# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-05-09T23:17:13+02:00 Tue, 27 Oct 2009 17:44:08 GMT smasson [1681] * trunk/CONFIG/GYRE/EXP00/iodef.xml (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/POMME/EXP00/iodef.xml (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfevd.F90 (modified) slight bugfix in iodef.xml, see ticket:566 Mon, 26 Oct 2009 13:31:23 GMT rblod [1680] * trunk/DOC/NEMO_book.pdf (modified) * trunk/DOC/NEMO_book.tex (modified) Cosmetic changes on documentation (correct references and page ... Mon, 26 Oct 2009 11:38:39 GMT cetlod [1679] * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/scripts/BB_make.ldef (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/scripts/BB_make.ldef (modified) Improve PISCES diagnostics for IPCC AR5 exercise, see ticket:567 Mon, 26 Oct 2009 11:38:26 GMT cetlod [1678] * trunk/NEMO/TOP_SRC/PISCES/p4zbio.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zflx.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zlys.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zmeso.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zmicro.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zmort.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zopt.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zsed.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/p4zsink.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/sms_pisces.F90 (modified) Improve PISCES diagnostics for IPCC AR5 exercise, see ticket:567 Wed, 21 Oct 2009 13:04:35 GMT cetlod [1672] * trunk/NEMO/OFF_SRC/DIA/dianam.F90 (modified) Improvment of dianam.F90 module in offline configuration, see ticket:564 Fri, 16 Oct 2009 10:09:46 GMT rblod [1671] * trunk/NEMO/OPA_SRC/DYN/dynbfr.F90 (added) * trunk/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) Add missing pieces related to previous commit on bottom friction ..., ... Thu, 15 Oct 2009 13:29:58 GMT flavoni [1666] * trunk/CONFIG/ORCA2_LIM/scripts/BB_make.ldef (modified) add key_diahth in BB_make.ldef Wed, 14 Oct 2009 16:51:06 GMT rblod [1662] * trunk/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdmod.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMO/OPA_SRC/step.F90 (modified) Correction of major bug on bottom friction, see ticket #233 Wed, 14 Oct 2009 14:30:35 GMT cetlod [1656] * trunk/NEMO/TOP_SRC/trcdia.F90 (modified) * trunk/NEMO/TOP_SRC/trcwri.F90 (modified) Creation of the date.file in OFFLINE mode, see ticket:551 Wed, 14 Oct 2009 14:26:01 GMT cetlod [1655] * trunk/NEMO/TOP_SRC/trcrst.F90 (modified) Call to write restart in TOP not properly done, see ticket:43 Wed, 14 Oct 2009 14:20:38 GMT cetlod [1654] * trunk/NEMO/OFF_SRC/DIA/dianam.F90 (modified) Phase the Offline module dianam.F90 with the the Online's one see ... Thu, 08 Oct 2009 09:28:49 GMT cetlod [1650] * trunk/CONFIG/GYRE/EXP00/iodef.xml (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) update iodef.xml files relative to changeset:1649 Thu, 08 Oct 2009 09:26:29 GMT cetlod [1649] * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) output 10m wind speed module, see ticket:555 Wed, 07 Oct 2009 15:16:58 GMT rblod [1648] * trunk/NEMO/OPA_SRC/OBC/obc_par_POMME_R025.h90 (added) * trunk/NEMO/OPA_SRC/par_POMME_R025.h90 (added) Add POMME configuration, step1, see ticket #554 Wed, 07 Oct 2009 15:15:07 GMT rblod [1647] * trunk/CONFIG/POMME (added) * trunk/CONFIG/POMME/AA_make (added) * trunk/CONFIG/POMME/AA_make.ldef (added) * trunk/CONFIG/POMME/EXP00 (added) * trunk/CONFIG/POMME/EXP00/AA_job (added) * trunk/CONFIG/POMME/EXP00/iodef.xml (added) * trunk/CONFIG/POMME/EXP00/namelist (added) * trunk/CONFIG/POMME/EXP00/xmlio_server.def (added) * trunk/CONFIG/POMME/scripts (added) * trunk/CONFIG/POMME/scripts/BB_make (added) * trunk/CONFIG/POMME/scripts/BB_make.ldef (added) * trunk/NEMO/OPA_SRC/OBC/obc_par.F90 (modified) * trunk/NEMO/OPA_SRC/par_oce.F90 (modified) * trunk/UTIL/fait_config (modified) Add POMME configuration, step1, see ticket #554 Wed, 07 Oct 2009 13:50:27 GMT cetlod [1646] * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/AA_job (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist_top (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/AA_job (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_top (modified) Update TOP namelist and jobs Wed, 07 Oct 2009 13:47:16 GMT cetlod [1645] * trunk/NEMO/TOP_SRC/trcdta.F90 (modified) renaming initial biogeochemical input data file Wed, 07 Oct 2009 13:46:07 GMT cetlod [1644] * trunk/NEMO/TOP_SRC/oce_trc.F90 (modified) Update shared ocean/bio namelist variables according to changeset:1542 Wed, 07 Oct 2009 13:44:29 GMT cetlod [1643] * trunk/NEMO/OFF_SRC/dtadyn.F90 (modified) Correction in estimation of wind module with masked wind stress Wed, 07 Oct 2009 13:43:11 GMT cetlod [1642] * trunk/NEMO/OFF_SRC/IOM/in_out_manager.F90 (modified) ctlopn cleanup, see changeset:1581 Wed, 07 Oct 2009 13:40:32 GMT cetlod [1641] * trunk/NEMO/OFF_SRC/DOM/domrea.F90 (modified) Update offline to take into account changes in mesh & mask files, see ... Wed, 07 Oct 2009 13:37:08 GMT cetlod [1640] * trunk/NEMO/OFF_SRC/DOM/domzgr_substitute.h90 (modified) update vertical scales factor definition according to changeset:1565 Mon, 05 Oct 2009 17:06:17 GMT rblod [1639] * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) Fix some bigs in s-coordinate, see ticket #366 and #380 Fri, 02 Oct 2009 10:21:08 GMT smasson [1637] * trunk/CONFIG/GYRE/EXP00/iodef.xml (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/iodef.xml (modified) mixup between level and output_level in iodef.xml files, see ticket:552 Fri, 02 Oct 2009 09:45:31 GMT smasson [1636] * trunk/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) date.file is no more existing when using key_iomput, see ticket:551 Fri, 02 Oct 2009 09:26:40 GMT smasson [1635] * trunk/NEMO/OPA_SRC/step.F90 (modified) bugfix for diahth variables when outputed without iom_put, see ... Tue, 22 Sep 2009 15:53:12 GMT rblod [1634] * trunk/CONFIG/GYRE/EXP00/namelist (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/1_namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist (modified) Syntax error in reference namelist, see ticket #547 Tue, 22 Sep 2009 15:46:58 GMT rblod [1633] * trunk/NEMO/OPA_SRC/OBC/obcini.F90 (modified) Fix syntax error in obcini, see ticket #545 Tue, 22 Sep 2009 15:45:34 GMT rblod [1632] * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) Fix a bug in domzgr, see ticket #549 Thu, 10 Sep 2009 12:30:24 GMT rblod [1630] * trunk/EXTERNAL/XMLIO_SERVER/AA_make (modified) Fix IOSERVER issues on NEC Thu, 10 Sep 2009 09:59:38 GMT rblod [1629] * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMO/OPA_SRC/lib_mpp.F90 (modified) Agrif compilation for nemo_v3_2_beta, see ticket #544 Wed, 02 Sep 2009 07:41:47 GMT smasson [1628] * trunk/NEMO/OPA_SRC/SBC/fldread.F90 (modified) add daily type of forcing file, see ticket:377 Tue, 01 Sep 2009 14:59:21 GMT smasson [1627] * trunk/NEMO/OPA_SRC/opa.F90 (modified) make sure that numout is open until the end of the job, see ticket:540 Tue, 01 Sep 2009 14:07:21 GMT smasson [1626] * trunk/CONFIG/GYRE/EXP00/iodef.xml (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) update GYRE and ORCA2_LIM_PISCES iodef.xml, see ticket:541 Tue, 01 Sep 2009 13:58:51 GMT smasson [1625] * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) bugfix of the id of the depth of the thermoline in iodef.xml Wed, 12 Aug 2009 16:17:55 GMT ctlod [1621] * trunk/CONFIG/GYRE/scripts/BB_make (modified) * trunk/CONFIG/GYRE_LOBSTER/scripts/BB_make (modified) * trunk/CONFIG/ORCA2_LIM/scripts/BB_make (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/scripts/BB_make (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/scripts/BB_make (modified) update dependencies files BB_make for each configuration, see ticket: ... Wed, 12 Aug 2009 15:14:22 GMT ctlod [1620] * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ZAGRIF.ksh (modified) NVTK: change nn_fwb and nn_sssr parameters value to ensure ... Wed, 12 Aug 2009 15:09:13 GMT ctlod [1619] * trunk/CONFIG/GYRE/EXP00/namelist (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist (modified) update GYRE and GYRE_LOBSTER configurations nn_htau parameter following ... Wed, 12 Aug 2009 15:05:02 GMT ctlod [1618] * trunk/CONFIG/ORCA2_LIM/EXP00/1_namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist (modified) update ORCA2_LIM and ORCA2_LIM_PISCES configurations namelist ... Wed, 12 Aug 2009 14:59:14 GMT ctlod [1617] * trunk/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdftke_old.F90 (modified) remove the TKE profile of penetration case (2) for the parameter ... Wed, 12 Aug 2009 11:30:15 GMT ctlod [1613] * trunk/NEMO/OPA_SRC/DOM/phycst.F90 (moved) * trunk/NEMO/OPA_SRC/IOM/prtctl.F90 (moved) * trunk/NEMO/OPA_SRC/IOM/restart.F90 (moved) * trunk/NEMO/OPA_SRC/SBC/geo2ocean.F90 (moved) * trunk/NEMO/OPA_SRC/TRA/eosbn2.F90 (moved) move few modules into different (more approriate) directories, see ... Wed, 12 Aug 2009 11:08:36 GMT ctlod [1612] * trunk/UTIL/fait_AA_make (modified) * trunk/UTIL/fait_config (modified) update scripts following the ticket #522, see ticket: #522 Wed, 12 Aug 2009 11:07:20 GMT ctlod [1611] * trunk/NVTK/Makefile (modified) * trunk/NVTK/fait_AA_make (modified) * trunk/NVTK/use_cfg (modified) update scripts following the ticket #522, see ticket: #522 Wed, 12 Aug 2009 10:55:23 GMT ctlod [1610] * trunk/NEMO/OPA_SRC/sms.F90 (deleted) remove useless dummy module sms.F90, see ticket: #522 Wed, 12 Aug 2009 10:38:09 GMT ctlod [1609] * trunk/NEMO/OPA_SRC/DTA/dtasal.F90 (modified) * trunk/NEMO/OPA_SRC/DTA/dtatem.F90 (modified) Bug in dtatem and dtasal with key_vvl, see ticket: #528 Wed, 12 Aug 2009 08:05:30 GMT ctlod [1608] * trunk/NEMO/LIM_SRC_3/dom_ice.F90 (modified) * trunk/NEMO/LIM_SRC_3/limmsh.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMO/LIM_SRC_3/par_ice.F90 (modified) nemo 3.1 LIM3 : remove useless akappa and alambd arrays, plus small ... Wed, 12 Aug 2009 08:01:24 GMT ctlod [1607] * trunk/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * trunk/NEMO/OPA_SRC/restart.F90 (modified) recover the sea-ice LIM3.0 restartability, see ticket: #529 Tue, 11 Aug 2009 13:33:19 GMT ctlod [1606] * trunk/NEMO/TOP_SRC/TRP/trcbbl.F90 (modified) * trunk/NEMO/TOP_SRC/TRP/trcbbl_adv.h90 (modified) * trunk/NEMO/TOP_SRC/oce_trc.F90 (modified) correct minor compilation error due to Doctor naming of OPA namelist ... Tue, 11 Aug 2009 12:33:40 GMT ctlod [1605] * trunk/NEMO/NST_SRC/agrif_oce.F90 (modified) * trunk/NEMO/NST_SRC/agrif_opa_interp.F90 (modified) * trunk/NEMO/NST_SRC/agrif_user.F90 (modified) Doctor naming of OPA namelist variables, see ticket: #526 Tue, 11 Aug 2009 12:32:53 GMT ctlod [1604] * trunk/NEMO/OPA_SRC/DOM/domain.F90 (modified) Doctor naming of OPA namelist variables, see ticket: #526 Tue, 11 Aug 2009 12:27:01 GMT ctlod [1603] * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE_LOBSTER.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM3.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ZAGRIF.ksh (modified) Doctor naming of OPA namelist variables, see ticket: #526 Tue, 11 Aug 2009 11:09:18 GMT ctlod [1602] * trunk/CONFIG/GYRE/EXP00/namelist (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/1_namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist (modified) Doctor naming of OPA namelist variables, see ticket: #526 Tue, 11 Aug 2009 10:09:19 GMT ctlod [1601] * trunk/NEMO/OPA_SRC/BDY/bdytides.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diagap.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/closea.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/dom_oce.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domain.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynadv.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynspg_flt.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * trunk/NEMO/OPA_SRC/FLO/flo_oce.F90 (modified) * trunk/NEMO/OPA_SRC/FLO/floats.F90 (modified) * trunk/NEMO/OPA_SRC/FLO/flowri.F90 (modified) * trunk/NEMO/OPA_SRC/IOM/in_out_manager.F90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldfdyn.F90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldfdyn_oce.F90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldftra.F90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldftra_oce.F90 (modified) * trunk/NEMO/OPA_SRC/OBC/obc_oce.F90 (modified) * trunk/NEMO/OPA_SRC/OBC/obcini.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/albedo.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcblk_core.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/sol_oce.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solmat.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solpcg.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solsor.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solver.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/traadv.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/trabbc.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/trabbl.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/trabbl_adv.h90 (modified) * trunk/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdicp.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdicp_oce.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdmld.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdmod.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdmod_oce.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdvor.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdf_oce.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfini.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfkpp.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfric.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdftke_old.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) * trunk/NEMO/OPA_SRC/eosbn2.F90 (modified) * trunk/NEMO/OPA_SRC/lib_cray.f90 (modified) * trunk/NEMO/OPA_SRC/lib_mpp.F90 (modified) * trunk/NEMO/OPA_SRC/mppini_2.h90 (modified) * trunk/NEMO/OPA_SRC/oce.F90 (modified) * trunk/NEMO/OPA_SRC/opa.F90 (modified) Doctor naming of OPA namelist variables , see ticket: #526 Tue, 11 Aug 2009 08:47:34 GMT ctlod [1598] * trunk/NEMO/OPA_SRC/opa.F90 (modified) ORCA2 potential error in ahm at the Equator, see ticket: #526 Tue, 11 Aug 2009 08:41:33 GMT ctlod [1597] * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make (modified) NVTK: correct a small bug when using many files into EXP_NAME direcotry, ... Thu, 06 Aug 2009 16:20:04 GMT smasson [1594] * trunk/NEMO/OPA_SRC/opa.F90 (modified) * trunk/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMO/OPA_SRC/trcini.F90 (deleted) * trunk/NEMO/OPA_SRC/trcstp.F90 (deleted) remove trcini and trcstp from OPA_SRC, see ticket:522 Thu, 06 Aug 2009 15:56:26 GMT smasson [1593] * trunk/NEMO/OPA_SRC/opa.F90 (modified) stye review of opa.F90, see ticket:521 Thu, 06 Aug 2009 15:34:20 GMT ctlod [1592] * trunk/NVTK/INSTALL/JOBS/CPU_time_osxxlf.ksh (modified) NVTK: correct minor bugs in the assessment step, see ticket: #520 Thu, 06 Aug 2009 15:33:14 GMT ctlod [1591] * trunk/NVTK/INSTALL/JOBS/CPU_time_sx8brodie.ksh (modified) * trunk/NVTK/INSTALL/JOBS/CPU_time_sx8mercure.ksh (modified) * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) NVTK: correct minor bugs in the assessment step, see ticket: #520 Thu, 06 Aug 2009 10:18:30 GMT smasson [1590] * trunk/NEMO/OPA_SRC/DOM/domwri.F90 (modified) 2D/3D e3 and gdep arrays in meshmask + bugfix for 2D case, see ... Thu, 06 Aug 2009 10:06:34 GMT ctlod [1589] * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) reduce the length of the solver.stat lines, see ticket: #511 Thu, 06 Aug 2009 10:06:21 GMT ctlod [1588] * trunk/NEMO/OPA_SRC/stpctl.F90 (modified) reduce the length of the solver.stat lines, see ticket: #511 Thu, 06 Aug 2009 07:44:20 GMT ctlod [1587] * trunk/NEMO/NST_SRC/agrif_opa_update.F90 (modified) remove compilation error when using AGRIF du to module wzvmod which has ... Thu, 06 Aug 2009 07:40:22 GMT ctlod [1586] * trunk/NVTK/Makefile (modified) NVTK: remove useless command (> dev/null) to avoid warning at ... Thu, 06 Aug 2009 07:29:43 GMT smasson [1585] * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/NEMO/OPA_SRC/DIA/diahth.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri_dimg.h90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) move back turbocline computation in zdfmxl, see ticket:517 Wed, 05 Aug 2009 16:48:09 GMT ctlod [1584] * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make (modified) * trunk/NVTK/fait_AA_make (modified) correct 2 bugs introduced following tickt: #516 Wed, 05 Aug 2009 15:58:24 GMT ctlod [1583] * trunk/NVTK/Makefile (modified) NVTK: light cleaning of few scripts, see ticket: #516 Wed, 05 Aug 2009 15:34:54 GMT ctlod [1582] * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make (modified) * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make.ldef (modified) * trunk/NVTK/INSTALL/ins_nvtk.ksh (modified) * trunk/NVTK/Makefile (modified) * trunk/NVTK/fait_AA_make (modified) NVTK: light cleaning of few scripts, see ticket: #516 Wed, 05 Aug 2009 14:53:12 GMT smasson [1581] * trunk/NEMO/C1D_SRC/diawri_c1d.F90 (modified) * trunk/NEMO/LIM_SRC_2/iceini_2.F90 (modified) * trunk/NEMO/LIM_SRC_2/limdia_2.F90 (modified) * trunk/NEMO/LIM_SRC_3/iceini.F90 (modified) * trunk/NEMO/LIM_SRC_3/limdia.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diadimg.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diafwb.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/FLO/flodom.F90 (modified) * trunk/NEMO/OPA_SRC/FLO/flowri.F90 (modified) * trunk/NEMO/OPA_SRC/IOM/in_out_manager.F90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldfdyn_c2d.h90 (modified) * trunk/NEMO/OPA_SRC/LDF/ldfdyn_c3d.h90 (modified) * trunk/NEMO/OPA_SRC/OBC/obcrst.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcfwb.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solver.F90 (modified) * trunk/NEMO/OPA_SRC/TRD/trdmld.F90 (modified) * trunk/NEMO/OPA_SRC/ctlopn.F90 (deleted) * trunk/NEMO/OPA_SRC/mppini.F90 (modified) * trunk/NEMO/OPA_SRC/mppini_2.h90 (modified) * trunk/NEMO/OPA_SRC/opa.F90 (modified) * trunk/NEMO/OPA_SRC/prtctl.F90 (modified) * trunk/NEMO/OPA_SRC/stpctl.F90 (modified) * trunk/NEMO/OPA_SRC/trc_oce.F90 (modified) * trunk/NEMO/TOP_SRC/C14b/trcini_c14b.F90 (modified) * trunk/NEMO/TOP_SRC/C14b/trclsm_c14b.F90 (modified) * trunk/NEMO/TOP_SRC/CFC/trcini_cfc.F90 (modified) * trunk/NEMO/TOP_SRC/CFC/trclsm_cfc.F90 (modified) * trunk/NEMO/TOP_SRC/LOBSTER/trclsm_lobster.F90 (modified) * trunk/NEMO/TOP_SRC/PISCES/trclsm_pisces.F90 (modified) * trunk/NEMO/TOP_SRC/SED/sedini.F90 (modified) * trunk/NEMO/TOP_SRC/TRP/trdmld_trc.F90 (modified) * trunk/NEMO/TOP_SRC/prtctl_trc.F90 (modified) * trunk/NEMO/TOP_SRC/trclec.F90 (modified) ctlopn cleanup, see ticket:515 and ticket:237 Wed, 05 Aug 2009 13:54:18 GMT smasson [1580] * trunk/NEMO/OPA_SRC/lib_isml.f90 (deleted) remove lib_isml.f90, see ticket:502 Wed, 05 Aug 2009 10:14:11 GMT smasson [1579] * trunk/NEMO/OPA_SRC/IOM/in_out_manager.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/cpl_oasis3.F90 (modified) * trunk/NEMO/OPA_SRC/lib_mpp.F90 (modified) * trunk/NEMO/OPA_SRC/opa.F90 (modified) avoid write in numout before definition of lwp, see ticket:237 Wed, 05 Aug 2009 08:04:11 GMT ctlod [1578] * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist_top (modified) rename namelist variable lrsttr to ln_rsttr, see ticket: #493 Tue, 04 Aug 2009 14:56:59 GMT smasson [1577] * trunk/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/NEMO/OPA_SRC/DIA/diahth.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri_dimg.h90 (modified) * trunk/NEMO/OPA_SRC/DOM/dom_oce.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) update diahth and zdfmxl, see ticket:468 Tue, 04 Aug 2009 13:56:13 GMT ctlod [1576] * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make (modified) * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) * trunk/NVTK/INSTALL/JOBS/cron_jobs.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE_LOBSTER.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM3.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_OFF_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/lance_batch.ksh (modified) * trunk/NVTK/INSTALL/ins_nvtk.ksh (modified) * trunk/NVTK/Makefile (modified) NVTK: allow to manage multiple experiences in parallel, see ticket: #514 Tue, 04 Aug 2009 08:37:24 GMT ctlod [1575] * trunk/NVTK/Makefile (modified) NVTK: few changes to allow NVTK to manage properly MPI runs, see ticket: ... Tue, 04 Aug 2009 08:35:22 GMT ctlod [1574] * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make (modified) * trunk/NVTK/INSTALL/CONFIG_FILES/AA_make.ldef (modified) * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) * trunk/NVTK/INSTALL/JOBS/lance_batch.ksh (modified) * trunk/NVTK/INSTALL/ins_nvtk.ksh (modified) NVTK: few changes to allow NVTK to manage properly MPI runs, see ticket: ... Mon, 03 Aug 2009 15:57:25 GMT ctlod [1573] * trunk/NEMO/OPA_SRC/SBC/sbcfwb.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) Add a control on the nn_fwb parameter, it is related to ticket #501 Mon, 03 Aug 2009 14:53:15 GMT ctlod [1572] * trunk/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd_dh.F90 (modified) Cosmetic changes only following the bugs correction related to ticket: ... Mon, 03 Aug 2009 14:24:31 GMT ctlod [1571] * trunk/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd_dh.F90 (modified) Correct 3 bugs in LIM-3, see ticket: #505 Fri, 31 Jul 2009 17:44:52 GMT smasson [1570] * trunk/EXTERNAL/XMLIO_SERVER/AA_make (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM3.ksh (modified) IOSERVER working with NVTK, see ticket:510 Fri, 31 Jul 2009 16:37:36 GMT ctlod [1569] * trunk/NEMO/LIM_SRC_2/limrhg_2.F90 (modified) correction of a bug in the Coriolis term in the rheology of LIM2, see ... Fri, 31 Jul 2009 16:32:10 GMT ctlod [1568] * trunk/NVTK/Makefile (modified) NVTK: improve it with new functionnality mainly for the developpers, see ... Fri, 31 Jul 2009 14:39:55 GMT ctlod [1567] * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diawri_dimg.h90 (modified) DIMG: remove kindic argument from dia_wri call subroutine, see ticket: ... Fri, 31 Jul 2009 14:34:08 GMT rblod [1566] * trunk/NEMO/OPA_SRC/DOM/domcfg.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynadv_cen2.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynadv_ubs.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynspg.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/dynspg_oce.F90 (modified) * trunk/NEMO/OPA_SRC/DYN/wzvmod.F90 (deleted) * trunk/NEMO/OPA_SRC/LDF/ldftra_c3d.h90 (modified) * trunk/NEMO/OPA_SRC/SOL/solmat.F90 (modified) * trunk/NEMO/OPA_SRC/istate.F90 (modified) * trunk/NEMO/OPA_SRC/stpctl.F90 (modified) Cosmetic changes: suppress useless variables and code review of the code ... Fri, 31 Jul 2009 14:01:08 GMT rblod [1565] * trunk/NEMO/LIM_SRC_2/limthd_2.F90 (modified) * trunk/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMO/OPA_SRC/DOM/domzgr_substitute.h90 (modified) * trunk/NEMO/OPA_SRC/DYN/sshwzv.F90 (copied) * trunk/NEMO/OPA_SRC/step.F90 (modified) Use appropiate e3 for divergence computation and for sea-ice, see ticket ... Fri, 31 Jul 2009 12:31:31 GMT ctlod [1564] * trunk/NVTK/INSTALL/JOBS/CPU_time_aix6.ksh (modified) * trunk/NVTK/INSTALL/JOBS/CPU_time_osxxlf.ksh (modified) * trunk/NVTK/INSTALL/JOBS/CPU_time_sx8brodie.ksh (modified) * trunk/NVTK/INSTALL/JOBS/CPU_time_sx8mercure.ksh (modified) * trunk/NVTK/INSTALL/JOBS/MEM_size_aix6.ksh (modified) * trunk/NVTK/INSTALL/JOBS/MEM_size_osxxlf.ksh (modified) * trunk/NVTK/INSTALL/JOBS/MEM_size_sx8brodie.ksh (modified) * trunk/NVTK/INSTALL/JOBS/MEM_size_sx8mercure.ksh (modified) * trunk/NVTK/INSTALL/JOBS/assessment.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_GYRE_LOBSTER.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM3.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_LIM_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ORCA2_OFF_PISCES.ksh (modified) * trunk/NVTK/INSTALL/JOBS/job_ZAGRIF.ksh (modified) * trunk/NVTK/INSTALL/ins_nvtk.ksh (modified) * trunk/NVTK/Makefile (modified) NVTK: improve it with new functionnality mainly for the developpers,see ... Thu, 30 Jul 2009 13:28:37 GMT cetlod [1563] * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist_pisces (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/iodef.xml (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_pisces (modified) update namelist according to ticket:503 Thu, 30 Jul 2009 13:28:08 GMT cetlod [1562] * trunk/NEMO/TOP_SRC/PISCES/p4zprod.F90 (modified) * trunk/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) rename some PISCES diag variables, see ticket:503 Thu, 30 Jul 2009 08:50:07 GMT ctlod [1561] * trunk/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMO/OPA_SRC/stpctl.F90 (modified) Fix output state following an error state trapped by stpctl.F90, see ... Wed, 29 Jul 2009 17:19:42 GMT rblod [1560] * trunk/EXTERNAL/MISC/makemake_XMLF90.perl (modified) * trunk/EXTERNAL/MISC/makemake_XMLIO.perl (modified) * trunk/EXTERNAL/XMLF90/AA_make (modified) * trunk/EXTERNAL/XMLIO_SERVER/AA_make (modified) * trunk/EXTERNAL/XMLIO_SERVER/KEY_CPP (added) * trunk/NVTK/Makefile (modified) * trunk/NVTK/fait_AA_make (modified) external: some additions to test IOSERVER with NVTK Wed, 29 Jul 2009 14:03:14 GMT ctlod [1559] * trunk/NEMO/LIM_SRC_2/limthd_2.F90 (modified) * trunk/NEMO/OPA_SRC/BDY/bdydyn.F90 (modified) * trunk/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) * trunk/NEMO/OPA_SRC/SBC/sbcana.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/traadv_cen2.F90 (modified) * trunk/NEMO/OPA_SRC/TRA/traadv_qck.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfini.F90 (modified) * trunk/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) * trunk/NEMO/OPA_SRC/daymod.F90 (modified) * trunk/NEMO/OPA_SRC/eosbn2.F90 (modified) * trunk/NEMO/OPA_SRC/lib_mpp.F90 (modified) only cosmetic changes Wed, 29 Jul 2009 13:57:52 GMT smasson [1558] * trunk/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) redo changeset:1532 accidentally destroyed by changeset:1534 Wed, 29 Jul 2009 13:57:14 GMT smasson [1557] * trunk/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) redo changeset:1532 accidentally destroyed by changeset:1534 Wed, 29 Jul 2009 10:51:45 GMT rblod [1556] * trunk/CONFIG/GYRE/EXP00/namelist (modified) * trunk/CONFIG/GYRE/scripts/BB_make (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist (modified) * trunk/CONFIG/GYRE_LOBSTER/scripts/BB_make (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/1_namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM/scripts/BB_make (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/scripts/BB_make (modified) * trunk/NEMO/OPA_SRC/DYN/dynspg_flt.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/sol_oce.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solfet.F90 (deleted) * trunk/NEMO/OPA_SRC/SOL/solmat.F90 (modified) * trunk/NEMO/OPA_SRC/SOL/solver.F90 (modified) * trunk/NEMO/OPA_SRC/cla_dynspg.F90 (modified) * trunk/NEMO/OPA_SRC/lib_feti.F90 (deleted) * trunk/NEMO/OPA_SRC/mppini.F90 (modified) * trunk/NEMO/OPA_SRC/mppini_2.h90 (modified) Suppress FETI solver, see ticket #502 Wed, 29 Jul 2009 10:30:23 GMT ctlod [1555] * trunk/CONFIG/GYRE/EXP00/namelist (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/1_namelist (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/namelist (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist (modified) add the possibility to bound the sea surface salinity damping term ... Wed, 29 Jul 2009 10:30:10 GMT ctlod [1554] * trunk/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) add the possibility to bound the sea surface salinity damping term ... Wed, 29 Jul 2009 10:29:21 GMT ctlod [1553] * trunk/NEMO/OPA_SRC/SBC/sbcfwb.F90 (modified) add an option to control the global freshwater budget emp in sbcfwb.F90, ... Wed, 29 Jul 2009 10:14:59 GMT smasson [1552] * trunk/CONFIG/GYRE/EXP00/xmlio_server.def (modified) * trunk/CONFIG/GYRE_LOBSTER/EXP00/xmlio_server.def (modified) * trunk/CONFIG/ORCA2_LIM/EXP00/xmlio_server.def (modified) * trunk/CONFIG/ORCA2_LIM_PISCES/EXP00/xmlio_server.def (modified) * trunk/CONFIG/ORCA2_OFF_PISCES/EXP00/xmlio_server.def (modified) update ioserver namelist, see ticket:500 Wed, 29 Jul 2009 10:12:02 GMT smasson [1551] * trunk/NEMO/OPA_SRC/DIA/diahth.F90 (modified) bugfix in the new 300m heat contain, see ticket:342 Wed, 29 Jul 2009 09:20:21 GMT ctlod [1550] * trunk/NEMO/LIM_SRC_2/limsbc_2.F90 (modified) missing soce_r(:,:) and sice_r(:,:) initialisation if the configuration ...