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2011-03-09:

18:27 Changeset [2679] by rfurner

small bug fixes for bdy and vvl

17:23 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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17:17 2011WP/2011Stream2/Dynamic Memory edited by cetlod
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17:14 2011WP/2011Stream2/Dynamic Memory edited by kmogensen
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16:59 2011WP/2011Action_institutions_LOCEAN edited by cetlod
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16:58 2011WP/2011Action_institutions_LOCEAN edited by cetlod
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16:55 2011WP/2011Stream2/Dynamic Memory edited by rblod
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16:48 2011WP/2011Stream2/Dynamic Memory edited by rblod
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16:47 2011WP/2011Stream2/Dynamic Memory edited by rblod
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16:33 Dynamic_Memory_in_NEMO.pdf attached to 2011WP/2011Stream2/Dynamic Memory by rblod
Andrew Porter Presentation
16:02 Changeset [2678] by rblod

Phasing branch dev_r2586_dynamic_mem with revision 2675 off the trunk

15:39 Changeset [2677] by rblod

Commit in NST_SRC for agrif and dynamic memory

13:00 Changeset [2676] by rblod

Second set of change in OPA_SRC for compatibility with agrif

12:48 user/flavoni/compiling_AGRIF_pb edited by flavoni
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12:34 user/flavoni/compiling_AGRIF_pb edited by flavoni
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11:50 user/flavoni/compiling_AGRIF_pb edited by flavoni
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11:45 user/flavoni/compiling_AGRIF_pb created by flavoni
11:32 2011WP/2011Stream2 edited by davestorkey
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11:29 2011WP/2011Stream2 edited by davestorkey
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11:28 2011WP/2011Stream2 edited by davestorkey
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11:25 2011WP/2011Stream2 edited by davestorkey
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11:24 2011WP/2011Stream2 edited by davestorkey
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09:42 Changeset [2675] by flavoni

commit sette.sh ready to test 3 reference configuration: GYRE_LOBSTER, ORCA2_LIM_PISCES, POMME. (restartability and reproductibility tests), see ticket #752

2011-03-08:

18:30 Changeset [2674] by rblod

First set of changes in OPA_SRC to ensure AGRIF compatibility

17:44 Changeset [2673] by rblod

Update Agrif LIB on dev_r2586_dynamic_mem

15:08 Changeset [2672] by rblod

Tag vendors/AGRIF/current as vendors/AGRIF/r_01.

15:08 Changeset [2671] by rblod

Load working_directory into vendors/AGRIF/current.

10:41 Changeset [2670] by cetlod

suppression of useless key_nproci(j) CPP keys

10:38 Changeset [2669] by cetlod

offline:minor updates to take into account mpp improvement

2011-03-07:

20:14 Changeset [2668] by trackstand2

Added jpni, jpnj and jpnij to nammpp namelist. Suppressed nammpp_dyndist section.

17:17 Ticket #806 (in cpp_POMME.fcm there is one empty line) closed by flavoni
fixed
17:17 Changeset [2667] by flavoni

remove empty line in cpp_POMME.fcm ,see ticket #806

17:16 Ticket #806 (in cpp_POMME.fcm there is one empty line) created by flavoni
In cpp_POMME.fcm there is one empty line, this is a problem to use …
16:47 Changeset [2666] by cetlod

Offline: minor updates

16:26 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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15:42 Changeset [2665] by flavoni

add new functionality in SETTE, creating validation tree, and updated doc, see ticket #752

14:05 Changeset [2664] by trackstand2

Moved call to nemo_alloc() to after set-up of numout so wrk_nemo error output can use it.

14:05 Changeset [2663] by trackstand2

Changed which workspace arrays traadv_tvd uses to avoid clash in GYRE_LOBSTER

2011-03-05:

10:54 2011WP/2011Stream2/Dynamic Memory_improvments edited by gm
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10:52 Changeset [2662] by gm

dynamic mem: #785 ; suppress the need of logical work space (tradmp,wrk_nemo) + bug correction in the size of local 1d arry (tradmp). NB: llwrk_ functions can (should?) now be removed too

10:13 Changeset [2661] by gm

dynamic mem: #785 ; add key_no_workspace_check to by-pass the check in production runs

09:30 2011WP/2011Stream2/Dynamic Memory_improvments edited by gm
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09:19 Changeset [2660] by gm

dynamic mem: #785 ; re-Fixed bug in call to mpp_sum instead of ctl_warn in traldf and cla

2011-03-04:

19:20 Changeset [2659] by trackstand2

Fixed bug in call to ctl_warn in traldf

19:20 Changeset [2658] by trackstand2

Make jpk a variable rather than parameter

17:41 Changeset [2657] by flavoni

add comments in sette_beginner.sh, and added TEST_NAME in fcm_job.sh, see ticket #752

17:33 Changeset [2656] by flavoni

add sette_beginner.sh a small sette.sh to start with SETTE tools, see ticket #752

15:06 Changeset [2655] by cetlod

OFF_SRC:minor bug corrections

14:44 Changeset [2654] by cetlod

add compiler options for CCRT/NEC-SX8 computer

14:41 Changeset [2653] by cetlod

add compiler options for CCRT/NEC-SX8 computer

13:04 Changeset [2652] by cetlod

OFF_SRC/nemogcm.F90: minor changes on style

12:30 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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12:29 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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12:29 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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12:22 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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12:20 2011WP/2011Stream2/Dynamic Memory_improvments edited by cetlod
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12:04 Changeset [2651] by gm

dynamic mem: #785 ; minor changes, style mainly

11:52 Ticket #805 (mistake in some parameters of POMME namelist) closed by flavoni
fixed
11:51 Changeset [2650] by flavoni

correct bad cut & paste in POMME namelist, see ticket #805

11:50 Ticket #805 (mistake in some parameters of POMME namelist) created by flavoni
Probably bad cut and paste in POMME namelist
11:30 2011WP/2011Stream2/Dynamic Memory_improvments edited by gm
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2011-03-03:

19:45 Changeset [2649] by cetlod

small bug correction

17:44 2011WP/2011Stream2/Dynamic Memory_improvments created by gm
17:13 Changeset [2648] by cetlod

Changed OFF_SRC component to use dynamic memory

14:13 2011WP/2011Stream2/Dynamic Memory edited by gm
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13:48 Changeset [2647] by gm

dynamic mem: #785 ; OPA_SRC/OBC: move dyn allocation from nemogcm to obcini… (hopefully end)

13:24 Changeset [2646] by cetlod

Add missing lbclnk & correct a typo

11:14 Changeset [2645] by gm

dynamic mem: #785 ; correct small bug in dtatem & dtasal ierr3 not initialized, ierr2 should be set to 0

2011-03-02:

19:49 Changeset [2644] by cetlod

add a missing parenthesis in PISCES/p4zflx.F90 routine

19:38 Changeset [2643] by cetlod

Changed TOP/PISCES to use dynamic memory & improve the others TOP modules

19:32 Changeset [2642] by cetlod

Modify the routine zpshde.F90 to be able to run a biogeo model with no. of tracers > jpk

19:28 Changeset [2641] by cetlod

correct a typo in nemogcm.F90

19:28 Changeset [2640] by cetlod

remove unused functions llwrk_in_use/llwrk_not_released in albedo.F90 module

19:23 Changeset [2639] by cetlod

re-introduce missing allocated array

16:36 Changeset [2638] by trackstand2

Added USE lib_mpp for access to ctl_warn and ctl_stop

15:51 Ticket #804 (limdmp_2 probable bug) created by stortignauz
Hi, it seems to me that in limdmp_2.F90, line 72 of the trunk version, …
14:44 Changeset [2637] by flavoni

change debug test in st_namelist, see ticket #752

2011-03-01:

20:04 Changeset [2636] by gm

dynamic mem: #785 ; move ctl_stop & warn in lib_mpp to avoid a circular dependency + ctl_stop improvment

12:37 Changeset [2635] by trackstand2

wrk_use etc.: fixed bug in check on return value in loop

12:37 Changeset [2634] by trackstand2

Updated wrk_in_use and wrk_not_released routines to switch when they return TRUE/FALSE

2011-02-28:

18:23 Changeset [2633] by trackstand2

Renamed wrk_use ⇒ wrk_in_use and wrk_release ⇒ wrk_not_released

15:07 Changeset [2632] by trackstand2

Removed use of ctl_warn and ctl_stop from wrk_nemo to drop dependence on in_out_manager.

12:19 Changeset [2631] by trackstand2

geo2ocean - bug fix - missing ALLOCATABLE attribute and .NOT. on check on allocated status

12:19 Changeset [2630] by trackstand2

Changed TOP/C14b to use dynamic memory

08:58 Changeset [2629] by gm

dynamic mem: #785 ; TOP_SRC/TRD: move dyn allocation from nemogcm to trd… (continuation)

2011-02-27:

19:38 Changeset [2628] by gm

dynamic mem: #785 ; TOP_SRC: move dyn allocation from nemogcm to trcini (continuation)

18:52 Changeset [2627] by gm

dynamic mem: #785 ; OPA_SRC compilation without mpp

17:41 Changeset [2626] by gm

dynamic mem: #785 ; LIM_SRC_3 mpp compilation correct limthd.F90 ; LIM2 & 3: add a test of jpl/jpk in iceini

17:36 Changeset [2625] by gm

dynamic mem: #785 ; OPA_SRC mpp compilation: suppression of the USE in_out_manager in lib_mpp + style in DYN

17:33 Changeset [2624] by gm

dynamic mem: #785 ; SBC geo2ocean.F90 remove the optimization to ensure reproductibility

13:45 Changeset [2623] by gm

dynamic mem: #785 ; TRA: move dyn allocation from nemogcm to module when possible (continuation)

11:51 Changeset [2622] by gm

dynamic mem: #785 ; SOL: move dyn allocation from nemogcm to module when possible (continuation)

11:24 Changeset [2621] by gm

dynamic mem: #785 ; DYN: move dyn allocation from nemogcm to module when possible (continuation)

10:12 Changeset [2620] by gm

dynamic mem: #785 ; SBC: move dyn allocation from nemogcm to module when possible (continuation)

09:59 Changeset [2619] by gm

dynamic mem: #785 ; create e1e2t=e1t*e2t to simplify some dynamical allocation

2011-02-26:

13:31 Changeset [2618] by gm

dynamic mem: #785 ; move dyn allocation from nemogcm to module when possible (continuation)

11:34 Changeset [2617] by gm

dynamic mem: #785 ; zdfbfr allocation in zdf_bfr_init

11:28 Changeset [2616] by gm

dynamic mem: #785 ; move the allocation vertical physics from nemogcm to ZDF modules (compilation check using key_esopa)

2011-02-25:

17:33 Changeset [2615] by trackstand2

Fixed typo bugs that prevented compilation

17:33 Changeset [2614] by trackstand2

Changes in TOP/CFC for dynamic memory

11:45 Changeset [2613] by gm

dynamic mem: #785 ; move the allocation of ice in iceini_2/iceini module + bug fixes (define key_esopa)

11:43 Changeset [2612] by gm

dynamic mem: #785 ; LIM-3 case: changes required for compilation (continuation)

2011-02-23:

10:50 Changeset [2611] by trackstand2

Merged ldfslp.F90 bug fix (duplicate allocation of Madec arrays)

2011-02-22:

18:14 Changeset [2610] by trackstand2

Changes to keep Pathscale compiler happy

18:14 Changeset [2609] by trackstand2

Replaced local workspace arrays with those in wrk_nemo module

18:14 Changeset [2608] by trackstand2

Replaced local workspaces with wrk_nemo module in TOP_SRC/TRP routines.

18:14 Changeset [2607] by trackstand2

Made module arrays allocatable and added calls to _alloc()s in nemo_alloc()

18:14 Changeset [2606] by trackstand2

Module arrays made allocatable

13:21 Ticket #803 (Missing dummy routine in ldfslp.F90) closed by acc
fixed
13:21 Changeset [2605] by acc

v3.3 trunk. Introduce dummy ldf_slp_grif routine into ldfslp.F90 to fix linking failure if key_ldfslp is not active (#803).

13:17 Ticket #803 (Missing dummy routine in ldfslp.F90) created by acc
ldfslp.F90 is missing a dummy version of the ldf_slp_grif routine which …
13:17 Ticket #802 (Build process assumes creation of .mod files. Fails with Cray compiler.) created by trackstand
Unlike a lot of other Fortran compilers, it seems that the Cray compiler …
10:33 Changeset [2604] by cetlod

ipslcmip5:Formatted writting of total ocean carbon flux in ocean.output file

2011-02-21:

17:03 Ticket #801 (bad sed in add_key option of makenemo) closed by flavoni
fixed
17:03 Changeset [2603] by flavoni

replaced bad sed in add_key option, see ticket #801

17:02 Ticket #801 (bad sed in add_key option of makenemo) created by flavoni
Sed substitution in add_key option of makenemo does not work in some …
16:23 Changeset [2602] by cetlod

Improvment of surface boundary condition on trazdf_imp.F90 : minor bug correction+style, see ticket #800

12:53 Ticket #800 (bug in tra_zdf_imp.F90) created by poddo
In tra_zdf_imp.F90 The following statment zwt(:,:,:)=avt(:,:,:) wich is …

2011-02-20:

16:30 Changeset [2601] by gm

dynamic mem: #785 ; LIM-3 case: changes required for compilation

16:29 Changeset [2600] by gm

dynamic mem: #785 ; LIM-2 case: DOCTOR norm zfact changed in efact + style

16:02 Changeset [2599] by gm

dynamic mem: #785 ; LIM-3 case: DOCTOR norm alb_ice.. changed in zalb_ice…

15:56 Changeset [2598] by gm

dynamic mem: #785 ; LIM-3 case: add TARGET for 4D arrays + style

15:33 Changeset [2597] by gm

dynamic mem: #785 nemogcm error in LIM-3 case: lim_idt instead of lim_itd…

2011-02-18:

18:31 Changeset [2596] by trackstand2

Fixed typo in routine name

18:31 Changeset [2595] by trackstand2

Added calls to _alloc() routines for traldf_iso_grif and top-level TOP modules

18:31 Changeset [2594] by trackstand2

Removed F2003-only bounds-remapping and added _alloc routine instead

18:31 Changeset [2593] by trackstand2

Made module vars dynamic and added _alloc() routine

16:02 Changeset [2592] by rblod

Small correction for dynamic allocation in OPA_SRC

14:27 Ticket #799 (small conductivity bug) closed by gm
fixed: This is effectively a bug. The solution should also include a …
14:26 Changeset [2591] by gm

v3.3: #799 , correct a LIM3 small bug (limthd_dif)

13:49 Changeset [2590] by trackstand2

Merge branch 'dynamic_memory' into master-svn-dyn

2011-02-17:

18:02 Changeset [2589] by mafoipsl

Correction in diaptr as in [2571].

17:12 Changeset [2588] by trackstand2

Created branch for move to dynamic mem - ticket #785

14:57 Ticket #799 (small conductivity bug) created by dupontf
Hi all, In LIM3, NEMO3.3 (tag 2528) and lower, there is a small …

2011-02-15:

16:39 2011WP/2011Action_institutions_INGV edited by poddo
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13:03 Ticket #798 (few bugfixes in OPA_TAM 3.0) closed by avidard
fixed
12:58 Changeset [2587] by vidard

refer to ticket #798

12:55 Ticket #798 (few bugfixes in OPA_TAM 3.0) created by avidard
the official opa_tam branch is lacking quite a lot of fixes. It could be …

2011-02-10:

17:10 user/flavoni/libIGCM_v3.3 edited by flavoni
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17:04 Ticket #797 (should not open existing file in writing mode) closed by smasson
fixed: done in changetset:2586
17:04 Changeset [2586] by smasson

should not open existing file in writing mode, see ticket #797

17:02 Ticket #797 (should not open existing file in writing mode) created by smasson
if the namelist parameter ln_clobber is set to .FALSE. (default) and if …
09:39 Changeset [2585] by flavoni

forcing gunzip to overwrite files in SETTE, see ticket #796

09:32 Ticket #796 (enhancement for SETTE and makenemo option Fdel_key) closed by flavoni
fixed
09:32 Changeset [2584] by flavoni

small modifications for SETTE, see ticket #796

09:32 Changeset [2583] by flavoni

small modifications for SETTE, see ticket #796

09:31 Ticket #796 (enhancement for SETTE and makenemo option Fdel_key) created by flavoni
Modified Fdel_key for makenemo, and SETTE functions.

2011-02-09:

17:27 2011WP/2011Stream2/Dynamic Memory edited by gm
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15:29 user/flavoni/libIGCM_v3.3 edited by flavoni
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15:28 user/flavoni/libIGCM/setupsimupage edited by flavoni
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14:04 user/flavoni/libIGCM/change_BC edited by flavoni
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2011-02-08:

21:13 Ticket #795 (limwri_2.F90: wrong average for EVP (NEMO_3.3)) created by molines
I think that when using LIM2_EVP (standard) or LIM2_VP (option) the way …[…]
14:56 Changeset [2582] by acc

Development branch for Neptune effect code (NOCS.10, 2011 workplan)

10:44 Changeset [2581] by clevy

Tagging nemo_v3_3

09:03 2010WP/2010from Merge Party To Version3.3 edited by cbricaud
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09:01 Changeset [2580] by cbricaud

Corrections for EVP rheology in LIM2: add missing lines in limrhg.F90 and change parameters for ORCA2 in namelist_ice_lim2

08:26 2010WP/2010from Merge Party To Version3.3 edited by cbricaud
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08:13 2010WP/2010from Merge Party To Version3.3 edited by cbricaud
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08:11 2010WP/2010from Merge Party To Version3.3 edited by cbricaud
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