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2013-10-29:

18:26 2014WP/NOC edited by acc
(diff)
17:56 ticket/1085/Review edited by hadcv
(diff)
17:47 ticket/1085 edited by hadcv
(diff)
16:41 ticket/1085 created by hadcv
16:33 Ticket #1137 (Pb sbc_cpl_ice_tau wind stress on ice in "mixed oce-ice" coupling case) reopened by charris
I think those allocations (the two new ones relating to this ticket and …
16:06 ticket/1085/Review created by hadcv
10:57 Working Groups/Configuration Manager edited by clevy
(diff)
10:24 2013WP/2013Action_institutions_CMCC edited by vichi
(diff)
10:03 2014WP/2014Action_institutions_CMCC edited by vichi
(diff)

2013-10-28:

18:49 Ticket #1168 (BDY MPP issues) created by detraceyb
Merge of trunk rev 4056 and time splitting updates in …
16:12 2014WP/2014Stream0 edited by clevy
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16:00 2014WP edited by clevy
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15:59 2014WP/NOC edited by clevy
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15:57 2014WP edited by clevy
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15:56 2014WP/Met_Office edited by clevy
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15:56 2014WP edited by clevy
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15:54 2014WP/2014Action_institutions_MERCATOR edited by clevy
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15:53 2014WP edited by clevy
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15:52 2014WP edited by clevy
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15:50 2014WP edited by clevy
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15:49 2014WP/2014Action_institutions_INGV edited by clevy
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15:48 2014WP/2014Action_institutions_CNRS edited by clevy
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15:47 2014WP/2014Action_institutions_CMCC edited by clevy
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15:46 2014WP edited by clevy
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15:44 2014WP/NOC created by clevy
15:43 2014WP/Met_Office created by clevy
15:42 2014WP/2014Action_institutions_MERCATOR created by clevy
15:41 2014WP/2014Action_institutions_INGV created by clevy
15:40 2014WP/2014Action_institutions_CMCC created by clevy
15:38 2014WP edited by clevy
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15:34 2014WP edited by clevy
(diff)
15:32 2014WP/2014Stream0 created by clevy
15:15 2014WP/2014Action_institutions_CNRS created by clevy
15:10 2014WP edited by clevy
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15:06 2014WP created by clevy
14:50 Changeset [4144] by rfurner

Commit for 2013 changes; see #1085

12:32 Changeset [4143] by rfurner

Fix to ticket 1119, relating to repoducability when using envelope bathymetry

10:21 Ticket #1167 (Minor changes regarding libIGCM in v3_4 stable) closed by cetlod
fixed
10:21 Changeset [4142] by cetlod

bugfix in v3_4 stable : update the cards for libIGCM, see ticket #1167

10:20 Ticket #1167 (Minor changes regarding libIGCM in v3_4 stable) created by cetlod
Put in the cards the correct path where the forcings & inputs files are …

2013-10-25:

18:46 Changeset [4141] by andrewryan

another small bit of documentation added for the quick script

18:19 Changeset [4140] by andrewryan

added a command option to allow custom submit commands to be run by the quick start script

16:24 Changeset [4139] by andrewryan

more complete set of namobs flags specified by quick script namelist editor

16:16 Changeset [4138] by andrewryan

fixed quotation marks in namelist generator

16:06 Changeset [4137] by andrewryan

added a verbose option to quick script which shows the updates the script has made to the namelist

15:32 Changeset [4136] by andrewryan

added a dry run flag to quick script to easily test namelist editing

15:20 Changeset [4135] by andrewryan

minor documentation change to c4comb.exe API which is now the same as all other OBSTOOLS

15:08 Changeset [4134] by rfurner

Create a branch for C1D code update

13:57 2013WP/2013Action_institutions_CMCC edited by vichi
(diff)
13:15 Changeset [4133] by andrewryan

some updates to quick script

12:57 Changeset [4132] by andrewryan

renamed namoff to namooo to further reduce confusion with OFF_SRC, documentation, quick script, example namelist and data module have been updated and tested to reflect this change

11:21 Changeset [4131] by andrewryan

changed blank line convention in namelist parser to specify blank lines at the end of a namelist instead of the beginning.

2013-10-24:

23:13 Changeset [4130] by andrewryan

added default class 4 file settings to ooo utility

22:46 Changeset [4129] by andrewryan

fixed doctest in namelist parser

22:45 Changeset [4128] by andrewryan

some minor changes to namelist parser and c4comb.F90

18:58 Changeset [4127] by andrewryan

some fixes to the submit functionality of the quick start script

18:49 Changeset [4126] by andrewryan

added latest version of OOO namelist editor and test suite

18:32 Changeset [4125] by andrewryan

picked up changes from trunk which fix OBSTOOLS build with maketools

18:00 Changeset [4124] by andrewryan

changed c4comb.F90 to have the same API as fbcomb.exe

17:28 Changeset [4123] by andrewryan

added documentation to describe the use of the included offline obs oper quick script

16:16 Changeset [4122] by andrewryan

Added a quick start utility to OBSTOOLS which manipulates the standard NEMO configuration namelists to allow the offline observation operator to run.

15:20 Changeset [4121] by andrewryan

Replaced OOO_SRC/obs_fbm.F90 with symbolic link to OPA_SRC/OBS/obs_fbm.F90 and included link to dtadyn.F90

10:29 Changeset [4120] by andrewryan

Refactored offline_obs_oper to be nemo_gcm. Renamed ooomod.F90 to ooo_intp.F90 since it now contains the interpolation steps only. Renamed namelist to ooo.nml since it contains settings for the offline obs_oper only.

2013-10-23:

23:03 Ticket #1166 (Bug in Maketools) closed by smasson
fixed: this bug was introduced in r3922, see #1117 correction was done in …
23:02 Changeset [4119] by smasson

trunk: bugfix for maketools, see #1166

22:54 Changeset [4118] by andrewryan

refactored ooomod to reduce number of subroutines

22:32 Changeset [4117] by andrewryan

updated naming convention of variables to eliminate confusion with OFF_SRC variables

22:14 Changeset [4116] by andrewryan

Refactored OOO_SRC nemogcm module to reduce memory overheads.

21:50 Changeset [4115] by andrewryan

clarified what produces class 4 files in c4comb documentation

21:48 Changeset [4114] by andrewryan

Added documentation to reflect usage and purpose of c4comb.exe

21:41 Changeset [4113] by andrewryan

Merged with trunk at revision 4103 to keep branch up to date and tested with latest developments

18:56 Changeset [4112] by andrewryan

Added class 4 file rebuild utility similar to fbcomb.exe called c4comb.exe.

2013-10-22:

23:07 Changeset [4111] by andrewryan

Refactored ooo_utils USE list in OOO_SRC

22:53 Changeset [4110] by andrewryan

Added headers to each module in OOO_SRC and corrected positions of IMPLICIT NONE and PUBLIC subroutines.

22:35 Changeset [4109] by andrewryan

Renamed ooo_netcdf to ooo_utils to more accurately reflect the contents of the module.

22:27 Changeset [4108] by andrewryan

Fix reference to nemo_gcm in nemogcm.F90 in OOO_SRC. Updated write statements in ooo_read ooo_write modules.

19:05 Ticket #1166 (Bug in Maketools) created by rfurner
Fcheck_archfile.sh is called with a different number of arguments in …
18:00 Changeset [4107] by andrewryan

Modified the documentation to reflect the latest OOO_SRC build system

17:30 Changeset [4106] by andrewryan

Applied naming convention to eliminate confusion with OFF_SRC, included relevant OPA_SRC files in OOO_SRC directory.

16:47 Changeset [4105] by acc

Branch 2013/dev_r3858_NOC_ZTC, #863. Port across time-stepping changes from dev_r3867_MERCATOR1_DYN branch. Part 1: modules totally independent of ztilde changes (chiefly BDY stuff).

15:35 Changeset [4104] by smasson

v3_4_STABLE: typo introduced in r4086, see #1146

15:34 Changeset [4103] by smasson

trunk: typo introduced in r4085, see #1146

15:14 Changeset [4102] by andrewryan

Added nemogcm.F90 from OPA_SRC to OOO_SRC to customise offline obs_oper execution

15:06 Changeset [4101] by andrewryan

Renamed main program to overwrite nemo.f90 when building executable

14:22 Changeset [4100] by clem
14:07 Changeset [4099] by clem
13:54 Changeset [4098] by clem
12:25 Changeset [4097] by clem
10:00 Changeset [4096] by andrewryan

Reverse merging makenemo to revert build system to standard NEMO architecture

2013-10-21:

21:52 Changeset [4095] by andrewryan

Modified the example offline obs_oper namelist

21:13 Changeset [4094] by andrewryan

Change to allow gfortran_linux build to succeed.

18:37 Changeset [4093] by andrewryan

Added a symbolic link of the offline obs_oper executable to the EXP00 directory when a build is succesful and the offline obs_oper is selected

18:29 Changeset [4092] by andrewryan

Added example command line build usage with makenemo

18:09 Changeset [4091] by andrewryan

Upgraded makenemo script to build offline obs_oper executable alongside nemo.exe. Also, removed non vital netcdf routine from off_netcdf.F90.

17:15 Ticket #1132 (missing variable definition) closed by smasson
fixed: Done I don't know when…
17:14 Changeset [4090] by smasson

trunk: minor bugfix in chk_iomput.sh

15:41 Ticket #974 (New IOSERVER) closed by smasson
fixed
15:39 Ticket #1155 (Black Sea in closea.F90) closed by smasson
fixed: done in the trunk in r4089
15:38 Changeset [4089] by smasson

trunk: spread black see waters in ORCA2, see #1155

15:36 Ticket #1141 (Out of bounds in closea.F90/clo_rnf) closed by smasson
fixed: Ok I see your point thanks to #1155. done in the trunk in r4087 and …
15:35 Changeset [4088] by smasson

v3_4_STABLE: bugfix in closea, see #1141

15:33 Changeset [4087] by smasson

trunk: bugfix in closea, see #1141

15:20 Ticket #1146 (flread loses information in the 69th year of run) closed by smasson
fixed: The problem is that fldread uses the number of seconds since the last …
15:20 Changeset [4086] by smasson

v3_4_STABLE: add a stop if the calendar exceed i4 max value, see #1146

15:16 Changeset [4085] by smasson

trunk: add stop if calendar exceed i4 max value, see #1146

14:14 Changeset [4084] by andrewryan

Some style changes and additional header included in off_read.F90 to be consistent

14:05 ticket/1148 edited by andrew.ryan
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13:03 ticket/1148 edited by andrew.ryan
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12:59 ticket/1148 edited by andrew.ryan
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12:58 ticket/1148 edited by andrew.ryan
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12:55 class4_case_1.2.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper class 4 forecast
12:54 ticket/1148 edited by andrew.ryan
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12:48 ticket/1148 edited by andrew.ryan
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12:34 class4_depth.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper class 4 depth
12:34 class4_meridional.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper class 4 meridional
12:33 class4_zonal.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper class 4 zonal
12:32 fdbk_case_2.2.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper fdbk case II.2
12:31 fdbk_case_2.1.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper fdbk case II.1
12:31 ticket/1148 edited by andrew.ryan
(diff)
12:28 Ticket #1139 (fr1_i0 and fr2_i0 not always properly allocated) closed by smasson
fixed: I decided to bypass the bug by moving the initialization of fr1_i0 and …
12:23 Ticket #1165 (definition of fr1_i0 and fr2_i0 in coupled mode?) created by smasson
= 1) in coupled mode, fr1_i0 and fr2_i0 are defined as constant values: = …
12:19 fdbk_case_1.gif attached to ticket/1148 by andrew.ryan
Offline obs_oper fdbk case I
12:08 Changeset [4083] by smasson

v3_4_STABLE:bugfix in scccpl for sea-ice variable, see #1139

12:05 Changeset [4082] by smasson

trunk: bugfix in scccpl for sea-ice vai-riable, see #1139

10:35 ticket/1148 edited by andrew.ryan
(diff)

2013-10-20:

20:48 Changeset [4081] by andrewryan

Merge with trunk to pick up gfortran_linux build fix

18:38 Ticket #1125 (Allocate pb in geo2ocean) closed by smasson
fixed: done in the trunk r4079 and in v3_4_STABLE r4080
18:37 Changeset [4080] by smasson

v3_4_STABLE: minor bugfix in geo2ocean, see #1125

18:35 Changeset [4079] by smasson

trunk: minor bugfix in geo2ocean, see #1125

2013-10-18:

16:55 Ticket #1164 (bug in p4zsed when substepping is activated) closed by cbricaud
fixed: solved at rev 4078
16:55 Changeset [4078] by cbricaud

change time-step for init of constants in p4zsed ; see ticket 1164

16:48 Ticket #1164 (bug in p4zsed when substepping is activated) created by cbricaud
initialization of ryyss, rmtss, rday,ryyss need to be done at kt == …
12:55 2013WP/2013Action_institutions_CMCC edited by epico
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12:53 2013WP/2013Action_institutions_CMCC edited by epico
(diff)
12:05 Ticket #1162 (Wrong initialisation of PH in PISCES) closed by cetlod
fixed
11:25 Ticket #1163 (Using land suppression can give different results) created by charris
At least for ORCA025, turning on land suppression gives different results …
11:23 Changeset [4077] by cetlod

2013/dev_r3940_CNRS4_IOCRS : minor improvment

11:16 Changeset [4076] by cetlod

v3_4 stable: minor correction, see ticket #1161

11:14 Changeset [4075] by cetlod

v3_4 stable: bugfix on PH initialision in PISCES, see ticket #1162

11:12 Ticket #464 (Hard coded number of ice categories) closed by vancop
fixed: lim_dia has been identified as obsolete since no one is using it. This …
11:10 Ticket #1093 (Minor changes in limrhg.F90) closed by vancop
fixed: Has been fixed in NEMO-Paris branch to be accounted for in the next (Nov …
10:56 Changeset [4074] by cetlod

trunk: bugfix on PH initialision in PISCES, see ticket #1162

10:54 Ticket #1162 (Wrong initialisation of PH in PISCES) created by cetlod
The PH must be set from total alkalinity, DIC and chemical constants …

2013-10-17:

19:17 Changeset [4073] by cetlod

dev_v3_4_STABLE_2012:bugfix in diahsb : global conservation, see ticket #1161

17:20 Ticket #542 (Computation of redistribution among categories in LIM3) closed by clem
fixed: fixed in branch dev_r4028_CNRS_LIM3 to be included in the next merge party …
17:13 Ticket #1094 (lim_wri should not be called with key_iomput defined) closed by clem
fixed: fixed in branch dev_r4028_CNRS_LIM3 to be included in the next merge party …
17:07 Ticket #1147 (New ice salinity can be higher than ocean salinity) closed by clem
fixed
17:01 Ticket #856 (Enhanced initialization for LIM3) closed by clem
fixed: Fixed in branch: dev_r4028_CNRS_LIM3 to be included in the next merge …
15:10 Changeset [4072] by clem

few rewritings

14:42 Ticket #1134 (Large drift & Non-conservation of tracers) closed by cetlod
invalid: In an ocean model, an exact conservation of tracers can only be obtained …
14:36 Ticket #1160 (Update the diagnostics of global conservation) closed by cetlod
fixed
14:35 Ticket #1161 (Update the diagnostics of global conservation) closed by cetlod
fixed
14:35 Changeset [4071] by cetlod

bugfix in diahsb : global conservation, see ticket #1161

14:25 Ticket #1161 (Update the diagnostics of global conservation) created by cetlod
The diahsb module currently perform global conservation of T/S only in the …
14:25 Ticket #1160 (Update the diagnostics of global conservation) created by cetlod
The diahsb module currently perform global conservation of T/S only in the …
12:53 Ticket #1087 (Bug in ASM/asminc.F90 : wrong depth in freezing point calculation) closed by djlea
fixed: I have implemented the optional argument suggestion for tfreez. If you do …
12:48 Changeset [4070] by djlea

#1087: Bug fix to freezing temperature used in ASM code.

11:27 Ticket #1107 (Bug in sbc_cpl_init when running with no ice model) closed by charris
fixed: Change as agreed now on trunk in [4068] and 3.4_stable in [4069].
11:25 Changeset [4069] by charris

#1107 Change as on trunk.

11:21 Changeset [4068] by charris

#1107 Fix as agreed to allow consistent use of precip with and without an ice model.

2013-10-16:

16:45 Ticket #1137 (Pb sbc_cpl_ice_tau wind stress on ice in "mixed oce-ice" coupling case) closed by smasson
fixed: OK. instead of adding patches of patches, I removed the modifications done …
16:44 Changeset [4067] by smasson

dev_v3_4_STABLE_2012: bugfix for mixed oce-ice coupling, see #1110 and #1137

16:41 Changeset [4066] by smasson

trunk: bugfix for mixed oce-ice coupling, see #1110 and #1137

13:02 Ticket #1032 (Floating point exceptions in IOM (NetCDF)) closed by smasson
invalid
09:45 Changeset [4065] by cetlod

branch dev_r3940_CNRS4_IOCRS : minor corrections

2013-10-15:

19:54 Changeset [4064] by cetlod

branch dev_r3940_CNRS4_IOCRS: some improvments+ minor bug corrections

18:49 ticket/1148 edited by djlea
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18:45 ticket/1148 edited by djlea
(diff)
18:35 Changeset [4063] by djlea

Include offline observation operator documentation.

18:14 Changeset [4062] by djlea

Bug fix to allow CICE versions with assimilation to build.

13:06 2013WP/2013Action_institutions_CMCC edited by vichi
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12:39 2013WP/2013Action_institutions_CMCC edited by vichi
(diff)

2013-10-14:

19:00 ticket/1148/Review created by cbricaud
17:06 Changeset [4061] by flavoni

small modification in IDL_scripts for ORCA2_LIM, see ticket #724

2013-10-12:

13:24 Changeset [4060] by vichi

Update the README file in CONFIG/GYRE_BFM

2013-10-11:

16:17 2013WP/2013Action_institutions_Mercator edited by cbricaud
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16:05 2013WP/2013Action_institutions_Mercator edited by cbricaud
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15:53 2013WP/2013Action_institutions_Mercator edited by cbricaud
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15:47 Changeset [4059] by vichi

Prepare new changed file to the merge with config setting

The modified files that include the reading of a namelist
now contain a commented piece of code that is
compliant with the development branch on config settings
Older reading of namelist is maintained for running tests
before the merge party

15:43 2013WP/2013Action_institutions_Mercator edited by cbricaud
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15:43 2013WP/2013Action_institutions_Mercator edited by cbricaud
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15:42 2013WP/2013Action_institutions_Mercator edited by cbricaud
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11:51 Changeset [4058] by vichi

Finalize the structure of generic boundary conditions for trc

Include the subroutine trcbc.F90 that implements a structure
similar to trcdta for reading surface, coastal (river) and
open boundary conditions for tracers.
A new namelist trc_bc can be included in namelist_top
where the files to be read during stepping are specified.
At the moment this structure is only used by the BFM but it
is harmless for PISCES as this model still reads those
data internally.
NOTE: OBC reading has not been implementetested as it will be made
available only for BDY.
—This line, and th se below, will be ignored—

M trcdta.F90
A trcbc.F90
M par_trc.F90

2013-10-10:

17:57 Changeset [4057] by cbricaud

Fixed some compilation bugs

10:32 2013WP/2013Action_institutions_Mercator edited by cbricaud
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10:31 2013WP/2013Action_institutions_Mercator edited by cbricaud
(diff)

2013-10-09:

16:51 Changeset [4056] by cetlod

2013/dev_r3411_CNRS4_IOCRS :Add new configuration

16:39 Changeset [4055] by clem

correction for LIM2, see ticket:#1154

16:38 Changeset [4054] by clem

correction for LIM2, see ticket:#1154

14:50 2013WP/2013Action_institutions_Mercator edited by cbricaud
(diff)

2013-10-08:

19:15 Working Groups/Configuration Manager edited by jpaul
(diff)
19:14 Working Groups/Configuration Manager edited by jpaul
(diff)

2013-10-07:

15:40 2013WP/2013Action_institutions_Met Office edited by rfurner
(diff)
15:36 2013WP/2013Action_institutions_Met Office edited by rfurner
(diff)
15:34 2013WP/2013Action_institutions_Met Office edited by rfurner
(diff)

2013-10-04:

18:08 Changeset [4053] by djlea

Add a key to protect code for the offline observation operator

13:27 Ticket #1159 (NOC new development branch: Loglayer Bottom friction Limiter) created by hliu
Add a limiter for loglayer bottom friction
13:25 Changeset [4052] by hliu

Creation of a new branch for NOC development work which add a limiter for Loglayer bottom friction setup

13:19 Changeset [4051] by hliu

New branch for NOC development of Wetting and Drying. See ticket 1158

13:09 Ticket #1158 (NOC Development branch: Wetting and Drying) created by hliu
Creation of a new branch for Wetting/Drying? (only for sigma coordinate + …

2013-10-03:

16:05 Changeset [4050] by rfurner

Move Met Office Arch file to ARCH directory and update to work with NetCDF4 and XIOS

11:07 Changeset [4049] by clevy

Configuration setting/bugfixes for SETTE see ticket:#1074

2013-10-02:

18:32 Changeset [4048] by djlea

Cleaning and debugging of the observation operator. Turn off the night time averaging of SST data by default, but add a namelist option to switch it on.

12:27 Ticket #1157 (Changes to allow C1D configuration to be run with detached XIOS) created by hadcv
* Undo a previous fix for xios_context_initialize I suggested in #1096

2013-10-01:

10:32 2013WP/2013Action_institutions_Mercator edited by cbricaud
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09:55 2013WP/2013Action_institutions_Mercator edited by cbricaud
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09:47 2013WP/2013Action_institutions_Mercator edited by cbricaud
(diff)
06:59 Changeset [4047] by epico

bug fix in mppobc. ticket #1121

2013-09-30:

11:57 2013WP/2013Action_institutions_NOC edited by clevy
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11:57 2013WP/2013Action_institutions_Met Office edited by clevy
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11:56 2013WP/2013Action_institutions_Mercator edited by clevy
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11:56 2013WP/2013Action_institutions_INGV edited by clevy
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11:55 2013WP/2013Action_institutions_CNRS edited by clevy
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11:55 2013WP/2013Action_institutions_CMCC edited by clevy
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