# # ChangeLog for branches # # Generated by Trac 1.0.1 # 2024-04-27T08:45:42+02:00 Tue, 04 Feb 2014 12:17:48 GMT trackstand2 [4463] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdydta.F90 (modified) Use of mbkmax in bdy_dta_fra Tue, 04 Feb 2014 12:17:42 GMT trackstand2 [4462] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) Remove duplicate calc of mbkmax from domzgr Tue, 04 Feb 2014 12:17:35 GMT trackstand2 [4461] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) Remove duplicate calc of mbkmax and add debug check on tmask Tue, 04 Feb 2014 12:17:29 GMT trackstand2 [4460] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_bilapg.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_iso.F90 (modified) Addition of dbg SUM outputs and alteration of loop limits in dynldfiso ... Tue, 04 Feb 2014 12:17:04 GMT trackstand2 [4459] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Add debug SUM output to dynnxt and Dynamics section of step Tue, 04 Feb 2014 12:16:58 GMT trackstand2 [4458] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) Undo use of mbkmax in getting slope around Mixed Layer in ldfslp Tue, 04 Feb 2014 12:16:53 GMT trackstand2 [4457] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) Add mbkmax and z-first opt to dynhpg (hpg_sco) Tue, 04 Feb 2014 12:16:48 GMT trackstand2 [4456] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/divcur.F90 (modified) Add timing to div_cur Tue, 04 Feb 2014 12:16:43 GMT trackstand2 [4455] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) Add mbkmax to dyn_nxt Tue, 04 Feb 2014 12:16:38 GMT trackstand2 [4454] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf.F90 (modified) Use of mbkmax in computing trends in tra_zdf. Might not be exercised Tue, 04 Feb 2014 12:16:33 GMT trackstand2 [4453] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_iso.F90 (modified) Removed section timing from dynldf_iso Tue, 04 Feb 2014 12:16:26 GMT trackstand2 [4452] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_tvd.F90 (modified) Comment-out timings of sections within tra_adv_tvd Tue, 04 Feb 2014 12:16:21 GMT trackstand2 [4451] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traswp.F90 (modified) Add use of mbkmax to tra_nxt and traswp Tue, 04 Feb 2014 12:16:16 GMT trackstand2 [4450] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) Add mbkmax in dynvor Tue, 04 Feb 2014 12:16:11 GMT trackstand2 [4449] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) Slight opt for z-first in dyn_vor Tue, 04 Feb 2014 12:16:06 GMT trackstand2 [4448] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) Changes for z-first in dynvor.F90. Unoptimised. Tue, 04 Feb 2014 12:15:59 GMT trackstand2 [4447] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_iso.F90 (modified) Added mbkmax to dyn_ldf_iso Tue, 04 Feb 2014 12:15:54 GMT trackstand2 [4446] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) Use of mbkmax in ldf_slp->ldf_slp_mxl Tue, 04 Feb 2014 12:15:48 GMT trackstand2 [4445] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_tvd.F90 (modified) Use of mbkmax in nonosc Tue, 04 Feb 2014 12:15:42 GMT trackstand2 [4444] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_tvd.F90 (modified) Use of mbkmax in tra_adv_tvd Tue, 04 Feb 2014 12:15:36 GMT trackstand2 [4443] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfgls.F90 (modified) Use of mbkmax in zdfgls Tue, 04 Feb 2014 12:15:31 GMT trackstand2 [4442] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchmod.F90 (modified) Changed so that exchs_generic time is NOT subtracted from its parents Tue, 04 Feb 2014 12:15:26 GMT trackstand2 [4441] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Change timing so Diagnostics section is subtracted from Step time Tue, 04 Feb 2014 12:15:21 GMT trackstand2 [4440] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) Changes to timing calls to better deal with IO-heavy bits Tue, 04 Feb 2014 12:15:16 GMT trackstand2 [4439] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/divcur.F90 (modified) Added #if defined ARPDBGSUM around SUM dbg output in z-last div_cur Tue, 04 Feb 2014 12:14:59 GMT trackstand2 [4438] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) Protect debug SUM output in dynnxt and sshwzv with ARPDBGSUM Tue, 04 Feb 2014 12:14:54 GMT trackstand2 [4437] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchmod.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/partition_mod.F90 (modified) Trim columns in exchs_generic and init mbkmax in mpp_init3 Tue, 04 Feb 2014 12:14:49 GMT trackstand2 [4436] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdydyn.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdytides.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) Added timing calls Tue, 04 Feb 2014 12:14:43 GMT trackstand2 [4435] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdydyn.F90 (modified) Removed duplicate lbc_lnk call from bdy_dyn_fla Tue, 04 Feb 2014 12:14:38 GMT trackstand2 [4434] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdydyn.F90 (modified) Removed erroneous use of bound_exch_list in bdy_dyn_fla Tue, 04 Feb 2014 12:14:33 GMT trackstand2 [4433] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) mbkmax changes in dynspg_ts Tue, 04 Feb 2014 12:14:28 GMT trackstand2 [4432] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_bilapg.F90 (modified) mbkmax changes in dynldf_bilapg Tue, 04 Feb 2014 12:14:23 GMT trackstand2 [4431] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) Use of mbkmax in eosbn2 and trazdf_imp Tue, 04 Feb 2014 12:14:18 GMT trackstand2 [4430] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) Remove use of mbkmax in dynspg_ts Tue, 04 Feb 2014 12:14:13 GMT trackstand2 [4429] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) Fixed missing -1 on a z-loop limit Tue, 04 Feb 2014 12:14:06 GMT trackstand2 [4428] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) Add mbkmax to dynspg_ts and trazdf_imp Tue, 04 Feb 2014 12:14:00 GMT trackstand2 [4427] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynkeg.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_lap.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynzad.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) First files changed on last FINISS work package. Stephen's work although ... Tue, 04 Feb 2014 12:13:54 GMT trackstand2 [4426] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/IOM/iom_nf90.F90 (modified) Corrected jpk to jpkorig when defining z dimension for netcdf Tue, 04 Feb 2014 12:13:49 GMT trackstand2 [4425] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) Removed dump_array calls Tue, 04 Feb 2014 12:13:43 GMT trackstand2 [4424] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) Bug fixes - use jpkorig in allocates instead of jpk Tue, 04 Feb 2014 12:13:37 GMT trackstand2 [4423] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) Remove unused vars from nemogcm Tue, 04 Feb 2014 12:13:32 GMT trackstand2 [4422] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchmod.F90 (modified) Remove manual bounds check from exchmod Tue, 04 Feb 2014 12:13:27 GMT trackstand2 [4421] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/par_oce.F90 (modified) Added jpkorig to hold value before z trimming Tue, 04 Feb 2014 12:13:21 GMT trackstand2 [4420] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/ARCH/arch-BG_Joule.fcm (added) New arch file for BGQ Tue, 04 Feb 2014 12:13:15 GMT trackstand2 [4419] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/BDY/bdyini.F90 (modified) Explicit zeroing of bdytmask array Tue, 04 Feb 2014 12:13:08 GMT trackstand2 [4418] * branches/2011/DEV_r2739_STFC_dCSE/.gitignore (modified) Addition of EXP00 dirs to gitignore Tue, 04 Feb 2014 12:13:00 GMT trackstand2 [4417] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/divcur.F90 (modified) Added debug SUM outputs to div_cur Tue, 04 Feb 2014 12:12:55 GMT trackstand2 [4416] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) Added debug SUMs to dyn_nxt Tue, 04 Feb 2014 12:12:50 GMT trackstand2 [4415] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) Addition of SUM debug outputs in sshwzv Tue, 04 Feb 2014 12:12:45 GMT trackstand2 [4414] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Comment out dump_arrays in step Tue, 04 Feb 2014 12:12:40 GMT trackstand2 [4413] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/stpctl.F90 (modified) Remove debug output from stpctl Tue, 04 Feb 2014 12:12:36 GMT trackstand2 [4412] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/arpdebugging.f90 (modified) Added dump_1drarray() Tue, 04 Feb 2014 12:12:31 GMT trackstand2 [4411] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/ARCH/arch-XE6_HECTOR_Gnu.fcm (added) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/ARCH/arch-XE6_HECTOR_PGI.fcm (added) arch files for Gnu and PGI on Hector Tue, 04 Feb 2014 12:12:26 GMT trackstand2 [4410] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/daymod.F90 (modified) Fix to line length for Gnu compiler Tue, 04 Feb 2014 12:12:20 GMT trackstand2 [4409] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DTA/dtasal.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DTA/dtatem.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_bilapg.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchmod.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchtestmod.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/lbclnk.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfdyn.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_cen2.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_eiv.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_muscl.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_muscl2.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_qck.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_tvd.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_ubs.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_exp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/zpshde.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRD/trdicp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRD/trdmld.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRD/trdtra.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRD/trdvor.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) Changes to allow jpk to be modified to deepest level within a subdomain. ... Tue, 04 Feb 2014 12:12:14 GMT trackstand2 [4408] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DIA/diafwb.F90 (modified) Fixed bug where ji can go oob if mi1(ii0)==jpi Tue, 04 Feb 2014 12:12:09 GMT trackstand2 [4407] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/TOOLS/RK_PARTITION/README (modified) Update of partitioner readme file Tue, 04 Feb 2014 12:12:04 GMT trackstand2 [4406] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) Move from jpk to jpkf - trim sub-domains in z Tue, 04 Feb 2014 12:11:58 GMT trackstand2 [4405] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) Add option to switch trimming of sub-domains in z via NEMO_TRIM_DOMZ env ... Tue, 04 Feb 2014 12:11:52 GMT trackstand2 [4404] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Commented-out dump-arrays in stp() Tue, 04 Feb 2014 12:11:47 GMT trackstand2 [4403] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/arpdebugging.f90 (modified) Added optional atStep arg to dump_array Tue, 04 Feb 2014 12:11:41 GMT trackstand2 [4402] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) Added sub-domain z-trim optimisation to ldfslp Tue, 04 Feb 2014 12:11:35 GMT trackstand2 [4401] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_tvd.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) Put jpkf into traldf_iso and traadv_tvd (inc nonosc) Tue, 04 Feb 2014 12:11:29 GMT trackstand2 [4400] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchmod.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/LBC/exchtestmod.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/TOOLS/RK_PARTITION/README (added) Replace jpk with jpkf in bound_exch_generic. Turn on test timing of ... Tue, 04 Feb 2014 12:11:24 GMT trackstand2 [4399] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/NEMO/OPA_SRC/par_oce.F90 (modified) Add jpkf for deepest wet level of mpp sub-domain Tue, 04 Feb 2014 12:11:18 GMT trackstand2 [4398] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/TOOLS/COMPILE/tools.txt (modified) Last tool built Tue, 04 Feb 2014 12:11:13 GMT trackstand2 [4397] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/TOOLS/RK_PARTITION/src/partition_mod.f90 (modified) Turn off debug output Tue, 04 Feb 2014 12:11:04 GMT trackstand2 [4396] * branches/2011/DEV_r2739_STFC_dCSE/NEMOGCM/TOOLS/RK_PARTITION/src/partition_mod.f90 (modified) WIP on reading grid dims from netcdf Tue, 04 Feb 2014 09:01:26 GMT flavoni [4395] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_plot_all.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_ICE.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_ICE_FRAM.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_ICE_Vol.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh (modified) update IDL scripts, see ticket: #724 Mon, 03 Feb 2014 13:38:45 GMT flavoni [4394] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/README (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_plot_all.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_plot_bsf.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_plot_msf.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_plot_vardef.sh.new_names (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_AMOC.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_Drake.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_ICE.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_ICE_FRAM.pro (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_all.pro (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh.500yfwb0 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh.500yfwb2 (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh.l378sal6 (deleted) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh.new_names (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh.qsriceok (deleted) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh_example1 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh_example2 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh_example_ipcc (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/IDL_scripts/std_ts_vardef.sh_example_old_names (modified) add time series of FRAM STRAIT, and update IDL plots, see ticket: #724 Mon, 03 Feb 2014 09:40:50 GMT charris [4393] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) #1206 Fix for bug introduced under #1107. Mon, 03 Feb 2014 09:31:49 GMT charris [4391] * branches/2012/dev_v3_4_STABLE_2012/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) #1206 Fix for bug introduced under #1107. Fri, 31 Jan 2014 15:06:09 GMT hliu [4390] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/wadlmt.F90 (modified) some more on wadlmt.F90 Fri, 31 Jan 2014 14:55:04 GMT hliu [4389] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/wadlmt.F90 (modified) add a missed loop in wadlmt.F90 Fri, 31 Jan 2014 14:43:23 GMT cetlod [4388] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref (modified) minor corrections on PISCES namelist parameters Fri, 31 Jan 2014 13:48:39 GMT jchanut [4387] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Correct call to dom_vvl_sf_nxt (impacts ztilde and dynspg_flt only): ... Fri, 31 Jan 2014 13:45:46 GMT jchanut [4386] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) Typo error for timing Fri, 31 Jan 2014 13:43:21 GMT hliu [4385] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/wadlmt.F90 (modified) 1) Modified Wetting and Drying flux limiter part 2) I will apply all the ... Thu, 30 Jan 2014 17:07:56 GMT rfurner [4384] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) removed accidental duplication of ln_loglayer in ref namelist Thu, 30 Jan 2014 16:21:55 GMT rfurner [4383] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/AMM12/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) updates to AMM12 namelist options Wed, 29 Jan 2014 14:30:50 GMT cetlod [4382] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OFF_SRC/domain.F90 (modified) bugfix : read the namelist variable nn_euler, see ticket #1236 Wed, 29 Jan 2014 14:26:21 GMT jchanut [4381] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) bug with log bottom friction and namelist update Wed, 29 Jan 2014 13:54:00 GMT hliu [4380] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) wetting and drying: some bugs removed from dynspg_ts.F90 Wed, 29 Jan 2014 11:55:10 GMT rfurner [4379] * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/sette.sh (modified) small changes to SETTE to suit new AMM input tarfile Wed, 29 Jan 2014 11:54:01 GMT rfurner [4378] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) mask values before outputing in vvl case, see ticket 1213 Wed, 29 Jan 2014 11:46:33 GMT rfurner [4377] * branches/2013/dev_MERGE_2013/NEMOGCM/ARCH/arch-PW7_METO.fcm (modified) small updates to UKMO arch file Tue, 28 Jan 2014 18:47:54 GMT hliu [4376] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) updating wetting/drying filter for explicit time_splitting Tue, 28 Jan 2014 13:55:35 GMT hliu [4375] * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/CONFIG/cfg.txt (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DOM/dom_oce.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/DYN/wadlmt.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/par_oce.F90 (modified) * branches/2013/dev_r4050_NOC_WaD/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) updated gravity filters Mon, 27 Jan 2014 10:31:19 GMT jchanut [4374] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) Fixed small bug in flux form + clean header Sun, 26 Jan 2014 09:51:51 GMT epico [4373] * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00 (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/AA_job (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/domain_def.xml (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/field_def.xml (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/iodef.xml (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/namelist_cfg (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/namelist_ref (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_XIOS/cpp_GYRE_XIOS.fcm (added) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/cfg.txt (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-gfortran_athena_xios (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/param.cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/prepare_exe_dir.sh (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/prepare_job.sh (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/SETTE/sette_xios.sh (added) new SETTE test for testing XIOS in its 4 modes Attached/Detached, ... Fri, 24 Jan 2014 10:42:57 GMT jchanut [4372] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynnept.F90 (modified) fixed conflict with definition of ht(:,:) in dom_oce Fri, 24 Jan 2014 09:55:42 GMT rfurner [4371] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/SBC/fldread.F90 (modified) Fix to unitialised value in fld read, see ticket 1222 Thu, 23 Jan 2014 17:13:16 GMT jchanut [4370] * branches/2013/dev_MERGE_2013/NEMOGCM/ARCH/OLD/arch-ifort_MERCATOR_CLUSTER.fcm (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/AMM12/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/C1D_PAPA/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_BFM/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM_CFC_C14b/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/namelist_cfg (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/CONFIG/cfg.txt (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/BDY/bdydyn.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/dom_oce.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr_substitute.h90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/istate.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_oce.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) Time split cleaning / AMM12 restart / BDY and Agrif. See tickets #1228, ... Thu, 23 Jan 2014 16:38:37 GMT jchanut [4369] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Change time step order, ticket #1232 Thu, 23 Jan 2014 13:13:33 GMT jchanut [4368] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) fixed restartability problem, ticket #1230 Wed, 22 Jan 2014 16:59:24 GMT hadcv [4367] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/C1D/dyndmp.F90 (modified) Minor bug fix to C1D/dyndmp, see ticket #1229. Wed, 22 Jan 2014 14:57:03 GMT jchanut [4366] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domhgr.F90 (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) correct vvl initialization, ticket #1227 Wed, 22 Jan 2014 13:55:33 GMT jchanut [4365] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) add initialization of rnf_b, ticket #1226 Wed, 22 Jan 2014 13:46:03 GMT jchanut [4364] * branches/2013/dev_MERGE_2013/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_lap.F90 (modified) missing nn_timing flag, ticket #1224 Wed, 22 Jan 2014 11:11:47 GMT rfurner [4363] * branches/2013/dev_MERGE_2013/NEMOGCM/TOOLS/maketools (modified) * branches/2013/dev_MERGE_2013/NEMOGCM/fcm-make (copied) * branches/2013/dev_MERGE_2013/NEMOGCM/fcm-make/inc/common.cfg (modified) incuding fcm make option for building executables