MODULE bio_medusa_diag_slice_mod !!====================================================================== !! *** MODULE bio_medusa_diag_slice_mod *** !! Diagnostic calculations at different levels !!====================================================================== !! History : !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 !!---------------------------------------------------------------------- #if defined key_medusa !!---------------------------------------------------------------------- !! MEDUSA bio-model !!---------------------------------------------------------------------- IMPLICIT NONE PRIVATE PUBLIC bio_medusa_diag_slice ! Called in trcbio_medusa.F90 !!---------------------------------------------------------------------- !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) !! $Id$ !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) !!---------------------------------------------------------------------- CONTAINS SUBROUTINE bio_medusa_diag_slice( jk ) !!--------------------------------------------------------------------- !! *** ROUTINE bio_medusa_diag_slice *** !! This called from TRC_BIO_MEDUSA and !! - ... !!---------------------------------------------------------------------- USE bio_medusa_mod USE par_medusa, ONLY: jpchd, jpchn USE dom_oce, ONLY: tmask USE in_out_manager, ONLY: lwp, numout # if defined key_iomput USE iom, ONLY: iom_put # endif USE lbclnk, ONLY: lbc_lnk USE oce, ONLY: CO2Flux_out_cpl, DMS_out_cpl USE par_oce, ONLY: jpi, jpj USE sbc_oce, ONLY: lk_oasis, qsr, wndm USE sms_medusa, ONLY: i0100, i0150, i0200, i0500, i1000, & f2_ccd_arg, f2_ccd_cal, & f3_co3, f3_h2co3, f3_hco3, f3_pH, & jdms, ocal_ccd, xpar, xze, & zb_co2_flx, zb_dms_srf, & zn_co2_flx, zn_dms_srf USE trc, ONLY: med_diag !! The vertical level INTEGER, INTENT( in ) :: jk !!---------------------------------------------------------------------- !!----------------------------------------- !! !! 2d specific k level diags !! !!----------------------------------------- # if defined key_debug_medusa IF (lwp) write (numout,*) 'bio_medusa_diag_slice: start jk = ', jk CALL flush(numout) # endif !! IF (jk.eq.1) THEN IF( med_diag%MED_QSR%dgsave ) THEN CALL iom_put( "MED_QSR" , qsr ) ! ENDIF IF( med_diag%MED_XPAR%dgsave ) THEN CALL iom_put( "MED_XPAR" , xpar(:,:,jk) ) ! ENDIF IF( med_diag%OCAL_CCD%dgsave ) THEN CALL iom_put( "OCAL_CCD" , ocal_ccd ) ! ENDIF IF( med_diag%FE_0000%dgsave ) THEN CALL iom_put( "FE_0000" , xFree ) ! ENDIF IF( med_diag%MED_XZE%dgsave ) THEN CALL iom_put( "MED_XZE" , xze ) ! ENDIF # if defined key_roam IF( med_diag%WIND%dgsave ) THEN CALL iom_put( "WIND" , wndm ) ENDIF IF( med_diag%ATM_PCO2%dgsave ) THEN CALL iom_put( "ATM_PCO2" , f_pco2a2d ) DEALLOCATE( f_pco2a2d ) ENDIF IF( med_diag%OCN_PH%dgsave ) THEN zw2d(:,:) = f3_pH(:,:,jk) CALL iom_put( "OCN_PH" , zw2d ) ENDIF IF( med_diag%OCN_PCO2%dgsave ) THEN CALL iom_put( "OCN_PCO2" , f_pco2w2d ) DEALLOCATE( f_pco2w2d ) ENDIF IF( med_diag%OCNH2CO3%dgsave ) THEN zw2d(:,:) = f3_h2co3(:,:,jk) CALL iom_put( "OCNH2CO3" , zw2d ) ENDIF IF( med_diag%OCN_HCO3%dgsave ) THEN zw2d(:,:) = f3_hco3(:,:,jk) CALL iom_put( "OCN_HCO3" , zw2d ) ENDIF IF( med_diag%OCN_CO3%dgsave ) THEN zw2d(:,:) = f3_co3(:,:,jk) CALL iom_put( "OCN_CO3" , zw2d ) ENDIF IF( med_diag%CO2FLUX%dgsave ) THEN CALL iom_put( "CO2FLUX" , f_co2flux2d ) DEALLOCATE( f_co2flux2d ) ENDIF !! !! AXY (10/11/16): repeat CO2 flux diagnostic in UKMO/CMIP6 units; !! this both outputs the CO2 flux in specified units !! and sends the resulting field to the coupler !! JPALM (17/11/16): put CO2 flux (fgco2) alloc/unalloc/pass to zn !! out of diag list request CALL lbc_lnk( fgco2(:,:),'T',1. ) IF( med_diag%FGCO2%dgsave ) THEN CALL iom_put( "FGCO2" , fgco2 ) ENDIF !! JPALM (17/11/16): should mv this fgco2 part !! out of lk_iomput loop zb_co2_flx = zn_co2_flx zn_co2_flx = fgco2 IF (lk_oasis) THEN CO2Flux_out_cpl = zn_co2_flx ENDIF DEALLOCATE( fgco2 ) !! --- IF( med_diag%OM_CAL%dgsave ) THEN CALL iom_put( "OM_CAL" , f_omcal ) ENDIF IF( med_diag%OM_ARG%dgsave ) THEN CALL iom_put( "OM_ARG" , f_omarg ) ENDIF IF( med_diag%TCO2%dgsave ) THEN CALL iom_put( "TCO2" , f_TDIC2d ) DEALLOCATE( f_TDIC2d ) ENDIF IF( med_diag%TALK%dgsave ) THEN CALL iom_put( "TALK" , f_TALK2d ) DEALLOCATE( f_TALK2d ) ENDIF IF( med_diag%KW660%dgsave ) THEN CALL iom_put( "KW660" , f_kw6602d ) DEALLOCATE( f_kw6602d ) ENDIF IF( med_diag%ATM_PP0%dgsave ) THEN CALL iom_put( "ATM_PP0" , f_pp02d ) DEALLOCATE( f_pp02d ) ENDIF IF( med_diag%O2FLUX%dgsave ) THEN CALL iom_put( "O2FLUX" , f_o2flux2d ) DEALLOCATE( f_o2flux2d ) ENDIF IF( med_diag%O2SAT%dgsave ) THEN CALL iom_put( "O2SAT" , f_o2sat2d ) DEALLOCATE( f_o2sat2d ) ENDIF IF( med_diag%CAL_CCD%dgsave ) THEN CALL iom_put( "CAL_CCD" , f2_ccd_cal ) ENDIF IF( med_diag%ARG_CCD%dgsave ) THEN CALL iom_put( "ARG_CCD" , f2_ccd_arg ) ENDIF IF (jdms .eq. 1) THEN IF( med_diag%DMS_SURF%dgsave ) THEN CALL lbc_lnk(dms_surf2d(:,:),'T',1. ) CALL iom_put( "DMS_SURF" , dms_surf2d ) zb_dms_srf = zn_dms_srf zn_dms_srf = dms_surf2d IF (lk_oasis) THEN DMS_out_cpl = zn_dms_srf ENDIF DEALLOCATE( dms_surf2d ) ENDIF IF( med_diag%DMS_ANDR%dgsave ) THEN CALL iom_put( "DMS_ANDR" , dms_andr2d ) DEALLOCATE( dms_andr2d ) ENDIF IF( med_diag%DMS_SIMO%dgsave ) THEN CALL iom_put( "DMS_SIMO" , dms_simo2d ) DEALLOCATE( dms_simo2d ) ENDIF IF( med_diag%DMS_ARAN%dgsave ) THEN CALL iom_put( "DMS_ARAN" , dms_aran2d ) DEALLOCATE( dms_aran2d ) ENDIF IF( med_diag%DMS_HALL%dgsave ) THEN CALL iom_put( "DMS_HALL" , dms_hall2d ) DEALLOCATE( dms_hall2d ) ENDIF IF( med_diag%DMS_ANDM%dgsave ) THEN CALL iom_put( "DMS_ANDM" , dms_andm2d ) DEALLOCATE( dms_andm2d ) ENDIF ENDIF !! AXY (24/11/16): extra MOCSY diagnostics IF( med_diag%ATM_XCO2%dgsave ) THEN CALL iom_put( "ATM_XCO2" , f_xco2a_2d ) DEALLOCATE( f_xco2a_2d ) ENDIF IF( med_diag%OCN_FCO2%dgsave ) THEN CALL iom_put( "OCN_FCO2" , f_fco2w_2d ) DEALLOCATE( f_fco2w_2d ) ENDIF IF( med_diag%ATM_FCO2%dgsave ) THEN CALL iom_put( "ATM_FCO2" , f_fco2a_2d ) DEALLOCATE( f_fco2a_2d ) ENDIF IF( med_diag%OCN_RHOSW%dgsave ) THEN CALL iom_put( "OCN_RHOSW" , f_ocnrhosw_2d ) DEALLOCATE( f_ocnrhosw_2d ) ENDIF IF( med_diag%OCN_SCHCO2%dgsave ) THEN CALL iom_put( "OCN_SCHCO2" , f_ocnschco2_2d ) DEALLOCATE( f_ocnschco2_2d ) ENDIF IF( med_diag%OCN_KWCO2%dgsave ) THEN CALL iom_put( "OCN_KWCO2" , f_ocnkwco2_2d ) DEALLOCATE( f_ocnkwco2_2d ) ENDIF IF( med_diag%OCN_K0%dgsave ) THEN CALL iom_put( "OCN_K0" , f_ocnk0_2d ) DEALLOCATE( f_ocnk0_2d ) ENDIF IF( med_diag%CO2STARAIR%dgsave ) THEN CALL iom_put( "CO2STARAIR" , f_co2starair_2d ) DEALLOCATE( f_co2starair_2d ) ENDIF IF( med_diag%OCN_DPCO2%dgsave ) THEN CALL iom_put( "OCN_DPCO2" , f_ocndpco2_2d ) DEALLOCATE( f_ocndpco2_2d ) ENDIF # endif ELSE IF (jk.eq.i0100) THEN IF( med_diag%SDT__100%dgsave ) THEN zw2d(:,:) = fslownflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDT__100" , zw2d ) ENDIF IF( med_diag%REG__100%dgsave ) THEN CALL iom_put( "REG__100" , fregen2d ) ENDIF IF( med_diag%FDT__100%dgsave ) THEN CALL iom_put( "FDT__100" , ffastn ) ENDIF IF( med_diag%RG__100F%dgsave ) THEN CALL iom_put( "RG__100F" , fregenfast ) ENDIF IF( med_diag%FDS__100%dgsave ) THEN CALL iom_put( "FDS__100" , ffastsi ) ENDIF IF( med_diag%RGS_100F%dgsave ) THEN CALL iom_put( "RGS_100F" , fregenfastsi ) ENDIF IF( med_diag%FE_0100%dgsave ) THEN CALL iom_put( "FE_0100" , xFree ) ENDIF # if defined key_roam IF( med_diag%RR_0100%dgsave ) THEN CALL iom_put( "RR_0100" , ffastca2d ) ENDIF IF( med_diag%SDC__100%dgsave ) THEN zw2d(:,:) = fslowcflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDC__100" , zw2d ) ENDIF IF( med_diag%epC100%dgsave ) THEN zw2d(:,:) = (fslowcflux + ffastc) * tmask(:,:,jk) CALL iom_put( "epC100" , zw2d ) ENDIF IF( med_diag%epCALC100%dgsave ) THEN CALL iom_put( "epCALC100" , ffastca ) ENDIF IF( med_diag%epN100%dgsave ) THEN zw2d(:,:) = (fslownflux + ffastn) * tmask(:,:,jk) CALL iom_put( "epN100" , zw2d ) ENDIF IF( med_diag%epSI100%dgsave ) THEN CALL iom_put( "epSI100" , ffastsi ) ENDIF # endif ELSE IF (jk.eq.i0200) THEN IF( med_diag%SDT__200%dgsave ) THEN zw2d(:,:) = fslownflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDT__200" , zw2d ) ENDIF IF( med_diag%REG__200%dgsave ) THEN CALL iom_put( "REG__200" , fregen2d ) ENDIF IF( med_diag%FDT__200%dgsave ) THEN CALL iom_put( "FDT__200" , ffastn ) ENDIF IF( med_diag%RG__200F%dgsave ) THEN CALL iom_put( "RG__200F" , fregenfast ) ENDIF IF( med_diag%FDS__200%dgsave ) THEN CALL iom_put( "FDS__200" , ffastsi ) ENDIF IF( med_diag%RGS_200F%dgsave ) THEN CALL iom_put( "RGS_200F" , fregenfastsi ) ENDIF IF( med_diag%FE_0200%dgsave ) THEN CALL iom_put( "FE_0200" , xFree ) ENDIF # if defined key_roam IF( med_diag%SDC__200%dgsave ) THEN zw2d(:,:) = fslowcflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDC__200" , zw2d ) ENDIF # endif ELSE IF (jk.eq.i0500) THEN IF( med_diag%SDT__500%dgsave ) THEN zw2d(:,:) = fslownflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDT__500" , zw2d ) ENDIF IF( med_diag%REG__500%dgsave ) THEN CALL iom_put( "REG__500" , fregen2d ) ENDIF IF( med_diag%FDT__500%dgsave ) THEN CALL iom_put( "FDT__500" , ffastn ) ENDIF IF( med_diag%RG__500F%dgsave ) THEN CALL iom_put( "RG__500F" , fregenfast ) ENDIF IF( med_diag%FDS__500%dgsave ) THEN CALL iom_put( "FDS__500" , ffastsi ) ENDIF IF( med_diag%RGS_500F%dgsave ) THEN CALL iom_put( "RGS_500F" , fregenfastsi ) ENDIF IF( med_diag%FE_0500%dgsave ) THEN CALL iom_put( "FE_0500" , xFree ) ENDIF # if defined key_roam IF( med_diag%RR_0500%dgsave ) THEN CALL iom_put( "RR_0500" , ffastca2d ) ENDIF IF( med_diag%SDC__500%dgsave ) THEN zw2d(:,:) = fslowcflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDC__500" , zw2d ) ENDIF # endif ELSE IF (jk.eq.i1000) THEN IF( med_diag%SDT_1000%dgsave ) THEN zw2d(:,:) = fslownflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDT_1000" , zw2d ) ENDIF IF( med_diag%REG_1000%dgsave ) THEN CALL iom_put( "REG_1000" , fregen2d ) ENDIF IF( med_diag%FDT_1000%dgsave ) THEN CALL iom_put( "FDT_1000" , ffastn ) ENDIF IF( med_diag%RG_1000F%dgsave ) THEN CALL iom_put( "RG_1000F" , fregenfast ) ENDIF IF( med_diag%FDS_1000%dgsave ) THEN CALL iom_put( "FDS_1000" , ffastsi ) ENDIF IF( med_diag%RGS1000F%dgsave ) THEN CALL iom_put( "RGS1000F" , fregenfastsi ) ENDIF IF( med_diag%FE_1000%dgsave ) THEN CALL iom_put( "FE_1000" , xFree ) ENDIF # if defined key_roam IF( med_diag%RR_1000%dgsave ) THEN CALL iom_put( "RR_1000" , ffastca2d ) DEALLOCATE( ffastca2d ) ENDIF IF( med_diag%SDC_1000%dgsave ) THEN zw2d(:,:) = fslowcflux(:,:) * tmask(:,:,jk) CALL iom_put( "SDC_1000" , zw2d ) ENDIF # endif ENDIF !! to do on every k loop : IF( med_diag%DETFLUX3%dgsave ) THEN !! detrital flux detflux3d(:,:,jk) = (fslownflux(:,:) + ffastn(:,:)) * tmask(:,:,jk) !CALL iom_put( "DETFLUX3" , ftot_n ) ENDIF # if defined key_roam IF( med_diag%EXPC3%dgsave ) THEN expc3(:,:,jk) = (fslowcflux(:,:) + ffastc(:,:)) * tmask(:,:,jk) ENDIF IF( med_diag%EXPN3%dgsave ) THEN expn3(:,:,jk) = (fslownflux(:,:) + ffastn(:,:)) * tmask(:,:,jk) ENDIF # endif # if defined key_debug_medusa IF (lwp) write (numout,*) 'bio_medusa_diag_slice: end jk = ', jk CALL flush(numout) # endif END SUBROUTINE bio_medusa_diag_slice #else !!====================================================================== !! Dummy module : No MEDUSA bio-model !!====================================================================== CONTAINS SUBROUTINE bio_medusa_diag_slice( ) ! Empty routine WRITE(*,*) 'bio_medusa_diag_slice: You should not have seen this print! error?' END SUBROUTINE bio_medusa_diag_slice #endif !!====================================================================== END MODULE bio_medusa_diag_slice_mod