!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> !! NEMO/OCE Configuration namelist : overwrite default values defined in SHARED/namelist_ref !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ! AGRIF ICE configuration ! !!====================================================================== !! *** Domain & Run management namelists *** !! !! !! !! namrun parameters of the run !! namdom space and time domain !! namcfg parameters of the configuration (default: user defined GYRE) !! namwad Wetting and drying (default: OFF) !! namtsd data: temperature & salinity (default: OFF) !! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T) !! namc1d 1D configuration options ("key_c1d") !! namc1d_dyndmp 1D newtonian damping applied on currents ("key_c1d") !! namc1d_uvd 1D data (currents) ("key_c1d") !!====================================================================== ! !----------------------------------------------------------------------- &namrun ! parameters of the run !----------------------------------------------------------------------- cn_exp = "Pacific" ! experience name nn_it000 = 1 ! first time step nn_itend = 80 ! last time step (std 5475) nn_istate = 0 ! output the initial state (1) or not (0) / !----------------------------------------------------------------------- &namdom ! time and space domain !----------------------------------------------------------------------- ln_linssh = .false. ! =T linear free surface ==>> model level are fixed in time ! rn_Dt = 5400. ! time step for the dynamics and tracer / !----------------------------------------------------------------------- &namcfg ! parameters of the configuration (default: user defined GYRE) !----------------------------------------------------------------------- ln_read_cfg = .true. ! (=T) read the domain configuration file cn_domcfg = "ORCA_R2_zps_domcfg_agrif" ! domain configuration filename ! ln_closea = .false. ! F => suppress closed seas (defined by closea_mask field) ! ! from the bathymetry at runtime. / !----------------------------------------------------------------------- &namtsd ! Temperature & Salinity Data (default: OFF) !----------------------------------------------------------------------- ! ! =T read T-S fields for: ln_tsd_init = .true. ! ocean initialisation ln_tsd_dmp = .true. ! T-S restoring (see namtra_dmp) cn_dir = './' ! root directory for the T-S data location !___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! sn_tem = 'data_1m_potential_temperature_nomask', -1. ,'votemper', .true. , .true. , 'yearly' , '' , '' , '' sn_sal = 'data_1m_salinity_nomask' , -1. ,'vosaline', .true. , .true. , 'yearly' , '' , '' , '' / !!====================================================================== !! *** Surface Boundary Condition namelists *** !! !! !! !! namsbc surface boundary condition manager (default: NO selection) !! namsbc_flx flux formulation (ln_flx =T) !! namsbc_blk Bulk formulae formulation (ln_blk =T) !! namsbc_cpl CouPLed formulation ("key_oasis3" ) !! namsbc_sas Stand-Alone Surface module (SAS_SRC only) !! namtra_qsr penetrative solar radiation (ln_traqsr =T) !! namsbc_rnf river runoffs (ln_rnf =T) !! namsbc_isf ice shelf melting/freezing (ln_isfcav =T : read (ln_read_cfg=T) or set or usr_def_zgr ) !! namsbc_iscpl coupling option between land ice model and ocean (ln_isfcav =T) !! namsbc_apr Atmospheric Pressure (ln_apr_dyn =T) !! namsbc_ssr sea surface restoring term (for T and/or S) (ln_ssr =T) !! namsbc_wave external fields from wave model (ln_wave =T) !! namberg iceberg floats (ln_icebergs=T) !!====================================================================== ! !----------------------------------------------------------------------- &namsbc ! Surface Boundary Condition (surface module) !----------------------------------------------------------------------- nn_fsbc = 1 ! frequency of SBC module call ! (also = the frequency of sea-ice & iceberg model call) ! Type of air-sea fluxes ln_blk = .true. ! Bulk formulation (T => fill namsbc_blk ) ! Sea-ice : nn_ice = 2 ! =2 or 3 automatically for SI3 or CICE ("key_si3" or "key_cice") ! except in AGRIF zoom where it has to be specified ! Misc. options of sbc : ln_traqsr = .true. ! Light penetration in the ocean (T => fill namtra_qsr) ln_rnf = .true. ! runoffs (T => fill namsbc_rnf) ln_ssr = .true. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr) nn_fwb = 0 ! FreshWater Budget: =0 unchecked / !----------------------------------------------------------------------- &namsbc_blk ! namsbc_blk generic Bulk formula (ln_blk =T) !----------------------------------------------------------------------- ! ! bulk algorithm : ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008) ln_COARE_3p0 = .false. ! "COARE 3.0" algorithm (Fairall et al. 2003) ln_COARE_3p6 = .false. ! "COARE 3.6" algorithm (Edson et al. 2013) ln_ECMWF = .false. ! "ECMWF" algorithm (IFS cycle 31) ! rn_zqt = 10. ! Air temperature & humidity reference height (m) rn_zu = 10. ! Wind vector reference height (m) ln_Cd_L12 = .false. ! air-ice drags = F(ice concentration) (Lupkes et al. 2012) ln_Cd_L15 = .false. ! air-ice drags = F(ice concentration) (Lupkes et al. 2015) rn_pfac = 1. ! multiplicative factor for precipitation (total & snow) rn_efac = 1. ! multiplicative factor for evaporation (0. or 1.) rn_vfac = 0. ! multiplicative factor for ocean & ice velocity used to ! ! calculate the wind stress (0.=absolute or 1.=relative winds) ln_skin_cs = .false. ! use the cool-skin parameterization (only available in ECMWF and COARE algorithms) !LB ln_skin_wl = .false. ! use the warm-layer " " " ! ln_humi_sph = .true. ! humidity specified below in "sn_humi" is specific humidity [kg/kg] if .true. ln_humi_dpt = .false. ! humidity specified below in "sn_humi" is dew-point temperature [K] if .true. ln_humi_rlh = .false. ! humidity specified below in "sn_humi" is relative humidity [%] if .true. ! cn_dir = './' ! root directory for the bulk data location !___________!_________________________!___________________!___________!_____________!________!___________!______________________________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! sn_wndi = 'u_10.15JUNE2009_fill' , 6. , 'U_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bicubic_noc.nc' , 'Uwnd' , '' sn_wndj = 'v_10.15JUNE2009_fill' , 6. , 'V_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bicubic_noc.nc' , 'Vwnd' , '' sn_qsr = 'ncar_rad.15JUNE2009_fill' , 24. , 'SWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_qlw = 'ncar_rad.15JUNE2009_fill' , 24. , 'LWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_tair = 't_10.15JUNE2009_fill' , 6. , 'T_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_humi = 'q_10.15JUNE2009_fill' , 6. , 'Q_10_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_prec = 'ncar_precip.15JUNE2009_fill', -1. , 'PRC_MOD1', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_snow = 'ncar_precip.15JUNE2009_fill', -1. , 'SNOW' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' sn_slp = 'slp.15JUNE2009_fill' , 6. , 'SLP' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , '' / !----------------------------------------------------------------------- &namtra_qsr ! penetrative solar radiation (ln_traqsr =T) !----------------------------------------------------------------------- ! ! type of penetration (default: NO selection) ln_qsr_rgb = .true. ! RGB light penetration (Red-Green-Blue) ! nn_chldta = 1 ! RGB : Chl data (=1) or cst value (=0) cn_dir = './' ! root directory for the chlorophyl data location !___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! sn_chl ='chlorophyll' , -1. , 'CHLA' , .true. , .true. , 'yearly' , '' , '' , '' / !----------------------------------------------------------------------- &namsbc_rnf ! runoffs (ln_rnf =T) !----------------------------------------------------------------------- ln_rnf_mouth = .true. ! specific treatment at rivers mouths rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T) rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T) cn_dir = './' ! root directory for the location of the runoff files !___________!_____________!___________________!___________!_____________!_________!___________!__________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! sn_rnf = 'runoff_core_monthly', -1. , 'sorunoff', .true. , .true. , 'yearly' , '' , '' , '' sn_cnf = 'runoff_core_monthly', 0. , 'socoefr0', .false. , .true. , 'yearly' , '' , '' , '' sn_s_rnf = 'runoffs' , 24. , 'rosaline', .true. , .true. , 'yearly' , '' , '' , '' sn_t_rnf = 'runoffs' , 24. , 'rotemper', .true. , .true. , 'yearly' , '' , '' , '' sn_dep_rnf = 'runoffs' , 0. , 'rodepth' , .false. , .true. , 'yearly' , '' , '' , '' / !----------------------------------------------------------------------- &namsbc_ssr ! surface boundary condition : sea surface restoring (ln_ssr =T) !----------------------------------------------------------------------- nn_sssr = 2 ! add a damping term to the surface freshwater flux rn_deds = -166.67 ! magnitude of the damping on salinity [mm/day] ln_sssr_bnd = .true. ! flag to bound erp term (associated with nn_sssr=2) rn_sssr_bnd = 4.e0 ! ABS(Max/Min) value of the damping erp term [mm/day] / !----------------------------------------------------------------------- &namberg ! iceberg parameters (default: No iceberg) !----------------------------------------------------------------------- ! iceberg floats are not currently available with AGRIF ! ===>> forced deactivation in icbini.F90 / !!====================================================================== !! *** Lateral boundary condition *** !! !! !! !! namlbc lateral momentum boundary condition (default: NO selection) !! namagrif agrif nested grid ( read by child model only ) ("key_agrif") !! nam_tide Tidal forcing (default: OFF) !! nambdy Unstructured open boundaries (default: OFF) !! nambdy_dta Unstructured open boundaries - external data (see nambdy) !! nambdy_tide tidal forcing at open boundaries (default: OFF) !!====================================================================== ! !----------------------------------------------------------------------- &namlbc ! lateral momentum boundary condition (default: NO selection) !----------------------------------------------------------------------- rn_shlat = 2. ! no slip / !!====================================================================== !! *** Top/Bottom boundary condition *** !! !! !! !! namdrg top/bottom drag coefficient (default: NO selection) !! namdrg_top top friction (ln_OFF=F & ln_isfcav=T) !! namdrg_bot bottom friction (ln_OFF=F) !! nambbc bottom temperature boundary condition (default: OFF) !! nambbl bottom boundary layer scheme (default: OFF) !!====================================================================== ! !----------------------------------------------------------------------- &namdrg ! top/bottom drag coefficient (default: NO selection) !----------------------------------------------------------------------- ln_non_lin = .true. ! non-linear drag: Cd = Cd0 |U| / !----------------------------------------------------------------------- &namdrg_bot ! BOTTOM friction !----------------------------------------------------------------------- / !----------------------------------------------------------------------- &nambbc ! bottom temperature boundary condition (default: OFF) !----------------------------------------------------------------------- ln_trabbc = .true. ! Apply a geothermal heating at the ocean bottom nn_geoflx = 2 ! geothermal heat flux: = 2 read variable flux [mW/m2] cn_dir = './' ! root directory for the geothermal data location !___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________! ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! sn_qgh ='geothermal_heating.nc' , -12. , 'heatflow', .false. , .true. , 'yearly' , '' , '' , '' / !----------------------------------------------------------------------- &nambbl ! bottom boundary layer scheme (default: OFF) !----------------------------------------------------------------------- ln_trabbl = .true. ! Bottom Boundary Layer parameterisation flag nn_bbl_ldf = 1 ! diffusive bbl (=1) or not (=0) nn_bbl_adv = 0 ! advective bbl (=1/2) or not (=0) rn_ahtbbl = 1000. ! lateral mixing coefficient in the bbl [m2/s] rn_gambbl = 10. ! advective bbl coefficient [s] / !!====================================================================== !! Tracer (T & S) namelists !! !! !! !! nameos equation of state (default: NO selection) !! namtra_adv advection scheme (default: NO selection) !! namtra_ldf lateral diffusion scheme (default: NO selection) !! namtra_mle mixed layer eddy param. (Fox-Kemper param.) (default: OFF) !! namtra_eiv eddy induced velocity param. (default: OFF) !! namtra_dmp T & S newtonian damping (default: OFF) !!====================================================================== ! !----------------------------------------------------------------------- &nameos ! ocean Equation Of Seawater (default: NO selection) !----------------------------------------------------------------------- ln_eos80 = .true. ! = Use EOS80 / !----------------------------------------------------------------------- &namtra_adv ! advection scheme for tracer (default: NO selection) !----------------------------------------------------------------------- ln_traadv_fct = .true. ! FCT scheme nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order / !----------------------------------------------------------------------- &namtra_mle ! mixed layer eddy parametrisation (Fox-Kemper) (default: OFF) !----------------------------------------------------------------------- ln_mle = .true. ! (T) use the Mixed Layer Eddy (MLE) parameterisation / !----------------------------------------------------------------------- &namtra_ldf ! lateral diffusion scheme for tracers (default: NO selection) !----------------------------------------------------------------------- ! ! Operator type: ln_traldf_lap = .true. ! laplacian operator ! ! Direction of action: ln_traldf_iso = .true. ! iso-neutral (Standard operator) ! ! iso-neutral options: ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators) ! ! Coefficients: nn_aht_ijk_t = 20 ! space/time variation of eddy coef ! ! = 20 aht = 1/2 Ud. max(e1,e2) rn_Ud = 0.018 ! lateral diffusive velocity [m/s] (nn_aht_ijk_t= 0, 10, 20, 30) rn_Ld = 200.e+3 ! lateral diffusive length [m] (nn_aht_ijk_t= 0, 10) / !----------------------------------------------------------------------- &namtra_eiv ! eddy induced velocity param. (default: OFF) !----------------------------------------------------------------------- ln_ldfeiv =.true. ! use eddy induced velocity parameterization ! ! Coefficients: nn_aei_ijk_t = 21 ! space/time variation of the eiv coeficient ! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation ! ! time invariant coefficients: aei0 = 1/2 Ue*Le rn_Ue = 0.03 ! lateral diffusive velocity [m/s] (nn_aht_ijk_t= 0, 10, 20, 30) rn_Le = 200.e+3 ! lateral diffusive length [m] (nn_aht_ijk_t= 0, 10) ! ln_ldfeiv_dia =.true. ! diagnose eiv stream function and velocities / !----------------------------------------------------------------------- &namtra_dmp ! tracer: T & S newtonian damping (default: OFF) !----------------------------------------------------------------------- ln_tradmp = .true. ! add a damping term (using resto.nc coef.) nn_zdmp = 0 ! vertical shape =0 damping throughout the water column / !!====================================================================== !! *** Dynamics namelists *** !! !! !! !! nam_vvl vertical coordinate options (default: z-star) !! namdyn_adv formulation of the momentum advection (default: NO selection) !! namdyn_vor advection scheme (default: NO selection) !! namdyn_hpg hydrostatic pressure gradient (default: NO selection) !! namdyn_spg surface pressure gradient (default: NO selection) !! namdyn_ldf lateral diffusion scheme (default: NO selection) !! namdta_dyn offline TOP: dynamics read in files (OFF_SRC only) !!====================================================================== ! !----------------------------------------------------------------------- &nam_vvl ! vertical coordinate options (default: z-star) !----------------------------------------------------------------------- / !----------------------------------------------------------------------- &namdyn_adv ! formulation of the momentum advection (default: NO selection) !----------------------------------------------------------------------- ln_dynadv_vec = .true. ! vector form - 2nd centered scheme nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction / !----------------------------------------------------------------------- &namdyn_vor ! Vorticity / Coriolis scheme (default: NO selection) !----------------------------------------------------------------------- ln_dynvor_een = .true. ! energy & enstrophy scheme nn_een_e3f = 0 ! =0 e3f = mean masked e3t divided by 4 / !----------------------------------------------------------------------- &namdyn_hpg ! Hydrostatic pressure gradient option (default: NO selection) !----------------------------------------------------------------------- ln_hpg_sco = .true. ! s-coordinate (standard jacobian formulation) / !----------------------------------------------------------------------- &namdyn_spg ! surface pressure gradient (default: NO selection) !----------------------------------------------------------------------- ln_dynspg_ts = .true. ! split-explicit free surface / !----------------------------------------------------------------------- &namdyn_ldf ! lateral diffusion on momentum (default: NO selection) !----------------------------------------------------------------------- ! ! Type of the operator : ln_dynldf_lap = .true. ! laplacian operator ! ! Direction of action : ln_dynldf_lev = .true. ! iso-level ! ! Coefficient nn_ahm_ijk_t = -30 ! space/time variation of eddy coef ! ! =-30 read in eddy_viscosity_3D.nc / !!====================================================================== !! vertical physics namelists !! !! !! !! namzdf vertical physics manager (default: NO selection) !! namzdf_ric richardson number vertical mixing (ln_zdfric=T) !! namzdf_tke TKE vertical mixing (ln_zdftke=T) !! namzdf_gls GLS vertical mixing (ln_zdfgls=T) !! namzdf_osm OSM vertical diffusion (ln_zdfosm=T) !! namzdf_iwm tidal mixing parameterization (ln_zdfiwm=T) !!====================================================================== ! !----------------------------------------------------------------------- &namzdf ! vertical physics (default: NO selection) !----------------------------------------------------------------------- ! ! type of vertical closure ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke) ! ! ! convection ln_zdfevd = .true. ! Enhanced Vertical Diffusion scheme nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1) rn_evd = 100. ! evd mixing coefficient [m2/s] ! ! ! Coefficients rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if ln_zdfcst=F) rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if ln_zdfcst=F) nn_avb = 0 ! profile for background avt & avm (=1) or not (=0) nn_havtb = 1 ! horizontal shape for avtb (=1) or not (=0) / !----------------------------------------------------------------------- &namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion (ln_zdftke =T) !----------------------------------------------------------------------- rn_eice = 0 ! below sea ice: =0 ON ; =4 OFF when ice fraction > 1/4 / !!====================================================================== !! *** Diagnostics namelists *** !! !! !! !! namtrd dynamics and/or tracer trends (default: OFF) !! namptr Poleward Transport Diagnostics (default: OFF) !! namhsb Heat and salt budgets (default: OFF) !! namdiu Cool skin and warm layer models (default: OFF) !! namdiu Cool skin and warm layer models (default: OFF) !! namflo float parameters (default: OFF) !! nam_diadct transports through some sections (default: OFF) !! nam_dia25h 25h Mean Output (default: OFF) !! namnc4 netcdf4 chunking and compression settings ("key_netcdf4") !!====================================================================== ! !!====================================================================== !! *** Observation & Assimilation *** !! !! !! !! namobs observation and model comparison (default: OFF) !! nam_asminc assimilation increments ('key_asminc') !!====================================================================== ! !!====================================================================== !! *** Miscellaneous namelists *** !! !! !! !! nammpp Massively Parallel Processing ("key_mpp_mpi") !! namctl Control prints (default: OFF) !! namsto Stochastic parametrization of EOS (default: OFF) !!====================================================================== ! ! !----------------------------------------------------------------------- &nammpp ! Massively Parallel Processing ("key_mpp_mpi") !----------------------------------------------------------------------- / !----------------------------------------------------------------------- &namctl ! Control prints (default: OFF) !----------------------------------------------------------------------- / !----------------------------------------------------------------------- &namsto ! Stochastic parametrization of EOS (default: OFF) !----------------------------------------------------------------------- /