Index: NEMO/trunk/tools/NESTING/agulhas
===================================================================
--- NEMO/trunk/tools/NESTING/agulhas	(revision 9596)
+++ 	(revision )
@@ -1,101 +1,0 @@
-&input_output
-    iom_activated = true 
-/
-
-&coarse_grid_files    
-    parent_coordinate_file = 'coordinates.nc'
-    parent_meshmask_file   = 'meshmask.nc'  
-/    
-    
-&bathymetry    
-    new_topo = true
-    elevation_database = 'bathymetry_meter_ORCA_R05.nc'
-    elevation_name = 'topo'
-    smoothing = true
-    smoothing_factor = 0.6
-    nb_connection_pts = 3    
-    removeclosedseas = true
-    type_bathy_interp = 0 
-    rn_hmin = -3 
-/   
-
-&nesting    
-    imin = 125
-    imax = 170
-    jmin = 36
-    jmax = 63
-    rho  = 4									
-    rhot = 2
-    bathy_update = true
-    updated_parent_file = 'bathy_updated.nc'				
-/
-
-&vertical_grid    
-    ln_e3_dep = .true.
-    ppkth = 21.4333619793800
-    ppacr = 3
-    ppdzmin = 0
-    pphmax  = 0
-    psur = -4762.96143546300
-    pa0  = 255.58049070440
-    pa1  = 245.58132232490
-    N  = 31
-    ldbletanh   = .FALSE.
-    pa2         = 0.0
-    ppkth2      = 0.0
-    ppacr2      = 0.0
-/    
-    
-&partial_cells    	
-    partial_steps = true
-    parent_bathy_meter = 'bathy_meter.nc'
-    parent_batmet_name = 'Bathymetry'
-    e3zps_min = 20.
-    e3zps_rat = 0.1
-/
-
-&nemo_coarse_grid    
-    jpizoom = 1			
-    jpjzoom = 1			
-/
-&forcing_files		   
-    U_FILES = 'taux_1m.nc'
-!'dyna_grid_U.nc'                              ! needed for Offline
-    V_FILES =  'tauy_1m.nc'
-!'dyna_grid_V.nc'                              ! needed for Offline
-    FLX_FILES = 
-    'data_1m_salinity_nomask.nc',
-    'data_1m_potential_temperature_nomask.nc',
-    'flx.nc',
-    'geothermal_heating.nc'
-!    'river.orca.nc ',                         ! needed for Pisces
-!    'ndeposition.orca.nc',                    ! needed for Pisces 
-!    'dust.orca.nc',                           ! needed for Pisces 
-!    'bathy.orca.nc'                           ! needed for Pisces
-!'dyna_grid_T.nc',                             ! needed for Offline
-!'dyna_grid_W.nc'                              ! needed for Offline 
-/
-
-&interp
-    VAR_INTERP =
-    'votemper/bicubic',
-    'vosaline/bicubic'
-!    'dust/bilinear',
-!    'riverdic/bilinear',
-!    'riverpoc/bilinear',
-!    'riverdoc/bilinear',
-!    'nedep/bilinear',
-!    'bathy/bilinear'
-/
-
-&restart
-    restart_file = 'restart.nc'   
-    shlat = 0
-    dimg = false
-    dimg_output_file = 'test_dimg'
-    adatrj = 360.25 
-    interp_type = 'bilinear'
-/ 
-&restart_trc
-    restart_trc_file = 'restart_trc.nc'   
-/ 
Index: NEMO/trunk/tools/NESTING/nordic1
===================================================================
--- NEMO/trunk/tools/NESTING/nordic1	(revision 9601)
+++ NEMO/trunk/tools/NESTING/nordic1	(revision 9601)
@@ -0,0 +1,103 @@
+&input_output
+    iom_activated = true 
+/
+
+&coarse_grid_files    
+    parent_coordinate_file = 'coordinates.nc'
+    parent_meshmask_file   = 'meshmask.nc'  
+/    
+    
+&bathymetry    
+    new_topo = true
+    elevation_database = 'GEBCO_2014_2D.nc'
+    elevation_name = 'elevation'
+    smoothing = true
+    smoothing_factor = 0.6
+    nb_connection_pts = 2    
+    removeclosedseas = true
+    type_bathy_interp = 2 
+    rn_hmin = -3 
+/   
+
+&nesting    
+    imin = 124
+    imax = 155
+    jmin = 109
+    jmax = 145
+    rho  = 4
+    rhot = 4
+    bathy_update = true
+    updated_parent_file = 'bathy_updated.nc'				
+/
+
+&vertical_grid    
+    ln_e3_dep = .true.
+    ppkth = 21.4333619793800
+    ppacr = 3
+    ppdzmin = 0
+    pphmax  = 0
+    psur = -4762.96143546300
+    pa0  = 255.58049070440
+    pa1  = 245.58132232490
+    N  = 31
+    ldbletanh   = .FALSE.
+    pa2         = 0
+    ppkth2      = 0
+    ppacr2      = 0
+/    
+    
+&partial_cells    	
+    partial_steps = true
+    parent_bathy_meter = 'bathy_meter.nc'
+    parent_batmet_name = 'Bathymetry'
+    e3zps_min = 20.
+    e3zps_rat = 0.1
+/
+
+&nemo_coarse_grid    
+    jpizoom = 1			
+    jpjzoom = 1			
+/
+&forcing_files		   
+    FLX_FILES = 
+    'data_1m_salinity_nomask.nc',
+    'data_1m_potential_temperature_nomask.nc',
+    'geothermal_heating.nc'
+    'mixing_power_bot.nc',
+    'mixing_power_pyc.nc',
+    'mixing_power_cri.nc',
+    'chlorophyll.nc'
+!    'river.orca.nc ',                         ! needed for Pisces
+!    'ndeposition.orca.nc',                    ! needed for Pisces 
+!    'dust.orca.nc',                           ! needed for Pisces 
+!    'bathy.orca.nc'                           ! needed for Pisces
+/
+
+&interp
+    VAR_INTERP =
+    'votemper/bilinear',
+    'vosaline/bilinear',
+    'heatflow/bilinear'
+    'field/bilinear',
+    'field/bilinear',
+    'field/bilinear',
+    'CHLA/bilinear'
+!    'dust/bilinear',
+!    'riverdic/bilinear',
+!    'riverpoc/bilinear',
+!    'riverdoc/bilinear',
+!    'nedep/bilinear',
+!    'bathy/bilinear'
+/
+
+&restart
+    restart_file = 'restart.nc'   
+    shlat = 0
+    dimg = false
+    dimg_output_file = 'test_dimg'
+    adatrj = 360.25 
+    interp_type = 'bilinear'
+/ 
+&restart_trc
+    restart_trc_file = 'restart_trc.nc'   
+/ 
Index: NEMO/trunk/tools/NESTING/nordic2
===================================================================
--- NEMO/trunk/tools/NESTING/nordic2	(revision 9601)
+++ NEMO/trunk/tools/NESTING/nordic2	(revision 9601)
@@ -0,0 +1,103 @@
+&input_output
+    iom_activated = true
+/
+
+&coarse_grid_files    
+    parent_coordinate_file = '1_coordinates.nc'
+    parent_meshmask_file   = '1_meshmask.nc'
+/    
+    
+&bathymetry    
+    new_topo = true
+    elevation_database = 'GEBCO_2014_2D.nc'
+    elevation_name = 'elevation'
+    smoothing = true
+    smoothing_factor = 0.6
+    nb_connection_pts = 2 
+    removeclosedseas = true
+    type_bathy_interp = 2
+    rn_hmin = -3
+/   
+
+&nesting    
+    imin = 40
+    imax = 80
+    jmin = 86
+    jmax = 121
+    rho  = 3
+    rhot = 3
+    bathy_update = true
+    updated_parent_file = '1_bathy_updated.nc'
+/
+
+&vertical_grid    
+    ln_e3_dep = .true.
+    ppkth = 21.4333619793800
+    ppacr = 3
+    ppdzmin = 0
+    pphmax  = 0
+    psur = -4762.96143546300
+    pa0  = 255.58049070440
+    pa1  = 245.58132232490
+    N  = 31
+    ldbletanh   = .FALSE.
+    pa2         = 0
+    ppkth2      = 0
+    ppacr2      = 0
+/    
+    
+&partial_cells    	
+    partial_steps = true
+    parent_bathy_meter = '1_bathy_meter.nc'
+    parent_batmet_name = 'Bathymetry'
+    e3zps_min = 20.
+    e3zps_rat = 0.1
+/
+
+&nemo_coarse_grid
+    jpizoom = 1
+    jpjzoom = 1
+/
+&forcing_files		   
+    FLX_FILES = 
+    '1_data_1m_salinity_nomask.nc',
+    '1_data_1m_potential_temperature_nomask.nc',
+    '1_geothermal_heating.nc'
+    '1_mixing_power_bot.nc',
+    '1_mixing_power_pyc.nc',
+    '1_mixing_power_cri.nc',
+    '1_chlorophyll.nc'
+!    'river.orca.nc ',                         ! needed for Pisces
+!    'ndeposition.orca.nc',                    ! needed for Pisces 
+!    'dust.orca.nc',                           ! needed for Pisces 
+!    'bathy.orca.nc'                           ! needed for Pisces
+/
+
+&interp
+    VAR_INTERP =
+    'votemper/bilinear',
+    'vosaline/bilinear',
+    'heatflow/bilinear'
+    'field/bilinear',
+    'field/bilinear',
+    'field/bilinear',
+    'CHLA/bilinear'
+!    'dust/bilinear',
+!    'riverdic/bilinear',
+!    'riverpoc/bilinear',
+!    'riverdoc/bilinear',
+!    'nedep/bilinear',
+!    'bathy/bilinear'
+/
+
+&restart
+    restart_file = 'restart.nc'   
+    shlat = 0
+    dimg = false
+    dimg_output_file = 'test_dimg'
+    adatrj = 360.25 
+    interp_type = 'bilinear'
+/ 
+&restart_trc
+    restart_trc_file = 'restart_trc.nc'   
+/ 
