Opened 8 years ago

Closed 8 years ago

#939 closed Defect (fixed)

opa fails to execute in ubuntu architecture

Reported by: MAMM Owned by: nemo
Priority: low Milestone: Unscheduled
Component: OCE Version: release-3.4
Severity: Keywords:



I have just installed NEMO in a computer running ubuntu. The serial version of the model installs and compiles well (both GYRE and ORCA2_LIM) but it fails to run, returning the following message:

undefined symbol for pthread_mutex_unlock_ptr

I have no idea of what this means. I have checked that there is no reference to pthread_mutex_unlock_ptr or pthread in the code. I would be grateful for any suggestion.


Miguel Angel

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comment:1 Changed 8 years ago by rkandilarov

What version of netcdf are you using? How is HDF5(if used compiled)?

Perhaps you have compiled the netcdf4 with HDF5 and in HDF5 you have "—with-pthread" and it is not in the default path in runtime… but then "ldd ./opa" should give you the idea what to search for… But I could be wrong…

I'm running NEMO on several ubuntu versions with netcdf4(self compiled) with both (HDF5 and no-HDF5) and it is working.

Rostislav Kandilarov

comment:2 Changed 8 years ago by clevy

  • Resolution set to fixed
  • Status changed from new to closed
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