# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-04-19T07:18:12+02:00 Wed, 08 Mar 2017 11:57:44 GMT timgraham [7768] * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) Correct typo in previous commit (caused an out of bounds error). Wed, 08 Mar 2017 11:30:41 GMT clem [7767] * trunk/NEMOGCM/CONFIG/SHARED/field_def_nemo-lim.xml (modified) * trunk/NEMOGCM/CONFIG/SHARED/field_def_nemo-opa.xml (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ice_lim3_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) change some reference parameters for sea-ice + cleaning xml files + ... Tue, 07 Mar 2017 12:45:51 GMT timgraham [7765] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) Fix for #1862 Tue, 07 Mar 2017 12:17:36 GMT timgraham [7764] * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) Fix ticket #1861 - allow output of files with frequency set in minutes ... Mon, 06 Mar 2017 17:58:35 GMT clem [7761] * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_lim3_interp.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_lim3_update.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_user.F90 (modified) * trunk/NEMOGCM/NEMO/OFF_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/phycst.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/daymod.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/step.F90 (modified) make AGRIF and LIM3 fully compatible Fri, 03 Mar 2017 13:32:40 GMT timgraham [7756] * trunk/NEMOGCM/CONFIG/makenemo (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) Modification to makenemo and sette.sh so that ORCA2_LIM3_OBS and AGRIF ... Fri, 03 Mar 2017 11:57:10 GMT mocavero [7755] * trunk/NEMOGCM/ARCH/CMCC/arch-ifort_athena_xios_omp.fcm (deleted) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena_xios_omp (deleted) Removed OpenMP arch file and batch template for CMCC Fri, 03 Mar 2017 11:51:06 GMT mocavero [7754] * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_closea.F90 (modified) Reverting trunk to remove OpenMP Fri, 03 Mar 2017 11:46:59 GMT mocavero [7753] * trunk/NEMOGCM/NEMO/LIM_SRC_3/limadv_umx.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdyn.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_th.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrhg.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrst.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limsbc.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_da.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_lac.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate1.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limvar.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limwri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/BDY/bdy_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/dia25h.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaar5.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diacfl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diahsb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/depth_e3.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domhgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dtatsd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/divhor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynkeg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_lap_blp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzad.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfc1d_c2d.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfdyn.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldftra.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/albedo.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/geo2ocean.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_algo_ncar.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mle.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mus.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/zpshde.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_hgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_sbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_zgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfevd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zagg.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zfechem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zint.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlim.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlys.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmeso.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmicro.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmort.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zpoc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zrem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsink.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcadv.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcbbl.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcldf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcnxt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcrad.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trczdf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcice.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcrst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) * trunk/NEMOGCM/SETTE/prepare_job.sh (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) Reverting trunk to remove OpenMP Thu, 02 Mar 2017 12:58:45 GMT jchanut [7752] * trunk/NEMOGCM/EXTERNAL/AGRIF/AGRIF_FILES/modinterp.F90 (modified) AGRIF mpp reproducibility fix, see tickets #1855 and #1569 Tue, 28 Feb 2017 12:45:59 GMT flavoni [7746] * trunk/NEMOGCM/SETTE/sette_rpt (deleted) remove old report script Tue, 28 Feb 2017 11:34:10 GMT flavoni [7744] * trunk/NEMOGCM/SETTE/sette.sh (modified) upadate tests for GYRE_PISCES, to allow restartability now Tue, 28 Feb 2017 09:55:27 GMT flavoni [7743] * trunk/NEMOGCM/SETTE/sette.sh (modified) fix for sette_rpt.sh; set just 1 variable COMPILER in sette.sh Fri, 24 Feb 2017 14:19:57 GMT flavoni [7732] * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/README (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/initenv.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_common.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main.sav (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main.sh (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main_1Y.sh (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main_5D.sh (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_main_last_year_5D.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_ArcSal.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_EqS.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_EqT.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_EqU.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_GlobMeanTS.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_IceAge.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_IceFrac.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_IceSal.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_IceThick.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_IceVel.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_MLD_ortho.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_Med_Sdepth.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_Med_Sspread.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_S100m.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_SnowThick.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_T100m.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_ZonMld.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_all.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_all_1Y.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_all_last_year_5D.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_bsf.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_emp.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_erp.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_max_mld.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_mht.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_mld.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_msf.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_qnet.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_sss.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_sst.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh.last_year_5D (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh.new_names (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh.old_names (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh_example1 (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_vardef.sh_example2 (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_zonal_S.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_plot_zonal_T.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_AMOC.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_Drake.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_EMP.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_ICE.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_ICE_FRAM.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_ICE_Vel.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_ICE_Vol.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_Q.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_S.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_SSH.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_T.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_all.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_read.pro (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh.new_names (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh_example1 (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh_example2 (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh_example_ipcc (added) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/IDL_scripts/std_ts_vardef.sh_example_old_names (added) commit idl scripts deleted Thu, 23 Feb 2017 10:27:18 GMT flavoni [7722] * trunk/NEMOGCM/SETTE/sette.sh (modified) update test for ORCA2_LIM3_OBS, active with pisces Wed, 22 Feb 2017 14:20:01 GMT flavoni [7715] * trunk/NEMOGCM/ARCH/arch-X64_ADA.fcm (modified) * trunk/NEMOGCM/ARCH/arch-X64_ADA_DEBUG.fcm (modified) * trunk/NEMOGCM/ARCH/arch-X64_ADA_O0.fcm (added) * trunk/NEMOGCM/CONFIG/GYRE (deleted) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_top_cfg (modified) * trunk/NEMOGCM/CONFIG/ISOMIP (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3 (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/EXP00/1_namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/EXP00/1_namelist_ice_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM (deleted) * trunk/NEMOGCM/CONFIG/README-setup-configs (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/ISOMIP_mlt.png (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/ISOMIP_moc.png (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/ISOMIP_psi.png (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/README (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/context_nemo.xml (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/domain_def_nemo.xml (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/field_def_nemo-opa.xml (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/file_def_nemo-opa.xml (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/iodef.xml (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/namelist_cfg (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/namelist_ref (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/plot_mlt.py (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/plot_moc.py (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/EXP00/plot_psi.py (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC/usrdef_hgr.F90 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC/usrdef_istate.F90 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC/usrdef_nam.F90 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC/usrdef_sbc.F90 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/MY_SRC/usrdef_zgr.F90 (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/ISOMIP/cpp_ISOMIP.fcm (added) * trunk/NEMOGCM/CONFIG/TEST_CASES/README (modified) * trunk/NEMOGCM/CONFIG/TEST_CASES/cfg.txt (modified) * trunk/NEMOGCM/CONFIG/cfg.txt (modified) * trunk/NEMOGCM/CONFIG/makenemo (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_hgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_nam.F90 (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_ADA (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_ADA_DEBUG (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_ADA_O0 (modified) * trunk/NEMOGCM/SETTE/all_functions.sh (modified) * trunk/NEMOGCM/SETTE/input_ISOMIP.cfg (deleted) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM.cfg (deleted) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM3.cfg (deleted) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM_AGRIF.cfg (deleted) * trunk/NEMOGCM/SETTE/iodef_sette.xml (modified) * trunk/NEMOGCM/SETTE/prepare_exe_dir.sh (modified) * trunk/NEMOGCM/SETTE/prepare_job.sh (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) * trunk/NEMOGCM/SETTE/sette_rpt (modified) * trunk/NEMOGCM/SETTE/sette_rpt.sh (modified) #1850 commit new list of REFERENCE CONFIGURATIONS, and SETTE tests Tue, 21 Feb 2017 16:00:18 GMT acc [7710] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) Trunk fix for ticket #1852. Add initialisation of sbc_tsc in trasbc.F90 ... Tue, 21 Feb 2017 12:53:54 GMT flavoni [7705] * trunk/DOC/NEMO_book.pdf (modified) * trunk/DOC/Namelists/namcfg (modified) * trunk/DOC/TexFiles/Chapters/Chap_CFG.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DOM.tex (modified) * trunk/DOC/TexFiles/Preamble.tex (modified) update NEMO documentation in trunk Sat, 18 Feb 2017 09:10:59 GMT mocavero [7699] * trunk/NEMOGCM/ARCH/CMCC/arch-ifort_athena_xios_omp.fcm (added) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena_xios_omp (added) added OpenMP arch file and batch template for CMCC Sat, 18 Feb 2017 09:02:03 GMT mocavero [7698] * trunk/NEMOGCM/NEMO/LIM_SRC_3/limadv_umx.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdyn.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_th.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrhg.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrst.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limsbc.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_da.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_lac.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate1.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limvar.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limwri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/BDY/bdy_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/dia25h.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaar5.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diacfl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diahsb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/depth_e3.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domhgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dtatsd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/divhor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynkeg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf_lap_blp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzad.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfc1d_c2d.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfdyn.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldftra.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/albedo.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/geo2ocean.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_algo_ncar.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mle.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mus.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/zpshde.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_closea.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_hgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_sbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR/usrdef_zgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfevd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zagg.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zfechem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zint.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlim.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlys.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmeso.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmicro.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmort.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zpoc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zrem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsink.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcadv.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcbbl.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcldf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcnxt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcrad.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trczdf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcice.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcrst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) * trunk/NEMOGCM/SETTE/prepare_job.sh (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) update trunk with OpenMP parallelization Tue, 14 Feb 2017 17:56:01 GMT cetlod [7681] * trunk/NEMOGCM/ARCH/arch-macport_osx.fcm (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdtrc.F90 (modified) Remove unused routines trd_mld_bio etc ... Mon, 06 Feb 2017 09:25:57 GMT timgraham [7647] * trunk/NEMOGCM/NEMO/LIM_SRC_2/limrhg.F90 (added) Add LIM_SRC_2/limrhg.F90 back in after merge of dev_merge_2016 Mon, 06 Feb 2017 09:25:03 GMT timgraham [7646] * trunk (modified) * trunk/DOC (modified) * trunk/DOC/NEMO_book.pdf (copied) * trunk/DOC/Namelists/nam_tide (modified) * trunk/DOC/Namelists/nambdy (modified) * trunk/DOC/Namelists/nambdy_dta (modified) * trunk/DOC/TexFiles/Bibliography/Biblio.bib (modified) * trunk/DOC/TexFiles/Chapters/Chap_CFG.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DYN.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_MISC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Top_Matter.tex (modified) * trunk/NEMOGCM (modified) * trunk/NEMOGCM/ARCH/INGV/arch-IBM_EKMAN_INGV.fcm (modified) * trunk/NEMOGCM/ARCH/OLD/NOC/arch-ALTIX_NAUTILUS.fcm (modified) * trunk/NEMOGCM/ARCH/arch-ALTIX_NAUTILUS_MPT.fcm (modified) * trunk/NEMOGCM/ARCH/arch-THALASSA.fcm (copied) * trunk/NEMOGCM/ARCH/arch-X64_ADA_DEBUG.fcm (copied) * trunk/NEMOGCM/ARCH/arch-X64_ADA_O0.fcm (deleted) * trunk/NEMOGCM/ARCH/arch-X64_MOBILIS.fcm (modified) * trunk/NEMOGCM/ARCH/arch-XC40_METO.fcm (modified) * trunk/NEMOGCM/ARCH/arch-macport_osx.fcm (modified) * trunk/NEMOGCM/ARCH/arch-macport_osx_debug.fcm (copied) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/file_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/AMM12/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/AMM12/cpp_AMM12.fcm (modified) * trunk/NEMOGCM/CONFIG/C1D_PAPA/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/field_def_nemo-pisces.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/field_def_nemo-pisces.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_pisces_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_top_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/cpp_GYRE_PISCES.fcm (modified) * trunk/NEMOGCM/CONFIG/GYRE_XIOS (deleted) * trunk/NEMOGCM/CONFIG/ISOMIP (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/1_namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/field_def_nemo-lim.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef_ar5.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef_crs.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef_demo.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef_oldstyle.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/1_namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/1_namelist_ice_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/field_def_nemo-lim.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_ice_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3_PISCES (copied) * trunk/NEMOGCM/CONFIG/ORCA2_LIM_CFC_C14b (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_LIM_PISCES (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/field_def_nemo-pisces.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_pisces_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_top_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/IGCM00 (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/cpp_ORCA2_OFF_PISCES.fcm (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_TRC (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/context_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/field_def_nemo-lim.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/file_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/iodef.xml (modified) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/IDL_scripts (deleted) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM3 (copied) * trunk/NEMOGCM/CONFIG/SHARED (modified) * trunk/NEMOGCM/CONFIG/SHARED/ForXIOS2 (copied) * trunk/NEMOGCM/CONFIG/SHARED/domain_def.xml (deleted) * trunk/NEMOGCM/CONFIG/SHARED/domain_def_nemo.xml (copied) * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (deleted) * trunk/NEMOGCM/CONFIG/SHARED/field_def_nemo-lim.xml (copied) * trunk/NEMOGCM/CONFIG/SHARED/field_def_nemo-opa.xml (copied) * trunk/NEMOGCM/CONFIG/SHARED/field_def_nemo-pisces.xml (copied) * trunk/NEMOGCM/CONFIG/SHARED/namelist_c14b_ref (deleted) * trunk/NEMOGCM/CONFIG/SHARED/namelist_cfc_ref (deleted) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ice_lim3_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_top_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_trc_ref (copied) * trunk/NEMOGCM/CONFIG/TEST_CASES (copied) * trunk/NEMOGCM/CONFIG/cfg.txt (modified) * trunk/NEMOGCM/CONFIG/makenemo (modified) * trunk/NEMOGCM/EXTERNAL/AGRIF (modified) * trunk/NEMOGCM/NEMO (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/dom_ice_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/iceini_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limdmp_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limdyn_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limistate_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limmsh_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limrhg.F90 (deleted) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limrhg_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limsbc_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limthd_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_2/limtrp_2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/dom_ice.F90 (deleted) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limadv.F90 (deleted) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limadv_prather.F90 (copied) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limadv_umx.F90 (copied) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limcons.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limctl.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdiahsb.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdyn.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_th.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limmsh.F90 (deleted) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrhg.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrst.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limsbc.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_da.F90 (copied) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_dh.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_dif.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_lac.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_sal.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate1.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limvar.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limwri.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/thd_ice.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_ice.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_lim3_interp.F90 (copied) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_lim3_update.F90 (copied) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_opa_interp.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_opa_sponge.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_opa_update.F90 (modified) * trunk/NEMOGCM/NEMO/NST_SRC/agrif_user.F90 (modified) * trunk/NEMOGCM/NEMO/OFF_SRC/domrea.F90 (deleted) * trunk/NEMOGCM/NEMO/OFF_SRC/dtadyn.F90 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trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaar5.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diadct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diafwb.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaharm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diahsb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaptr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diatmb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIU/cool_skin.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIU/step_diu.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/closea.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/daymod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/depth_e3.F90 (copied) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dom_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domcfg.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domhgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dommsk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domngb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domstp.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domwri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/dtatsd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/iscplhsb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/iscplini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/iscplrst.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/istate.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/phycst.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynadv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynkeg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynnxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynvor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/wet_dry.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/FLO/floblk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/FLO/flodom.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/FLO/florst.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbutl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/in_out_manager.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom_def.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom_nf90.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lbcnfd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/mppini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/mppini_2.h90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfc1d_c2d.F90 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trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_core.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_mfs.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_cice.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_if.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim_2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcisf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbctide.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcwave.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/tideini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/updtide.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_cen.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mle.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mus.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_qck.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_ubs.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_lap_blp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_triad.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trd_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdken.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdtra.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/USR (copied) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdf_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfevd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfgls.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfqiao.F90 (copied) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfric.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/lib_fortran.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/par_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/trc_oce.F90 (modified) * trunk/NEMOGCM/NEMO/SAO_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/SAO_SRC/sao_data.F90 (modified) * trunk/NEMOGCM/NEMO/SAO_SRC/sao_intp.F90 (modified) * trunk/NEMOGCM/NEMO/SAO_SRC/sao_read.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/daymod.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/AGE (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/C14 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/C14b (deleted) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/par_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcice_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcini_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcnam_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcsms_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcwri_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/par_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcice_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcini_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcnam_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcsms_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcwri_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zexp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zagg.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zfechem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zint.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zligand.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlim.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlys.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmeso.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmicro.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmort.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zpoc.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zrem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsink.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p5zlim.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p5zmeso.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p5zmicro.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p5zmort.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p5zprod.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/SED/par_sed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/SED/sed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/SED/seddta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/SED/sedmodel.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/par_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/sms_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcice_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcnam_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcsms_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcwri_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcadv.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcbbl.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcdmp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcnxt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcrad.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trctrp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trczdf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdmxl_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdmxl_trc_rst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdtrc_oce.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/oce_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/par_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/prtctl_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcbdy.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdia.F90 (deleted) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcice.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcnam.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcrst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcsub.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcwri.F90 (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_ADA_DEBUG (copied) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-X64_MOBILIS (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena_xios (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-macport_osx_debug (copied) * trunk/NEMOGCM/SETTE/README (modified) * trunk/NEMOGCM/SETTE/all_functions.sh (modified) * trunk/NEMOGCM/SETTE/input_AMM12.cfg (modified) * trunk/NEMOGCM/SETTE/input_ISOMIP.cfg (modified) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM3.cfg (modified) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM3_AGRIF.cfg (copied) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM3_OBS.cfg (copied) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM3_PISCES.cfg (copied) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM_AGRIF.cfg (copied) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM_OBS.cfg (deleted) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM_PISCES.cfg (deleted) * trunk/NEMOGCM/SETTE/input_ORCA2_OFF_PISCES.cfg (modified) * trunk/NEMOGCM/SETTE/input_SAS.cfg (modified) * trunk/NEMOGCM/SETTE/iodef_sette.xml (modified) * trunk/NEMOGCM/SETTE/param.cfg (modified) * trunk/NEMOGCM/SETTE/prepare_exe_dir.sh (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) * trunk/NEMOGCM/SETTE/sette_rpt (modified) * trunk/NEMOGCM/SETTE/sette_rpt.sh (modified) * trunk/NEMOGCM/TOOLS/COMPILE/Fadd_keys.sh (modified) * trunk/NEMOGCM/TOOLS/COMPILE/Fcheck_archfile.sh (modified) * trunk/NEMOGCM/TOOLS/COMPILE/Fmake_config.sh (modified) * trunk/NEMOGCM/TOOLS/COMPILE/Fmake_extconfig.sh (modified) * trunk/NEMOGCM/TOOLS/COMPILE/bld_tools.cfg (modified) * trunk/NEMOGCM/TOOLS/COMPILE/tools.txt (modified) * trunk/NEMOGCM/TOOLS/DOMAINcfg (copied) * trunk/NEMOGCM/TOOLS/SIREN/Doxyfile (copied) * trunk/NEMOGCM/TOOLS/SIREN/README (modified) * trunk/NEMOGCM/TOOLS/SIREN/cfg/dimension.cfg (copied) * trunk/NEMOGCM/TOOLS/SIREN/cfg/dummy.cfg (modified) * trunk/NEMOGCM/TOOLS/SIREN/cfg/variable.cfg (modified) * trunk/NEMOGCM/TOOLS/SIREN/doc/refman.pdf (copied) * trunk/NEMOGCM/TOOLS/SIREN/src/Doxyfile (deleted) * trunk/NEMOGCM/TOOLS/SIREN/src/attribute.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/boundary.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_bathy.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_boundary.F90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_coord.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_meshmask.f90 (copied) * trunk/NEMOGCM/TOOLS/SIREN/src/create_restart.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/dimension.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/1_install.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/2_quickstart.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/3_support_bug.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/4_codingRules.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/5_changeLog.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/6_perio.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/main.dox (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/global.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/grid.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/grid_hgr.f90 (copied) * trunk/NEMOGCM/TOOLS/SIREN/src/grid_zgr.f90 (copied) * trunk/NEMOGCM/TOOLS/SIREN/src/iom.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/iom_cdf.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/lbc.f90 (copied) * trunk/NEMOGCM/TOOLS/SIREN/src/merge_bathy.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/mpp.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/phycst.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/variable.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/vgrid.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/create_meshmask.nam (copied) * trunk/NEMOGCM/TOOLS/SIREN/templates/merge_bathy.nam (modified) * trunk/NEMOGCM/TRUST/inputs/AMM12/namelist_cfg (modified) * trunk/NEMOGCM/TRUST/inputs/GYRE/namelist_cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-amm12.cfg (modified) Merge of dev_merge_2016 into trunk. UPDATE TO ARCHFILES NEEDED for ... Tue, 08 Nov 2016 18:37:13 GMT mathiot [7212] * trunk (modified) * trunk/NEMOGCM (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) add iceberg in ORCA2-LIM3 configuration. Mon, 31 Oct 2016 15:49:42 GMT acc [7161] * trunk/NEMOGCM/TOOLS/MISCELLANEOUS/README_uspcfg (added) * trunk/NEMOGCM/TOOLS/MISCELLANEOUS/make_usp_tar.sh (added) #1790 Add make_usp_tar.sh and README_uspcfg to TOOLS/MISCELLANEOUS ... Tue, 25 Oct 2016 14:52:34 GMT lovato [7091] * trunk/NEMOGCM/NEMO/TOP_SRC/trcsub.F90 (modified) #1788 - trunk: bugfix for memory use association in trcsub Thu, 20 Oct 2016 10:27:37 GMT acc [7055] * trunk/NEMOGCM/NEMO/TOP_SRC/trcrst.F90 (modified) Trunk: Add IF(lwp) condition to diagnostic output in trcrst.F90 ... Thu, 20 Oct 2016 09:12:30 GMT emanuelaclementi [7048] * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfric.F90 (modified) #1768 Bug fixed in zdfric.F90 in trunk Wed, 05 Oct 2016 14:30:54 GMT nicolasmartin [6998] * trunk/DOC/TexFiles/Preamble.tex (added) * trunk/DOC/TexFiles/Top_Matter.tex (added) TeX files missing from last commit Wed, 05 Oct 2016 14:26:13 GMT nicolasmartin [6997] * trunk/DOC/Figures (moved) * trunk/DOC/Figures/FIG_DOM_compare_coordinates_surface.eps (added) * trunk/DOC/Figures/Fig_ASM_obsdist_global.eps (added) * trunk/DOC/Figures/Fig_ASM_obsdist_local.eps (added) * trunk/DOC/Figures/Fig_BBL_adv.eps (added) * trunk/DOC/Figures/Fig_DYN_dynspg_ts.eps (added) * trunk/DOC/Figures/Fig_DYN_een_triad.eps (added) * trunk/DOC/Figures/Fig_GRIFF_MLB_triads.eps (added) * trunk/DOC/Figures/Fig_GRIFF_bdry_triads.eps (added) * trunk/DOC/Figures/Fig_GRIFF_qcells.eps (added) * trunk/DOC/Figures/Fig_GRIFF_triad_fluxes.eps (added) * trunk/DOC/Figures/Fig_GYRE.eps (added) * trunk/DOC/Figures/Fig_Gibraltar.eps (added) * trunk/DOC/Figures/Fig_Gibraltar2.eps (added) * trunk/DOC/Figures/Fig_IPSL_bande.eps (added) * trunk/DOC/Figures/Fig_ISO_triad.eps (added) * trunk/DOC/Figures/Fig_IV_adv_MUSCL.eps (added) * trunk/DOC/Figures/Fig_IV_adv_flx.eps (added) * trunk/DOC/Figures/Fig_I_earth_referential.eps (added) * trunk/DOC/Figures/Fig_I_ocean_bc.eps (added) * trunk/DOC/Figures/Fig_LBC_bdy_geom.eps (added) * trunk/DOC/Figures/Fig_LBC_jperio.eps (added) * trunk/DOC/Figures/Fig_LBC_nc_header.eps (added) * trunk/DOC/Figures/Fig_LBC_shlat.eps (added) * trunk/DOC/Figures/Fig_LBC_uv.eps (added) * trunk/DOC/Figures/Fig_LBC_zoom.eps (added) * trunk/DOC/Figures/Fig_LDF_ZDF1.eps (added) * trunk/DOC/Figures/Fig_MLF_forcing.eps (added) * trunk/DOC/Figures/Fig_North_Fold_T.eps (added) * trunk/DOC/Figures/Fig_OBS_dataplot_main.eps (added) * trunk/DOC/Figures/Fig_OBS_dataplot_prof.eps (added) * trunk/DOC/Figures/Fig_ORCA2_NH_mesh.eps (added) * trunk/DOC/Figures/Fig_ORCA_NH_mesh.eps (added) * trunk/DOC/Figures/Fig_ORCA_NH_msh05_e1_e2.eps (added) * trunk/DOC/Figures/Fig_ORCA_aniso.eps (added) * trunk/DOC/Figures/Fig_SBC_air_sea.eps (added) * trunk/DOC/Figures/Fig_SBC_dcy.eps (added) * trunk/DOC/Figures/Fig_SBC_diurnal.eps (added) * trunk/DOC/Figures/Fig_SBC_isf.eps (added) * trunk/DOC/Figures/Fig_TRA_Irradiance.eps (added) * trunk/DOC/Figures/Fig_TRA_geoth.eps (added) * trunk/DOC/Figures/Fig_TimeStepping_flowchart.eps (added) * trunk/DOC/Figures/Fig_ZDF_M2_K1_tmx.eps (added) * trunk/DOC/Figures/Fig_ZDF_TKE_time_scheme.eps (added) * trunk/DOC/Figures/Fig_adv_scheme.eps (added) * trunk/DOC/Figures/Fig_cell.eps (added) * trunk/DOC/Figures/Fig_cla.eps (added) * trunk/DOC/Figures/Fig_eiv_slp.eps (added) * trunk/DOC/Figures/Fig_hgr.eps (added) * trunk/DOC/Figures/Fig_index_hor.eps (added) * trunk/DOC/Figures/Fig_index_vert.eps (added) * trunk/DOC/Figures/Fig_mask_subasins.eps (added) * trunk/DOC/Figures/Fig_mixing_length.eps (added) * trunk/DOC/Figures/Fig_mpp.eps (added) * trunk/DOC/Figures/Fig_mppini2.eps (added) * trunk/DOC/Figures/Fig_npc.eps (added) * trunk/DOC/Figures/Fig_overlap.eps (added) * trunk/DOC/Figures/Fig_sco_function.eps (added) * trunk/DOC/Figures/Fig_z_zps_s_sps.eps (added) * trunk/DOC/Figures/Fig_z_zstar.eps (added) * trunk/DOC/Figures/Fig_z_zstar_s.eps (added) * trunk/DOC/Figures/Fig_z_zstar_s2.eps (added) * trunk/DOC/Figures/Fig_zdfddm.eps (added) * trunk/DOC/Figures/Fig_zgr.eps (added) * trunk/DOC/Figures/Fig_zgr_e3.eps (added) * trunk/DOC/Figures/NEMO_logo.eps (added) * trunk/DOC/Figures/NEMO_logo_Black.eps (added) * trunk/DOC/Figures/Partial_step_scheme.eps (added) * trunk/DOC/Figures/bathy_idl_z_zps_s.eps (added) * trunk/DOC/Figures/logo_ALL.eps (added) * trunk/DOC/Figures/logo_CMCC.eps (added) * trunk/DOC/Figures/logo_CNRS.eps (added) * trunk/DOC/Figures/logo_MERCATOR.eps (added) * trunk/DOC/Figures/logo_NERC.eps (added) * trunk/DOC/Figures/logo_UKMO.eps (added) * trunk/DOC/Figures/nemo_text_essai.eps (added) * trunk/DOC/LaTeX2HTML.sh (added) * trunk/DOC/NEMO_book.pdf (deleted) * trunk/DOC/NEMO_book.tex (modified) * trunk/DOC/NEMO_coding.conv.pdf (deleted) * trunk/DOC/NEMO_coding.conv.tex (modified) * trunk/DOC/Namelists (moved) * trunk/DOC/Namelists/nam_asminc (modified) * trunk/DOC/Namelists/nam_dia25h (modified) * trunk/DOC/Namelists/nam_diaharm (modified) * trunk/DOC/Namelists/nam_diatmb (modified) * trunk/DOC/Namelists/nam_tide (modified) * trunk/DOC/Namelists/nam_vvl (modified) * trunk/DOC/Namelists/nambbl (modified) * trunk/DOC/Namelists/nambdy_dta (modified) * trunk/DOC/Namelists/nambdy_tide (modified) * trunk/DOC/Namelists/namberg (modified) * trunk/DOC/Namelists/nambfr (modified) * trunk/DOC/Namelists/namcfg_orca1 (copied) * trunk/DOC/Namelists/namdct (modified) * trunk/DOC/Namelists/namdiu (modified) * trunk/DOC/Namelists/namdyn_vor (modified) * trunk/DOC/Namelists/namelist_dmp (copied) * trunk/DOC/Namelists/nameos (modified) * 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trunk/DOC/TexFiles/Chapters/Chap_DYN.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LDF.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_MISC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_Model_Basics.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_Model_Basics_zstar.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_OBS.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_STO.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_STP.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_TRA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_ZDF.tex (modified) * trunk/DOC/TexFiles/Chapters/Introduction.tex (modified) * trunk/DOC/TexFiles/Namelist_tools (deleted) * trunk/DOC/TexFiles/Styles (added) * trunk/DOC/TexFiles/Styles/NEMO.ist (moved) * trunk/DOC/TexFiles/Styles/ametsoc.bst (moved) * trunk/DOC/TexFiles/Styles/math_abbrev.sty (moved) * trunk/DOC/clean.sh (moved) * trunk/DOC/namelist_split.sh (moved) Duplication of changes in DOC directory for the trunk Tue, 04 Oct 2016 12:34:18 GMT nicolasmartin [6981] * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diadct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domain.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/timing.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) Bugfixes for compilation issues : last commit for trcstp and gfortran ... Mon, 03 Oct 2016 06:39:14 GMT cetlod [6968] * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) trunk: minor bgufix on trcstp, see ticket #1173 Thu, 29 Sep 2016 14:46:06 GMT cetlod [6962] * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) trunk: Bugfix on PISCES to avoid compilation errors, see ticket #1779 Mon, 26 Sep 2016 08:50:16 GMT jamesharle [6954] * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) correcting misnamed variable in trcstp: nb_rec_per_day was declared as ... Fri, 23 Sep 2016 10:31:28 GMT cetlod [6945] * trunk/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlim.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlys.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zrem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) trunk: bugfixes on PISCES carbon chemistry, see ticket #1774 Fri, 23 Sep 2016 09:44:14 GMT cetlod [6942] * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) trunk: bugfix on TOP restartability with vvl and/or with diurnal cycle, ... Tue, 06 Sep 2016 13:02:44 GMT flavoni [6918] * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) #1763, commit in trunk, same of 3_6_STABLE, line over 132 chars Tue, 26 Jul 2016 08:42:58 GMT jchanut [6819] * trunk/NEMOGCM/TOOLS/NESTING/agulhas (modified) * trunk/NEMOGCM/TOOLS/NESTING/src/agrif_types.f90 (modified) pa2 not read in nesting tools, ticket #1583 Thu, 21 Jul 2016 09:04:56 GMT mathiot [6814] * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbini.F90 (modified) correction related to ticket #1588 (ICB fails on large core counts) ... Thu, 21 Jul 2016 09:04:14 GMT mathiot [6813] * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_core.F90 (modified) add diurnal cycle in case of CICE (trunk) Fri, 01 Jul 2016 14:53:13 GMT mathiot [6771] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) Add ztrs surface initialisation in traadv_tvd_zts in the trunk, as ... Wed, 29 Jun 2016 16:34:37 GMT jchanut [6759] * trunk/NEMOGCM/NEMO/NST_SRC/agrif_lim2_interp.F90 (modified) AGRIF and LIM2 bug, ticket #1754 Wed, 29 Jun 2016 08:41:47 GMT jchanut [6752] * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf_imp.F90 (modified) Mask vtau in dynzdf_imp, ticket #1744 Wed, 29 Jun 2016 08:04:05 GMT jchanut [6750] * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynadv_cen2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynadv_ubs.F90 (modified) Reproducibility issue with flux form advection, ticket #1749 Sat, 18 Jun 2016 10:59:10 GMT clem [6722] * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) correct bugs in the coupling ice-ocean-atm (with LIM3) Tue, 14 Jun 2016 13:24:49 GMT clem [6711] * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) correct a bug in coupled mode in case calving is activated Mon, 13 Jun 2016 15:29:32 GMT lovato [6701] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcdmp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) #1677 - trunk: Update code for passive tracers data input and restoring Mon, 13 Jun 2016 14:52:57 GMT clem [6695] * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) remove useless and annoying prints Mon, 13 Jun 2016 14:37:49 GMT flavoni [6691] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) #1742, commit correction on advection scheme FCT Mon, 13 Jun 2016 14:24:43 GMT flavoni [6689] * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domwri.F90 (modified) #1753, commit mesh_mask.nc all fields in double precision now Fri, 03 Jun 2016 13:44:55 GMT cetlod [6665] * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diaar5.F90 (modified) trunk:bugfix on diaar5 routine to read salinity input file on model ... Thu, 26 May 2016 09:54:20 GMT cetlod [6628] * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) trunk:Bugfix on phytoplankton growth in PISCES, see ticket #1732 Wed, 25 May 2016 14:40:11 GMT davestorkey [6623] * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbrst.F90 (modified) Reversing previous unintended change to icbrst.F90. Wed, 25 May 2016 14:24:04 GMT davestorkey [6622] * trunk/NEMOGCM/NEMO/OPA_SRC/ICB/icbrst.F90 (modified) * trunk/NEMOGCM/TOOLS/REBUILD_NEMO/icb_combrest.py (modified) Bug fix for icb_combrest.py. See ticket #1708. Wed, 25 May 2016 12:52:53 GMT cetlod [6619] * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) Minor bug correction, see ticket #1667 Mon, 23 May 2016 15:18:38 GMT cetlod [6607] * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcdmp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) trunk:bugfix on passive tracers restoring ; the previous one was not ... Thu, 12 May 2016 09:23:19 GMT lovato [6522] * trunk/NEMOGCM/ARCH/CMCC/arch-ifort_athena_xios.fcm (modified) Update CMCC arch file for xios Wed, 11 May 2016 10:50:34 GMT timgraham [6519] * trunk/NEMOGCM/NEMO/OPA_SRC/IOM/iom.F90 (modified) #1725 - pass correct start time to XIOS. Sun, 01 May 2016 16:11:06 GMT gm [6505] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) #1722 - trunk: TEOS-10 freezing point bug correction Sun, 01 May 2016 14:19:48 GMT gm [6504] * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) #1687 - trunk: correct an error in the EOS-80 freezing point Wed, 27 Apr 2016 07:33:46 GMT gm [6497] * trunk/DOC/TexFiles/Chapters/Chap_DIA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DOM.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_STO.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_TRA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_ZDF.tex (modified) * trunk/DOC/TexFiles/Namelist/namzdf_tmx_new (added) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) #1720 - trunk: add Casimir tidal parameterization Fri, 22 Apr 2016 13:52:52 GMT mathiot [6493] * trunk/NEMOGCM/NEMO/OPA_SRC/DIU/cool_skin.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lbclnk.F90 (modified) add lbc_sum interface + USE lib_mpi in cool_skin if key_mpi_mpp not ... Fri, 22 Apr 2016 13:04:31 GMT mathiot [6492] * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) Initialisation of misfdep/risfdep in case ln_zco activated + check ... Wed, 20 Apr 2016 14:55:58 GMT mcastril [6490] * trunk (modified) * trunk/NEMOGCM (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lbclnk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) Merging of branch dev_r5546_CNRS19_HPC_scalability Wed, 20 Apr 2016 12:26:29 GMT timgraham [6489] * trunk/NEMOGCM/CONFIG/AMM12/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/C1D_PAPA/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_BFM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/1_namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM_CFC_C14b/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_OFF_PISCES/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/ORCA2_SAS_LIM/EXP00/namelist_cfg (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfric.F90 (modified) #1687 fixed. Namelist changes required. Tue, 19 Apr 2016 15:11:00 GMT mcastril [6483] * trunk (modified) * trunk/NEMOGCM (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lbclnk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) Revert last changes in the trunk Fri, 15 Apr 2016 16:43:21 GMT mcastril [6478] * trunk (modified) * trunk/NEMOGCM (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limhdf.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lbclnk.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/lib_mpp.F90 (modified) Merging of branch dev_r5546_CNRS19_HPC_scalability #1539 Wed, 13 Apr 2016 15:41:57 GMT lovato [6472] * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) Include output of runoff term on SST and SSS in TRA/trasbc.F90 (#1650) Wed, 13 Apr 2016 15:41:02 GMT clem [6470] * trunk/NEMOGCM/NEMO/LIM_SRC_3/limistate.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_dh.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_sal.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limvar.F90 (modified) solve issue #1712 Mon, 11 Apr 2016 11:09:42 GMT pabouttier [6464] * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Add restarting functionality for stochastic parametrization parameters; ... Fri, 08 Apr 2016 16:00:29 GMT lovato [6460] * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) Move runoff fields time swap in sbcmod (#1703) and change SETTE path ... Thu, 07 Apr 2016 16:19:52 GMT davestorkey [6447] * trunk/NEMOGCM/TOOLS/REBUILD_NEMO/icb_combrest.py (modified) Bug fix for bug fix to TOOLS/REBUILD_NEMO/icb_combrest.py See ticket ... Tue, 05 Apr 2016 08:12:33 GMT davestorkey [6423] * trunk/NEMOGCM/TOOLS/MISCELLANEOUS/icb_pp.py (modified) * trunk/NEMOGCM/TOOLS/REBUILD_NEMO/icb_combrest.py (modified) 1. Bug fix for icb_combrest.py. Will now cope with a set of iceberg ... Mon, 04 Apr 2016 10:12:15 GMT cetlod [6421] * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsms.F90 (modified) trunk : bugfix in PISCES bottom boundary condition, see ticket #1707 Fri, 01 Apr 2016 14:09:01 GMT clem [6418] * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdiahsb.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limwri.F90 (modified) add ice output for salt flux from sublimation Fri, 01 Apr 2016 12:22:17 GMT clem [6416] * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ice_lim3_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limcons.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limdiahsb.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limitd_me.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limrhg.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limsbc.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_dh.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_lac.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limvar.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limwri.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/thd_ice.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/albedo.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbc_ice.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_clio.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_core.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) phase trunk with new additions on LIM3 from 3.6 stable (r6398 r6399 and ... Fri, 01 Apr 2016 08:06:07 GMT lovato [6414] * trunk/NEMOGCM/TOOLS/REBUILD_NEMO/src/rebuild_nemo.f90 (modified) Update rebuild_nemo: include error exit code 9 (#1460) and zero fill of ... Thu, 31 Mar 2016 16:22:32 GMT lovato [6412] * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/mppini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/LBC/mppini_2.h90 (modified) * trunk/NEMOGCM/TOOLS/MPP_PREP/src/mpp_optimiz_zoom_nc.f90 (modified) * trunk/NEMOGCM/TOOLS/MPP_PREP/src/mppopt_showproc_nc.f90 (modified) Revise domain decomposition with land PEs exclusion (see ticket #1704) Wed, 30 Mar 2016 15:10:02 GMT lovato [6409] * trunk/DOC/NEMO_book.pdf (modified) * trunk/DOC/TexFiles/Figures/logo_ALL.pdf (modified) * trunk/DOC/TexFiles/Figures/logo_CMCC.pdf (added) * trunk/NEMOGCM/ARCH/CMCC/arch-ifort_athena_xios.fcm (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-athena-xios (deleted) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-gfortran_athena_xios (deleted) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena_xios (modified) Update CMCC DOC logo, SETTE scripts and arch files. Fri, 25 Mar 2016 16:24:35 GMT cetlod [6403] * trunk/NEMOGCM/CONFIG/SHARED/namelist_ice_lim3_ref (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_top_ref (modified) * trunk/NEMOGCM/CONFIG/cfg.txt (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/ice.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limcons.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limthd_lac.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limtrp.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate1.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/limupdate2.F90 (modified) * trunk/NEMOGCM/NEMO/LIM_SRC_3/thd_ice.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcldf.F90 (modified) trunk:new developments already included in 3.6 stable, see points 1, 2 ... Thu, 17 Mar 2016 09:16:03 GMT jpaul [6393] * trunk/NEMOGCM/TOOLS/SIREN/cfg/dummy.cfg (added) * trunk/NEMOGCM/TOOLS/SIREN/cfg/variable.cfg (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/Doxyfile (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/attribute.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/boundary.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_bathy.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_boundary.F90 (moved) * trunk/NEMOGCM/TOOLS/SIREN/src/create_coord.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/create_restart.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/dimension.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/1_install.md (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/2_quickstart.md (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/3_support_bug.md (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/4_codingRules.md (moved) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/5_changeLog.md (moved) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/6_perio.md (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_glob_band_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_glob_band_30.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_glob_over_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_glob_over_30.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_zoom_40.png (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/grid_zoom_60.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio0_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio1_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio2_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio3_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio4_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio5_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/Image/perio6_20.png (added) * trunk/NEMOGCM/TOOLS/SIREN/src/docsrc/main.dox (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/domain.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/file.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/function.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/global.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/grid.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/interp_linear.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/iom_cdf.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/iom_dom.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/iom_mpp.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/iom_rstdimg.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/logger.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/math.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/merge_bathy.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/mpp.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/multi.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/phycst.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/variable.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/src/vgrid.f90 (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/create_bathy.nam (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/create_boundary.nam (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/create_coord.nam (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/create_restart.nam (modified) * trunk/NEMOGCM/TOOLS/SIREN/templates/merge_bathy.nam (modified) commit changes/bugfix/... for SIREN; see ticket #1700 Mon, 14 Mar 2016 15:18:13 GMT cetlod [6387] * trunk/NEMOGCM/ARCH/arch-macport_osx.fcm (modified) * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) trunk: bugfix related to the wrong name of vertical scale factor, see ... Fri, 11 Mar 2016 13:51:05 GMT timgraham [6385] * trunk/NEMOGCM/TOOLS/DMP_TOOLS/src/zoom.F90 (modified) #1693: Delete erroneous call to timing_start.F90 Thu, 10 Mar 2016 14:12:49 GMT acc [6381] * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) Trunk only. #1691 Add missing call to ldf_dyn in step.F90 needed for ... Wed, 24 Feb 2016 18:52:54 GMT mathiot [6352] * trunk/NEMOGCM/NEMO/OPA_SRC/LDF/ldfslp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) Fixe ticket #1662 about slope limitiation beneath an ice shelf in trunk Wed, 24 Feb 2016 18:50:11 GMT cetlod [6351] * trunk/NEMOGCM/CONFIG/SHARED/field_def.xml (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DIA/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) trunk: move the output of scale factor before time swapping and output ... Thu, 18 Feb 2016 08:41:18 GMT cetlod [6325] * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90 (modified) trunk : bugfix on the calculation of rdenit coefficient in PISCES model, ... Wed, 17 Feb 2016 15:24:34 GMT mathiot [6320] * trunk/DOC/TexFiles/Biblio/Biblio.bib (modified) * trunk/DOC/TexFiles/Chapters/Chap_DOM.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DYN.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_TRA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_ZDF.tex (modified) ISF: update documentation Fri, 12 Feb 2016 11:47:24 GMT cetlod [6309] * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcdmp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trctrp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) trunk : bugfix on passive tracers damping, see ticket #1677 Fri, 05 Feb 2016 04:51:35 GMT cetlod [6291] * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zlys.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/sms_pisces.F90 (modified) trunk : bugfix on PISCES carbonate chemistry, see ticket #1672 Thu, 04 Feb 2016 23:47:05 GMT gm [6289] * trunk/DOC/NEMO_book.pdf (modified) * trunk/DOC/NEMO_book.tex (modified) * trunk/DOC/TexFiles/Biblio/Biblio.bib (modified) * trunk/DOC/TexFiles/Chapters/Abstracts_Foreword.tex (modified) * trunk/DOC/TexFiles/Chapters/Annex_C.tex (modified) * trunk/DOC/TexFiles/Chapters/Annex_D.tex (modified) * trunk/DOC/TexFiles/Chapters/Annex_ISO.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DIA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DIU.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DOM.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DYN.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LDF.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_MISC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_Model_Basics.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_STO.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_TRA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_ZDF.tex (modified) * trunk/DOC/TexFiles/Chapters/Introduction.tex (modified) * trunk/DOC/TexFiles/Figures/Fig_obc_north.pdf (deleted) * trunk/DOC/TexFiles/Namelist/nam_asminc (added) * trunk/DOC/TexFiles/Namelist/nam_dia25h (modified) * trunk/DOC/TexFiles/Namelist/nam_diaharm (added) * trunk/DOC/TexFiles/Namelist/nam_diatmb (modified) * trunk/DOC/TexFiles/Namelist/nam_dmp_create (deleted) * trunk/DOC/TexFiles/Namelist/nam_vvl (added) * trunk/DOC/TexFiles/Namelist/namasm (deleted) * trunk/DOC/TexFiles/Namelist/nambbc (added) * trunk/DOC/TexFiles/Namelist/nambdy_dta2 (deleted) * trunk/DOC/TexFiles/Namelist/nambdy_index (deleted) * trunk/DOC/TexFiles/Namelist/nambdy_tide (modified) * trunk/DOC/TexFiles/Namelist/namberg (modified) * trunk/DOC/TexFiles/Namelist/namc1d (added) * trunk/DOC/TexFiles/Namelist/namc1d_dyndmp (added) * trunk/DOC/TexFiles/Namelist/namc1d_uvd (added) * trunk/DOC/TexFiles/Namelist/namcfg (added) * trunk/DOC/TexFiles/Namelist/namcla (deleted) * trunk/DOC/TexFiles/Namelist/namcrs (added) * trunk/DOC/TexFiles/Namelist/namctl (modified) * trunk/DOC/TexFiles/Namelist/namdia_harm (deleted) * trunk/DOC/TexFiles/Namelist/namdiu (modified) * trunk/DOC/TexFiles/Namelist/namdom (modified) * trunk/DOC/TexFiles/Namelist/namdyn_nept (deleted) * trunk/DOC/TexFiles/Namelist/namdyn_vor (modified) * trunk/DOC/TexFiles/Namelist/nammpp_dyndist (deleted) * trunk/DOC/TexFiles/Namelist/namobc (deleted) * trunk/DOC/TexFiles/Namelist/namobs (modified) * trunk/DOC/TexFiles/Namelist/namrun (modified) * trunk/DOC/TexFiles/Namelist/namsbc (modified) * trunk/DOC/TexFiles/Namelist/namsbc_iscpl (modified) * trunk/DOC/TexFiles/Namelist/namsbc_isf (modified) * trunk/DOC/TexFiles/Namelist/namsol (deleted) * trunk/DOC/TexFiles/Namelist/namsplit (deleted) * trunk/DOC/TexFiles/Namelist/namsto (added) * trunk/DOC/TexFiles/Namelist/namtra_adv_mle (added) * trunk/DOC/TexFiles/Namelist/namtra_bbc (deleted) * trunk/DOC/TexFiles/Namelist/namtra_ldf (modified) * trunk/DOC/TexFiles/Namelist/namtra_ldfeiv (added) * trunk/DOC/TexFiles/Namelist/namwad (added) * trunk/DOC/TexFiles/Namelist/namzdf_kpp (deleted) * trunk/DOC/TexFiles/Namelist/namzdf_ric (modified) * trunk/DOC/TexFiles/Namelist_tools (added) * trunk/DOC/TexFiles/Namelist_tools/namcfg_orca1 (moved) * trunk/DOC/TexFiles/Namelist_tools/namelist_dmp (added) * trunk/DOC/TexFiles/Namelist_tools/namobs_example (moved) * trunk/DOC/TexFiles/namelist_split.sh (added) #1673 DOC of the trunk - Update, see associated wiki page for ... Thu, 07 Jan 2016 15:13:44 GMT timgraham [6222] * trunk/NEMOGCM/TRUST (added) * trunk/NEMOGCM/TRUST/batch (added) * trunk/NEMOGCM/TRUST/batch/X64_ADA.sh (added) * trunk/NEMOGCM/TRUST/batch/X64_CURIE.sh (added) * trunk/NEMOGCM/TRUST/config (added) * trunk/NEMOGCM/TRUST/config/X64_ADA.cfg (added) * trunk/NEMOGCM/TRUST/config/X64_CURIE.cfg (added) * trunk/NEMOGCM/TRUST/config/arch_template.cfg (added) * trunk/NEMOGCM/TRUST/config/martin.cfg (added) * trunk/NEMOGCM/TRUST/config/romr005.cfg (added) * trunk/NEMOGCM/TRUST/config/user_template.cfg (added) * trunk/NEMOGCM/TRUST/cron (added) * trunk/NEMOGCM/TRUST/cron/ada.env (added) * trunk/NEMOGCM/TRUST/cron/curie.env (added) * trunk/NEMOGCM/TRUST/inc (added) * trunk/NEMOGCM/TRUST/inc/banner.html (added) * trunk/NEMOGCM/TRUST/inc/banner.txt (added) * trunk/NEMOGCM/TRUST/inc/svn_abstract.awk (added) * trunk/NEMOGCM/TRUST/inc/trusting.env (added) * trunk/NEMOGCM/TRUST/inc/trusting_func.sh (added) * trunk/NEMOGCM/TRUST/inc/trusting_help.txt (added) * trunk/NEMOGCM/TRUST/inputs (added) * trunk/NEMOGCM/TRUST/inputs/AMM12 (added) * trunk/NEMOGCM/TRUST/inputs/AMM12/iodef.xml (added) * trunk/NEMOGCM/TRUST/inputs/AMM12/namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/C1D_PAPA (added) * trunk/NEMOGCM/TRUST/inputs/GYRE (added) * trunk/NEMOGCM/TRUST/inputs/GYRE/iodef.xml (added) * trunk/NEMOGCM/TRUST/inputs/GYRE/namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/GYRE_BFM (added) * trunk/NEMOGCM/TRUST/inputs/GYRE_PISCES (added) * trunk/NEMOGCM/TRUST/inputs/GYRE_XIOS (added) * trunk/NEMOGCM/TRUST/inputs/O1L3P_trust (added) * trunk/NEMOGCM/TRUST/inputs/ORCA1_LIM3_PISCES (added) * trunk/NEMOGCM/TRUST/inputs/ORCA1_LIM3_PISCES/namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA1_LIM3_PISCES/namelist_ice_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM/1_namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM/namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM3 (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_CFC_C14b (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/iodef.xml (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/namelist_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/namelist_pisces_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_LIM_PISCES/namelist_top_cfg (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_OFF_PISCES (added) * trunk/NEMOGCM/TRUST/inputs/ORCA2_SAS_LIM (added) * trunk/NEMOGCM/TRUST/install_new_branch.sh (added) * trunk/NEMOGCM/TRUST/trusting.sh (added) * trunk/NEMOGCM/TRUST/web (added) * trunk/NEMOGCM/TRUST/web/html (added) * trunk/NEMOGCM/TRUST/web/html/images (added) * trunk/NEMOGCM/TRUST/web/html/images/blank.png (added) * trunk/NEMOGCM/TRUST/web/html/images/downsimple.png (added) * trunk/NEMOGCM/TRUST/web/html/images/folder.png (added) * trunk/NEMOGCM/TRUST/web/html/images/upsimple.png (added) * trunk/NEMOGCM/TRUST/web/html/sortabletable.css (added) * trunk/NEMOGCM/TRUST/web/html/sortabletable.js (added) * trunk/NEMOGCM/TRUST/web/html/tab-view.css (added) * trunk/NEMOGCM/TRUST/web/html/tab-view.js (added) * trunk/NEMOGCM/TRUST/web/images (added) * trunk/NEMOGCM/TRUST/web/images/close.gif (added) * trunk/NEMOGCM/TRUST/web/images/close_over.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_left_active.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_left_inactive.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_left_over.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_right_active.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_right_inactive.gif (added) * trunk/NEMOGCM/TRUST/web/images/tab_right_over.gif (added) * trunk/NEMOGCM/TRUST/web/index.html (added) * trunk/NEMOGCM/TRUST/web/index.php (added) * trunk/NEMOGCM/TRUST/web/read_trusting.php (added) Reinstate TRUSTING directory as it was accidentally deleted at r6140. Tue, 05 Jan 2016 13:39:12 GMT acc [6210] * trunk/NEMOGCM/CONFIG/uspcfg.txt (modified) Add IRISHSEA unsupported configuration details to uspcfg.txt to enable ... Tue, 05 Jan 2016 09:41:58 GMT timgraham [6209] * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdmxl_oce.F90 (modified) Fix for ticket #1659 Wed, 23 Dec 2015 19:23:54 GMT mocavero [6165] * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/nemogcm.F90 (modified) un,vn allocation, see ticket #1615 Mon, 21 Dec 2015 22:33:57 GMT acc [6152] * trunk/NEMOGCM/ARCH/arch-X64_MOBILIS.fcm (modified) * trunk/NEMOGCM/CONFIG/SHARED/namelist_ref (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domvvl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DOM/domzgr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynhpg.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynspg_ts.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/sshwzv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/wet_dry.F90 (added) * trunk/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/SETTE/sette_rpt.sh (modified) Add wetting and drying option from dev_r5803_NOC_WAD branch. Logically ... Mon, 21 Dec 2015 12:01:23 GMT timgraham [6143] * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_prof_io.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_sla_io.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_sla_types.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_vel_io.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obsprof_io.h90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obssla_io.h90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obssla_types.h90 (added) Commit to add files that have changed type in dev_merge_2015. Only ... Mon, 21 Dec 2015 11:58:28 GMT timgraham [6142] * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/in_out_manager.F90 (modified) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_prof_io.F90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_seaice_io.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_sla_io.F90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_sla_types.F90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_sst_io.F90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obs_vel_io.F90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obsprof_io.h90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obsseaice_io.h90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obssla_io.h90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obssla_types.h90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obssst_io.h90 (added) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/obsvel_io.h90 (deleted) * trunk/NEMOGCM/TOOLS/OBSTOOLS/src/par_oce.F90 (modified) Intermediate commit for OBSTOOLS directory changes from dev_merge_2015 ... Mon, 21 Dec 2015 11:35:23 GMT timgraham [6140] * trunk (modified) * trunk/DOC (modified) * trunk/DOC/NEMO_book.pdf (modified) * trunk/DOC/NEMO_book.tex (modified) * trunk/DOC/TexFiles/Biblio/Biblio.bib (modified) * trunk/DOC/TexFiles/Chapters/Abstracts_Foreword.tex (modified) * trunk/DOC/TexFiles/Chapters/Annex_C.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DIA.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DIU.tex (copied) * trunk/DOC/TexFiles/Chapters/Chap_DOM.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_DYN.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_LDF.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_Model_Basics.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_Model_Basics_zstar.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_OBS.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_SBC.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_STP.tex (modified) * trunk/DOC/TexFiles/Chapters/Chap_TRA.tex (modified) * trunk/DOC/TexFiles/Chapters/Introduction.tex 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trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obs_sstbias.F90 (copied) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obs_surf_def.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obs_types.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obs_vel_io.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obs_write.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obsprof_io.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obsseaice_io.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obssla_io.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obssla_types.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obssst_io.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/OBS/obsvel_io.h90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/fldread.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/geo2ocean.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbc_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcana.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcapr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_core.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcblk_mfs.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbccpl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcdcy.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcflx.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcfwb.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_cice.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_if.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcice_lim_2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcisf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcmod.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcrnf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcssr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbctide.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/sbcwave.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/SBC/tideini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/eosbn2.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_cen.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_fct.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mle.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_mus.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_qck.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traadv_ubs.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trabbl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tradmp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_blp.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_iso.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_lap.F90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_lap_blp.F90 (copied) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traldf_triad.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tranpc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/tranxt.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/traqsr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trasbc.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_exp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/trazdf_imp.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRA/zpshde.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trd_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trddyn.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdglo.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdini.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdken.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdmxl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdmxl_rst.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdpen.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdtra.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/TRD/trdvor.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfbfr.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfddm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfevd.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfgls.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfmxl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdfric.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftke.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/ZDF/zdftmx.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/lib_fortran.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/lib_print.f90 (deleted) * trunk/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/step_oce.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/stpctl.F90 (modified) * trunk/NEMOGCM/NEMO/OPA_SRC/trc_oce.F90 (modified) * trunk/NEMOGCM/NEMO/SAO_SRC (copied) * trunk/NEMOGCM/NEMO/SAS_SRC/daymod.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/diawri.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/nemogcm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/sbcssm.F90 (modified) * trunk/NEMOGCM/NEMO/SAS_SRC/step.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/C14b/trcsms_c14b.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/CFC/trcsms_cfc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcsms_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/MY_TRC/trcwri_my_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zexp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P2Z/p2zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zbio.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zche.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zfechem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zflx.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zopt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zprod.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zrem.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsed.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsink.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zsms.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/SED/sedrst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/PISCES/trcwri_pisces.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcadv.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcdmp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcldf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcnxt.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trcsbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trctrp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trczdf.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdmxl_trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/TRP/trdmxl_trc_rst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcbc.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcbdy.F90 (copied) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdia.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcdta.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcini.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcnam.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcrst.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcstp.F90 (modified) * trunk/NEMOGCM/NEMO/TOP_SRC/trcsub.F90 (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-XC40_METO (modified) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena (copied) * trunk/NEMOGCM/SETTE/BATCH_TEMPLATE/batch-ifort_athena_xios (copied) * trunk/NEMOGCM/SETTE/input_ORCA2_LIM.cfg (modified) * trunk/NEMOGCM/SETTE/prepare_job.sh (modified) * trunk/NEMOGCM/SETTE/sette.sh (modified) * trunk/NEMOGCM/SETTE/sette_rpt (modified) * trunk/NEMOGCM/SETTE/sette_rpt.sh (copied) * trunk/NEMOGCM/TOOLS/NESTING/src/agrif_create_restart.f90 (modified) * trunk/NEMOGCM/TOOLS/REBUILD_NEMO/icb_combrest.py (copied) * trunk/NEMOGCM/TOOLS/SCOORD_GEN (copied) * trunk/NEMOGCM/TOOLS/SIREN/cfg/variable.cfg (modified) * trunk/NEMOGCM/TRUST (deleted) * trunk/NEMOGCM/fcm-make/inc/keys-amm12.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-gyre.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-gyre_pisces.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-orca2_lim.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-orca2_lim3.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-orca2_lim_cfc.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-orca2_lim_pisces.cfg (modified) * trunk/NEMOGCM/fcm-make/inc/keys-orca2_sas_lim.cfg (modified) Merge of branches/2015/dev_merge_2015 back into trunk. Merge excludes ... Fri, 18 Dec 2015 13:54:06 GMT jchanut [6132] * trunk/NEMOGCM/NEMO/OPA_SRC/DYN/dynzdf.F90 (modified) Correct momentum vertical diffusion tendencies, #1584