ! info character 63 69 LOGICAL :: llok ! check the existence 64 LOGICAL :: llwrt ! 70 LOGICAL :: llwrt ! local definition of ldwrt 71 LOGICAL :: llstop ! local definition of ldstop 65 72 INTEGER :: iolib ! library do we use to open the file 66 73 INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits) … … 89 96 ELSE ; llwrt = .FALSE. 90 97 ENDIF 98 ! do we call ctl_stop if we try to open a non-existing file in read mode? 99 IF( PRESENT(ldstop) ) THEN ; llstop = ldstop 100 ELSE ; llstop = .TRUE. 101 ENDIF 91 102 ! what library do we use to open the file? 92 103 IF( PRESENT(kiolib) ) THEN ; iolib = kiolib … … 110 121 iln = LEN_TRIM(clname) 111 122 ils = LEN_TRIM(clsuffix) 112 IF( iln <= ils ) clname = clname(1:iln)//TRIM(clsuffix)113 IF( clname(iln-ils+1:iln) /= TRIM(clsuffix) ) clname = clname(1:iln)//TRIM(clsuffix)123 IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) & 124 & clname = TRIM(clname)//TRIM(clsuffix) 114 125 cltmpn = clname ! store this name 115 126 ! try to find if the file to be opened already exist … … 118 129 IF( .NOT.llok ) THEN 119 130 ! we try to add the cpu number to the name 120 WRITE(clcpu,*) narea-1 131 IF( iolib == jprstdimg ) THEN ; WRITE(clcpu,*) narea 132 ELSE ; WRITE(clcpu,*) narea-1 133 ENDIF 121 134 clcpu = TRIM(ADJUSTL(clcpu)) 122 iln = INDEX(clname,TRIM(clsuffix) )135 iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.) 123 136 clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix) 124 137 icnt = 0 … … 132 145 END DO 133 146 ENDIF 134 ! check the domain definition 135 idom = jpdom_local_noovlap ! default definition 136 IF( PRESENT(kdom) ) idom = kdom 137 ! create the domain informations 138 ! ============= 139 SELECT CASE (idom) 140 CASE (jpdom_local_full) 141 idompar(:,1) = (/ jpi , jpj /) 142 idompar(:,2) = (/ nimpp , njmpp /) 143 idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /) 144 idompar(:,4) = (/ nldi - 1 , nldj - 1 /) 145 idompar(:,5) = (/ jpi - nlei , jpj - nlej /) 146 CASE (jpdom_local_noextra) 147 idompar(:,1) = (/ nlci , nlcj /) 148 idompar(:,2) = (/ nimpp , njmpp /) 149 idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /) 150 idompar(:,4) = (/ nldi - 1 , nldj - 1 /) 151 idompar(:,5) = (/ nlci - nlei , nlcj - nlej /) 152 CASE (jpdom_local_noovlap) 153 idompar(:,1) = (/ nlei - nldi + 1 , nlej - nldj + 1 /) 154 idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /) 155 idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /) 156 idompar(:,4) = (/ 0 , 0 /) 157 idompar(:,5) = (/ 0 , 0 /) 158 CASE DEFAULT 159 CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' ) 160 END SELECT 147 IF( llwrt ) THEN 148 ! check the domain definition 149 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 150 ! idom = jpdom_local_noovlap ! default definition 151 IF( jpni*jpnj == jpnij ) THEN ; idom = jpdom_local_noovlap ! default definition 152 ELSE ; idom = jpdom_local_full ! default definition 153 ENDIF 154 IF( PRESENT(kdom) ) idom = kdom 155 ! create the domain informations 156 ! ============= 157 SELECT CASE (idom) 158 CASE (jpdom_local_full) 159 idompar(:,1) = (/ jpi , jpj /) 160 idompar(:,2) = (/ nimpp , njmpp /) 161 idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /) 162 idompar(:,4) = (/ nldi - 1 , nldj - 1 /) 163 idompar(:,5) = (/ jpi - nlei , jpj - nlej /) 164 CASE (jpdom_local_noextra) 165 idompar(:,1) = (/ nlci , nlcj /) 166 idompar(:,2) = (/ nimpp , njmpp /) 167 idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /) 168 idompar(:,4) = (/ nldi - 1 , nldj - 1 /) 169 idompar(:,5) = (/ nlci - nlei , nlcj - nlej /) 170 CASE (jpdom_local_noovlap) 171 idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 172 idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /) 173 idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /) 174 idompar(:,4) = (/ 0 , 0 /) 175 idompar(:,5) = (/ 0 , 0 /) 176 CASE DEFAULT 177 CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' ) 178 END SELECT 179 ENDIF 161 180 ! Open the NetCDF or RSTDIMG file 162 181 ! ============= 163 182 ! do we have some free file identifier? 164 183 IF( MINVAL(iom_file(:)%nfid) /= 0 ) & 165 & CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' ) 184 & CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' ) 185 ! if no file was found... 186 IF( .NOT. llok ) THEN 187 IF( .NOT. llwrt ) THEN ! we are in read mode 188 IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' ) 189 ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file 190 ENDIF 191 ELSE ! we are in write mode so we 192 clname = cltmpn ! get back the file name without the cpu number 193 ENDIF 194 ENDIF 166 195 IF( istop == nstop ) THEN ! no error within this routine 167 IF( .NOT. llok ) clname = cltmpn ! get back the file name without the cpu number168 196 SELECT CASE (iolib) 169 197 CASE (jpioipsl ) ; CALL iom_ioipsl_open( clname, kiomid, llwrt, llok, idompar ) … … 212 240 END SELECT 213 241 iom_file(jf)%nfid = 0 ! free the id 214 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file( kiomid)%name)//' ok'242 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok' 215 243 ELSEIF( PRESENT(kiomid) ) THEN 216 244 WRITE(ctmp1,*) '--->', kiomid … … 223 251 224 252 225 FUNCTION iom_varid ( kiomid, cdvar, kdimsz )253 FUNCTION iom_varid ( kiomid, cdvar, kdimsz, ldstop ) 226 254 !!----------------------------------------------------------------------- 227 255 !! *** FUNCTION iom_varid *** … … 232 260 CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable 233 261 INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of the dimensions 262 LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.) 234 263 ! 235 264 INTEGER :: iom_varid, iiv, i_nvd 236 265 LOGICAL :: ll_fnd 237 266 CHARACTER(LEN=100) :: clinfo ! info character 267 LOGICAL :: llstop ! local definition of ldstop 238 268 !!----------------------------------------------------------------------- 239 clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)240 269 iom_varid = 0 ! default definition 241 ! 242 IF( kiomid > 0 ) THEN 270 ! do we call ctl_stop if we look for non-existing variable? 271 IF( PRESENT(ldstop) ) THEN ; llstop = ldstop 272 ELSE ; llstop = .TRUE. 273 ENDIF 274 ! 275 IF( kiomid > 0 ) THEN 276 clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar) 243 277 IF( iom_file(kiomid)%nfid == 0 ) THEN 244 278 CALL ctl_stop( trim(clinfo), 'the file is not open' ) … … 257 291 SELECT CASE (iom_file(kiomid)%iolib) 258 292 CASE (jpioipsl ) ; iom_varid = iom_ioipsl_varid( kiomid, cdvar, iiv, kdimsz ) 259 CASE (jpnf90 ) ; iom_varid = iom_nf90_varid (kiomid, cdvar, iiv, kdimsz )260 CASE (jprstdimg) ; iom_varid = 0! all variables are listed in iom_file293 CASE (jpnf90 ) ; iom_varid = iom_nf90_varid ( kiomid, cdvar, iiv, kdimsz ) 294 CASE (jprstdimg) ; iom_varid = -1 ! all variables are listed in iom_file 261 295 CASE DEFAULT 262 296 CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) … … 266 300 & 'increase the parameter jpmax_vars') 267 301 ENDIF 302 IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' ) 268 303 ELSE 269 304 iom_varid = iiv … … 294 329 INTEGER :: idvar ! variable id 295 330 ! 296 idvar = iom_varid( kiomid, cdvar ) 297 IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN 298 SELECT CASE (iom_file(kiomid)%iolib) 299 CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idvar, pvar ) 300 CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idvar, pvar ) 301 CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idvar, pvar ) 302 CASE DEFAULT 303 CALL ctl_stop( 'iom_g0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 304 END SELECT 305 END IF 331 IF( kiomid > 0 ) THEN 332 idvar = iom_varid( kiomid, cdvar ) 333 IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN 334 SELECT CASE (iom_file(kiomid)%iolib) 335 CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idvar, pvar ) 336 CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idvar, pvar ) 337 CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idvar, pvar ) 338 CASE DEFAULT 339 CALL ctl_stop( 'iom_g0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 340 END SELECT 341 ENDIF 342 ENDIF 306 343 END SUBROUTINE iom_g0d 307 344 … … 315 352 INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis 316 353 ! 317 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, & 318 & ktime=ktime, kstart=kstart, kcount=kcount ) 354 IF( kiomid > 0 ) THEN 355 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, & 356 & ktime=ktime, kstart=kstart, kcount=kcount ) 357 ENDIF 319 358 END SUBROUTINE iom_g1d 320 359 … … 328 367 INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis 329 368 ! 330 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, & 331 & ktime=ktime, kstart=kstart, kcount=kcount ) 369 IF( kiomid > 0 ) THEN 370 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, & 371 & ktime=ktime, kstart=kstart, kcount=kcount ) 372 ENDIF 332 373 END SUBROUTINE iom_g2d 333 374 … … 341 382 INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis 342 383 ! 343 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, & 344 & ktime=ktime, kstart=kstart, kcount=kcount ) 384 IF( kiomid > 0 ) THEN 385 IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, & 386 & ktime=ktime, kstart=kstart, kcount=kcount ) 387 ENDIF 345 388 END SUBROUTINE iom_g3d 346 389 !!---------------------------------------------------------------------- 347 390 348 391 SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , & 349 & 350 & 392 & pv_r1d, pv_r2d, pv_r3d, & 393 & ktime , kstart, kcount ) 351 394 !!----------------------------------------------------------------------- 352 395 !! *** ROUTINE iom_get_123d *** … … 373 416 INTEGER :: itime ! record number 374 417 INTEGER :: istop ! temporary value of nstop 418 INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes 419 INTEGER :: ji, jj ! loop counters 420 INTEGER :: irankpv ! 421 INTEGER :: ind1, ind2 ! substring index 375 422 INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis 376 423 INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis 377 424 INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable 425 INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable 378 426 REAL(wp) :: zscf, zofs ! sacle_factor and add_offset 379 427 INTEGER :: itmp ! temporary integer 380 428 CHARACTER(LEN=100) :: clinfo ! info character 429 CHARACTER(LEN=100) :: clname ! file name 430 CHARACTER(LEN=1) :: clrankpv, cldmspc ! 381 431 !--------------------------------------------------------------------- 382 432 ! 383 clinfo = ' iom_get_123d, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar) 433 clname = iom_file(kiomid)%name ! esier to read 434 clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar) 384 435 ! local definition of the domain ? 385 436 idom = kdom 386 437 ! check kcount and kstart optionals parameters... 387 IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) & 388 CALL ctl_stop( trim(clinfo), 'kcount present needs kstart present' ) 389 IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) & 390 CALL ctl_stop( trim(clinfo), 'kstart present needs kcount present' ) 391 IF( PRESENT(kstart) .AND. idom /= jpdom_unknown ) & 392 CALL ctl_stop( trim(clinfo), 'kstart present needs kdom = jpdom_unknown' ) 438 IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present') 439 IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present') 440 IF( PRESENT(kstart) .AND. idom /= jpdom_unknown ) CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown') 393 441 394 442 ! Search for the variable in the data base (eventually actualize data) … … 402 450 idmspc = inbdim ! number of spatial dimensions in the file 403 451 IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1 404 IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), & 405 & 'the file has more than 3 spatial dimensions this case is not coded...' ) 406 IF( idom == jpdom_local ) THEN ! Identify the domain in case of jpdom_local definition 407 IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN 408 idom = jpdom_local_full 409 ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN 410 idom = jpdom_local_noextra 411 ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN 412 idom = jpdom_local_noovlap 413 ELSE 414 CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' ) 415 ENDIF 416 ENDIF 452 IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...') 453 ! 454 ! update idom definition... 455 ! Identify the domain in case of jpdom_auto(glo/dta) definition 456 IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN 457 IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global 458 ELSE ; idom = jpdom_data 459 ENDIF 460 ind1 = INDEX( clname, '_', back = .TRUE. ) + 1 461 ind2 = INDEX( clname, '.', back = .TRUE. ) - 1 462 IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF 463 ENDIF 464 ! Identify the domain in case of jpdom_local definition 465 IF( idom == jpdom_local ) THEN 466 IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full 467 ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra 468 ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap 469 ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' ) 470 ENDIF 471 ENDIF 472 ! 473 ! check the consistency between input array and data rank in the file 474 ! 475 ! initializations 476 itime = 1 477 IF( PRESENT(ktime) ) itime = ktime 478 479 irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) ) 480 WRITE(clrankpv, fmt='(i1)') irankpv 481 WRITE(cldmspc , fmt='(i1)') idmspc 482 ! 483 IF( idmspc < irankpv ) THEN 484 CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', & 485 & 'it is impossible to read a '//clrankpv//'D array from this file...' ) 486 ELSEIF( idmspc == irankpv ) THEN 487 IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) & 488 & CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' ) 489 ELSEIF( idmspc > irankpv ) THEN 490 IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN 491 CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , & 492 & 'As the size of the z dimension is 1 and as we try to read the first record, ', & 493 & 'we accept this case, even if there is a possible mix-up between z and time dimension' ) 494 idmspc = idmspc - 1 495 ELSE 496 CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , & 497 & 'we do not accept data with more than '//cldmspc//' spatial dimension', & 498 & 'Use ncwa -a to suppress the unnecessary dimensions' ) 499 ENDIF 500 ENDIF 501 417 502 ! 418 503 ! definition of istart and icnt 419 504 ! 420 ! initializations505 icnt (:) = 1 421 506 istart(:) = 1 422 icnt (:) = 1 423 itime = 1 424 IF( PRESENT(ktime) ) itime = ktime 425 ! 426 IF( PRESENT(pv_r1d) ) THEN 427 IF( idmspc == 1 ) THEN 428 ! data is 1d array (+ maybe a temporal dimension) 429 IF( PRESENT(kstart) ) THEN 430 istart(1:2) = (/ kstart(1), itime /) 431 icnt(1) = kcount(1) 432 ELSE 433 IF( kdom == jpdom_unknown ) THEN 434 istart(2) = itime 435 icnt(1) = idimsz(1) 436 ELSE 437 CALL ctl_stop( trim(clinfo), 'case not coded...You must use jpdom_unknown' ) 507 istart(idmspc+1) = itime 508 509 IF( PRESENT(kstart) ) THEN ; istart(1:idmspc) = kstart(1:idmspc) ; icnt(1:idmspc) = kcount(1:idmspc) 510 ELSE 511 IF( idom == jpdom_unknown ) THEN ; icnt(1:idmspc) = idimsz(1:idmspc) 512 ELSE 513 IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array 514 IF( idom == jpdom_data ) THEN ; istart(1:2) = (/ mig(1), mjg(1) /) ! icnt(1:2) done bellow 515 ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done bellow 438 516 ENDIF 439 ENDIF 440 ELSE 441 CALL ctl_stop( trim(clinfo), 'to keep iom lisibility, when reading a 1D array,', & 442 & 'we do not accept data with more than 1 spatial dimension', & 443 & 'Use ncwa -a to suppress the unnecessary dimensions') 444 ENDIF 445 ELSEIF( PRESENT(pv_r2d) ) THEN 446 SELECT CASE (idmspc) 447 CASE (1) 448 CALL ctl_stop( trim(clinfo), 'the file has only 1 spatial dimension', & 449 & 'it is impossible to read a 2d array from this file...') 450 CASE (2) 451 ! data is 2d array (+ maybe a temporal dimension) 452 IF( PRESENT(kstart) ) THEN 453 istart(1:3) = (/ kstart(1:2), itime /) 454 icnt(1:2) = kcount(1:2) 455 ELSE 456 IF( kdom == jpdom_unknown ) THEN 457 istart(3) = itime 458 icnt(1:2) = idimsz(1:2) 459 ELSE 460 IF( idom == jpdom_data ) THEN 461 istart(1:3) = (/ mig(1), mjg(1), itime /) 462 ELSEIF( idom == jpdom_global ) THEN 463 istart(1:3) = (/ nimpp, njmpp, itime /) 464 ENDIF 465 ! we do not read the overlap -> we start to read at nldi, nldj 466 IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /) 467 ! we do not read the overlap and the extra-halos 468 ! -> from nldi to nlei and from nldj to nlej 469 icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 517 ! we do not read the overlap -> we start to read at nldi, nldj 518 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 519 ! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /) 520 IF( jpni*jpnj == jpnij .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /) 521 ! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej 522 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 523 ! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 524 IF( jpni*jpnj == jpnij ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 525 ELSE ; icnt(1:2) = (/ nlci , nlcj /) 470 526 ENDIF 471 ENDIF 472 CASE DEFAULT 473 IF( itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN 474 CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...', & 475 & 'As the size of the z dimension is 1 and as we try to read the first record, ', & 476 & 'we accept this case even if there is a possible mix-up between z and time dimension' ) 477 IF( PRESENT(kstart) ) THEN 478 istart(1:2) = kstart(1:2) 479 icnt(1:2) = kcount(1:2) 480 ELSE 481 IF( kdom == jpdom_unknown ) THEN 482 icnt(1:2) = idimsz(1:2) 483 ELSE 484 IF( idom == jpdom_data ) THEN 485 istart(1:2) = (/ mig(1), mjg(1) /) 486 ELSEIF( idom == jpdom_global ) THEN 487 istart(1:2) = (/ nimpp, njmpp /) 488 ENDIF 489 ! we do not read the overlap -> we start to read at nldi, nldj 490 IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /) 491 ! we do not read the overlap and the extra-halos 492 ! -> from nldi to nlei and from nldj to nlej 493 icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 494 ENDIF 495 ENDIF 496 ELSE 497 CALL ctl_stop( trim(clinfo), 'to keep iom lisibility, when reading a 2D array,', & 498 & 'we do not accept data with more than 2 spatial dimension', & 499 & 'Use ncwa -a to suppress the unnecessary dimensions' ) 500 ENDIF 501 END SELECT 502 ELSEIF( PRESENT(pv_r3d) ) THEN 503 SELECT CASE (idmspc) 504 CASE( 1 ) 505 CALL ctl_stop( trim(clinfo), 'the file has only 1 spatial dimension', & 506 & 'it is impossible to read a 3d array from this file...' ) 507 CASE( 2 ) 508 CALL ctl_stop( trim(clinfo), 'the file has only 2 spatial dimension', & 509 & 'it is impossible to read a 3d array from this file...' ) 510 CASE( 3 ) 511 ! data is 3d array (+ maybe a temporal dimension) 512 IF( PRESENT(kstart) ) THEN 513 istart(1:4) = (/ kstart(1:3), itime /) 514 icnt(1:3) = kcount(1:3) 515 ELSE 516 IF( kdom == jpdom_unknown ) THEN 517 istart(4) = itime 518 icnt(1:3) = idimsz(1:3) 519 ELSE 520 IF( idom == jpdom_data ) THEN 521 istart(1:4) = (/ mig(1), mjg(1), 1, itime /) 522 ELSEIF( idom == jpdom_global ) THEN 523 istart(1:4) = (/ nimpp, njmpp, 1, itime /) 524 ENDIF 525 ! we do not read the overlap -> we start to read at nldi, nldj 526 IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /) 527 ! we do not read the overlap and the extra-halos 528 ! -> from nldi to nlei and from nldj to nlej 529 icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /) 530 IF( idom == jpdom_data ) THEN 531 icnt(3) = jpkdta 532 ELSE 533 icnt(3) = jpk 527 IF( PRESENT(pv_r3d) ) THEN 528 IF( idom == jpdom_data ) THEN ; icnt(3) = jpkdta 529 ELSE ; icnt(3) = jpk 534 530 ENDIF 535 531 ENDIF 536 532 ENDIF 537 CASE DEFAULT 538 CALL ctl_stop( trim(clinfo), 'to keep iom lisibility, when reading a 3D array,', & 539 & 'we do not accept data with more than 3 spatial dimension', & 540 & 'Use ncwa -a to suppress the unnecessary dimensions' ) 541 END SELECT 533 ENDIF 542 534 ENDIF 543 535 … … 546 538 DO jl = 1, jpmax_dims 547 539 itmp = istart(jl)+icnt(jl)-1 548 IF( (itmp)> idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN549 WRITE( ctmp1,*) '(istart(',jl,') + icnt(',jl,') - 1) = ', itmp550 WRITE( ctmp2,*) ' is larger than idimsz(',jl,'): ', idimsz(jl)540 IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN 541 WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp 542 WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl) 551 543 CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 ) 552 544 ENDIF … … 555 547 ! check that icnt matches the input array 556 548 !- 557 IF( PRESENT(pv_r1d) ) THEN 558 itmp = size(pv_r1d) 559 WRITE(ctmp1,*) 'size(pv_r1d): ', itmp, ' /= icnt(1): ', icnt(1) 560 IF( itmp /= icnt(1) ) CALL ctl_stop( trim(clinfo), ctmp1 ) 561 ELSEIF( PRESENT(pv_r2d) ) THEN 562 DO jl = 1, 2 563 IF( idom == jpdom_unknown ) THEN 564 itmp = size(pv_r2d, jl) 565 WRITE(ctmp1,*) 'size(pv_r2d, ',jl,'): ',itmp,' /= icnt(',jl,'): ',icnt(jl) 566 ELSE 567 itmp = size(pv_r2d(nldi:nlei,nldj:nlej), jl) 568 WRITE(ctmp1,*) 'size(pv_r2d(nldi:nlei,nldj:nlej), ',jl,'): ',itmp,' /= icnt(',jl,'): ',icnt(jl) 549 IF( idom == jpdom_unknown ) THEN 550 IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d) 551 IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d) 552 IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d) 553 ctmp1 = 'd' 554 ELSE 555 IF( irankpv == 2 ) THEN 556 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 557 ! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)' 558 IF( jpni*jpnj == jpnij ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)' 559 ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)' 569 560 ENDIF 570 IF( itmp /= icnt(jl) ) CALL ctl_stop( trim(clinfo), ctmp1 ) 571 END DO 572 ELSEIF( PRESENT(pv_r3d) ) THEN 573 DO jl = 1, 3 574 IF( idom == jpdom_unknown ) THEN 575 itmp = size(pv_r3d, jl) 576 WRITE(ctmp1,*) 'size(pv_r3d, ',jl,'): ',itmp,' /= icnt(',jl,'):', icnt(jl) 577 ELSE 578 itmp = size(pv_r3d(nldi:nlei,nldj:nlej,:), jl) 579 WRITE(ctmp1,*) 'size(pv_r3d(nldi:nlei,nldj:nlej), ',jl,'): ',itmp,' /= icnt(',jl,'): ',icnt(jl) 561 ENDIF 562 IF( irankpv == 3 ) THEN 563 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 564 ! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)' 565 IF( jpni*jpnj == jpnij ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)' 566 ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)' 580 567 ENDIF 581 IF( itmp /= icnt(jl) ) CALL ctl_stop( trim(clinfo), ctmp1 ) 582 END DO 583 ENDIF 568 ENDIF 569 ENDIF 570 571 DO jl = 1, irankpv 572 WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl) 573 IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) ) 574 END DO 575 584 576 ENDIF 585 577 586 578 ! read the data 587 579 !- 588 IF( i stop == nstop) THEN! no additional errors until this point...580 IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point... 589 581 ! 582 ! find the right index of the array to be read 583 ! JMM + SM: ugly patch before getting the new version of lib_mpp) 584 ! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej 585 ! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2) 586 ! ENDIF 587 IF( jpni*jpnj == jpnij ) THEN 588 IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej 589 ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2) 590 ENDIF 591 ELSE 592 IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj 593 ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2) 594 ENDIF 595 ENDIF 596 590 597 SELECT CASE (iom_file(kiomid)%iolib) 591 CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idom, idvar, inbdim, istart, icnt, pv_r1d, pv_r2d, pv_r3d ) 592 CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idom, idvar, inbdim, istart, icnt, pv_r1d, pv_r2d, pv_r3d ) 593 CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idom, idvar, istart, icnt, pv_r1d, pv_r2d, pv_r3d ) 598 CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, & 599 & pv_r1d, pv_r2d, pv_r3d ) 600 CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, & 601 & pv_r1d, pv_r2d, pv_r3d ) 602 CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idom, idvar, ix1, ix2, iy1, iy2, & 603 & pv_r1d, pv_r2d, pv_r3d ) 594 604 CASE DEFAULT 595 605 CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 596 606 END SELECT 597 IF( istop == nstop .AND. lwp ) & 598 WRITE(numout,*) ' read '//trim(cdvar)//' in '//trim(iom_file(kiomid)%name)//' ok' 599 !--- Apply scale_factor and offset 600 zscf = iom_file(kiomid)%scf(idvar) ! scale factor 601 zofs = iom_file(kiomid)%ofs(idvar) ! offset 602 IF( PRESENT(pv_r1d) ) THEN 603 IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf 604 IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs 605 ELSEIF( PRESENT(pv_r2d) ) THEN 606 !CDIR COLLAPSE 607 IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf 608 !CDIR COLLAPSE 609 IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs 610 ELSEIF( PRESENT(pv_r3d) ) THEN 611 !CDIR COLLAPSE 612 IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf 613 !CDIR COLLAPSE 614 IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs 607 608 IF( istop == nstop ) THEN ! no additional errors until this point... 609 IF(lwp) WRITE(numout,*) ' read '//TRIM(cdvar)//' in '//TRIM(iom_file(kiomid)%name)//' ok' 610 611 !--- overlap areas and extra hallows (mpp) 612 IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN 613 CALL lbc_lnk( pv_r2d,'Z',-999.,'no0' ) 614 ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN 615 ! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension 616 IF( icnt(3) == jpk ) THEN 617 CALL lbc_lnk( pv_r3d,'Z',-999.,'no0' ) 618 ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...) 619 DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO 620 DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO 621 ENDIF 622 ENDIF 623 624 !--- Apply scale_factor and offset 625 zscf = iom_file(kiomid)%scf(idvar) ! scale factor 626 zofs = iom_file(kiomid)%ofs(idvar) ! offset 627 IF( PRESENT(pv_r1d) ) THEN 628 IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf 629 IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs 630 ELSEIF( PRESENT(pv_r2d) ) THEN 631 !CDIR COLLAPSE 632 IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf 633 !CDIR COLLAPSE 634 IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs 635 ELSEIF( PRESENT(pv_r3d) ) THEN 636 !CDIR COLLAPSE 637 IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf 638 !CDIR COLLAPSE 639 IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs 640 ENDIF 641 ! 615 642 ENDIF 616 643 ! … … 620 647 621 648 622 SUBROUTINE iom_gettime( kiomid, cdvar, ptime)649 SUBROUTINE iom_gettime( kiomid, ptime, cdvar, kntime, cdunits, cdcalendar ) 623 650 !!-------------------------------------------------------------------- 624 651 !! *** SUBROUTINE iom_gettime *** … … 626 653 !! ** Purpose : read the time axis cdvar in the file 627 654 !!-------------------------------------------------------------------- 628 INTEGER , INTENT(in ) :: kiomid ! file Identifier 629 CHARACTER(len=*) , INTENT(in ) :: cdvar ! time axis name 630 REAL(wp), DIMENSION(:), INTENT( out) :: ptime ! the time axis 631 ! 655 INTEGER , INTENT(in ) :: kiomid ! file Identifier 656 REAL(wp), DIMENSION(:) , INTENT( out) :: ptime ! the time axis 657 CHARACTER(len=*), OPTIONAL , INTENT(in ) :: cdvar ! time axis name 658 INTEGER , OPTIONAL , INTENT( out) :: kntime ! number of times in file 659 CHARACTER(len=*), OPTIONAL , INTENT( out) :: cdunits ! units attribute of time coordinate 660 CHARACTER(len=*), OPTIONAL , INTENT( out) :: cdcalendar ! calendar attribute of 661 ! 662 INTEGER, DIMENSION(1) :: kdimsz 632 663 INTEGER :: idvar ! id of the variable 664 CHARACTER(LEN=32) :: tname ! local name of time coordinate 633 665 CHARACTER(LEN=100) :: clinfo ! info character 634 666 !--------------------------------------------------------------------- 635 667 ! 636 clinfo = 'iom_gettime, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar) 637 idvar = iom_varid( kiomid, cdvar ) 638 ! 639 ptime(:) = 0. ! default definition 640 IF( idvar > 0 ) THEN 641 IF( iom_file(kiomid)%ndims(idvar) == 1 ) THEN 642 IF( iom_file(kiomid)%luld(idvar) ) THEN 643 IF( iom_file(kiomid)%dimsz(1,idvar) == size(ptime) ) THEN 644 SELECT CASE (iom_file(kiomid)%iolib) 645 CASE (jpioipsl ) ; CALL iom_ioipsl_gettime( kiomid, idvar, ptime ) 646 CASE (jpnf90 ) ; CALL iom_nf90_gettime( kiomid, idvar, ptime ) 647 CASE (jprstdimg) ; CALL ctl_stop( TRIM(clinfo)//' case IO library == jprstdimg not coded...' ) 648 CASE DEFAULT 649 CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 650 END SELECT 668 IF ( PRESENT(cdvar) ) THEN 669 tname = cdvar 670 ELSE 671 tname = iom_file(kiomid)%uldname 672 ENDIF 673 IF( kiomid > 0 ) THEN 674 clinfo = 'iom_gettime, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(tname) 675 IF ( PRESENT(kntime) ) THEN 676 idvar = iom_varid( kiomid, tname, kdimsz = kdimsz ) 677 kntime = kdimsz(1) 678 ELSE 679 idvar = iom_varid( kiomid, tname ) 680 ENDIF 681 ! 682 ptime(:) = 0. ! default definition 683 IF( idvar > 0 ) THEN 684 IF( iom_file(kiomid)%ndims(idvar) == 1 ) THEN 685 IF( iom_file(kiomid)%luld(idvar) ) THEN 686 IF( iom_file(kiomid)%dimsz(1,idvar) == size(ptime) ) THEN 687 SELECT CASE (iom_file(kiomid)%iolib) 688 CASE (jpioipsl ) ; CALL iom_ioipsl_gettime( kiomid, idvar, ptime, cdunits, cdcalendar ) 689 CASE (jpnf90 ) ; CALL iom_nf90_gettime( kiomid, idvar, ptime, cdunits, cdcalendar ) 690 CASE (jprstdimg) ; CALL ctl_stop( TRIM(clinfo)//' case IO library == jprstdimg not coded...' ) 691 CASE DEFAULT 692 CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 693 END SELECT 694 ELSE 695 WRITE(ctmp1,*) 'error with the size of ptime ',size(ptime),iom_file(kiomid)%dimsz(1,idvar) 696 CALL ctl_stop( trim(clinfo), trim(ctmp1) ) 697 ENDIF 651 698 ELSE 652 WRITE(ctmp1,*) 'error with the size of ptime ',size(ptime),iom_file(kiomid)%dimsz(1,idvar) 653 CALL ctl_stop( trim(clinfo), trim(ctmp1) ) 699 CALL ctl_stop( trim(clinfo), 'variable dimension is not unlimited... use iom_get' ) 654 700 ENDIF 655 701 ELSE 656 CALL ctl_stop( trim(clinfo), ' variable dimension is not unlimited... use iom_get' )702 CALL ctl_stop( trim(clinfo), 'the variable has more than 1 dimension' ) 657 703 ENDIF 658 704 ELSE 659 CALL ctl_stop( trim(clinfo), 'the variable has more than 1 dimension' ) 660 ENDIF 661 ELSE 662 CALL ctl_stop( trim(clinfo), 'variable not found in '//iom_file(kiomid)%name ) 705 CALL ctl_stop( trim(clinfo), 'variable not found in '//iom_file(kiomid)%name ) 706 ENDIF 663 707 ENDIF 664 708 ! … … 677 721 INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type 678 722 INTEGER :: ivid ! variable id 679 IF( iom_file(kiomid)%nfid > 0 ) THEN 680 ivid = iom_varid(kiomid, cdvar) 681 SELECT CASE (iom_file(kiomid)%iolib) 682 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar ) 683 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar ) 684 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, pvar ) 685 CASE DEFAULT 686 CALL ctl_stop( 'iom_rp0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 687 END SELECT 688 END IF 723 IF( kiomid > 0 ) THEN 724 IF( iom_file(kiomid)%nfid > 0 ) THEN 725 ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. ) 726 SELECT CASE (iom_file(kiomid)%iolib) 727 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar ) 728 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar ) 729 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pvar ) 730 CASE DEFAULT 731 CALL ctl_stop( 'iom_rp0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 732 END SELECT 733 ENDIF 734 ENDIF 689 735 END SUBROUTINE iom_rp0d 690 736 … … 697 743 INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type 698 744 INTEGER :: ivid ! variable id 699 IF( iom_file(kiomid)%nfid > 0 ) THEN 700 ivid = iom_varid(kiomid, cdvar) 701 SELECT CASE (iom_file(kiomid)%iolib) 702 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar ) 703 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar ) 704 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, pv_r1d = pvar ) 705 CASE DEFAULT 706 CALL ctl_stop( 'iom_rp1d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 707 END SELECT 708 END IF 745 IF( kiomid > 0 ) THEN 746 IF( iom_file(kiomid)%nfid > 0 ) THEN 747 ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. ) 748 SELECT CASE (iom_file(kiomid)%iolib) 749 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar ) 750 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar ) 751 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r1d = pvar ) 752 CASE DEFAULT 753 CALL ctl_stop( 'iom_rp1d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 754 END SELECT 755 ENDIF 756 ENDIF 709 757 END SUBROUTINE iom_rp1d 710 758 … … 717 765 INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type 718 766 INTEGER :: ivid ! variable id 719 IF( iom_file(kiomid)%nfid > 0 ) THEN 720 ivid = iom_varid(kiomid, cdvar) 721 SELECT CASE (iom_file(kiomid)%iolib) 722 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar ) 723 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar ) 724 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, pv_r2d = pvar ) 725 CASE DEFAULT 726 CALL ctl_stop( 'iom_rp2d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 727 END SELECT 728 END IF 767 IF( kiomid > 0 ) THEN 768 IF( iom_file(kiomid)%nfid > 0 ) THEN 769 ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. ) 770 SELECT CASE (iom_file(kiomid)%iolib) 771 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar ) 772 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar ) 773 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r2d = pvar ) 774 CASE DEFAULT 775 CALL ctl_stop( 'iom_rp2d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' ) 776 END SELECT 777 ENDIF 778 ENDIF 729 779 END SUBROUTINE iom_rp2d 730 780 … … 737 787 INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type 738 788 INTEGER :: ivid ! variable id 739 IF( iom_file(kiomid)%nfid > 0 ) THEN 740 ivid = iom_varid(kiomid, cdvar) 741 SELECT CASE (iom_file(kiomid)%iolib) 742 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar ) 743 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar ) 744 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, pv_r3d = pvar ) 745 CASE DEFAULT 746 CALL ctl_stop( 'iom_rp3d: accepted IO library are only jpioipsl and jprstdimg' ) 747 END SELECT 748 END IF 789 IF( kiomid > 0 ) THEN 790 IF( iom_file(kiomid)%nfid > 0 ) THEN 791 ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. ) 792 SELECT CASE (iom_file(kiomid)%iolib) 793 CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar ) 794 CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar ) 795 CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r3d = pvar ) 796 CASE DEFAULT 797 CALL ctl_stop( 'iom_rp3d: accepted IO library are only jpioipsl and jprstdimg' ) 798 END SELECT 799 ENDIF 800 ENDIF 749 801 END SUBROUTINE iom_rp3d 750 802 !!---------------------------------------------------------------------- -
branches/dev_001_GM/NEMO/OFF_SRC/IOM/iom_def.F90
r719 r951 5 5 !!==================================================================== 6 6 !! History : 9.0 ! 06 09 (S. Masson) Original code 7 !! " ! 07 07 (D. Storkey) Add uldname 7 8 !!-------------------------------------------------------------------- 8 9 !!--------------------------------------------------------------------------------- 9 10 !! OPA 9.0 , LOCEAN-IPSL (2006) 10 !! $Header $11 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/iom_def.F90,v 1.7 2007/06/05 10:33:38 opalod Exp $ 11 12 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 12 13 !!--------------------------------------------------------------------------------- … … 24 25 INTEGER, PARAMETER, PUBLIC :: jpdom_local_noovlap = 6 !: (nldi:nlei ,nldj:nlej ) 25 26 INTEGER, PARAMETER, PUBLIC :: jpdom_unknown = 7 !: No dimension checking 27 INTEGER, PARAMETER, PUBLIC :: jpdom_autoglo = 8 !: 28 INTEGER, PARAMETER, PUBLIC :: jpdom_autodta = 9 !: 26 29 27 30 INTEGER, PARAMETER, PUBLIC :: jpioipsl = 100 !: Use ioipsl (fliocom only) library … … 41 44 42 45 INTEGER, PARAMETER, PUBLIC :: jpmax_files = 20 !: maximum number of simultaneously opened file 43 INTEGER, PARAMETER, PUBLIC :: jpmax_vars = 60!: maximum number of variables in one file46 INTEGER, PARAMETER, PUBLIC :: jpmax_vars = 360 !: maximum number of variables in one file 44 47 INTEGER, PARAMETER, PUBLIC :: jpmax_dims = 4 !: maximum number of dimensions for one variable 45 48 INTEGER, PARAMETER, PUBLIC :: jpmax_digits = 5 !: maximum number of digits for the cpu number in the file name 46 49 50 !$AGRIF_DO_NOT_TREAT 47 51 INTEGER, PUBLIC :: iom_init = 0 !: used to initialize iom_file(:)%nfid to 0 48 !$AGRIF_DO_NOT_TREAT 52 49 53 TYPE, PUBLIC :: file_descriptor 50 54 CHARACTER(LEN=240) :: name !: name of the file … … 54 58 INTEGER :: iduld !: id of the unlimited dimension 55 59 INTEGER :: irec !: writing record position 56 CHARACTER(LEN=16), DIMENSION(jpmax_vars) :: cn_var !: names of the variables 60 CHARACTER(LEN=32) :: uldname !: name of the unlimited dimension 61 CHARACTER(LEN=32), DIMENSION(jpmax_vars) :: cn_var !: names of the variables 57 62 INTEGER, DIMENSION(jpmax_vars) :: nvid !: id of the variables 58 63 INTEGER, DIMENSION(jpmax_vars) :: ndims !: number of dimensions of the variables -
branches/dev_001_GM/NEMO/OFF_SRC/IOM/iom_ioipsl.F90
r719 r951 6 6 !! History : 9.0 ! 05 12 (J. Belier) Original code 7 7 !! 9.0 ! 06 02 (S. Masson) Adaptation to NEMO 8 !! " ! 07 07 (D. Storkey) Changes to iom_ioipsl_gettime 8 9 !!-------------------------------------------------------------------- 9 10 !!gm caution add !DIR nec: improved performance to be checked as well as no result changes … … 19 20 USE in_out_manager ! I/O manager 20 21 USE dom_oce ! ocean space and time domain 21 USE lbclnk ! lateal boundary condition / mpp exchanges22 22 USE iom_def ! iom variables definitions 23 23 USE ioipsl ! IOIPSL library … … 36 36 !!---------------------------------------------------------------------- 37 37 !! OPA 9.0 , LOCEAN-IPSL (2006) 38 !! $Header $38 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/iom_ioipsl.F90,v 1.8 2007/06/29 14:10:50 opalod Exp $ 39 39 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 40 40 !!---------------------------------------------------------------------- … … 48 48 !! ** Purpose : open an input file with IOIPSL (only fliocom module) 49 49 !!--------------------------------------------------------------------- 50 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name51 INTEGER , INTENT( out) :: kiomid ! ioipsl identifier of the opened file52 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file?53 LOGICAL , INTENT(in ) :: ldok ! check the existence54 INTEGER, DIMENSION(2,5), INTENT(in ) :: kdompar ! domain parameters:50 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name 51 INTEGER , INTENT( out) :: kiomid ! ioipsl identifier of the opened file 52 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file? 53 LOGICAL , INTENT(in ) :: ldok ! check the existence 54 INTEGER, DIMENSION(2,5), INTENT(in ), OPTIONAL :: kdompar ! domain parameters: 55 55 56 56 CHARACTER(LEN=100) :: clinfo ! info character … … 59 59 INTEGER :: ifliodom ! model domain identifier (see flio_dom_set) 60 60 INTEGER :: ioipslid ! ioipsl identifier of the opened file 61 INTEGER :: jl ! loop variable 61 62 !--------------------------------------------------------------------- 62 63 … … 92 93 ENDIF 93 94 ELSE ! the file should be open for read mode so it must exist... 94 CALL ctl_stop( TRIM(clinfo), ' File '//cdname(1:iln-1)//'* not found' )95 CALL ctl_stop( TRIM(clinfo), ' should be impossible case...' ) 95 96 ENDIF 96 97 ENDIF … … 98 99 ! ============= 99 100 IF( istop == nstop ) THEN ! no error within this routine 100 kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 101 !does not work with some compilers kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 102 kiomid = 0 103 DO jl = jpmax_files, 1, -1 104 IF( iom_file(jl)%nfid == 0 ) kiomid = jl 105 ENDDO 101 106 iom_file(kiomid)%name = TRIM(cdname) 102 107 iom_file(kiomid)%nfid = ioipslid … … 161 166 & len_dims = iom_file(kiomid)%dimsz(1:i_nvd,kiv), & ! dimensions size 162 167 & id_dims = idimid(1:i_nvd) ) ! dimensions ids 163 DO ji = 1, i_nvd ! find the unlimited dimension 168 iom_file(kiomid)%luld(kiv) = .FALSE. ! default value 169 DO ji = 1, i_nvd ! find the unlimited dimension 164 170 IF( idimid(ji) == iom_file(kiomid)%iduld ) iom_file(kiomid)%luld(kiv) = .TRUE. 165 171 END DO 166 !---------- Deal with scale_factor and offset172 !---------- Deal with scale_factor and add_offset 167 173 CALL flioinqa( ioipslid, cdvar, 'scale_factor', ll_fnd ) 168 174 IF( ll_fnd) THEN … … 171 177 iom_file(kiomid)%scf(kiv) = 1. 172 178 END IF 173 CALL flioinqa( ioipslid, cdvar, ' offset', ll_fnd )179 CALL flioinqa( ioipslid, cdvar, 'add_offset', ll_fnd ) 174 180 IF( ll_fnd ) THEN 175 CALL fliogeta( ioipslid, cdvar, ' offset', iom_file(kiomid)%ofs(kiv) )181 CALL fliogeta( ioipslid, cdvar, 'add_offset', iom_file(kiomid)%ofs(kiv) ) 176 182 ELSE 177 183 iom_file(kiomid)%ofs(kiv) = 0. … … 190 196 & 'increase the parameter jpmax_vars') 191 197 ENDIF 192 !!$ ELSE 193 !!$ CALL ctl_warn( trim(clinfo), 'Variable '//trim(cdvar)// & 194 !!$ & ' is not found in the file '//trim(iom_file(kiomid)%name) ) 198 ELSE 199 iom_ioipsl_varid = -1 ! variable not found, return error code: -1 195 200 ENDIF 196 201 ! … … 213 218 214 219 215 SUBROUTINE iom_ioipsl_g123d( kiomid, k dom, kvid, knbdim, kstart, kcount,&216 & 220 SUBROUTINE iom_ioipsl_g123d( kiomid, kvid, knbdim, kstart, kcount, kx1, kx2, ky1, ky2, & 221 & pv_r1d, pv_r2d, pv_r3d) 217 222 !!----------------------------------------------------------------------- 218 223 !! *** ROUTINE iom_ioipsl_g123d *** … … 223 228 !!----------------------------------------------------------------------- 224 229 INTEGER , INTENT(in ) :: kiomid ! iom identifier of the file 225 INTEGER , INTENT(in ) :: kdom ! Type of domain to be read226 230 INTEGER , INTENT(in ) :: kvid ! Name of the variable 227 231 INTEGER , INTENT(in ) :: knbdim ! number of dimensions of the variable 228 232 INTEGER , DIMENSION(:) , INTENT(in ) :: kstart ! start position of the reading in each axis 229 233 INTEGER , DIMENSION(:) , INTENT(in ) :: kcount ! number of points to be read in each axis 234 INTEGER , INTENT(in ) :: kx1, kx2, ky1, ky2 ! subdomain indexes 230 235 REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case) 231 236 REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case) … … 235 240 CHARACTER(LEN=100) :: clvn ! variable name 236 241 !--------------------------------------------------------------------- 237 clvn = TRIM(iom_file(kiomid)%cn_var(kvid)) 238 ioipslid = iom_file(kiomid)%nfid 242 clvn = TRIM(iom_file(kiomid)%cn_var(kvid)) ! get back variable name 243 ioipslid = iom_file(kiomid)%nfid ! get back IPIPSL file id 239 244 ! 240 245 IF( PRESENT(pv_r1d) ) THEN 241 CALL fliogetv( ioipslid, clvn, pv_r1d(: ), start=kstart(1:knbdim), count=kcount(1:knbdim) )246 CALL fliogetv( ioipslid, clvn, pv_r1d(: ), start = kstart(1:knbdim), count = kcount(1:knbdim) ) 242 247 ELSEIF( PRESENT(pv_r2d) ) THEN 243 IF( kdom /= jpdom_unknown ) THEN 244 CALL fliogetv( ioipslid, clvn, pv_r2d(nldi:nlei,nldj:nlej), start=kstart(1:knbdim), count=kcount(1:knbdim) ) 245 !--- Fill the overlap areas and extra hallows (mpp) 246 CALL lbc_lnk (pv_r2d,'Z',-999.,'no0') 247 ELSE 248 CALL fliogetv( ioipslid, clvn, pv_r2d(:,:), start=kstart(1:knbdim), count=kcount(1:knbdim) ) 249 ENDIF 248 CALL fliogetv( ioipslid, clvn, pv_r2d(kx1:kx2,ky1:ky2 ), start = kstart(1:knbdim), count = kcount(1:knbdim) ) 250 249 ELSEIF( PRESENT(pv_r3d) ) THEN 251 IF( kdom /= jpdom_unknown ) THEN 252 CALL fliogetv( ioipslid, clvn, pv_r3d(nldi:nlei,nldj:nlej,:), start=kstart(1:knbdim), & 253 & count=kcount (1:knbdim) ) 254 !--- Fill the overlap areas and extra hallows (mpp) 255 ! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension 256 IF( kcount(3) == jpk ) THEN 257 CALL lbc_lnk( pv_r3d,'Z',-999.,'no0' ) 258 ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...) 259 pv_r3d(nlei+1:jpi, : ,:) = 1. 260 pv_r3d( : ,nlej+1:jpj,:) = 1. 261 ENDIF 262 ELSE 263 CALL fliogetv( ioipslid, clvn, pv_r3d(:,:,:), start=kstart(1:knbdim), count=kcount(1:knbdim) ) 264 ENDIF 250 CALL fliogetv( ioipslid, clvn, pv_r3d(kx1:kx2,ky1:ky2,:), start = kstart(1:knbdim), count = kcount(1:knbdim) ) 265 251 ENDIF 266 252 ! … … 269 255 270 256 271 SUBROUTINE iom_ioipsl_gettime( kiomid, kvid, ptime )257 SUBROUTINE iom_ioipsl_gettime( kiomid, kvid, ptime, cdunits, cdcalendar ) 272 258 !!-------------------------------------------------------------------- 273 259 !! *** SUBROUTINE iom_gettime *** … … 275 261 !! ** Purpose : read the time axis kvid in the file with IOIPSL (only fliocom module) 276 262 !!-------------------------------------------------------------------- 277 INTEGER , INTENT(in ) :: kiomid ! file Identifier 278 INTEGER , INTENT(in ) :: kvid ! variable id 279 REAL(wp), DIMENSION(:), INTENT( out) :: ptime ! the time axis 263 INTEGER , INTENT(in ) :: kiomid ! file Identifier 264 INTEGER , INTENT(in ) :: kvid ! variable id 265 REAL(wp), DIMENSION(:) , INTENT( out) :: ptime ! the time axis 266 CHARACTER(len=*), OPTIONAL, INTENT( out) :: cdunits ! units attribute 267 CHARACTER(len=*), OPTIONAL, INTENT( out) :: cdcalendar ! calendar attribute 280 268 !--------------------------------------------------------------------- 281 269 ! 282 270 CALL fliogetv( iom_file(kiomid)%nfid, TRIM(iom_file(kiomid)%cn_var(kvid)), ptime(:), & 283 271 & start=(/ 1 /), count=(/ iom_file(kiomid)%dimsz(1, kvid) /) ) 272 IF ( PRESENT(cdunits) ) THEN 273 CALL fliogeta( iom_file(kiomid)%nfid, TRIM(iom_file(kiomid)%cn_var(kvid)), "units", cdunits ) 274 ENDIF 275 IF ( PRESENT(cdcalendar) ) THEN 276 CALL fliogeta( iom_file(kiomid)%nfid, TRIM(iom_file(kiomid)%cn_var(kvid)), "calendar", cdcalendar ) 277 ENDIF 284 278 ! 285 279 END SUBROUTINE iom_ioipsl_gettime … … 330 324 & long_name="Time axis", units='seconds since 0001-01-01 00:00:00' ) 331 325 ! update informations structure related the dimension variable we just added... 332 iom_file(kiomid)%nvars = 4 333 iom_file(kiomid)%luld(1:4) = (/ .FALSE., .FALSE., .FALSE., .TRUE. /) 334 iom_file(kiomid)%cn_var(1:3) = (/ 'nav_lon', 'nav_lat', 'nav_lev' /) 335 iom_file(kiomid)%cn_var(4) = 'time_counter' 336 iom_file(kiomid)%ndims(1:4) = (/ 2, 2, 1, 1 /) 337 CALL flioinqf( ioipslid, ln_dim = idimsz ) 338 iom_file(kiomid)%dimsz(1:2, 1) = idimsz(1:2) 339 iom_file(kiomid)%dimsz(1:2, 2) = idimsz(1:2) 340 iom_file(kiomid)%dimsz(1, 3:4) = (/idimsz(3), 1/) 326 iom_file(kiomid)%nvars = 4 327 iom_file(kiomid)%luld(1:4) = (/ .FALSE., .FALSE., .FALSE., .TRUE. /) 328 iom_file(kiomid)%cn_var(1:3) = (/ 'nav_lon', 'nav_lat', 'nav_lev' /) 329 iom_file(kiomid)%cn_var(4) = 'time_counter' 330 iom_file(kiomid)%ndims(1:4) = (/ 2, 2, 1, 1 /) 331 ! trick: defined to 0 to say that dimension variables are defined but not yet written 332 iom_file(kiomid)%dimsz(1, 1) = 0 341 333 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' define dimension variables done' 342 334 ENDIF … … 403 395 ! write dimension variables if it is not already done 404 396 ! ============= 397 ! trick: is defined to 0 => dimension variable are defined but not yet written 405 398 IF( iom_file(kiomid)%dimsz(1, 1) == 0 ) THEN 406 399 CALL flioputv( ioipslid, 'nav_lon' , glamt(ix1:ix2, iy1:iy2) ) … … 408 401 CALL flioputv( ioipslid, 'nav_lev' , gdept_0 ) 409 402 ! +++ WRONG VALUE: to be improved but not really useful... 410 CALL flioputv( ioipslid, 'time_counter', kt ) 403 CALL flioputv( ioipslid, 'time_counter', kt ) 404 ! update the values of the variables dimensions size 405 CALL flioinqf( ioipslid, ln_dim = idimsz ) 406 iom_file(kiomid)%dimsz(1:2, 1) = idimsz(1:2) 407 iom_file(kiomid)%dimsz(1:2, 2) = idimsz(1:2) 408 iom_file(kiomid)%dimsz(1, 3:4) = (/idimsz(3), 1/) 411 409 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' write dimension variables done' 412 410 ENDIF -
branches/dev_001_GM/NEMO/OFF_SRC/IOM/iom_nf90.F90
r719 r951 6 6 !! History : 9.0 ! 05 12 (J. Belier) Original code 7 7 !! 9.0 ! 06 02 (S. Masson) Adaptation to NEMO 8 !! " ! 07 07 (D. Storkey) Changes to iom_nf90_gettime 8 9 !!-------------------------------------------------------------------- 9 10 !!gm caution add !DIR nec: improved performance to be checked as well as no result changes … … 36 37 !!---------------------------------------------------------------------- 37 38 !! OPA 9.0 , LOCEAN-IPSL (2006) 38 !! $Header $39 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/iom_nf90.F90,v 1.8 2007/06/29 14:10:50 opalod Exp $ 39 40 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 40 41 !!---------------------------------------------------------------------- … … 48 49 !! ** Purpose : open an input file with NF90 49 50 !!--------------------------------------------------------------------- 50 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name51 INTEGER , INTENT( out) :: kiomid ! nf90 identifier of the opened file52 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file?53 LOGICAL , INTENT(in ) :: ldok ! check the existence54 INTEGER, DIMENSION(2,5), INTENT(in ) :: kdompar ! domain parameters:51 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name 52 INTEGER , INTENT( out) :: kiomid ! nf90 identifier of the opened file 53 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file? 54 LOGICAL , INTENT(in ) :: ldok ! check the existence 55 INTEGER, DIMENSION(2,5), INTENT(in ), OPTIONAL :: kdompar ! domain parameters: 55 56 56 57 CHARACTER(LEN=100) :: clinfo ! info character … … 60 61 INTEGER :: if90id ! nf90 identifier of the opened file 61 62 INTEGER :: idmy ! dummy variable 63 INTEGER :: jl ! loop variable 62 64 !--------------------------------------------------------------------- 63 65 … … 103 105 CALL iom_nf90_check(NF90_PUT_ATT( if90id, NF90_GLOBAL, 'DOMAIN_type' , 'BOX' ), clinfo) 104 106 ELSE ! the file should be open for read mode so it must exist... 105 CALL ctl_stop( TRIM(clinfo), ' File '//cdname(1:iln-1)//'* not found' )107 CALL ctl_stop( TRIM(clinfo), ' should be impossible case...' ) 106 108 ENDIF 107 109 ENDIF … … 109 111 ! ============= 110 112 IF( istop == nstop ) THEN ! no error within this routine 111 kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 113 !does not work with some compilers kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 114 kiomid = 0 115 DO jl = jpmax_files, 1, -1 116 IF( iom_file(jl)%nfid == 0 ) kiomid = jl 117 ENDDO 112 118 iom_file(kiomid)%name = TRIM(cdname) 113 119 iom_file(kiomid)%nfid = if90id … … 116 122 iom_file(kiomid)%irec = -1 ! useless for NetCDF files, used to know if the file is in define mode 117 123 CALL iom_nf90_check(NF90_Inquire(if90id, unlimitedDimId = iom_file(kiomid)%iduld), clinfo) 124 IF ( iom_file(kiomid)%iduld .GE. 0 ) THEN 125 CALL iom_nf90_check(NF90_Inquire_Dimension(if90id, iom_file(kiomid)%iduld, & 126 & name = iom_file(kiomid)%uldname), clinfo) 127 ENDIF 118 128 IF(lwp) WRITE(numout,*) ' ---> '//TRIM(cdname)//' OK' 119 129 ELSE … … 174 184 iom_file(kiomid)%ndims(kiv) = i_nvd 175 185 CALL iom_nf90_check(NF90_Inquire_Variable(if90id, ivarid, dimids = idimid(1:i_nvd)), clinfo) ! dimensions ids 176 DO ji = 1, i_nvd ! dimensions size 186 iom_file(kiomid)%luld(kiv) = .FALSE. ! default value 187 DO ji = 1, i_nvd ! dimensions size 177 188 CALL iom_nf90_check(NF90_Inquire_Dimension(if90id, idimid(ji), len = iom_file(kiomid)%dimsz(ji,kiv)), clinfo) 178 189 IF( idimid(ji) == iom_file(kiomid)%iduld ) iom_file(kiomid)%luld(kiv) = .TRUE. ! unlimited dimension? 179 190 END DO 180 !---------- Deal with scale_factor and offset191 !---------- Deal with scale_factor and add_offset 181 192 llok = NF90_Inquire_attribute(if90id, ivarid, 'scale_factor') == nf90_noerr 182 193 IF( llok) THEN … … 185 196 iom_file(kiomid)%scf(kiv) = 1. 186 197 END IF 187 llok = NF90_Inquire_attribute(if90id, ivarid, ' offset') == nf90_noerr198 llok = NF90_Inquire_attribute(if90id, ivarid, 'add_offset') == nf90_noerr 188 199 IF( llok ) THEN 189 CALL iom_nf90_check(NF90_GET_ATT(if90id, ivarid, ' offset', iom_file(kiomid)%ofs(kiv)), clinfo)200 CALL iom_nf90_check(NF90_GET_ATT(if90id, ivarid, 'add_offset', iom_file(kiomid)%ofs(kiv)), clinfo) 190 201 ELSE 191 202 iom_file(kiomid)%ofs(kiv) = 0. … … 200 211 ENDIF 201 212 ENDIF 202 !!$ ELSE 203 !!$ CALL ctl_warn( trim(clinfo), 'Variable '//trim(cdvar)// & 204 !!$ & ' is not found in the file '//trim(iom_file(kiomid)%name) ) 213 ELSE 214 iom_nf90_varid = -1 ! variable not found, return error code: -1 205 215 ENDIF 206 216 ! … … 226 236 227 237 228 SUBROUTINE iom_nf90_g123d( kiomid, k dom, kvid, knbdim, kstart, kcount,&229 & pv_r1d, pv_r2d, pv_r3d)238 SUBROUTINE iom_nf90_g123d( kiomid, kvid, knbdim, kstart, kcount, kx1, kx2, ky1, ky2, & 239 & pv_r1d, pv_r2d, pv_r3d ) 230 240 !!----------------------------------------------------------------------- 231 241 !! *** ROUTINE iom_nf90_g123d *** … … 236 246 !!----------------------------------------------------------------------- 237 247 INTEGER , INTENT(in ) :: kiomid ! iom identifier of the file 238 INTEGER , INTENT(in ) :: kdom ! Type of domain to be read239 248 INTEGER , INTENT(in ) :: kvid ! Name of the variable 240 249 INTEGER , INTENT(in ) :: knbdim ! number of dimensions of the variable 241 250 INTEGER , DIMENSION(:) , INTENT(in ) :: kstart ! start position of the reading in each axis 242 251 INTEGER , DIMENSION(:) , INTENT(in ) :: kcount ! number of points to be read in each axis 252 INTEGER , INTENT(in ) :: kx1, kx2, ky1, ky2 ! subdomain indexes 243 253 REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case) 244 254 REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case) 245 255 REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case) 246 256 ! 247 CHARACTER(LEN=100) :: clinfo ! info character248 INTEGER :: if90id ! nf90 identifier of the opened file249 INTEGER :: ivid ! nf90 variable id257 CHARACTER(LEN=100) :: clinfo ! info character 258 INTEGER :: if90id ! nf90 identifier of the opened file 259 INTEGER :: ivid ! nf90 variable id 250 260 !--------------------------------------------------------------------- 251 261 clinfo = 'iom_nf90_g123d , file: '//TRIM(iom_file(kiomid)%name)//', var: '//TRIM(iom_file(kiomid)%cn_var(kvid)) 252 262 if90id = iom_file(kiomid)%nfid ! get back NetCDF file id 253 263 ivid = iom_file(kiomid)%nvid(kvid) ! get back NetCDF var id 254 IF( PRESENT(pv_r1d) ) THEN 255 CALL iom_nf90_check(NF90_GET_VAR(if90id, ivid, pv_r1d(:), start=kstart(1:knbdim), count=kcount(1:knbdim)), clinfo ) 264 ! 265 IF( PRESENT(pv_r1d) ) THEN 266 CALL iom_nf90_check( NF90_GET_VAR(if90id, ivid, pv_r1d(: ), start = kstart(1:knbdim), & 267 & count = kcount(1:knbdim)), clinfo ) 256 268 ELSEIF( PRESENT(pv_r2d) ) THEN 257 IF( kdom /= jpdom_unknown ) THEN 258 CALL iom_nf90_check(NF90_GET_VAR(if90id, ivid, pv_r2d(nldi:nlei,nldj:nlej), & 259 & start=kstart(1:knbdim), count=kcount(1:knbdim)), clinfo) 260 !--- Fill the overlap areas and extra hallows (mpp) 261 CALL lbc_lnk (pv_r2d,'Z',-999.,'no0') 262 ELSE 263 CALL iom_nf90_check(NF90_GET_VAR(if90id, ivid, pv_r2d(:,:), start=kstart(1:knbdim), count=kcount(1:knbdim)), clinfo) 264 ENDIF 269 CALL iom_nf90_check( NF90_GET_VAR(if90id, ivid, pv_r2d(kx1:kx2,ky1:ky2 ), start = kstart(1:knbdim), & 270 & count = kcount(1:knbdim)), clinfo ) 265 271 ELSEIF( PRESENT(pv_r3d) ) THEN 266 IF( kdom /= jpdom_unknown ) THEN 267 CALL iom_nf90_check(NF90_GET_VAR(if90id, ivid, pv_r3d(nldi:nlei,nldj:nlej,:), & 268 & start=kstart(1:knbdim), count=kcount (1:knbdim)), clinfo) 269 !--- Fill the overlap areas and extra hallows (mpp) 270 ! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension 271 IF( kcount(3) == jpk ) THEN 272 CALL lbc_lnk( pv_r3d,'Z',-999.,'no0' ) 273 ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...) 274 pv_r3d(nlei+1:jpi, : ,:) = 1. 275 pv_r3d( : ,nlej+1:jpj,:) = 1. 276 ENDIF 277 ELSE 278 CALL iom_nf90_check(NF90_GET_VAR(if90id, ivid, pv_r3d(:,:,:), & 279 & start=kstart(1:knbdim), count=kcount (1:knbdim)), clinfo) 280 ENDIF 272 CALL iom_nf90_check( NF90_GET_VAR(if90id, ivid, pv_r3d(kx1:kx2,ky1:ky2,:), start = kstart(1:knbdim), & 273 & count = kcount(1:knbdim)), clinfo ) 281 274 ENDIF 282 275 ! … … 284 277 285 278 286 SUBROUTINE iom_nf90_gettime( kiomid, kvid, ptime )279 SUBROUTINE iom_nf90_gettime( kiomid, kvid, ptime, cdunits, cdcalendar ) 287 280 !!-------------------------------------------------------------------- 288 281 !! *** SUBROUTINE iom_gettime *** … … 290 283 !! ** Purpose : read the time axis kvid in the file with NF90 291 284 !!-------------------------------------------------------------------- 292 INTEGER , INTENT(in ) :: kiomid ! file Identifier 293 INTEGER , INTENT(in ) :: kvid ! variable id 294 REAL(wp), DIMENSION(:), INTENT( out) :: ptime ! the time axis 285 INTEGER , INTENT(in ) :: kiomid ! file Identifier 286 INTEGER , INTENT(in ) :: kvid ! variable id 287 REAL(wp), DIMENSION(:) , INTENT( out) :: ptime ! the time axis 288 CHARACTER(len=*), OPTIONAL, INTENT( out) :: cdunits ! units attribute 289 CHARACTER(len=*), OPTIONAL, INTENT( out) :: cdcalendar ! calendar attribute 295 290 ! 296 291 CHARACTER(LEN=100) :: clinfo ! info character … … 299 294 CALL iom_nf90_check(NF90_GET_VAR(iom_file(kiomid)%nfid, iom_file(kiomid)%nvid(kvid), ptime(:), & 300 295 & start=(/ 1 /), count=(/ iom_file(kiomid)%dimsz(1, kvid) /)), clinfo) 296 IF ( PRESENT(cdunits) ) THEN 297 CALL iom_nf90_check(NF90_GET_ATT(iom_file(kiomid)%nfid, iom_file(kiomid)%nvid(kvid), "units", & 298 & values=cdunits), clinfo) 299 ENDIF 300 IF ( PRESENT(cdcalendar) ) THEN 301 CALL iom_nf90_check(NF90_GET_ATT(iom_file(kiomid)%nfid, iom_file(kiomid)%nvid(kvid), "calendar", & 302 & values=cdcalendar), clinfo) 303 ENDIF 301 304 ! 302 305 END SUBROUTINE iom_nf90_gettime … … 355 358 iom_file(kiomid)%cn_var(1:4) = cltmp 356 359 iom_file(kiomid)%ndims(1:4) = (/ 2, 2, 1, 1 /) 357 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 1, len = iom_file(kiomid)%dimsz(1,1) ), clinfo) 358 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 2, len = iom_file(kiomid)%dimsz(2,1) ), clinfo) 359 iom_file(kiomid)%dimsz(1:2, 2) = iom_file(kiomid)%dimsz(1:2, 1) 360 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 3, len = iom_file(kiomid)%dimsz(1,3) ), clinfo) 361 iom_file(kiomid)%dimsz(1 , 4) = 1 ! unlimited dimension 360 ! trick: defined to 0 to say that dimension variables are defined but not yet written 361 iom_file(kiomid)%dimsz(1, 1) = 0 362 362 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' define dimension variables done' 363 363 ENDIF … … 433 433 ! write dimension variables if it is not already done 434 434 ! ============= 435 ! trick: is defined to 0 => dimension variable are defined but not yet written 435 436 IF( iom_file(kiomid)%dimsz(1, 1) == 0 ) THEN 436 437 CALL iom_nf90_check(NF90_INQ_VARID( if90id, 'nav_lon' , idmy ), clinfo) … … 443 444 CALL iom_nf90_check(NF90_INQ_VARID( if90id, 'time_counter', idmy ), clinfo) 444 445 CALL iom_nf90_check(NF90_PUT_VAR( if90id, idmy, kt ), clinfo) 446 ! update the values of the variables dimensions size 447 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 1, len = iom_file(kiomid)%dimsz(1,1) ), clinfo) 448 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 2, len = iom_file(kiomid)%dimsz(2,1) ), clinfo) 449 iom_file(kiomid)%dimsz(1:2, 2) = iom_file(kiomid)%dimsz(1:2, 1) 450 CALL iom_nf90_check(NF90_INQUIRE_DIMENSION( if90id, 3, len = iom_file(kiomid)%dimsz(1,3) ), clinfo) 451 iom_file(kiomid)%dimsz(1 , 4) = 1 ! unlimited dimension 445 452 IF(lwp) WRITE(numout,*) TRIM(clinfo)//' write dimension variables done' 446 453 ENDIF -
branches/dev_001_GM/NEMO/OFF_SRC/IOM/iom_rstdimg.F90
r719 r951 31 31 MODULE PROCEDURE iom_rstdimg_rp0d, iom_rstdimg_rp123d 32 32 END INTERFACE 33 34 INTEGER, PARAMETER :: jpvnl = 32 ! variable name length 35 33 36 !!---------------------------------------------------------------------- 34 37 !! OPA 9.0 , LOCEAN-IPSL (2006) 35 !! $Header $38 !! $Header: /home/opalod/NEMOCVSROOT/NEMO/OPA_SRC/IOM/iom_rstdimg.F90,v 1.9 2007/06/29 14:10:50 opalod Exp $ 36 39 !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) 37 40 !!---------------------------------------------------------------------- … … 45 48 !! ** Purpose : open an input file read only (return 0 if not found) 46 49 !!--------------------------------------------------------------------- 47 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name48 INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file49 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file?50 LOGICAL , INTENT(in ) :: ldok ! check the existence51 INTEGER, DIMENSION(2,5), INTENT(in ) :: kdompar ! domain parameters:50 CHARACTER(len=*) , INTENT(inout) :: cdname ! File name 51 INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file 52 LOGICAL , INTENT(in ) :: ldwrt ! read or write the file? 53 LOGICAL , INTENT(in ) :: ldok ! check the existence 54 INTEGER, DIMENSION(2,5), INTENT(in ), OPTIONAL :: kdompar ! domain parameters: 52 55 53 56 CHARACTER(LEN=100) :: clinfo ! info character … … 59 62 INTEGER :: irecl8 ! record length 60 63 INTEGER :: ios ! IO status 64 INTEGER :: irhd ! record of the header infos 61 65 INTEGER :: ivnum ! number of variables 62 66 INTEGER :: ishft ! counter shift … … 64 68 INTEGER :: in0d, in1d, in2d, in3d ! number of 0/1/2/3D variables 65 69 INTEGER :: ipni, ipnj, ipnij, iarea ! domain decomposition 66 CHARACTER(LEN=8), DIMENSION(jpmax_vars) :: clna0d, clna1d, clna2d, clna3d ! name of 0/1/2/3D variables 70 INTEGER :: iiglo, ijglo ! domain global size 71 INTEGER :: jl ! loop variable 72 CHARACTER(LEN=jpvnl), DIMENSION(jpmax_vars) :: clna0d, clna1d, clna2d, clna3d ! name of 0/1/2/3D variables 67 73 REAL(wp), DIMENSION(jpmax_vars) :: zval0d, zval1d, zval2d, zval3d ! value of 0d variables or record 68 74 ! ! position for 1/2/3D variables 69 75 !--------------------------------------------------------------------- 70 71 76 clinfo = ' iom_rstdimg_open ~~~ ' 72 77 istop = nstop ! store the actual value of nstop … … 99 104 iln = INDEX( cdname, '.dimg' ) 100 105 IF( ldwrt ) THEN ! the file should be open in readwrite mode so we create it... 101 irecl8= kdompar(1,1) * kdompar(2,1) * wp106 irecl8= MAX( kdompar(1,1) * kdompar(2,1) * wp, ( 8*jpnij + 15 ) * 4 ) 102 107 IF( jpnij > 1 ) THEN 103 WRITE(cltmp,'(a,a,i4.4,a)') cdname(1:iln-1), '_', narea -1, '.dimg'108 WRITE(cltmp,'(a,a,i4.4,a)') cdname(1:iln-1), '_', narea, '.dimg' 104 109 cdname = TRIM(cltmp) 105 110 ENDIF … … 108 113 & , RECL = irecl8, STATUS = 'new', ACTION = 'readwrite', IOSTAT = ios, ERR = 987 ) 109 114 ELSE ! the file should be open for read mode so it must exist... 110 CALL ctl_stop( TRIM(clinfo), ' File '//cdname(1:iln-1)//'* not found' )115 CALL ctl_stop( TRIM(clinfo), ' should be impossible case...' ) 111 116 ENDIF 112 117 ENDIF … … 114 119 ! ============= 115 120 IF( ldok ) THEN ! old file 116 READ( idrst, REC = 1, IOSTAT = ios, ERR = 987 ) irecl8, inx, iny, inz, in0d, in1d, in2d, in3d 117 READ( idrst, REC = 1, IOSTAT = ios, ERR = 987 ) irecl8, inx, iny, inz, in0d, in1d, in2d, in3d, & 121 READ( idrst, REC = 1 , IOSTAT = ios, ERR = 987 ) & 122 & irecl8, inx, iny, inz, in0d, in1d, in2d, in3d, irhd, & 123 & ipni, ipnj, ipnij, iarea, iiglo, ijglo 124 READ( idrst, REC = irhd, IOSTAT = ios, ERR = 987 ) & 118 125 & clna0d(1:in0d), zval0d(1:in0d), clna1d(1:in1d), zval1d(1:in1d), & 119 & clna2d(1:in2d), zval2d(1:in2d), clna3d(1:in3d), zval3d(1:in3d), & 120 & ipni, ipnj, ipnij, iarea 126 & clna2d(1:in2d), zval2d(1:in2d), clna3d(1:in3d), zval3d(1:in3d) 121 127 clinfo = TRIM(clinfo)//' file '//TRIM(cdname) 122 IF( inx /= kdompar(1,1) ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in domain size in i direction' ) 123 IF( iny /= kdompar(2,1) ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in domain size in j direction' ) 128 IF( iiglo /= jpiglo ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in global domain size in i direction' ) 129 IF( ijglo /= jpjglo ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in global domain size in j direction' ) 130 IF( ldwrt ) THEN 131 IF( inx /= kdompar(1,1) ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in local domain size in i direction' ) 132 IF( iny /= kdompar(2,1) ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in local domain size in j direction' ) 133 ENDIF 124 134 IF( inz /= jpk ) CALL ctl_stop( TRIM(clinfo), 'Mismatch in domain size in k direction' ) 125 135 IF( ipni /= jpni ) CALL ctl_stop( TRIM(clinfo), 'Processor splitting changed along I' ) … … 131 141 ! ============= 132 142 IF( istop == nstop ) THEN ! no error within this routine 133 kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 143 !does not work with some compilers kiomid = MINLOC(iom_file(:)%nfid, dim = 1) 144 kiomid = 0 145 DO jl = jpmax_files, 1, -1 146 IF( iom_file(jl)%nfid == 0 ) kiomid = jl 147 ENDDO 134 148 iom_file(kiomid)%name = TRIM(cdname) 135 149 iom_file(kiomid)%nfid = idrst … … 209 223 INTEGER :: irecl8 ! record length 210 224 INTEGER :: ios ! IO status 225 INTEGER :: irhd ! record of the header infos 211 226 INTEGER :: ivnum ! number of variables 212 227 INTEGER :: idrst ! file logical unit 213 228 INTEGER :: inx, iny, inz ! x,y,z dimension of the variable 214 229 INTEGER :: in0d, in1d, in2d, in3d ! number of 0/1/2/3D variables 215 CHARACTER(LEN= 8), DIMENSION(jpmax_vars) :: clna0d, clna1d, clna2d, clna3d! name of 0/1/2/3D variables216 REAL(wp), DIMENSION(jpmax_vars) :: zval0d, zval1d, zval2d, zval3d! value of 0d variables or record230 CHARACTER(LEN=jpvnl), DIMENSION(jpmax_vars) :: clna0d, clna1d, clna2d, clna3d ! name of 0/1/2/3D variables 231 REAL(wp), DIMENSION(jpmax_vars) :: zval0d, zval1d, zval2d, zval3d ! value of 0d variables or record 217 232 ! ! position for 1/2/3D variables 218 233 !--------------------------------------------------------------------- … … 226 241 IF( ios == 0 ) THEN 227 242 READ( idrst, REC = 1, IOSTAT = ios, ERR = 987 ) irecl8, inx, iny, inz ! get back domain size 243 irhd = iom_file(kiomid)%irec 228 244 ivnum = iom_file(kiomid)%nvars 229 245 in0d = 0 ; in1d = 0 ; in2d = 0 ; in3d = 0 … … 249 265 END SELECT 250 266 END DO 251 ! force to have at least 1 va lriable in each list (not necessary (?), but safer)267 ! force to have at least 1 variable in each list (not necessary (?), but safer...) 252 268 IF( in0d == 0 ) THEN ; in0d = 1 ; clna0d(1) = 'no0d' ; zval0d(1) = -1. ; ENDIF 253 269 IF( in1d == 0 ) THEN ; in1d = 1 ; clna1d(1) = 'no1d' ; zval1d(1) = -1. ; ENDIF … … 255 271 IF( in3d == 0 ) THEN ; in3d = 1 ; clna3d(1) = 'no3d' ; zval3d(1) = -1. ; ENDIF 256 272 ! update the file header before closing it 257 WRITE( idrst, REC = 1, IOSTAT = ios, ERR = 987 ) irecl8, inx, iny, inz, in0d, in1d, in2d, in3d, & 258 & clna0d(1:in0d), zval0d(1:in0d), clna1d(1:in1d), zval1d(1:in1d), & 259 & clna2d(1:in2d), zval2d(1:in2d), clna3d(1:in3d), zval3d(1:in3d), & 260 & jpni, jpnj, jpnij, narea, jpiglo, jpjglo, nlcit, nlcjt, nldit, nldjt, nleit, nlejt, nimppt, njmppt 273 WRITE( idrst, REC = 1, IOSTAT = ios, ERR = 987 ) & 274 & irecl8, inx, iny, inz, in0d, in1d, in2d, in3d, irhd, & 275 & jpni, jpnj, jpnij, narea, jpiglo, jpjglo, & 276 & nlcit, nlcjt, nldit, nldjt, nleit, nlejt, nimppt, njmppt 277 IF( (ivnum * (jpvnl + wp)) > irecl8 ) THEN 278 CALL ctl_stop( TRIM(clinfo), & 279 & 'Last record size is too big... You could reduce the value of jpvnl' ) 280 ELSE 281 WRITE( idrst, REC = irhd, IOSTAT = ios, ERR = 987 ) & 282 & clna0d(1:in0d), zval0d(1:in0d), clna1d(1:in1d), zval1d(1:in1d), & 283 & clna2d(1:in2d), zval2d(1:in2d), clna3d(1:in3d), zval3d(1:in3d) 284 ENDIF 261 285 ELSE 262 286 ios = 0 ! we cannot write in the file … … 290 314 291 315 292 SUBROUTINE iom_rstdimg_rp0d( kiomid, cdvar, pv_r0d )316 SUBROUTINE iom_rstdimg_rp0d( kiomid, cdvar, kvid, pv_r0d ) 293 317 !!-------------------------------------------------------------------- 294 318 !! *** SUBROUTINE iom_rstdimg_rstput *** … … 298 322 INTEGER , INTENT(in) :: kiomid ! Identifier of the file 299 323 CHARACTER(len=*) , INTENT(in) :: cdvar ! time axis name 324 INTEGER , INTENT(in) :: kvid ! variable id 300 325 REAL(wp) , INTENT(in) :: pv_r0d ! written 0d field 301 326 ! … … 305 330 ! 306 331 clinfo = ' iom_rstdimg_rp0d ~~~ ' 307 idvar = iom_file(kiomid)%nvars + 1 332 IF( kvid <= 0 ) THEN ! new variable 333 idvar = iom_file(kiomid)%nvars + 1 334 ELSE ! the variable already exists in the file 335 idvar = kvid 336 ENDIF 308 337 IF( idvar <= jpmax_vars ) THEN 309 338 iom_file(kiomid)%nvars = idvar … … 320 349 321 350 322 SUBROUTINE iom_rstdimg_g123d( kiomid, kdom , kvid , kstart, kcount,&323 & 351 SUBROUTINE iom_rstdimg_g123d( kiomid, kdom , kvid, kx1, kx2, ky1, ky2, & 352 & pv_r1d, pv_r2d, pv_r3d ) 324 353 !!----------------------------------------------------------------------- 325 354 !! *** ROUTINE iom_rstdimg_g123d *** … … 332 361 INTEGER , INTENT(in ) :: kdom ! Type of domain to be read 333 362 INTEGER , INTENT(in ) :: kvid ! variable id 334 INTEGER , DIMENSION(:) , INTENT(in ) :: kstart ! start position of the reading in each axis 335 INTEGER , DIMENSION(:) , INTENT(in ) :: kcount ! number of points to be read in each axis 363 INTEGER , INTENT(inout) :: kx1, kx2, ky1, ky2 ! subdomain indexes 336 364 REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case) 337 365 REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case) … … 342 370 INTEGER :: jk ! loop counter 343 371 INTEGER :: idrst ! logical unit of the restart file 344 INTEGER :: istop ! temporary storage of nstop345 INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes346 372 !--------------------------------------------------------------------- 347 373 clinfo = ' iom_rstdimg_g123d ~~~ ' 348 374 ! 349 istop = nstop ! store the actual value of nstop 350 idrst = iom_file(kiomid)%nfid ! get back the logical unit of the restart file 351 IF( kdom == jpdom_data .OR. kdom == jpdom_global ) & 352 & CALL ctl_stop( TRIM(clinfo), TRIM(iom_file(kiomid)%cn_var(kvid))//': case not coded for rstdimg files' ) 353 ! 354 IF( istop == nstop .AND. kvid > 0 ) THEN 355 IF( .NOT. PRESENT(pv_r1d) ) THEN 356 SELECT CASE (kdom) ! find the right index of the array to be read 357 CASE (jpdom_local_full) ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej 358 CASE (jpdom_local_noextra) ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj 359 CASE (jpdom_local_noovlap) ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej 360 CASE DEFAULT ; CALL ctl_stop( clinfo, 'we should not be there...' ) 361 END SELECT 362 ENDIF 375 IF( kdom == jpdom_data .OR. kdom == jpdom_global ) THEN 376 CALL ctl_stop( TRIM(clinfo), TRIM(iom_file(kiomid)%cn_var(kvid))//': case not coded for rstdimg files' ) 377 ELSE 378 ! 379 idrst = iom_file(kiomid)%nfid ! get back the logical unit of the restart file 380 ! modify the subdomain indexes because we cannot directly extract the appropriate subdomaine 381 IF( kdom == jpdom_local_full ) THEN ; kx1 = 1 ; kx2 = jpi ; ky1 = 1 382 ELSEIF( kdom == jpdom_local_noextra ) THEN ; kx1 = 1 ; kx2 = nlci ; ky1 = 1 383 ENDIF 384 ! 363 385 IF( PRESENT(pv_r1d) ) THEN ! read 1D variables 364 READ( idrst, REC = iom_file(kiomid)%nvid(kvid), IOSTAT = ios, ERR = 987 ) pv_r1d(:)386 READ( idrst, REC = iom_file(kiomid)%nvid(kvid) , IOSTAT = ios, ERR = 987 ) pv_r1d(:) 365 387 ELSEIF( PRESENT(pv_r2d) ) THEN ! read 2D variables 366 READ( idrst, REC = iom_file(kiomid)%nvid(kvid), IOSTAT = ios, ERR = 987 ) pv_r2d(ix1:ix2, iy1:iy2 ) 367 SELECT CASE (kdom) 368 CASE (jpdom_local_noextra) !--- Fill extra hallows (mpp) 369 pv_r2d(nlci+1:jpi, : ) = 1. 370 pv_r2d( : ,nlcj+1:jpj) = 1. 371 CASE (jpdom_local_noovlap) !--- Fill the overlap areas and extra hallows (mpp) 372 CALL lbc_lnk (pv_r2d,'Z',-999.,'no0') 373 CASE DEFAULT 374 END SELECT 388 READ( idrst, REC = iom_file(kiomid)%nvid(kvid) , IOSTAT = ios, ERR = 987 ) pv_r2d(kx1:kx2, ky1:ky2 ) 375 389 ELSEIF( PRESENT(pv_r3d) ) THEN ! read 3D variables 376 390 DO jk = 1, iom_file(kiomid)%dimsz(3,kvid) ! do loop on each level 377 READ( idrst, REC = iom_file(kiomid)%nvid(kvid) + jk - 1, IOSTAT = ios, ERR = 987 ) & 378 & pv_r3d( ix1:ix2, iy1:iy2, jk ) 379 END DO 380 SELECT CASE (kdom) 381 CASE (jpdom_local_noextra) !--- Fill extra hallows (mpp) 382 pv_r3d(nlci+1:jpi, : ,:) = 1. 383 pv_r3d( : ,nlcj+1:jpj,:) = 1. 384 CASE (jpdom_local_noovlap) !--- Fill the overlap areas and extra hallows (mpp) 385 ! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension 386 IF( kcount(3) == jpk ) THEN 387 CALL lbc_lnk( pv_r3d,'Z',-999.,'no0' ) 388 ELSE 389 pv_r3d(nlei+1:jpi, : ,:) = 1. 390 pv_r3d( : ,nlej+1:jpj,:) = 1. 391 ENDIF 392 CASE DEFAULT 393 END SELECT 394 ENDIF 395 ENDIF 396 987 CONTINUE 397 IF( ios /= 0 ) THEN 398 WRITE(ctmp1,*) ' iostat = ', ios 399 CALL ctl_stop( TRIM(clinfo), ' IO error with file '//TRIM(iom_file(kiomid)%name), ctmp1 ) 391 READ( idrst, REC = iom_file(kiomid)%nvid(kvid) + jk - 1, IOSTAT = ios, ERR = 987 ) pv_r3d(kx1:kx2, ky1:ky2, jk) 392 END DO 393 ENDIF 394 987 CONTINUE 395 IF( ios /= 0 ) THEN 396 WRITE(ctmp1,*) ' iostat = ', ios 397 CALL ctl_stop( TRIM(clinfo), ' IO error with file '//TRIM(iom_file(kiomid)%name), ctmp1 ) 398 ENDIF 400 399 ENDIF 401 400 ! … … 403 402 404 403 405 SUBROUTINE iom_rstdimg_rp123d( kiomid, cdvar, pv_r1d, pv_r2d, pv_r3d )404 SUBROUTINE iom_rstdimg_rp123d( kiomid, cdvar, kvid, pv_r1d, pv_r2d, pv_r3d ) 406 405 !!-------------------------------------------------------------------- 407 406 !! *** SUBROUTINE iom_rstdimg_rstput *** … … 411 410 INTEGER , INTENT(in) :: kiomid ! Identifier of the file 412 411 CHARACTER(len=*) , INTENT(in) :: cdvar ! time axis name 412 INTEGER , INTENT(in) :: kvid ! variable id 413 413 REAL(wp), DIMENSION( jpk), INTENT(in), OPTIONAL :: pv_r1d ! written 1d field 414 414 REAL(wp), DIMENSION(jpi,jpj ), INTENT(in), OPTIONAL :: pv_r2d ! written 2d field … … 431 431 irec = iom_file(kiomid)%irec ! get back the record number of the variable 432 432 idrst = iom_file(kiomid)%nfid ! get back the logical unit of the restart file 433 idvar = iom_file(kiomid)%nvars + 1 433 IF( kvid <= 0 ) THEN ! new variable 434 idvar = iom_file(kiomid)%nvars + 1 435 ELSE ! the variable already exists in the file 436 idvar = kvid 437 ENDIF 434 438 IF( idvar > jpmax_vars ) CALL ctl_stop( TRIM(clinfo), 'increase the value of jpmax_vars' ) 435 439 IF( .NOT. PRESENT(pv_r1d) ) THEN
Note: See TracChangeset
for help on using the changeset viewer.
