#
# ChangeLog for NEMO/trunk/src
#
# Generated by Trac 1.0.1
# 2024-04-26T05:02:53+02:00

Tue, 29 Jan 2019 11:18:09 GMT acc [10603]
	* NEMO/trunk/src/SAS/stpctl.F90 (modified)

	Update SAS/stpctl.F90 with missing controls over run.stat etc.


Mon, 28 Jan 2019 20:53:01 GMT acc [10601]
	* NEMO/trunk/doc/latex/NEMO/subfiles/chap_misc.tex (modified)
	* NEMO/trunk/doc/namelists/namctl (modified)
	* NEMO/trunk/src/OCE/IOM/in_out_manager.F90 (modified)
	* NEMO/trunk/src/OFF/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAO/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAS/nemogcm.F90 (modified)

	Remove some redundant variables from in_out_manager.F90. Update
	namctl ...


Mon, 28 Jan 2019 12:01:54 GMT clem [10589]
	* NEMO/trunk/src/ICE/icevar.F90 (modified)

	fix bug #2219


Mon, 28 Jan 2019 11:50:41 GMT jchanut [10588]
	* NEMO/trunk/src/OCE/IOM/in_out_manager.F90 (modified)
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)

	Remove some extra spaces that (weirdly) break AGRIF code conversion


Fri, 25 Jan 2019 15:18:45 GMT clem [10583]
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)

	just add the signature on the drawing in nemogcm


Fri, 25 Jan 2019 14:11:18 GMT smasson [10582]
	* NEMO/trunk/src/OCE/SBC/cpl_oasis3.F90 (modified)

	trunk: forget dummy routine for [10577]


Fri, 25 Jan 2019 12:45:45 GMT clem [10581]
	* NEMO/trunk/src/ICE/icectl.F90 (modified)

	add a comment


Fri, 25 Jan 2019 11:09:26 GMT clem [10579]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	change an option in the advection scheme to avoid weird ice
	temperature ...


Fri, 25 Jan 2019 10:07:04 GMT smasson [10577]
	* NEMO/trunk/doc/rst/source/coupling.rst (modified)
	* NEMO/trunk/src/OCE/SBC/cpl_oasis3.F90 (modified)

	trunk: minor update related to oasis version


Fri, 25 Jan 2019 08:55:09 GMT clem [10576]
	* NEMO/trunk/src/ICE/icectl.F90 (modified)

	remove the test in icea heat fluxes since I am unsure of the
	formulation


Thu, 24 Jan 2019 15:14:49 GMT acc [10570]
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/src/OCE/ICB/icbdia.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbdyn.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbini.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icblbc.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbstp.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbutl.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/in_out_manager.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/mppini.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcfwb.F90 (modified)
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)
	* NEMO/trunk/src/OCE/stpctl.F90 (modified)
	* NEMO/trunk/src/OFF/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAO/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAS/nemogcm.F90 (modified)
	* NEMO/trunk/src/TOP/prtctl_trc.F90 (modified)
	* NEMO/trunk/src/TOP/trcini.F90 (modified)
	* NEMO/trunk/src/TOP/trcstp.F90 (modified)

	Trunk update to implement finer control over the choice of text
	report ...


Wed, 23 Jan 2019 22:46:34 GMT clem [10564]
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)

	correct a bug in sea-ice heat flux


Wed, 23 Jan 2019 14:37:31 GMT smasson [10560]
	* NEMO/trunk/src/OCE/LBC/mppini.F90 (modified)

	trunk: bugfix in mppini for automatic domain decomposition with low ...


Tue, 22 Jan 2019 11:36:01 GMT clem [10555]
	* NEMO/trunk/src/ICE/icedyn_rhg_evp.F90 (modified)
	* NEMO/trunk/src/ICE/icevar.F90 (modified)

	choose to update ice velocity every sub-iteration in rheology or not ...


Fri, 18 Jan 2019 15:35:04 GMT cetlod [10549]
	* NEMO/trunk/src/TOP/README.rst (modified)

	minor updates of TOP user guide


Thu, 17 Jan 2019 15:57:40 GMT smasson [10542]
	* NEMO/trunk/src/OCE/LBC/mpp_bdy_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mpp_lnk_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mppini.F90 (modified)

	trunk: improve NP folding balance, see #2214


Thu, 17 Jan 2019 10:41:10 GMT clem [10538]
	* NEMO/trunk/src/ICE/icectl.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)

	increase the max number of communications (needed when using bdy
	which ...


Wed, 16 Jan 2019 20:41:21 GMT smasson [10537]
	* NEMO/trunk/src/OCE/BDY/bdyini.F90 (modified)

	trunk: bugfix in bdyini, see #2213


Wed, 16 Jan 2019 19:21:09 GMT mathiot [10536]
	* NEMO/trunk/src/OCE/SBC/sbcisf.F90 (modified)

	Fix #2178


Wed, 16 Jan 2019 17:36:47 GMT clem [10535]
	* NEMO/trunk/cfgs/AGRIF_DEMO/EXPREF/1_namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/EXPREF/2_namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/EXPREF/3_namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/ORCA2_SAS_ICE/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ice_ref (modified)
	* NEMO/trunk/cfgs/SPITZ12/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/icealb.F90 (modified)
	* NEMO/trunk/src/ICE/icesbc.F90 (moved)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)
	* NEMO/trunk/tests/ICE_ADV1D/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/tests/ICE_ADV2D/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/tests/ICE_AGRIF/EXPREF/1_namelist_ice_cfg (modified)
	* NEMO/trunk/tests/ICE_AGRIF/EXPREF/namelist_ice_cfg (modified)

	change some names again in the ice (last ones)


Wed, 16 Jan 2019 16:49:45 GMT clem [10534]
	* NEMO/trunk/cfgs/SHARED/namelist_ice_ref (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/ice1d.F90 (modified)
	* NEMO/trunk/src/ICE/iceforcing.F90 (modified)
	* NEMO/trunk/src/ICE/iceistate.F90 (modified)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)
	* NEMO/trunk/src/ICE/icethd.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_dh.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_zdf.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_zdf_bl99.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbccpl.F90 (modified)

	change some more names in the ice


Wed, 16 Jan 2019 13:39:38 GMT clem [10532]
	* NEMO/trunk/cfgs/SHARED/namelist_ice_ref (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_pnd.F90 (modified)

	remove ln_pnd_fwb from the ice code


Wed, 16 Jan 2019 13:17:50 GMT clem [10531]
	* NEMO/trunk/cfgs/SHARED/namelist_ice_ref (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rdgrft.F90 (modified)
	* NEMO/trunk/src/ICE/iceforcing.F90 (modified)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)
	* NEMO/trunk/src/ICE/icethd.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_zdf_bl99.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)

	remove nn_virtual_itd options and replace them by ln_virtual_itd


Wed, 16 Jan 2019 10:40:44 GMT smasson [10529]
	* NEMO/trunk/src/OCE/BDY/bdydta.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdydyn2d.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdydyn3d.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdylib.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdytra.F90 (modified)

	trunk: bugfix in BDY routines for non-MPP compilation, see #2211


Wed, 16 Jan 2019 10:25:41 GMT smasson [10528]
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)

	trunk: bugfix in lib_mpp for non-MPP compilation, see #2210


Wed, 16 Jan 2019 10:15:42 GMT clem [10527]
	* NEMO/trunk/src/ICE/iceistate.F90 (modified)

	should solve ticket #2134


Wed, 16 Jan 2019 10:14:10 GMT smasson [10526]
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)

	trunk: introduce key_mpi2 for some old fashioned guys..., see #2203


Wed, 16 Jan 2019 10:12:04 GMT smasson [10525]
	* NEMO/trunk/src/OCE/LBC/lbc_nfd_ext_generic.h90 (modified)

	trunk: again, compilation bugfix in lbc_nfd_ext_generic.h90 (line too ...


Wed, 16 Jan 2019 09:56:05 GMT smasson [10524]
	* NEMO/trunk/src/OCE/LBC/lbc_nfd_ext_generic.h90 (modified)

	trunk: compilation bugfix in lbc_nfd_ext_generic.h90 (for some ...


Wed, 16 Jan 2019 09:36:03 GMT smasson [10523]
	* NEMO/trunk/src/OCE/IOM/iom.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcrnf.F90 (modified)

	trunk: avoid the allocation of potentialy large array in sbcrnf, see ...


Wed, 16 Jan 2019 08:35:15 GMT smasson [10522]
	* NEMO/trunk/src/OCE/IOM/iom.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/iom_nf90.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcrnf.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zopt.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)

	trunk: replace iom_gettime by iom_getszuld, see #2212


Wed, 16 Jan 2019 07:58:14 GMT smasson [10521]
	* NEMO/trunk/src/OCE/IOM/iom_nf90.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)

	trunk: bugfix for compilation with (at least) gcc, see #2201


Tue, 15 Jan 2019 17:41:40 GMT clem [10519]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)

	solve a compilation issue with agrif. It looks like agrif does not
	like ...


Tue, 15 Jan 2019 17:06:06 GMT clem [10518]
	* NEMO/trunk/src/OCE/BDY/bdydyn2d.F90 (modified)

	solve ticket #1997 as proposed


Mon, 14 Jan 2019 18:53:17 GMT clem [10512]
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	change the default options for ice advection


Mon, 14 Jan 2019 18:21:49 GMT clem [10511]
	* NEMO/trunk/src/ICE/icedyn_rdgrft.F90 (modified)
	* NEMO/trunk/src/ICE/icethd.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)

	solve crash issue when using lupkes2015 for the drags (see ticket
	#2136)


Mon, 14 Jan 2019 16:13:17 GMT clem [10510]
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)
	* NEMO/trunk/src/OCE/timing.F90 (modified)

	a bit of casualness


Thu, 10 Jan 2019 15:12:24 GMT deazer [10499]
	* NEMO/trunk (modified)
	* NEMO/trunk/cfgs/SHARED (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/doc (modified)
	* NEMO/trunk/doc/latex/NEMO/main/NEMO_manual.bib (modified)
	* NEMO/trunk/doc/latex/NEMO/subfiles/chap_DYN.tex (modified)
	* NEMO/trunk/doc/namelists/namwad (modified)
	* NEMO/trunk/src (modified)
	* NEMO/trunk/src/OCE/DIA/dia25h.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diatmb.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/istate.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/wet_dry.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcmod.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trasbc.F90 (modified)
	* NEMO/trunk/tests (modified)
	* NEMO/trunk/tests/WAD/MY_DOCS/Namelists/nam_wad (modified)
	* NEMO/trunk/tests/WAD/MY_DOCS/WAD_doc.pdf (modified)
	* NEMO/trunk/tests/WAD/MY_DOCS/WAD_doc.tex (modified)
	* NEMO/trunk/tests/WAD/MY_DOCS/references.bib (modified)

	Fix ticket #2154


Wed, 09 Jan 2019 19:53:37 GMT mathiot [10491]
	* NEMO/trunk/src/OCE/DYN/dynhpg.F90 (modified)
	* NEMO/trunk/tests/ISOMIP/MY_SRC/usrdef_zgr.F90 (modified)

	Minor changes in isf load computation to fit change in DOMAINcfg


Wed, 09 Jan 2019 16:31:56 GMT mathiot [10481]
	* NEMO/trunk (modified)
	* NEMO/trunk/doc (modified)
	* NEMO/trunk/doc/latex/NEMO/subfiles/chap_LBC.tex (modified)
	* NEMO/trunk/src (modified)
	* NEMO/trunk/src/OCE/BDY/bdyini.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdyvol.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynspg_ts.F90 (modified)

	fix ticket #2200


Tue, 08 Jan 2019 18:00:51 GMT clem [10475]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	some light cleaning


Mon, 07 Jan 2019 15:29:28 GMT nicolasmartin [10460]
	* NEMO/trunk/CONTRIBUTING.rst (added)
	* NEMO/trunk/README.rst (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/README.rst (modified)
	* NEMO/trunk/cfgs/README.rst (modified)
	* NEMO/trunk/cfgs/SHARED/README.rst (modified)
	* NEMO/trunk/doc/rst/source/NEMO_guide.rst (modified)
	* NEMO/trunk/doc/rst/source/conf.py (modified)
	* NEMO/trunk/doc/rst/source/coupling.rst (modified)
	* NEMO/trunk/doc/rst/source/data_assimilation.rst (moved)
	* NEMO/trunk/doc/rst/source/interfacing_options.rst (deleted)
	* NEMO/trunk/src/OCE/USR/README.rst (deleted)
	* NEMO/trunk/src/TOP/README.rst (modified)

	Small modifications regarding README(s) and ReST files


Mon, 07 Jan 2019 11:43:49 GMT mathiot [10459]
	* NEMO/trunk/src/SAS/nemogcm.F90 (modified)

	add ctl_opn for numnul in SAS/nemogcm


Mon, 07 Jan 2019 11:19:17 GMT mathiot [10457]
	* NEMO/trunk/src/OFF/nemogcm.F90 (modified)

	add ctl_opn for numnul in OFF/nemogcm


Fri, 21 Dec 2018 15:07:19 GMT clem [10446]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	clean the routine icedyn_adv_umx


Fri, 21 Dec 2018 11:38:47 GMT smasson [10440]
	* NEMO/trunk/src/OCE/LBC/mpp_nfd_generic.h90 (modified)

	trunk: get back ORCA2 AGRIF vs ORCA2 NOAGRIF working


Fri, 21 Dec 2018 11:18:00 GMT clem [10439]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	debug zalesak prelimiter in ice advection


Fri, 21 Dec 2018 10:18:36 GMT smasson [10437]
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)

	trunk: improve communication_report.txt for delayed global comm


Fri, 21 Dec 2018 08:21:40 GMT smasson [10436]
	* NEMO/trunk/src/OCE/LBC/mpp_nfd_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mppini.F90 (modified)
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)

	trunk: bugfix in land-processor detection and minor cleanning


Thu, 20 Dec 2018 08:12:57 GMT smasson [10428]
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)
	* NEMO/trunk/tests/BENCH/MY_SRC/usrdef_nam.F90 (modified)

	trunk: suppress jpnij from the namelist (already defined by mppsize)


Wed, 19 Dec 2018 21:54:16 GMT smasson [10425]
	* NEMO/trunk (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/cpp_AGRIF_DEMO.fcm (modified)
	* NEMO/trunk/cfgs/ORCA2_ICE_PISCES/cpp_ORCA2_ICE_PISCES.fcm (modified)
	* NEMO/trunk/cfgs/SHARED (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/cfgs/SPITZ12/cpp_SPITZ12.fcm (modified)
	* NEMO/trunk/doc (modified)
	* NEMO/trunk/src (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/ice1d.F90 (modified)
	* NEMO/trunk/src/ICE/icecor.F90 (modified)
	* NEMO/trunk/src/ICE/icectl.F90 (modified)
	* NEMO/trunk/src/ICE/icedia.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_adv_pra.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rdgrft.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rhg_evp.F90 (modified)
	* NEMO/trunk/src/ICE/iceforcing.F90 (modified)
	* NEMO/trunk/src/ICE/iceistate.F90 (modified)
	* NEMO/trunk/src/ICE/icerst.F90 (modified)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)
	* NEMO/trunk/src/ICE/icethd.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_do.F90 (modified)
	* NEMO/trunk/src/ICE/icethd_zdf_bl99.F90 (modified)
	* NEMO/trunk/src/ICE/iceupdate.F90 (modified)
	* NEMO/trunk/src/ICE/icewri.F90 (modified)
	* NEMO/trunk/src/NST/agrif_oce.F90 (modified)
	* NEMO/trunk/src/NST/agrif_oce_sponge.F90 (modified)
	* NEMO/trunk/src/NST/agrif_user.F90 (modified)
	* NEMO/trunk/src/OCE/ASM/asmbkg.F90 (modified)
	* NEMO/trunk/src/OCE/ASM/asminc.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdy_oce.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdydyn2d.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdydyn3d.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdyice.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdyini.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdytra.F90 (modified)
	* NEMO/trunk/src/OCE/BDY/bdyvol.F90 (modified)
	* NEMO/trunk/src/OCE/C1D/dyndmp.F90 (modified)
	* NEMO/trunk/src/OCE/CRS/crsdomwri.F90 (modified)
	* NEMO/trunk/src/OCE/CRS/crsfld.F90 (modified)
	* NEMO/trunk/src/OCE/CRS/crslbclnk.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diaar5.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diacfl.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diadct.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diaharm.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diahsb.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diahth.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diaptr.F90 (modified)
	* NEMO/trunk/src/OCE/DIA/diawri.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/closea.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/domain.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/dommsk.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/domngb.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/domvvl.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/domwri.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/domzgr.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/iscplhsb.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/iscplini.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/iscplrst.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/divhor.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynadv_ubs.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynhpg.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynkeg.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynldf_iso.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynldf_lap_blp.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynnxt.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynspg_ts.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/dynvor.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/sshwzv.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/wet_dry.F90 (modified)
	* NEMO/trunk/src/OCE/FLO/flo_oce.F90 (modified)
	* NEMO/trunk/src/OCE/FLO/floblk.F90 (modified)
	* NEMO/trunk/src/OCE/FLO/flodom.F90 (modified)
	* NEMO/trunk/src/OCE/FLO/florst.F90 (modified)
	* NEMO/trunk/src/OCE/FLO/flowri.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icb_oce.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbclv.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbdia.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbini.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icblbc.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbrst.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbutl.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/in_out_manager.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/iom.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/iom_def.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/iom_nf90.F90 (modified)
	* NEMO/trunk/src/OCE/IOM/restart.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbc_lnk_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbc_lnk_multi_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbc_nfd_ext_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbc_nfd_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbc_nfd_nogather_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbclnk.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/lbcnfd.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/lib_mpp.F90 (modified)
	* NEMO/trunk/src/OCE/LBC/mpp_allreduce_generic.h90 (copied)
	* NEMO/trunk/src/OCE/LBC/mpp_bdy_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mpp_lnk_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mpp_loc_generic.h90 (copied)
	* NEMO/trunk/src/OCE/LBC/mpp_nfd_generic.h90 (modified)
	* NEMO/trunk/src/OCE/LBC/mppini.F90 (modified)
	* NEMO/trunk/src/OCE/LDF/ldfc1d_c2d.F90 (modified)
	* NEMO/trunk/src/OCE/LDF/ldfdyn.F90 (modified)
	* NEMO/trunk/src/OCE/LDF/ldfslp.F90 (modified)
	* NEMO/trunk/src/OCE/LDF/ldftra.F90 (modified)
	* NEMO/trunk/src/OCE/OBS/obs_averg_h2d.F90 (modified)
	* NEMO/trunk/src/OCE/OBS/obs_readmdt.F90 (modified)
	* NEMO/trunk/src/OCE/OBS/obs_write.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/cpl_oasis3.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/fldread.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/geo2ocean.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbc_ice.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbc_oce.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcapr.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbccpl.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcdcy.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcflx.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcfwb.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcice_cice.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcisf.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcmod.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcrnf.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcssm.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcwave.F90 (modified)
	* NEMO/trunk/src/OCE/STO/stopar.F90 (modified)
	* NEMO/trunk/src/OCE/STO/stopts.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/eosbn2.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traadv_cen.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traadv_fct.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traadv_mus.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traadv_qck.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traadv_ubs.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trabbc.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trabbl.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/tradmp.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traldf_lap_blp.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traldf_triad.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/tramle.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/tranpc.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/tranxt.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/traqsr.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trazdf.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/zpshde.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trddyn.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdglo.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdken.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdmxl.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdmxl_oce.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdmxl_rst.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdpen.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdtra.F90 (modified)
	* NEMO/trunk/src/OCE/TRD/trdvor.F90 (modified)
	* NEMO/trunk/src/OCE/USR/usrdef_fmask.F90 (modified)
	* NEMO/trunk/src/OCE/USR/usrdef_sbc.F90 (modified)
	* NEMO/trunk/src/OCE/USR/usrdef_zgr.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdf_oce.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfgls.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfiwm.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfmxl.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfosm.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfphy.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdftke.F90 (modified)
	* NEMO/trunk/src/OCE/lib_fortran.F90 (modified)
	* NEMO/trunk/src/OCE/lib_fortran_generic.h90 (copied)
	* NEMO/trunk/src/OCE/module_example (modified)
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)
	* NEMO/trunk/src/OCE/oce.F90 (modified)
	* NEMO/trunk/src/OCE/stpctl.F90 (modified)
	* NEMO/trunk/src/OCE/timing.F90 (modified)
	* NEMO/trunk/src/OFF/dtadyn.F90 (modified)
	* NEMO/trunk/src/OFF/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAO/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAS/diawri.F90 (modified)
	* NEMO/trunk/src/SAS/nemogcm.F90 (modified)
	* NEMO/trunk/src/SAS/step.F90 (modified)
	* NEMO/trunk/src/SAS/stpctl.F90 (modified)
	* NEMO/trunk/src/TOP/C14/trcwri_c14.F90 (modified)
	* NEMO/trunk/src/TOP/CFC/trcsms_cfc.F90 (modified)
	* NEMO/trunk/src/TOP/MY_TRC/trcsms_my_trc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P2Z/p2zbio.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P2Z/p2zexp.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zche.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zflx.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zlim.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zopt.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zrem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsink.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zlim.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sed_oce.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedadv.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedrst.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/sms_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcini_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trcnxt.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trcrad.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trcsbc.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trdmxl_trc.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trdmxl_trc_rst.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trdtrc_oce.F90 (modified)
	* NEMO/trunk/src/TOP/trc.F90 (modified)
	* NEMO/trunk/src/TOP/trcbdy.F90 (modified)
	* NEMO/trunk/src/TOP/trcini.F90 (modified)
	* NEMO/trunk/src/TOP/trcnam.F90 (modified)
	* NEMO/trunk/src/TOP/trcrst.F90 (modified)
	* NEMO/trunk/src/TOP/trcstp.F90 (modified)
	* NEMO/trunk/src/TOP/trcsub.F90 (modified)
	* NEMO/trunk/tests (modified)
	* NEMO/trunk/tests/BENCH (copied)
	* NEMO/trunk/tests/CANAL/MY_SRC/diawri.F90 (modified)
	* NEMO/trunk/tests/CANAL/MY_SRC/domvvl.F90 (modified)
	* NEMO/trunk/tests/CANAL/MY_SRC/stpctl.F90 (modified)
	* NEMO/trunk/tests/CANAL/MY_SRC/trazdf.F90 (modified)
	* NEMO/trunk/tests/CANAL/MY_SRC/usrdef_istate.F90 (modified)
	* NEMO/trunk/tests/CANAL/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/CANAL/cpp_CANAL.fcm (modified)
	* NEMO/trunk/tests/ICEDYN/cpp_ICEDYN.fcm (modified)
	* NEMO/trunk/tests/ISOMIP/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/ISOMIP/cpp_ISOMIP.fcm (modified)
	* NEMO/trunk/tests/LOCK_EXCHANGE/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/LOCK_EXCHANGE/cpp_LOCK_EXCHANGE.fcm (modified)
	* NEMO/trunk/tests/OVERFLOW/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/OVERFLOW/cpp_OVERFLOW.fcm (modified)
	* NEMO/trunk/tests/VORTEX/MY_SRC/domvvl.F90 (modified)
	* NEMO/trunk/tests/VORTEX/MY_SRC/usrdef_istate.F90 (modified)
	* NEMO/trunk/tests/VORTEX/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/VORTEX/cpp_VORTEX.fcm (modified)
	* NEMO/trunk/tests/WAD/MY_SRC/bdyini.F90 (modified)
	* NEMO/trunk/tests/WAD/MY_SRC/usrdef_zgr.F90 (modified)
	* NEMO/trunk/tests/WAD/cpp_WAD.fcm (modified)
	* NEMO/trunk/tests/demo_cfgs.txt (modified)

	trunk: merge back dev_r10164_HPC09_ESIWACE_PREP_MERGE@10424 into the ...


Wed, 19 Dec 2018 14:18:03 GMT clem [10418]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	cosmetic changes


Wed, 19 Dec 2018 11:45:43 GMT aumont [10416]
	* NEMO/trunk/cfgs/SHARED/field_def_nemo-pisces.xml (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_pisces_ref (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zfechem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zligand.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsink.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/par_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/sms_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcini_pisces.F90 (modified)

	Remove LFe from standard PISCES code


Wed, 19 Dec 2018 11:28:25 GMT clem [10415]
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/icectl.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rhg_evp.F90 (modified)
	* NEMO/trunk/src/ICE/icestp.F90 (modified)
	* NEMO/trunk/src/ICE/icevar.F90 (modified)
	* NEMO/trunk/src/OCE/stpctl.F90 (modified)

	correct the advection for ice ponds, make a couple of cosmetic
	changes ...


Tue, 18 Dec 2018 17:59:59 GMT clem [10413]
	* NEMO/trunk/cfgs/SHARED/field_def_nemo-ice.xml (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ice_ref (modified)
	* NEMO/trunk/cfgs/SPITZ12/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/src/ICE/ice.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_adv.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rdgrft.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rhg.F90 (modified)
	* NEMO/trunk/src/ICE/icedyn_rhg_evp.F90 (modified)
	* NEMO/trunk/src/ICE/iceistate.F90 (modified)
	* NEMO/trunk/src/ICE/icevar.F90 (modified)
	* NEMO/trunk/src/ICE/icewri.F90 (modified)
	* NEMO/trunk/src/NST/agrif_oce.F90 (modified)
	* NEMO/trunk/tests/ICEADV (added)
	* NEMO/trunk/tests/ICEADV/EXPREF (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/context_nemo.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/domain_def_nemo.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/field_def_nemo-ice.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/field_def_nemo-oce.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/file_def_nemo-ice.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/file_def_nemo-oce.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/grid_def_nemo.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/iodef.xml (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/make_initice.py (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_cfg (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_cfg_120pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_cfg_240pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_cfg_60pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ice_cfg (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ice_cfg_120pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ice_cfg_240pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ice_cfg_60pts (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ice_ref (added)
	* NEMO/trunk/tests/ICEADV/EXPREF/namelist_ref (added)
	* NEMO/trunk/tests/ICEADV/MY_SRC (added)
	* NEMO/trunk/tests/ICEADV/MY_SRC/usrdef_hgr.F90 (added)
	* NEMO/trunk/tests/ICEADV/MY_SRC/usrdef_nam.F90 (added)
	* NEMO/trunk/tests/ICEADV/MY_SRC/usrdef_sbc.F90 (added)
	* NEMO/trunk/tests/ICEADV/MY_SRC/usrdef_zgr.F90 (added)
	* NEMO/trunk/tests/ICEADV/cpp_ICEADV.fcm (added)
	* NEMO/trunk/tests/ICEDYN/EXPREF/1_namelist_ice_cfg (modified)
	* NEMO/trunk/tests/ICEDYN/EXPREF/file_def_nemo-ice.xml (modified)
	* NEMO/trunk/tests/ICEDYN/EXPREF/namelist_ice_cfg (modified)
	* NEMO/trunk/tests/demo_cfgs.txt (modified)

	merge dev_r9947_SI3_advection with the trunk. All sette tests passed. ...


Tue, 18 Dec 2018 09:05:53 GMT smasson [10404]
	* NEMO/trunk/src/OCE/SBC/cpl_oasis3.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbccpl.F90 (modified)

	trunk: compatibility with oasis3-mct v4


Mon, 17 Dec 2018 15:57:34 GMT cetlod [10401]
	* NEMO/trunk/cfgs/SHARED/field_def_nemo-pisces.xml (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_pisces_ref (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zfechem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zprod.F90 (modified)

	Remove obsolescence in PISCES


Tue, 11 Dec 2018 22:06:10 GMT cetlod [10382]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)

	bugfix in p4zsms : initialization of t_oce_co2_flx_cum


Fri, 07 Dec 2018 20:19:02 GMT aumont [10376]
	* NEMO/trunk/src/TOP/TRP/trcsink.F90 (added)

	sedimentation of particles in TOP module


Fri, 07 Dec 2018 16:27:26 GMT aumont [10375]
	* NEMO/trunk/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_top_cfg (modified)
	* NEMO/trunk/cfgs/ORCA2_OFF_PISCES/EXPREF/namelist_top_cfg (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_pisces_ref (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_top_ref (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsink.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/sms_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/trcini.F90 (modified)

	Create generic routines for vertical sinking of particles


Thu, 06 Dec 2018 09:49:35 GMT cetlod [10374]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmicro.F90 (modified)

	Bugfix in PISCES : rename zz2ligprod to zzligprod in p4zmicro, see ...


Tue, 04 Dec 2018 10:37:31 GMT smasson [10370]
	* NEMO/trunk/src/OCE/SBC/geo2ocean.F90 (modified)

	trunk: get 03 optimisation working with AGRIF in angle


Mon, 03 Dec 2018 11:35:19 GMT cetlod [10367]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmeso.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmicro.F90 (modified)

	bugfix : frees space previously allocated in PISCES


Fri, 30 Nov 2018 17:42:51 GMT acc [10364]
	* NEMO/trunk/cfgs/SHARED/field_def_nemo-oce.xml (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/src/OCE/DYN/dynzdf.F90 (modified)
	* NEMO/trunk/src/OCE/DYN/sshwzv.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trazdf.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdf_oce.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfosm.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfphy.F90 (modified)
	* NEMO/trunk/src/OCE/oce.F90 (modified)
	* NEMO/trunk/src/OCE/step.F90 (modified)
	* NEMO/trunk/src/OCE/stpctl.F90 (modified)

	Introduce Adaptive-Implicit vertical advection option to the trunk.
	This ...


Fri, 30 Nov 2018 15:38:17 GMT aumont [10362]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zfechem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zligand.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmeso.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmicro.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zopt.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zpoc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zrem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsink.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zlim.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zmeso.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zmicro.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zmort.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/oce_sed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/seddsr.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/seddta.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedini.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/sms_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcini_pisces.F90 (modified)

	Various bug fixes and improvements


Fri, 30 Nov 2018 08:33:05 GMT davestorkey [10361]
	* NEMO/trunk/src/OCE/IOM/iom.F90 (modified)

	Bug fix for depth_bounds initialisation in iom_init. Ticket #2163.


Thu, 22 Nov 2018 11:39:19 GMT cetlod [10356]
	* NEMO/trunk/src/TOP/PISCES/SED/sedchem.F90 (modified)

	Bugfix in sediment model, see ticket #2171


Wed, 21 Nov 2018 17:31:21 GMT mathiot [10355]
	* NEMO/trunk/src/OCE/ASM/asminc.F90 (modified)

	Fix #2172


Wed, 21 Nov 2018 16:04:47 GMT mathiot [10353]
	* NEMO/trunk/src/OCE/OBS/obsinter_h2d.h90 (modified)

	remove WRITE of undefined value (weight) in case (jiter > itermax) in ...


Wed, 21 Nov 2018 14:19:04 GMT mathiot [10351]
	* NEMO/trunk/src/OCE/C1D/dyndmp.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/tradmp.F90 (modified)
	* NEMO/trunk/src/OCE/ZDF/zdfmxl.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trcdmp.F90 (modified)
	* NEMO/trunk/src/TOP/oce_trc.F90 (modified)

	fix #1685 (replace 5.e-4_wp by avt_c in dmp routine as it is computed
	in ...


Wed, 21 Nov 2018 14:12:15 GMT mathiot [10350]
	* NEMO/trunk/src/OCE/nemogcm.F90 (modified)

	fix #2169 (call to tra_bbl_init)


Wed, 21 Nov 2018 13:59:27 GMT jchanut [10349]
	* NEMO/trunk/src/OCE/DYN/dynnxt.F90 (modified)

	Fixes volume conservation with isf, #2168


Wed, 21 Nov 2018 07:30:01 GMT smasson [10344]
	* NEMO/trunk/src/ICE/icedyn_adv_umx.F90 (modified)

	trunk: avoid undefined (and harmless) values in icedyn_adv_umx to
	pass ...


Tue, 20 Nov 2018 13:18:06 GMT smasson [10342]
	* NEMO/trunk/src/OCE/ZDF/zdfgls.F90 (modified)

	trunk: avoid undefined (and harmless) values in gls to pass -fpe0
	test


Tue, 20 Nov 2018 07:31:58 GMT smasson [10341]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)

	trunk: minor bugfix in p4zsms, missing t_oce_co2_flx_cum
	initialization


Mon, 19 Nov 2018 13:22:44 GMT smasson [10333]
	* NEMO/trunk/src/TOP/PISCES/SED/seddta.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedini.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedrst.F90 (modified)

	trunk: bugfix: add missing use in sed routines


Mon, 19 Nov 2018 12:02:15 GMT mathiot [10332]
	* NEMO/trunk/src/ICE/icedyn_rhg_evp.F90 (modified)
	* NEMO/trunk/src/ICE/icevar.F90 (modified)
	* NEMO/trunk/src/OCE/ICB/icbutl.F90 (modified)

	Fix #2161


Wed, 07 Nov 2018 11:04:15 GMT nicolasmartin [10279]
	* NEMO/trunk/INSTALL.rst (modified)
	* NEMO/trunk/README.rst (modified)
	* NEMO/trunk/REFERENCES.bib (modified)
	* NEMO/trunk/RELEASE_NOTES.rst (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/README.rst (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/zooms.bib (modified)
	* NEMO/trunk/cfgs/README.rst (modified)
	* NEMO/trunk/cfgs/SHARED/README.rst (modified)
	* NEMO/trunk/doc/rst/source/NEMO_guide.rst (modified)
	* NEMO/trunk/doc/rst/source/_static/style.css (added)
	* NEMO/trunk/doc/rst/source/_templates/layout.html (added)
	* NEMO/trunk/doc/rst/source/assimilation.rst (moved)
	* NEMO/trunk/doc/rst/source/conf.py (modified)
	* NEMO/trunk/doc/rst/source/configurations.rst (moved)
	* NEMO/trunk/doc/rst/source/coupling.rst (modified)
	* NEMO/trunk/doc/rst/source/definitions.rst (modified)
	* NEMO/trunk/doc/rst/source/diagnostics.rst (moved)
	* NEMO/trunk/doc/rst/source/global.rst (moved)
	* NEMO/trunk/doc/rst/source/interfacing_options.rst (modified)
	* NEMO/trunk/doc/rst/source/setup.rst (added)
	* NEMO/trunk/doc/rst/source/setup_configuration.rst (deleted)
	* NEMO/trunk/src/OCE/CRS/README.rst (modified)
	* NEMO/trunk/src/TOP/README.rst (modified)
	* NEMO/trunk/tests/README.rst (modified)
	* utils/tools/README.rst (added)

	Various improvments for quick start guide
	- implementation of Rtd theme ...


Fri, 02 Nov 2018 11:15:39 GMT deazer [10272]
	* NEMO/trunk/src/OCE/DYN/dynspg_ts.F90 (modified)

	Bug fix for wd case with implicit bottom friction.
	(Currently only done ...


Tue, 30 Oct 2018 13:04:17 GMT mathiot [10256]
	* NEMO/trunk/src/OCE/DYN/dynspg_ts.F90 (modified)

	fix #2151


Mon, 29 Oct 2018 13:19:44 GMT mathiot [10250]
	* NEMO/trunk/src/TOP/PISCES/SED/sedmbc.F90 (modified)

	fix compilation error in PISCES


Fri, 26 Oct 2018 13:59:22 GMT smueller [10233]
	* NEMO/trunk/src/OCE/LBC/lbclnk.F90 (modified)

	Extension of non-MPP version of generic procedure lbc_bdy_lnk for use ...


Thu, 25 Oct 2018 15:07:09 GMT aumont [10228]
	* NEMO/trunk/src/TOP/PISCES/SED/p4zsed.F90 (deleted)

	removed p4zsed from SED


Thu, 25 Oct 2018 14:42:24 GMT aumont [10227]
	* NEMO/trunk/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_pisces_cfg (modified)
	* NEMO/trunk/cfgs/ORCA2_OFF_PISCES/EXPREF/namelist_pisces_cfg (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_pisces_ref (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zbio.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zice.F90 (deleted)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zlim.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmicro.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmort.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zrem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zice.F90 (deleted)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zlim.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zmicro.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zmort.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p5zprod.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcini_pisces.F90 (modified)

	rename p4zice and p5zice to their orginal names p4zlim and p5zlim. ...


Thu, 25 Oct 2018 12:25:31 GMT aumont [10225]
	* NEMO/trunk/src/TOP/PISCES/SED/oce_sed.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/p4zsed.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/sed_oce.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/seddiff.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/sedinitrc.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/sedinorg.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/sedorg.F90 (added)
	* NEMO/trunk/src/TOP/PISCES/SED/trcdmp_sed.F90 (added)

	new routines corresponding to the updated version of the sediment
	module


Thu, 25 Oct 2018 10:08:11 GMT aumont [10224]
	* NEMO/trunk/src/OCE/TRA/trazdf.F90 (modified)

	removed a debug line


Thu, 25 Oct 2018 10:05:18 GMT aumont [10223]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)

	changes to account for the new sediment module


Thu, 25 Oct 2018 09:42:23 GMT aumont [10222]
	* NEMO/trunk/src/OCE/IOM/iom.F90 (modified)
	* NEMO/trunk/src/OFF/dtadyn.F90 (modified)
	* NEMO/trunk/src/OFF/nemogcm.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zche.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zmeso.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zrem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/par_sed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sed.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedadv.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedarr.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedbtb.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedchem.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedco3.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/seddsr.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/seddta.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedini.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedmat.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedmbc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedmodel.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedrst.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedsfc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedstp.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/SED/sedwri.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/sms_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcini_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcnam_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/trc.F90 (modified)
	* NEMO/trunk/src/TOP/trcdta.F90 (modified)
	* NEMO/trunk/src/TOP/trcini.F90 (modified)
	* NEMO/trunk/src/TOP/trcrst.F90 (modified)

	update of the sediment module + enhancement, bug correction in PISCES ...


Tue, 23 Oct 2018 14:40:09 GMT aumont [10213]
	* NEMO/trunk/src/OCE/DOM/domvvl.F90 (modified)
	* NEMO/trunk/src/OCE/DOM/dtatsd.F90 (modified)
	* NEMO/trunk/src/OCE/TRA/trazdf.F90 (modified)
	* NEMO/trunk/src/OFF/dtadyn.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsms.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/trcice_pisces.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trcdmp.F90 (modified)

	corrects bugs described in Tickets 2144 and 2145


Thu, 18 Oct 2018 10:53:04 GMT nicolasmartin [10201]
	* NEMO/trunk/INSTALL.rst (modified)
	* NEMO/trunk/README.rst (modified)
	* NEMO/trunk/REFERENCES.bib (added)
	* NEMO/trunk/RELEASE_NOTES.rst (modified)
	* NEMO/trunk/cfgs/AGRIF_DEMO/README.rst (added)
	* NEMO/trunk/cfgs/AGRIF_DEMO/zooms.bib (added)
	* NEMO/trunk/cfgs/README.rst (copied)
	* NEMO/trunk/cfgs/SHARED/README.rst (added)
	* NEMO/trunk/doc/namelists/namage (added)
	* NEMO/trunk/doc/namelists/namalb (added)
	* NEMO/trunk/doc/namelists/namdia (added)
	* NEMO/trunk/doc/namelists/namdyn (added)
	* NEMO/trunk/doc/namelists/namdyn_rdgrft (added)
	* NEMO/trunk/doc/namelists/namdyn_rhg (added)
	* NEMO/trunk/doc/namelists/namforcing (added)
	* NEMO/trunk/doc/namelists/namini (added)
	* NEMO/trunk/doc/namelists/namitd (added)
	* NEMO/trunk/doc/namelists/nampar (added)
	* NEMO/trunk/doc/namelists/namthd (added)
	* NEMO/trunk/doc/namelists/namthd_da (added)
	* NEMO/trunk/doc/namelists/namthd_do (added)
	* NEMO/trunk/doc/namelists/namthd_pnd (added)
	* NEMO/trunk/doc/namelists/namthd_sal (added)
	* NEMO/trunk/doc/namelists/namthd_zdf (added)
	* NEMO/trunk/doc/namelists/namtrc (added)
	* NEMO/trunk/doc/namelists/namtrc_adv (added)
	* NEMO/trunk/doc/namelists/namtrc_bc (added)
	* NEMO/trunk/doc/namelists/namtrc_bdy (added)
	* NEMO/trunk/doc/namelists/namtrc_dmp (added)
	* NEMO/trunk/doc/namelists/namtrc_dta (added)
	* NEMO/trunk/doc/namelists/namtrc_ice (added)
	* NEMO/trunk/doc/namelists/namtrc_ldf (added)
	* NEMO/trunk/doc/namelists/namtrc_rad (added)
	* NEMO/trunk/doc/namelists/namtrc_run (added)
	* NEMO/trunk/doc/namelists/namtrc_trd (added)
	* NEMO/trunk/doc/rst/build (modified)
	* NEMO/trunk/doc/rst/source/.global.rst (added)
	* NEMO/trunk/doc/rst/source/NEMO_guide.rst (modified)
	* NEMO/trunk/doc/rst/source/_static/frames (added)
	* NEMO/trunk/doc/rst/source/_static/frames/VORTEX_anim-00.png (added)
	* NEMO/trunk/doc/rst/source/_static/frames/VORTEX_anim-01.png (added)
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	* NEMO/trunk/doc/rst/source/coarsening.rst (added)
	* NEMO/trunk/doc/rst/source/conf.py (modified)
	* NEMO/trunk/doc/rst/source/coupling.rst (added)
	* NEMO/trunk/doc/rst/source/data_assimilation.rst (added)
	* NEMO/trunk/doc/rst/source/definitions.rst (added)
	* NEMO/trunk/doc/rst/source/input-output.rst (added)
	* NEMO/trunk/doc/rst/source/interfacing_options.rst (modified)
	* NEMO/trunk/doc/rst/source/reference_configurations.rst (added)
	* NEMO/trunk/doc/rst/source/references.rst (deleted)
	* NEMO/trunk/doc/rst/source/setup_configuration.rst (added)
	* NEMO/trunk/doc/rst/source/test_cases.rst (added)
	* NEMO/trunk/doc/rst/source/tools.rst (added)
	* NEMO/trunk/doc/rst/source/tracers.rst (added)
	* NEMO/trunk/doc/rst/source/zooms.bib (added)
	* NEMO/trunk/doc/rst/source/zooms.rst (added)
	* NEMO/trunk/src/OCE/ASM/README.rst (added)
	* NEMO/trunk/src/OCE/CRS/README.rst (added)
	* NEMO/trunk/src/OCE/OBS/README.rst (added)
	* NEMO/trunk/src/OCE/SBC/README.rst (added)
	* NEMO/trunk/src/OCE/USR/README-setup-configs (moved)
	* NEMO/trunk/src/OCE/USR/README.rst (copied)
	* NEMO/trunk/src/SAS/README.rst (added)
	* NEMO/trunk/src/TOP/README.rst (added)
	* NEMO/trunk/tests/README.rst (copied)
	* NEMO/trunk/tests/test_cases.bib (added)

	Various modifications related to the setting of a NEMO Quick Start
	Guide ...


Fri, 12 Oct 2018 12:50:10 GMT lovato [10190]
	* NEMO/trunk/cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_cfg (modified)
	* NEMO/trunk/cfgs/SHARED/namelist_ref (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcblk_algo_ncar.F90 (modified)
	* NEMO/trunk/src/OCE/SBC/sbcmod.F90 (modified)

	Implement correction to sbcblk_algo_ncar for wave coupling (see
	#2014)


Thu, 13 Sep 2018 15:27:54 GMT cetlod [10127]
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsed.F90 (modified)

	Bugfix to allow the use of on-the-fly interpolation for PISCES
	ancillary ...


Wed, 12 Sep 2018 08:31:10 GMT andmirek [10114]
	* NEMO/trunk/src/OCE/DIA/diawri.F90 (modified)

	ticket #2123


Tue, 11 Sep 2018 10:12:57 GMT francesca [10112]
	* NEMO/trunk/src/OCE/SBC/cpl_oasis3.F90 (modified)

	fix ticket #2116


Tue, 11 Sep 2018 09:55:10 GMT cetlod [10111]
	* NEMO/trunk/cfgs/SHARED/namelist_pisces_ref (modified)
	* NEMO/trunk/src/TOP/PISCES/P4Z/p4zsbc.F90 (modified)

	v4.0 : bugfix to better estimate the coastal release of iron in
	PISCES


Fri, 07 Sep 2018 13:21:13 GMT smasson [10105]
	* NEMO/trunk/src/OCE/TRA/tramle.F90 (modified)

	trunk: minor bugfix in tramle


Fri, 07 Sep 2018 12:02:42 GMT cetlod [10097]
	* NEMO/trunk/src/TOP/TRP/trcnxt.F90 (modified)
	* NEMO/trunk/src/TOP/oce_trc.F90 (modified)

	v4.0 minor bug correction


Fri, 07 Sep 2018 11:38:22 GMT cetlod [10096]
	* NEMO/trunk/src/TOP/TRP/trcnxt.F90 (modified)
	* NEMO/trunk/src/TOP/TRP/trdtrc.F90 (modified)

	v4.0 : bugfix on tracer trends diagnostics, see ticket #1933


Fri, 07 Sep 2018 10:25:13 GMT cetlod [10095]
	* NEMO/trunk/src/OCE/TRA/tranxt.F90 (modified)

	v4.0 : bugfix on passive trends diagnostics, see ticket #2004


Tue, 28 Aug 2018 14:49:04 GMT nicolasmartin [10071]
	* NEMO/trunk/src/TOP/C14/sms_c14.F90 (modified)

	Hopefully the final fix for the header standardisation