MODULE bio_medusa_fin_mod !!====================================================================== !! *** MODULE bio_medusa_fin_mod *** !! Finalisation for TRC_BIO_MEDUSA !!====================================================================== !! History : !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 !!---------------------------------------------------------------------- #if defined key_medusa !!---------------------------------------------------------------------- !! MEDUSA bio-model !!---------------------------------------------------------------------- IMPLICIT NONE PRIVATE PUBLIC bio_medusa_fin ! Called in trcbio_medusa.F90 !!---------------------------------------------------------------------- !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) !! $Id$ !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) !!---------------------------------------------------------------------- CONTAINS SUBROUTINE bio_medusa_fin( kt ) !!--------------------------------------------------------------------- !! *** ROUTINE bio_medusa_fin *** !! This called from TRC_BIO_MEDUSA and !! - ... !!---------------------------------------------------------------------- USE bio_medusa_mod USE dom_oce, ONLY: atfp, atfp1, neuler, rdt, e3t_n, tmask USE in_out_manager, ONLY: lwp, numout # if defined key_iomput USE iom, ONLY: iom_put, lk_iomput # endif USE lbclnk, ONLY: lbc_lnk USE par_medusa, ONLY: jp_medusa_2d, jp_medusa_3d, & jp_medusa_trd USE par_oce, ONLY: jpi, jpim1, jpj, jpjm1, jpk USE phycst, ONLY: rsmall USE sms_medusa, ONLY: jinorgben, jorgben, & f3_co3, f3_h2co3, f3_hco3, & f3_omarg, f3_omcal, f3_pH, & # if defined key_foam_medusa mld_max, pgrow_avg, & ploss_avg, phyt_avg, & # endif za_sed_c, za_sed_ca, za_sed_fe, & za_sed_n, za_sed_si, & zb_sed_c, zb_sed_ca, zb_sed_fe, & zb_sed_n, zb_sed_si, & zn_sed_c, zn_sed_ca, zn_sed_fe, & zn_sed_n, zn_sed_si USE trc, ONLY: med_diag, nittrc000 USE trcnam_trp, ONLY: ln_trcadv_cen2, ln_trcadv_tvd # if defined key_foam_medusa USE zdfmxl, ONLY: hmld # endif !! time (integer timestep) INTEGER, INTENT( in ) :: kt INTEGER :: ji, jj INTEGER :: jn REAL(wp) :: fq0,fq1,fq2,fq3 !!---------------------------------------------------------------------- !! Process benthic in/out fluxes !! These can be handled outside of the 3D calculations since the !! benthic pools (and fluxes) are 2D in nature; this code is !! (shamelessly) borrowed from corresponding code in the LOBSTER !! model !!---------------------------------------------------------------------- !! !! IF(lwp) WRITE(numout,*) 'AXY: rdt = ', rdt if (jorgben.eq.1) then za_sed_n(:,:) = zn_sed_n(:,:) + & ( f_sbenin_n(:,:) + f_fbenin_n(:,:) - & f_benout_n(:,:) ) * (rdt / 86400.) zn_sed_n(:,:) = za_sed_n(:,:) !! za_sed_fe(:,:) = zn_sed_fe(:,:) + & ( f_sbenin_fe(:,:) + f_fbenin_fe(:,:) - & f_benout_fe(:,:) ) * (rdt / 86400.) zn_sed_fe(:,:) = za_sed_fe(:,:) !! za_sed_c(:,:) = zn_sed_c(:,:) + & ( f_sbenin_c(:,:) + f_fbenin_c(:,:) - & f_benout_c(:,:) ) * (rdt / 86400.) zn_sed_c(:,:) = za_sed_c(:,:) endif if (jinorgben.eq.1) then za_sed_si(:,:) = zn_sed_si(:,:) + & ( f_fbenin_si(:,:) - f_benout_si(:,:) ) * & (rdt / 86400.) zn_sed_si(:,:) = za_sed_si(:,:) !! za_sed_ca(:,:) = zn_sed_ca(:,:) + & ( f_fbenin_ca(:,:) - f_benout_ca(:,:) ) * & (rdt / 86400.) zn_sed_ca(:,:) = za_sed_ca(:,:) endif !! if (ibenthic.eq.2) then !! The code below (in this if ... then ... endif loop) is !! effectively commented out because it does not work as !! anticipated; it can be deleted at a later date if (jorgben.eq.1) then za_sed_n(:,:) = ( f_sbenin_n(:,:) + f_fbenin_n(:,:) - & f_benout_n(:,:) ) * rdt za_sed_fe(:,:) = ( f_sbenin_fe(:,:) + f_fbenin_fe(:,:) - & f_benout_fe(:,:) ) * rdt za_sed_c(:,:) = ( f_sbenin_c(:,:) + f_fbenin_c(:,:) - & f_benout_c(:,:) ) * rdt endif if (jinorgben.eq.1) then za_sed_si(:,:) = ( f_fbenin_si(:,:) - f_benout_si(:,:) ) * rdt za_sed_ca(:,:) = ( f_fbenin_ca(:,:) - f_benout_ca(:,:) ) * rdt endif !! !! Leap-frog scheme - only in explicit case, otherwise the !! time stepping is already being done in trczdf !! IF( l_trczdf_exp .AND. (ln_trcadv_cen2 .OR. ln_trcadv_tvd) ) THEN !! zfact = 2. * rdttra(jk) * FLOAT( ndttrc ) !! IF( neuler == 0 .AND. kt == nittrc000 ) zfact = rdttra(jk) * !! FLOAT(ndttrc) !! if (jorgben.eq.1) then !! za_sed_n(:,:) = zb_sed_n(:,:) + ( zfact * za_sed_n(:,:) ) !! za_sed_fe(:,:) = zb_sed_fe(:,:) + ( zfact * za_sed_fe(:,:) ) !! za_sed_c(:,:) = zb_sed_c(:,:) + ( zfact * za_sed_c(:,:) ) !! endif !! if (jinorgben.eq.1) then !! za_sed_si(:,:) = zb_sed_si(:,:) + ( zfact * za_sed_si(:,:) ) !! za_sed_ca(:,:) = zb_sed_ca(:,:) + ( zfact * za_sed_ca(:,:) ) !! endif !! ENDIF !! !! Time filter and swap of arrays IF( ln_trcadv_cen2 .OR. ln_trcadv_tvd ) THEN ! centred or tvd scheme IF( neuler == 0 .AND. kt == nittrc000 ) THEN if (jorgben.eq.1) then zb_sed_n(:,:) = zn_sed_n(:,:) zn_sed_n(:,:) = za_sed_n(:,:) za_sed_n(:,:) = 0.0 !! zb_sed_fe(:,:) = zn_sed_fe(:,:) zn_sed_fe(:,:) = za_sed_fe(:,:) za_sed_fe(:,:) = 0.0 !! zb_sed_c(:,:) = zn_sed_c(:,:) zn_sed_c(:,:) = za_sed_c(:,:) za_sed_c(:,:) = 0.0 endif if (jinorgben.eq.1) then zb_sed_si(:,:) = zn_sed_si(:,:) zn_sed_si(:,:) = za_sed_si(:,:) za_sed_si(:,:) = 0.0 !! zb_sed_ca(:,:) = zn_sed_ca(:,:) zn_sed_ca(:,:) = za_sed_ca(:,:) za_sed_ca(:,:) = 0.0 endif ELSE if (jorgben.eq.1) then zb_sed_n(:,:) = (atfp * & ( zb_sed_n(:,:) + za_sed_n(:,:) )) + & (atfp1 * zn_sed_n(:,:) ) zn_sed_n(:,:) = za_sed_n(:,:) za_sed_n(:,:) = 0.0 !! zb_sed_fe(:,:) = (atfp * & ( zb_sed_fe(:,:) + za_sed_fe(:,:) )) + & (atfp1 * zn_sed_fe(:,:)) zn_sed_fe(:,:) = za_sed_fe(:,:) za_sed_fe(:,:) = 0.0 !! zb_sed_c(:,:) = (atfp * & ( zb_sed_c(:,:) + za_sed_c(:,:) )) + & (atfp1 * zn_sed_c(:,:) ) zn_sed_c(:,:) = za_sed_c(:,:) za_sed_c(:,:) = 0.0 endif if (jinorgben.eq.1) then zb_sed_si(:,:) = (atfp * & ( zb_sed_si(:,:) + za_sed_si(:,:) )) + & (atfp1 * zn_sed_si(:,:)) zn_sed_si(:,:) = za_sed_si(:,:) za_sed_si(:,:) = 0.0 !! zb_sed_ca(:,:) = (atfp * & ( zb_sed_ca(:,:) + za_sed_ca(:,:) )) + & (atfp1 * zn_sed_ca(:,:)) zn_sed_ca(:,:) = za_sed_ca(:,:) za_sed_ca(:,:) = 0.0 endif ENDIF ELSE ! case of smolar scheme or muscl if (jorgben.eq.1) then zb_sed_n(:,:) = za_sed_n(:,:) zn_sed_n(:,:) = za_sed_n(:,:) za_sed_n(:,:) = 0.0 !! zb_sed_fe(:,:) = za_sed_fe(:,:) zn_sed_fe(:,:) = za_sed_fe(:,:) za_sed_fe(:,:) = 0.0 !! zb_sed_c(:,:) = za_sed_c(:,:) zn_sed_c(:,:) = za_sed_c(:,:) za_sed_c(:,:) = 0.0 endif if (jinorgben.eq.1) then zb_sed_si(:,:) = za_sed_si(:,:) zn_sed_si(:,:) = za_sed_si(:,:) za_sed_si(:,:) = 0.0 !! zb_sed_ca(:,:) = za_sed_ca(:,:) zn_sed_ca(:,:) = za_sed_ca(:,:) za_sed_ca(:,:) = 0.0 endif ENDIF endif # if defined key_foam_medusa !!---------------------------------------------------------------------- !! Diagnostics required for ocean colour assimilation: !! Mixed layer average phytoplankton growth, loss and concentration !! Maximum mixed layer depth !!---------------------------------------------------------------------- !! DO jj = 2,jpjm1 DO ji = 2,jpim1 pgrow_avg(ji,jj) = pgrow_avg(ji,jj) / hmld(ji,jj) ploss_avg(ji,jj) = ploss_avg(ji,jj) / hmld(ji,jj) phyt_avg(ji,jj) = phyt_avg(ji,jj) / hmld(ji,jj) IF ( hmld(ji,jj) .GT. mld_max(ji,jj) ) THEN mld_max(ji,jj) = hmld(ji,jj) ENDIF END DO END DO # endif # if defined key_debug_medusa !! AXY (12/07/17) !!----------------------------------------------------------------- !! Check conservation of MEDUSA's sinks-minus-sources using fflx_X !! diagnostics (i.e. biogeochemical processes only) !! - fflx_X diagnostics *should* include all transfers between !! modelled components !! - they should also include gains / losses due to air-sea !! fluxes of C and O2, aeolian and seafloor inputs of Fe, and !! inputs from seafloor "benthic buckets" (N, Si, Fe, C and !! alkalinity) !! - however, they do not include the transfer of material to !! "benthic buckets" by sedimenting slow- and fast-sinking !! detritus since these are separate 2D reservoirs !! - consequently, for a given water column, the integrated !! fluxes should sum to the "loss" of material to the "benthic !! buckets" !! - if they do not, this suggests that MEDUSA contains errors !! in its accounting (e.g. processes omitted from calculated !! fluxes) !! - here, the local integrated fluxes and benthic inputs (plus !! air-sea fluxes in the case of C) are reported together with !! the resulting error !! - only N, Si, C and alkalinity inventories considered; Fe and !! O2 overlooked because of wholesale loss (and addition, in !! the case of O2) of these tracers within the water column !!----------------------------------------------------------------- !! !! nitrogen DO jj = 2,jpjm1 DO ji = 2,jpim1 if (tmask(ji,jj,1) == 1) then fq0 = fflx_n(ji,jj) fq1 = f_sbenin_n(ji,jj) + f_fbenin_n(ji,jj) fq2 = fq0 + fq1 IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & 'AXY N cons: (i,j)=',ji,jj,', (flx,ben,err)=', & fq0,fq1,fq2 ENDIF ENDDO ENDDO !! silicon DO jj = 2,jpjm1 DO ji = 2,jpim1 if (tmask(ji,jj,1) == 1) then fq0 = fflx_si(ji,jj) fq1 = f_fbenin_si(ji,jj) fq2 = fq0 + fq1 IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & 'AXY Si cons: (i,j)=',ji,jj,', (flx,ben,err)=', & fq0,fq1,fq2 ENDIF ENDDO ENDDO !! carbon DO jj = 2,jpjm1 DO ji = 2,jpim1 if (tmask(ji,jj,1) == 1) then fq0 = fflx_c(ji,jj) fq1 = f_sbenin_c(ji,jj) + f_fbenin_c(ji,jj) + f_fbenin_ca(ji,jj) fq2 = f_co2flux(ji,jj) * e3t_n(ji,jj,1) fq3 = fq0 + fq1 IF (lwp) write (numout,'(a,2i3,a,4f15.10)') & 'AXY C cons: (i,j)=',ji,jj,', (flx,ben,asf,err)=', & fq0,fq1,fq2,fq3 ENDIF ENDDO ENDDO !! alkalinity DO jj = 2,jpjm1 DO ji = 2,jpim1 if (tmask(ji,jj,1) == 1) then fq0 = fflx_a(ji,jj) fq1 = 2.0 * f_fbenin_ca(ji,jj) fq2 = fq0 + fq1 IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & 'AXY alk cons: (i,j)=',ji,jj,', (flx,ben,err)=', & fq0,fq1,fq2 ENDIF ENDDO ENDDO # endif !!!--------------------------------------------------------------- !! Add very last diag calculations !!!--------------------------------------------------------------- DO jj = 2,jpjm1 DO ji = 2,jpim1 !! IF( med_diag%PN_JLIM%dgsave ) THEN fjln2d(ji,jj) = fjln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) ENDIF IF( med_diag%PN_NLIM%dgsave ) THEN fnln2d(ji,jj) = fnln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) ENDIF IF( med_diag%PN_FELIM%dgsave ) THEN ffln2d(ji,jj) = ffln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) ENDIF IF( med_diag%PD_JLIM%dgsave ) THEN fjld2d(ji,jj) = fjld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) ENDIF IF( med_diag%PD_NLIM%dgsave ) THEN fnld2d(ji,jj) = fnld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) ENDIF IF( med_diag%PD_FELIM%dgsave ) THEN ffld2d(ji,jj) = ffld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) ENDIF IF( med_diag%PD_SILIM%dgsave ) THEN fsld2d2(ji,jj) = fsld2d2(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) ENDIF IF( med_diag%PDSILIM2%dgsave ) THEN fsld2d(ji,jj) = fsld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) ENDIF ENDDO ENDDO !!---------------------------------------------------------------- !! Add in XML diagnostics stuff !!---------------------------------------------------------------- !! !! ** 2D diagnostics # if defined key_debug_medusa IF (lwp) write (numout,*) 'bio_medusa_fin: export all diag kt = ', kt CALL flush(numout) # endif IF ( med_diag%INVTN%dgsave ) THEN CALL iom_put( "INVTN" , ftot_n ) ENDIF IF ( med_diag%INVTSI%dgsave ) THEN CALL iom_put( "INVTSI" , ftot_si ) ENDIF IF ( med_diag%INVTFE%dgsave ) THEN CALL iom_put( "INVTFE" , ftot_fe ) ENDIF IF ( med_diag%ML_PRN%dgsave ) THEN CALL iom_put( "ML_PRN" , fprn_ml ) ENDIF IF ( med_diag%ML_PRD%dgsave ) THEN CALL iom_put( "ML_PRD" , fprd_ml ) ENDIF IF ( med_diag%OCAL_LVL%dgsave ) THEN CALL iom_put( "OCAL_LVL" , fccd ) ENDIF IF ( med_diag%PN_JLIM%dgsave ) THEN CALL iom_put( "PN_JLIM" , fjln2d ) DEALLOCATE( fjln2d ) ENDIF IF ( med_diag%PN_NLIM%dgsave ) THEN CALL iom_put( "PN_NLIM" , fnln2d ) DEALLOCATE( fnln2d ) ENDIF IF ( med_diag%PN_FELIM%dgsave ) THEN CALL iom_put( "PN_FELIM" , ffln2d ) DEALLOCATE( ffln2d ) ENDIF IF ( med_diag%PD_JLIM%dgsave ) THEN CALL iom_put( "PD_JLIM" , fjld2d ) DEALLOCATE( fjld2d ) ENDIF IF ( med_diag%PD_NLIM%dgsave ) THEN CALL iom_put( "PD_NLIM" , fnld2d ) DEALLOCATE( fnld2d ) ENDIF IF ( med_diag%PD_FELIM%dgsave ) THEN CALL iom_put( "PD_FELIM" , ffld2d ) DEALLOCATE( ffld2d ) ENDIF IF ( med_diag%PD_SILIM%dgsave ) THEN CALL iom_put( "PD_SILIM" , fsld2d2 ) DEALLOCATE( fsld2d2 ) ENDIF IF ( med_diag%PDSILIM2%dgsave ) THEN CALL iom_put( "PDSILIM2" , fsld2d ) DEALLOCATE( fsld2d ) ENDIF IF ( med_diag%INTFLX_N%dgsave ) THEN CALL iom_put( "INTFLX_N" , fflx_n ) ENDIF IF ( med_diag%INTFLX_SI%dgsave ) THEN CALL iom_put( "INTFLX_SI" , fflx_si ) ENDIF IF ( med_diag%INTFLX_FE%dgsave ) THEN CALL iom_put( "INTFLX_FE" , fflx_fe ) ENDIF IF ( med_diag%INT_PN%dgsave ) THEN CALL iom_put( "INT_PN" , ftot_pn ) ENDIF IF ( med_diag%INT_PD%dgsave ) THEN CALL iom_put( "INT_PD" , ftot_pd ) ENDIF IF ( med_diag%INT_ZMI%dgsave ) THEN CALL iom_put( "INT_ZMI" , ftot_zmi ) ENDIF IF ( med_diag%INT_ZME%dgsave ) THEN CALL iom_put( "INT_ZME" , ftot_zme ) ENDIF IF ( med_diag%INT_DET%dgsave ) THEN CALL iom_put( "INT_DET" , ftot_det ) ENDIF IF ( med_diag%INT_DTC%dgsave ) THEN CALL iom_put( "INT_DTC" , ftot_dtc ) ENDIF IF ( med_diag%BEN_N%dgsave ) THEN CALL iom_put( "BEN_N" , za_sed_n ) ENDIF IF ( med_diag%BEN_FE%dgsave ) THEN CALL iom_put( "BEN_FE" , za_sed_fe ) ENDIF IF ( med_diag%BEN_C%dgsave ) THEN CALL iom_put( "BEN_C" , za_sed_c ) ENDIF IF ( med_diag%BEN_SI%dgsave ) THEN CALL iom_put( "BEN_SI" , za_sed_si ) ENDIF IF ( med_diag%BEN_CA%dgsave ) THEN CALL iom_put( "BEN_CA" , za_sed_ca ) ENDIF IF ( med_diag%RUNOFF%dgsave ) THEN CALL iom_put( "RUNOFF" , f_runoff ) ENDIF # if defined key_roam IF ( med_diag%N_PROD%dgsave ) THEN CALL iom_put( "N_PROD" , fnit_prod ) ENDIF IF ( med_diag%N_CONS%dgsave ) THEN CALL iom_put( "N_CONS" , fnit_cons ) ENDIF IF ( med_diag%C_PROD%dgsave ) THEN CALL iom_put( "C_PROD" , fcar_prod ) ENDIF IF ( med_diag%C_CONS%dgsave ) THEN CALL iom_put( "C_CONS" , fcar_cons ) ENDIF IF ( med_diag%O2_PROD%dgsave ) THEN CALL iom_put( "O2_PROD" , foxy_prod ) ENDIF IF ( med_diag%O2_CONS%dgsave ) THEN CALL iom_put( "O2_CONS" , foxy_cons ) ENDIF IF ( med_diag%O2_ANOX%dgsave ) THEN CALL iom_put( "O2_ANOX" , foxy_anox ) ENDIF IF ( med_diag%INVTC%dgsave ) THEN CALL iom_put( "INVTC" , ftot_c ) ENDIF IF ( med_diag%INVTALK%dgsave ) THEN CALL iom_put( "INVTALK" , ftot_a ) ENDIF IF ( med_diag%INVTO2%dgsave ) THEN CALL iom_put( "INVTO2" , ftot_o2 ) ENDIF IF ( med_diag%COM_RESP%dgsave ) THEN CALL iom_put( "COM_RESP" , fcomm_resp ) ENDIF # endif !! !! diagnostic filled in the i-j-k main loop !!-------------------------------------------- IF ( med_diag%PRN%dgsave ) THEN CALL iom_put( "PRN" , fprn2d ) DEALLOCATE( fprn2d ) ENDIF IF ( med_diag%MPN%dgsave ) THEN CALL iom_put( "MPN" ,fdpn2d ) DEALLOCATE( fdpn2d ) ENDIF IF ( med_diag%PRD%dgsave ) THEN CALL iom_put( "PRD" ,fprd2d ) DEALLOCATE( fprd2d ) ENDIF IF( med_diag%MPD%dgsave ) THEN CALL iom_put( "MPD" , fdpd2d ) DEALLOCATE( fdpd2d ) ENDIF ! IF( med_diag%DSED%dgsave ) THEN ! CALL iom_put( "DSED" , ftot_n ) ! ENDIF IF( med_diag%OPAL%dgsave ) THEN CALL iom_put( "OPAL" , fprds2d ) DEALLOCATE( fprds2d ) ENDIF IF( med_diag%OPALDISS%dgsave ) THEN CALL iom_put( "OPALDISS" , fsdiss2d ) DEALLOCATE( fsdiss2d ) ENDIF IF( med_diag%GMIPn%dgsave ) THEN CALL iom_put( "GMIPn" , fgmipn2d ) DEALLOCATE( fgmipn2d ) ENDIF IF( med_diag%GMID%dgsave ) THEN CALL iom_put( "GMID" , fgmid2d ) DEALLOCATE( fgmid2d ) ENDIF IF( med_diag%MZMI%dgsave ) THEN CALL iom_put( "MZMI" , fdzmi2d ) DEALLOCATE( fdzmi2d ) ENDIF IF( med_diag%GMEPN%dgsave ) THEN CALL iom_put( "GMEPN" , fgmepn2d ) DEALLOCATE( fgmepn2d ) ENDIF IF( med_diag%GMEPD%dgsave ) THEN CALL iom_put( "GMEPD" , fgmepd2d ) DEALLOCATE( fgmepd2d ) ENDIF IF( med_diag%GMEZMI%dgsave ) THEN CALL iom_put( "GMEZMI" , fgmezmi2d ) DEALLOCATE( fgmezmi2d ) ENDIF IF( med_diag%GMED%dgsave ) THEN CALL iom_put( "GMED" , fgmed2d ) DEALLOCATE( fgmed2d ) ENDIF IF( med_diag%MZME%dgsave ) THEN CALL iom_put( "MZME" , fdzme2d ) DEALLOCATE( fdzme2d ) ENDIF ! IF( med_diag%DEXP%dgsave ) THEN ! CALL iom_put( "DEXP" , ftot_n ) ! ENDIF IF( med_diag%DETN%dgsave ) THEN CALL iom_put( "DETN" , fslown2d ) DEALLOCATE( fslown2d ) ENDIF IF( med_diag%MDET%dgsave ) THEN CALL iom_put( "MDET" , fdd2d ) DEALLOCATE( fdd2d ) ENDIF IF( med_diag%AEOLIAN%dgsave ) THEN CALL iom_put( "AEOLIAN" , ffetop2d ) DEALLOCATE( ffetop2d ) ENDIF IF( med_diag%BENTHIC%dgsave ) THEN CALL iom_put( "BENTHIC" , ffebot2d ) DEALLOCATE( ffebot2d ) ENDIF IF( med_diag%SCAVENGE%dgsave ) THEN CALL iom_put( "SCAVENGE" , ffescav2d ) DEALLOCATE( ffescav2d ) ENDIF !! IF( med_diag%TOTREG_N%dgsave ) THEN CALL iom_put( "TOTREG_N" , fregen2d ) DEALLOCATE( fregen2d ) ENDIF IF( med_diag%TOTRG_SI%dgsave ) THEN CALL iom_put( "TOTRG_SI" , fregensi2d ) DEALLOCATE( fregensi2d ) ENDIF !! IF( med_diag%FASTN%dgsave ) THEN CALL iom_put( "FASTN" , ftempn2d ) DEALLOCATE( ftempn2d ) ENDIF IF( med_diag%FASTSI%dgsave ) THEN CALL iom_put( "FASTSI" , ftempsi2d ) DEALLOCATE( ftempsi2d ) ENDIF IF( med_diag%FASTFE%dgsave ) THEN CALL iom_put( "FASTFE" , ftempfe2d ) DEALLOCATE( ftempfe2d ) ENDIF IF( med_diag%FASTC%dgsave ) THEN CALL iom_put( "FASTC" , ftempc2d ) DEALLOCATE( ftempc2d ) ENDIF IF( med_diag%FASTCA%dgsave ) THEN CALL iom_put( "FASTCA" , ftempca2d ) DEALLOCATE( ftempca2d ) ENDIF !! IF( med_diag%REMINN%dgsave ) THEN CALL iom_put( "REMINN" , freminn2d ) DEALLOCATE( freminn2d ) ENDIF IF( med_diag%REMINSI%dgsave ) THEN CALL iom_put( "REMINSI" , freminsi2d ) DEALLOCATE( freminsi2d ) ENDIF IF( med_diag%REMINFE%dgsave ) THEN CALL iom_put( "REMINFE" , freminfe2d ) DEALLOCATE( freminfe2d ) ENDIF IF( med_diag%REMINC%dgsave ) THEN CALL iom_put( "REMINC" , freminc2d ) DEALLOCATE( freminc2d ) ENDIF IF( med_diag%REMINCA%dgsave ) THEN CALL iom_put( "REMINCA" , freminca2d ) DEALLOCATE( freminca2d ) ENDIF IF( med_diag%SEAFLRN%dgsave ) THEN CALL iom_put( "SEAFLRN" , fsedn ) ENDIF IF( med_diag%SEAFLRSI%dgsave ) THEN CALL iom_put( "SEAFLRSI" , fsedsi ) ENDIF IF( med_diag%SEAFLRFE%dgsave ) THEN CALL iom_put( "SEAFLRFE" , fsedfe ) ENDIF IF( med_diag%SEAFLRC%dgsave ) THEN CALL iom_put( "SEAFLRC" , fsedc ) ENDIF IF( med_diag%SEAFLRCA%dgsave ) THEN CALL iom_put( "SEAFLRCA" , fsedca ) ENDIF !! # if defined key_roam !! IF( med_diag%RIV_N%dgsave ) THEN CALL iom_put( "RIV_N" , rivn2d ) DEALLOCATE( rivn2d ) ENDIF IF( med_diag%RIV_SI%dgsave ) THEN CALL iom_put( "RIV_SI" , rivsi2d ) DEALLOCATE( rivsi2d ) ENDIF IF( med_diag%RIV_C%dgsave ) THEN CALL iom_put( "RIV_C" , rivc2d ) DEALLOCATE( rivc2d ) ENDIF IF( med_diag%RIV_ALK%dgsave ) THEN CALL iom_put( "RIV_ALK" , rivalk2d ) DEALLOCATE( rivalk2d ) ENDIF IF( med_diag%DETC%dgsave ) THEN CALL iom_put( "DETC" , fslowc2d ) DEALLOCATE( fslowc2d ) ENDIF !! IF( med_diag%PN_LLOSS%dgsave ) THEN CALL iom_put( "PN_LLOSS" , fdpn22d ) DEALLOCATE( fdpn22d ) ENDIF IF( med_diag%PD_LLOSS%dgsave ) THEN CALL iom_put( "PD_LLOSS" , fdpd22d ) DEALLOCATE( fdpd22d ) ENDIF IF( med_diag%ZI_LLOSS%dgsave ) THEN CALL iom_put( "ZI_LLOSS" , fdzmi22d ) DEALLOCATE( fdzmi22d ) ENDIF IF( med_diag%ZE_LLOSS%dgsave ) THEN CALL iom_put( "ZE_LLOSS" , fdzme22d ) DEALLOCATE( fdzme22d ) ENDIF IF( med_diag%ZI_MES_N%dgsave ) THEN CALL iom_put( "ZI_MES_N" , zimesn2d ) DEALLOCATE( zimesn2d ) ENDIF IF( med_diag%ZI_MES_D%dgsave ) THEN CALL iom_put( "ZI_MES_D" , zimesd2d ) DEALLOCATE( zimesd2d ) ENDIF IF( med_diag%ZI_MES_C%dgsave ) THEN CALL iom_put( "ZI_MES_C" , zimesc2d ) DEALLOCATE( zimesc2d ) ENDIF IF( med_diag%ZI_MESDC%dgsave ) THEN CALL iom_put( "ZI_MESDC" ,zimesdc2d ) DEALLOCATE( zimesdc2d ) ENDIF IF( med_diag%ZI_EXCR%dgsave ) THEN CALL iom_put( "ZI_EXCR" , ziexcr2d ) DEALLOCATE( ziexcr2d ) ENDIF IF( med_diag%ZI_RESP%dgsave ) THEN CALL iom_put( "ZI_RESP" , ziresp2d ) DEALLOCATE( ziresp2d ) ENDIF IF( med_diag%ZI_GROW%dgsave ) THEN CALL iom_put( "ZI_GROW" , zigrow2d ) DEALLOCATE( zigrow2d ) ENDIF IF( med_diag%ZE_MES_N%dgsave ) THEN CALL iom_put( "ZE_MES_N" , zemesn2d ) DEALLOCATE( zemesn2d ) ENDIF IF( med_diag%ZE_MES_D%dgsave ) THEN CALL iom_put( "ZE_MES_D" , zemesd2d ) DEALLOCATE( zemesd2d ) ENDIF IF( med_diag%ZE_MES_C%dgsave ) THEN CALL iom_put( "ZE_MES_C" , zemesc2d ) DEALLOCATE( zemesc2d ) ENDIF IF( med_diag%ZE_MESDC%dgsave ) THEN CALL iom_put( "ZE_MESDC" , zemesdc2d ) DEALLOCATE( zemesdc2d ) ENDIF IF( med_diag%ZE_EXCR%dgsave ) THEN CALL iom_put( "ZE_EXCR" , zeexcr2d ) DEALLOCATE( zeexcr2d ) ENDIF IF( med_diag%ZE_RESP%dgsave ) THEN CALL iom_put( "ZE_RESP" , zeresp2d ) DEALLOCATE( zeresp2d ) ENDIF IF( med_diag%ZE_GROW%dgsave ) THEN CALL iom_put( "ZE_GROW" , zegrow2d ) DEALLOCATE( zegrow2d ) ENDIF IF( med_diag%MDETC%dgsave ) THEN CALL iom_put( "MDETC" , mdetc2d ) DEALLOCATE( mdetc2d ) ENDIF IF( med_diag%GMIDC%dgsave ) THEN CALL iom_put( "GMIDC" , gmidc2d ) DEALLOCATE( gmidc2d ) ENDIF IF( med_diag%GMEDC%dgsave ) THEN CALL iom_put( "GMEDC" , gmedc2d ) DEALLOCATE( gmedc2d ) ENDIF IF( med_diag%IBEN_N%dgsave ) THEN CALL iom_put( "IBEN_N" , iben_n2d ) DEALLOCATE( iben_n2d ) ENDIF IF( med_diag%IBEN_FE%dgsave ) THEN CALL iom_put( "IBEN_FE" , iben_fe2d ) DEALLOCATE( iben_fe2d ) ENDIF IF( med_diag%IBEN_C%dgsave ) THEN CALL iom_put( "IBEN_C" , iben_c2d ) DEALLOCATE( iben_c2d ) ENDIF IF( med_diag%IBEN_SI%dgsave ) THEN CALL iom_put( "IBEN_SI" , iben_si2d ) DEALLOCATE( iben_si2d ) ENDIF IF( med_diag%IBEN_CA%dgsave ) THEN CALL iom_put( "IBEN_CA" , iben_ca2d ) DEALLOCATE( iben_ca2d ) ENDIF IF( med_diag%OBEN_N%dgsave ) THEN CALL iom_put( "OBEN_N" , oben_n2d ) DEALLOCATE( oben_n2d ) ENDIF IF( med_diag%OBEN_FE%dgsave ) THEN CALL iom_put( "OBEN_FE" , oben_fe2d ) DEALLOCATE( oben_fe2d ) ENDIF IF( med_diag%OBEN_C%dgsave ) THEN CALL iom_put( "OBEN_C" , oben_c2d ) DEALLOCATE( oben_c2d ) ENDIF IF( med_diag%OBEN_SI%dgsave ) THEN CALL iom_put( "OBEN_SI" , oben_si2d ) DEALLOCATE( oben_si2d ) ENDIF IF( med_diag%OBEN_CA%dgsave ) THEN CALL iom_put( "OBEN_CA" , oben_ca2d ) DEALLOCATE( oben_ca2d ) ENDIF IF( med_diag%SFR_OCAL%dgsave ) THEN CALL iom_put( "SFR_OCAL" , sfr_ocal2d ) DEALLOCATE( sfr_ocal2d ) ENDIF IF( med_diag%SFR_OARG%dgsave ) THEN CALL iom_put( "SFR_OARG" , sfr_oarg2d ) DEALLOCATE( sfr_oarg2d ) ENDIF IF( med_diag%LYSO_CA%dgsave ) THEN CALL iom_put( "LYSO_CA" , lyso_ca2d ) DEALLOCATE( lyso_ca2d ) ENDIF # endif !! !! ** 3D diagnostics IF( med_diag%TPP3%dgsave ) THEN CALL iom_put( "TPP3" , tpp3d ) DEALLOCATE( tpp3d ) ENDIF IF( med_diag%DETFLUX3%dgsave ) THEN CALL iom_put( "DETFLUX3" , detflux3d ) DEALLOCATE( detflux3d ) ENDIF IF( med_diag%REMIN3N%dgsave ) THEN CALL iom_put( "REMIN3N" , remin3dn ) DEALLOCATE( remin3dn ) ENDIF # if defined key_roam IF( med_diag%PH3%dgsave ) THEN CALL iom_put( "PH3" , f3_pH ) ENDIF IF( med_diag%OM_CAL3%dgsave ) THEN CALL iom_put( "OM_CAL3" , f3_omcal ) ENDIF !! !! AXY (09/11/16): 2D CMIP6 diagnostics IF( med_diag%INTDISSIC%dgsave ) THEN CALL iom_put( "INTDISSIC" , intdissic ) DEALLOCATE( intdissic ) ENDIF IF( med_diag%INTDISSIN%dgsave ) THEN CALL iom_put( "INTDISSIN" , intdissin ) DEALLOCATE( intdissin ) ENDIF IF( med_diag%INTDISSISI%dgsave ) THEN CALL iom_put( "INTDISSISI" , intdissisi ) DEALLOCATE( intdissisi ) ENDIF IF( med_diag%INTTALK%dgsave ) THEN CALL iom_put( "INTTALK" , inttalk ) DEALLOCATE( inttalk ) ENDIF IF( med_diag%O2min%dgsave ) THEN CALL iom_put( "O2min" , o2min ) DEALLOCATE( o2min ) ENDIF IF( med_diag%ZO2min%dgsave ) THEN CALL iom_put( "ZO2min" , zo2min ) DEALLOCATE( zo2min ) ENDIF IF( med_diag%FBDDTALK%dgsave ) THEN CALL iom_put( "FBDDTALK" , fbddtalk ) DEALLOCATE( fbddtalk ) ENDIF IF( med_diag%FBDDTDIC%dgsave ) THEN CALL iom_put( "FBDDTDIC" , fbddtdic ) DEALLOCATE( fbddtdic ) ENDIF IF( med_diag%FBDDTDIFE%dgsave ) THEN CALL iom_put( "FBDDTDIFE" , fbddtdife ) DEALLOCATE( fbddtdife ) ENDIF IF( med_diag%FBDDTDIN%dgsave ) THEN CALL iom_put( "FBDDTDIN" , fbddtdin ) DEALLOCATE( fbddtdin ) ENDIF IF( med_diag%FBDDTDISI%dgsave ) THEN CALL iom_put( "FBDDTDISI" , fbddtdisi ) DEALLOCATE( fbddtdisi ) ENDIF !! !! AXY (09/11/16): 3D CMIP6 diagnostics IF( med_diag%TPPD3%dgsave ) THEN CALL iom_put( "TPPD3" , tppd3 ) DEALLOCATE( tppd3 ) ENDIF IF( med_diag%BDDTALK3%dgsave ) THEN CALL iom_put( "BDDTALK3" , bddtalk3 ) DEALLOCATE( bddtalk3 ) ENDIF IF( med_diag%BDDTDIC3%dgsave ) THEN CALL iom_put( "BDDTDIC3" , bddtdic3 ) DEALLOCATE( bddtdic3 ) ENDIF IF( med_diag%BDDTDIFE3%dgsave ) THEN CALL iom_put( "BDDTDIFE3" , bddtdife3 ) DEALLOCATE( bddtdife3 ) ENDIF IF( med_diag%BDDTDIN3%dgsave ) THEN CALL iom_put( "BDDTDIN3" , bddtdin3 ) DEALLOCATE( bddtdin3 ) ENDIF IF( med_diag%BDDTDISI3%dgsave ) THEN CALL iom_put( "BDDTDISI3" , bddtdisi3 ) DEALLOCATE( bddtdisi3 ) ENDIF IF( med_diag%FD_NIT3%dgsave ) THEN CALL iom_put( "FD_NIT3" , fd_nit3 ) DEALLOCATE( fd_nit3 ) ENDIF IF( med_diag%FD_SIL3%dgsave ) THEN CALL iom_put( "FD_SIL3" , fd_sil3 ) DEALLOCATE( fd_sil3 ) ENDIF IF( med_diag%FD_CAL3%dgsave ) THEN CALL iom_put( "FD_CAL3" , fd_cal3 ) DEALLOCATE( fd_cal3 ) ENDIF IF( med_diag%FD_CAR3%dgsave ) THEN CALL iom_put( "FD_CAR3" , fd_car3 ) DEALLOCATE( fd_car3 ) ENDIF IF( med_diag%CO33%dgsave ) THEN CALL iom_put( "CO33" , f3_co3 ) ENDIF IF( med_diag%CO3SATARAG3%dgsave ) THEN CALL iom_put( "CO3SATARAG3" , f3_omarg ) ENDIF IF( med_diag%CO3SATCALC3%dgsave ) THEN CALL iom_put( "CO3SATCALC3" , f3_omcal ) ENDIF IF( med_diag%EXPC3%dgsave ) THEN CALL iom_put( "EXPC3" , expc3 ) DEALLOCATE( expc3 ) ENDIF IF( med_diag%EXPN3%dgsave ) THEN CALL iom_put( "EXPN3" , expn3 ) DEALLOCATE( expn3 ) ENDIF IF( med_diag%DCALC3%dgsave ) THEN CALL iom_put( "DCALC3" , dcalc3 ) DEALLOCATE( dcalc3 ) ENDIF IF( med_diag%FEDISS3%dgsave ) THEN CALL iom_put( "FEDISS3" , fediss3 ) DEALLOCATE( fediss3 ) ENDIF IF( med_diag%FESCAV3%dgsave ) THEN CALL iom_put( "FESCAV3" , fescav3 ) DEALLOCATE( fescav3 ) ENDIF IF( med_diag%MIGRAZP3%dgsave ) THEN CALL iom_put( "MIGRAZP3" , migrazp3 ) DEALLOCATE( migrazp3 ) ENDIF IF( med_diag%MIGRAZD3%dgsave ) THEN CALL iom_put( "MIGRAZD3" , migrazd3 ) DEALLOCATE( migrazd3 ) ENDIF IF( med_diag%MEGRAZP3%dgsave ) THEN CALL iom_put( "MEGRAZP3" , megrazp3 ) DEALLOCATE( megrazp3 ) ENDIF IF( med_diag%MEGRAZD3%dgsave ) THEN CALL iom_put( "MEGRAZD3" , megrazd3 ) DEALLOCATE( megrazd3 ) ENDIF IF( med_diag%MEGRAZZ3%dgsave ) THEN CALL iom_put( "MEGRAZZ3" , megrazz3 ) DEALLOCATE( megrazz3 ) ENDIF IF( med_diag%O2SAT3%dgsave ) THEN CALL iom_put( "O2SAT3" , o2sat3 ) DEALLOCATE( o2sat3 ) ENDIF IF( med_diag%PBSI3%dgsave ) THEN CALL iom_put( "PBSI3" , pbsi3 ) DEALLOCATE( pbsi3 ) ENDIF IF( med_diag%PCAL3%dgsave ) THEN CALL iom_put( "PCAL3" , pcal3 ) DEALLOCATE( pcal3 ) ENDIF IF( med_diag%REMOC3%dgsave ) THEN CALL iom_put( "REMOC3" , remoc3 ) DEALLOCATE( remoc3 ) ENDIF IF( med_diag%PNLIMJ3%dgsave ) THEN CALL iom_put( "PNLIMJ3" , pnlimj3 ) DEALLOCATE( pnlimj3 ) ENDIF IF( med_diag%PNLIMN3%dgsave ) THEN CALL iom_put( "PNLIMN3" , pnlimn3 ) DEALLOCATE( pnlimn3 ) ENDIF IF( med_diag%PNLIMFE3%dgsave ) THEN CALL iom_put( "PNLIMFE3" , pnlimfe3 ) DEALLOCATE( pnlimfe3 ) ENDIF IF( med_diag%PDLIMJ3%dgsave ) THEN CALL iom_put( "PDLIMJ3" , pdlimj3 ) DEALLOCATE( pdlimj3 ) ENDIF IF( med_diag%PDLIMN3%dgsave ) THEN CALL iom_put( "PDLIMN3" , pdlimn3 ) DEALLOCATE( pdlimn3 ) ENDIF IF( med_diag%PDLIMFE3%dgsave ) THEN CALL iom_put( "PDLIMFE3" , pdlimfe3 ) DEALLOCATE( pdlimfe3 ) ENDIF IF( med_diag%PDLIMSI3%dgsave ) THEN CALL iom_put( "PDLIMSI3" , pdlimsi3 ) DEALLOCATE( pdlimsi3 ) ENDIF # endif DEALLOCATE( zw2d ) END SUBROUTINE bio_medusa_fin #else !!====================================================================== !! Dummy module : No MEDUSA bio-model !!====================================================================== CONTAINS SUBROUTINE bio_medusa_fin( ) ! Empty routine WRITE(*,*) 'bio_medusa_fin: You should not have seen this print! error?' END SUBROUTINE bio_medusa_fin #endif !!====================================================================== END MODULE bio_medusa_fin_mod