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2015-04-09:

20:37 ticket/1495_UKMO_ISF edited by mathiot: (diff)
20:32 Changeset [5204] by mathiot: ISF cleaning branch: cleaning sbcisf + bug correction in zpshde_isf (ssumask instead of umask(:,:,1))
11:46 Ticket #1509 (alignment in iodef.xml (ORCA2_OFF_PISCES)) created by hulten: The alignment of the lines in …
00:16 Ticket #1362 (missing bits in dynzdf_imp_tam) reopened by sam: Changeset 5150 introduced two follow-on problems into module …

2015-04-08:

16:20 Changeset [5203] by timgraham: Modifications to tide code to allow a run to start from times other than midnight.
The tidal components must be initialised to the start of the day and kt_tide is set to what the timestep would have been at the start of the day (which could be < zero)
09:26 Working Groups/Data Assimilation edited by bouttier: (diff)
09:25 4th_NEMO-ASSIM_report.pdf attached to Working Groups/Data Assimilation by bouttier: Report on the 4th NEMO-Assim meeting - January 2015

2015-04-07:

18:14 Ticket #1508 (LIM3 important bug fix (crash)) closed by clem

fixed: fixed in rev 5202

17:40 Changeset [5202] by clem

LIM3: important bug fix to avoid crashes. See ticket #1508

17:40 Changeset [5201] by clem

LIM3: important bug fix to avoid crashes. See ticket #1508

17:38 Ticket #1508 (LIM3 important bug fix (crash)) created by clem

Dear all, we just found bugs in LIM3 with the capacity of crashing the …

16:22 Changeset [5200] by mathiot

ISF cleaning branch: umask_i is not an interior mask, bug in definition of scale factor for bottom cell if ice shelf, remove definition of unused variables (dynhpg, ldfslp, domzgr, trasbc)

15:50 ticket/1495_UKMO_ISF edited by mathiot

(diff)

14:27 Changeset [5199] by hadcv

Addition of standard_name entries and other changes.

XIOS namelist changes:
- Added standard_name entries to field_def.xml for physical ocean variables and SBC fields
  - This does not cover all variables!
- Added some new variable definitions
- Renamed the coupled variable "calving" to "calving_cea" to avoid a clash with the ICB variable
- Removed long_name entries from iodef.xml files
  - iodef_ar5.xml has been preserved where possible
- Added axis definitions for 20C and 28C isotherm depths
- Performed some minor cleaning and opportunistic minor edits

NEMO changes:
- Replaced an iom_put call in DIA/diahth.F90 with a definition in field_def.xml
- Added axis definitions for 20C and 28C isotherm depths

14:26 Ticket #1507 (Errors in namcfg & namctl not reported correctly) created by timgraham

At the start of nemo_init namcfg and namctl are read from namelist_ref and …

13:16 Ticket #1506 (Bug in ISOMIP configuration) closed by timgraham

fixed: Fixed at r5198

13:15 Changeset [5198] by timgraham

Minor fix for ticket #1506

13:14 Ticket #1506 (Bug in ISOMIP configuration) created by timgraham

The ISOMIP test is currently not running due to jp_cfg being set to 0.3 in …

10:37 Ticket #1505 (Add SEABASS as a reference configuration for NEMO v3_4_STABLE) closed by bouttier

fixed

10:35 Changeset [5197] by pabouttier

Add EXP00 for SEABASS configuration; See Ticket #1505

10:28 Changeset [5196] by pabouttier

Add SEABASS reference configuration for this NEMO version for now; See Ticket #1505

10:18 Ticket #1505 (Add SEABASS as a reference configuration for NEMO v3_4_STABLE) created by bouttier

SEABASS is a reference configration for Data Assimilation with NEMO. Since …

2015-04-03:

14:01 Ticket #1504 (bug in trunk after revision 5140) created by clevy: Using trunk to run ORCA1_LIM3 climatological forced experiment shows that: …
13:28 Changeset [5195] by vancop: sette modifs 2
11:55 Changeset [5194] by vancop: sette modifs 1
10:48 Changeset [5193] by vancop: A few cosmetic changes before SETTE
10:19 Ticket #1503 (TOP not conservative with vvl) created by cbricaud: a passive tracer is initilized with 1 everywhere in the domain we should …

2015-04-02:

06:08 Ticket #1442 (Variable 'nsec1jan000' is not updated during the adjoint time step) closed by bouttier: fixed
06:07 Changeset [5192] by pabouttier: Fix wrong update of nsec1jan000 in DOM/daymod_tam.F90; See Ticket #1442
06:05 Ticket #1481 (Ineffective update by adjoint of energy- and enstrophy-conserving ...) closed by bouttier: fixed
06:04 Changeset [5191] by pabouttier: Remove wrong initialisation of ze3d_ad in DYN/dynvor_tam.F90 ; See Ticket #1481

2015-04-01:

21:25 Ticket #1481 (Ineffective update by adjoint of energy- and enstrophy-conserving ...) reopened by sam: While Changeset 5153 moves the problematic assignment of 'ze3f_ad' to an …
18:26 Ticket #1442 (Variable 'nsec1jan000' is not updated during the adjoint time step) reopened by sam: The number of days of the preceding year ('nyear_len(0)') should be used …
18:14 Developers edited by nicolasmartin: (diff)
16:53 Developers edited by nicolasmartin: (diff)
15:02 Ticket #1393 (Tidal harmonic forcing namelist_ref) closed by timgraham: fixed: Fixed at r5190. Tidal components must now be set in namelist_cfg.
15:01 Changeset [5190] by timgraham: Fix for ticket #1393:
Removed tidal components from namelist_ref (and added a dummy value)
Added a check in tide_ini to ensure that at least one valid component is set
10:38 Ticket #1502 (Missing values in diaptr output (ORCA2)) created by omamce: There is two strips of missing values in ORCA2 diaptr output. At same …

2015-03-31:

19:58 Changeset [5189] by mathiot: ISF cleaning branch: simplification and bug correction in hpg_isf, zps_hde_isf, mixed layer definition, slope, diffusion, vertical advection and top friction
17:08 Changeset [5188] by timgraham: Branch for Met Office simplification task - tool to generate S coordinates file
16:44 Ticket #1356 (UKMO 2014 workplan task 13 - Updates to CICE interface) closed by timgraham: fixed: Committed to the trunk at the 2014 merge party.
14:27 Ticket #1496 (Problem with specification of tide with bdy) closed by timgraham: duplicate: I'm closing this as it's a duplicate of #1393.

2015-03-30:

16:25 Changeset [5187] by clem: LIM3 bug fix. Correcting the fresh water flux due to ice/snow used for PISCES (fmmflx). The snow part was missing.
12:03 Changeset [5186] by vancop: small error in reference parameters nn_catbnd

2015-03-27:

15:31 Changeset [5185] by vancop: TOP ice routines 2
15:29 Changeset [5184] by vancop: TOP ice routines
11:42 Changeset [5183] by clem: LIM3. finishing cleaning useless dimension nlay_i+1 in the routines
11:41 Changeset [5182] by clem: LIM3. finishing cleaning useless dimension nlay_i+1 in the routines
11:17 Changeset [5181] by vancop: Remove out-of-bound exceptions
11:16 Changeset [5180] by vancop: Remove out-of-bound exceptions

2015-03-26:

14:04 Changeset [5179] by clem: LIM3 bug fix on ice temperature output
09:56 Changeset [5178] by pabouttier: Create a specific branch for stochastic parametrization of EOS ; See ticket #1493

2015-03-25:

17:42 Changeset [5177] by clem: LIM3 improvement: part of conservation check put to false if key_bdy activated.
17:13 Changeset [5176] by clem: LIM3 online diagnostics (for debugging). Improvements of the online check of heat, salt and mass. The thresholds used to print errors on conservation (in ocean.output) now depend on the ice area (and therefore are independent on the simulation.
15:20 Changeset [5175] by vancop: Branch for sea ice tracer boundary condition, ticket #1490
15:19 Changeset [5174] by vancop: Branch for melt ponds, ticket #1487
15:19 Changeset [5173] by vancop: Branch for updated ice-atmosphere interface, ticket #1488
15:19 Changeset [5172] by vancop: Branch for CMIP6 outputs in LIM3, ticket #1489
14:10 Ticket #1497 (Only part of the array e_i (and others) stored in restart file) closed by clem: fixed: not a bug but fixed anyway in ticket #1492
14:09 Ticket #1492 (LIM3 future bug fix: heat budget) closed by clem: fixed
10:49 Ticket #1501 (C-comments inside Fortran comments make crash some cpp versions) closed by bouttier: fixed: Fixed in revision 5171.
10:49 Changeset [5171] by pabouttier: Remove star character to avoid C-style comments inside fortran comments; See Ticket #1501
10:48 Ticket #1501 (C-comments inside Fortran comments make crash some cpp versions) created by bouttier: In NEMOGCM/EXTERNAL/XMLF90/src/xpath/m_path.f90, some C-style comments …
10:44 Ticket #1500 (clean adjoint output) closed by bouttier: fixed: Fixed in revision 5170
10:44 Ticket #1499 (wrong intialization of adjoint tests) closed by bouttier: fixed
10:44 Changeset [5170] by pabouttier: Add missing lbc_lnk adj and remove extra ones in dynspg_flt ; See Ticket #1500
10:30 Changeset [5169] by pabouttier: Fix missing rn2b initialisation (direct model and TAM), described in Ticket #1498
10:02 Ticket #1360 (defects in asminc) closed by bouttier: fixed: Fixed in revision 5168
10:01 Changeset [5168] by pabouttier: Fixed several bugs described in Ticket #1360

2015-03-24:

20:45 Ticket #1443 (The trajectory at the before time level seems to be incorrectly set during ...) closed by bouttier

invalid: In fact, the direction of advancement of the state variables between the …

18:35 Changeset [5167] by clem

LIM3 bug fix. see ticket #1492 (forthcoming update) which also solve ticket #1497

18:28 Ticket #1500 (clean adjoint output) created by avidard

Related to my previous ticket #1499 one lbc_lnk_adj call is required for …

17:39 Changeset [5166] by hadcv

XIOS namelist changes:
- Make units attributes UDUnits-compatible
- Correct a couple of variable grid references
- Remove a few duplicate field definitions
- Rename a duplicate field definition for ice calving
- Add a missing axis definition
- Other minor changes