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2017-09-18:

19:30 Changeset [8536] by clem

bug fix

18:36 Changeset [8535] by jpalmier

JPALM — trdtrc — found ATF trend bug relative to TRC case

16:54 Changeset [8534] by clem

changes in style - part6 - pure cosmetics

16:51 Ticket #1940 (Problem with particles in PISCES) closed by cetlod
fixed: Done in3.6 stable & trunk
16:48 Changeset [8533] by cetlod

trunk: bugfixes to solve problem particle in PISCES, see ticket #1940

16:33 user/gm edited by gm
(diff)
16:28 user/gm created by gm
14:58 Changeset [8532] by cetlod

v3.6 stable: bugfixes to solve problem particle in PISCES, see ticket #1940

10:51 Ticket #1940 (Problem with particles in PISCES) created by aumont
== Context PISCES, when run in high resolution configurations, produce …
10:39 Tickets #1736,​1737,​1851 batch updated by frrh
fixed: Closing ticket since not directly destined for NEMO trunk and work has …
10:33 Ticket #1727 (NEMO-CICE continuation runs do not give same results and normal runs over ...) closed by frrh
fixed: Closing ticket since work not aimed at NEMO trunk. Full documentation or …
10:30 Ticket #1721 (Running eORCA1 at NEMO vn3.6 on a single PE) closed by frrh
fixed
10:25 Ticket #1658 (Cater for MEDUSA coupling) closed by frrh
fixed: Closing ticket since documented elsewhere on MO GMED system and not …
09:29 user/jpaul created by jpaul
09:09 Ticket #1503 (TOP not conservative with vvl) closed by cbricaud
fixed: solved in trunk and nemo 3.6 stable

2017-09-15:

20:07 Changeset [8531] by clem

changes in style - part6 - more clarity (still not finished)

18:27 Ticket #1200 (Array out of bounds in AGRIF update) closed by jchanut
fixed
18:01 Ticket #1939 (Add sorting of cfg.txt to makenemo) created by mdunphy
== Context makenemo rewrites cfg.txt at build time, putting the most …
17:52 user/cbricaud created by cbricaud
17:49 Ticket #1495 (specific branch for simplification/improvement of ONLY ice shelf related ...) closed by mathiot
fixed: The wiki page moved to wiki:ticket/1495_UKMO_ISF. Has been merged into the …
17:46 Ticket #1667 (coherence between time steps , forcing frequency and output frequency) closed by cbricaud
fixed: fix at http://forge.ipsl.jussieu.fr/nemo/changeset/8529 for nemo 3.63 and …
17:40 Changeset [8530] by cbricaud

fix ticket #1667 in trunk

17:37 Changeset [8529] by cbricaud

fix ticket #1667 in nemo_v3_6_STABLE

16:52 Ticket #1912 (parallel running of rebuild_nemo) closed by clevy
wontfix: Using XIOS2 in one file mode now usuallly bypasses the need for …
16:48 Ticket #1728 (Add inputs file for New Kz into the ORCA_LIM_v3.6 archive) closed by clevy
fixed
16:46 Ticket #1681 (CO6 Branch of VN3.6 Stable with KD490 Light Attenuation) closed by clevy
invalid
16:45 Ticket #1577 (Fixes for dev_r4765_CNRS_agrif updated with trunk) closed by clevy
fixed
16:43 Changeset [8528] by timgraham

First set of fixes for #1860 (getting rid of GOTO statements)

16:08 Ticket #1891 (Add missing revisions from nemo_v3_6_STABLE branch to GO6 package branch) closed by timgraham
fixed
15:59 Ticket #1895 (Fmake_WORK.sh needs to escape 'ls') closed by timgraham
fixed: Fixed at r8527
15:59 Changeset [8527] by timgraham

Fix for #1895

15:57 Ticket #1344 (UKMO 2014 workplan task 9 (Additional enhancements to the 1D ...) closed by timgraham
wontfix
15:56 Ticket #1585 (exit code for make_nemo) closed by timgraham
fixed: Fixed at r8526
15:55 Ticket #1924 (exit value for makenemo) closed by timgraham
fixed: Fixed at r8526
15:53 Changeset [8526] by timgraham

Add non-zero exit calls for makenemo errors. See #1924 and #1585

15:39 Ticket #1904 (AMM15 package branch) closed by timgraham
invalid: This ticket shouldn't be on consortium repository as it is about Met …
15:38 Ticket #1770 (AMM15 branch of VN3.6 Stable) closed by timgraham
fixed
15:29 Ticket #1741 (bug-fix for Griffies triad scheme not being actually called) closed by cbricaud
fixed: horizontal operator not implmented with griffies triads; a control print …
15:27 Changeset [8525] by cbricaud

fix in nemo_v3_6_STABLE for ticket #1741

15:02 Ticket #1818 (Uninitialized variable in sbc_oce.F90) closed by cbricaud
fixed: Effectively, nn_components has no value in that case and nn_fsbc also. …
14:10 Ticket #1917 (TOP does not compile with AGRIF) closed by cbricaud
fixed: allready mentionned in ticket #1865
14:00 Ticket #1922 (Uninitialized variable in sbcapr.F90) closed by cbricaud
fixed: fix in nemo_v3_6_STABLE : http://forge.ipsl.jussieu.fr/nemo/changeset/8523
13:59 Changeset [8524] by cbricaud

bugfix in trunk for ticket #1922

13:56 Changeset [8523] by cbricaud

bugfix in nemo_v3_6_STABLE for ticket #1922

2017-09-14:

17:52 Changeset [8522] by clem

changes in style - part6 - ice diffusion (hope the scheme still converges)

17:42 Changeset [8521] by marc

gmed:#346 Merging branches/NERC/dev_r5518_GO6_MEDUSA_conserv

14:36 Changeset [8520] by mocavero

Bug fix for MPI-only execution

09:15 Ticket #1626 (Add branch to allow sponge layer) closed by timgraham
invalid: This is internal Met Office work and shouldn't be in a ticket here. The …
09:13 Ticket #1319 (2014 Work Plan Met Office Task 10: 25hour Mean Diagnostic) closed by timgraham
fixed: This functionality is now in the trunk
01:27 Ticket #1627 (Testing branch for AMM15) closed by lovato
fixed: The work described in this ticket was done and it has been continued in …
00:55 Ticket #848 (agrif with sea-ice) closed by lovato
fixed: This is a very old activity (about 5 years) and very likely it was worked …
00:40 Ticket #1743 (SST coupling with land/sea mask) closed by lovato
wontfix: Apparently, the coupled atmospheric model is not suffering from this issue …
00:04 Ticket #1456 (2015 CMCC - 4: simplification tasks) closed by lovato
fixed: Changes related to this ticket were included in the code during 2016 Merge …

2017-09-13:

21:24 Users edited by nicolasmartin
(diff)
21:05 Users edited by nicolasmartin
Add RG topic page announcement with colored box by NewsFlashMacro (diff)
19:12 Ticket #1875 (Generation of 'nemo.exe' fails when both 'key_asminc' and 'key_zdftke' are ...) closed by lovato
fixed: The proposed ticket was applied to nemo_v3.4_stable at revision r8519. …
19:09 Changeset [8519] by lovato

3.4_stable: set subroutine tke_avn to public (see #1875)

18:50 Ticket #1159 (NOC new development branch: Loglayer Bottom friction Limiter) closed by lovato
wontfix: The log-layer bottom friction was included in the code around 2012. …
18:46 Changeset [8518] by clem

changes in style - part6 - commits of the day

17:28 Ticket #1726 (HPC-4-Scalability with MPI-OPENMP) closed by mocavero
fixed: The development has been completed even if it was not included in the …
16:32 Ticket #1451 (2015 HPC-2 /MERCATOR-3: OpenMP) closed by cbricaud
fixed
16:32 Ticket #1454 (2015 ROBUST-4 /MERCATOR-7: test NEMO_3.6 and ORCA025/ORCA12) closed by cbricaud
fixed
16:31 Ticket #1809 (merge 2016: merge dev_MERCATOR_2016 and dev_CNRS_2016) closed by cbricaud
fixed
16:30 Ticket #1781 (2016WP/CONFIGMAN-1) closed by cbricaud
fixed
16:25 Ticket #1590 (iceberg (ICB) code can't restart from single (rebuilt) restart file) closed by acc
fixed: Added to merge. Now in 3.6_STABLE branch and trunk
16:20 Ticket #1158 (NOC Development branch: Wetting and Drying) closed by acc
fixed: Very old development branch that has been superseded
15:20 Ticket #1327 (Generalised vertical interpolation in OBS for s-coordinates.) closed by jwhile
fixed: Closing ticket as code committed long ago.
15:19 Ticket #1328 (Bias correcting SST observations in OBS) closed by jwhile
fixed: Ticket closed as code committed long ago.
14:53 Ticket #1617 (BUG in domzgr.F90 when defining the envelop bathymetry (both v3.6 stable & ...) closed by timgraham
fixed: This has been corrected in nemo_v3_6_stable and was fixed in the DOMAINcfg …

2017-09-12:

20:46 Changeset [8517] by clem

changes in style - part6 - one more round

16:36 Ticket #1923 (Sea ice form drag) closed by timgraham
invalid: This is for Met Office local code so shoudn't be in a ticket on shared …

2017-09-08:

21:59 Users edited by nicolasmartin
(diff)
21:56 Users edited by nicolasmartin
(diff)
21:47 Users edited by nicolasmartin
(diff)
19:53 Changeset [8516] by clem

changes in style - part5 - I think I can see the end of the tunnel

18:19 Changeset [8515] by clem

changes in style - part5 - very nearly finished

17:09 Changeset [8514] by clem

changes in style - part5 - almost done

14:29 Changeset [8513] by dford

Protect loop with key_top.

12:45 Ticket #1297 (Minor bug in ORCA2_LIM with Agrif) closed by clevy
wontfix
12:44 Ticket #1569 (Add AGRIF SETTE tests) closed by clevy
fixed
12:43 Ticket #1612 (merge simplification branch onto trunk) closed by clevy
fixed

2017-09-07:

20:08 Changeset [8512] by clem

changes in style - part5 - reaching the end

17:54 Ticket #1762 (makenemo with SAS or OOO) closed by lovato
fixed: The suggested improvement is already available in the trunk while it was …
17:53 Changeset [8511] by lovato

3.6_stable: correct output format for large timestep values in trcbc

17:53 Changeset [8510] by lovato

3.6_stable: add SAS_SRC and OOO_SRC choices in makenemo (#1762)

17:34 Ticket #896 (test dynamical allocation performances) closed by lovato
duplicate: This is quite old issue and more recently it was decided to remove the use …
17:26 Ticket #1674 (New v3.6_STABLE branch for a non intrusive version of the new ...) closed by lovato
fixed: The development was integrated in the NEMO V3.6_STABLE (r6314) and trunk …
17:02 Ticket #1938 (Update to icb_pp.py demonstrator script to take into account all the ...) closed by acc
fixed
17:01 Changeset [8509] by acc

Trunk: Updated icb_pp.py script to process all fields in a trajectory mean file (#1938). Also includes bugfix to trabbl.F90 (#1932)

16:59 Ticket #1938 (Update to icb_pp.py demonstrator script to take into account all the ...) created by acc
)]]= Context The icb_pp.py demonstrator python script …
16:57 Ticket #1647 (GYRE_XIOS config) closed by lovato
fixed: The problem was still in the trunk for GYRE_BFM and GYRE_PISCES …
16:56 Changeset [8508] by lovato

trunk : remove old namelist parameter rn_ahm_0_lap from GYRE configurations (#1647)

16:51 Ticket #1404 (NEMO-wave coupling WG) closed by emanuelaclementi
fixed: Closed. All changes have been included in …
16:37 Ticket #1218 (Diawri and vvl outputting) closed by lovato
fixed: The correction were applied in the code by Andrew Coward (r5127) and the …
16:31 Ticket #1333 (UKMO 2014 workplan task 5 (Kara mixed layer diagnostic)) closed by timgraham
wontfix: This work was not completed and may be revisited at some point but the …
16:30 Ticket #1932 (trabbl not conserving tracers at the north-fold) closed by acc
fixed: Bug fix applied at revision 8507: […] svn ci -m'Branch …
16:29 Ticket #1358 (UKMO workplan 14.12 - Stand Alone Observation operator improvements) closed by timgraham
fixed: This was merged in dev_merge_2015
16:24 Changeset [8507] by acc

Branch 2015/nemo_v3_6_STABLE. Bug fix for #1932 to correct tracer conservation at the north-fold

16:17 Ticket #1350 (dev CNRS-0 --- new version of tranpc (non-penetrative convection) based ...) closed by lovato
fixed: The developments of this ticket are included in the NEMO V3.6_stable …
16:15 Ticket #1348 (dev CNRS-0 --- bulk core: simplification and optimization) closed by lovato
fixed: The changes described in this ticket are included in NEMO V3.6_STABLE.
16:03 Ticket #1332 (UKMO 2014 workplan task 4 (CF-1.5 compliance)) closed by lovato
fixed: The changes described in this ticket were all included in the code of NEMO …
14:12 user/nicolasmartin/Bibliography Building edited by nicolasmartin
(diff)
12:28 Changeset [8506] by clem

changes in style - part5 - continue changing init routines

2017-09-06:

19:02 Changeset [8505] by clem

changes in style - part5 - start changing init routines

17:47 Changeset [8504] by clem

changes in style - part4 - clarify ice advection routines

15:05 Changeset [8503] by jcastill

Print namsbc_flx namelist information in the output (shelf seas configuration)

13:05 Changeset [8502] by jcastill

Bug fix - one variable was calculated using the wrong component

12:56 Changeset [8501] by dford

Add omitted do loop and divide-by-zero check.

12:01 Changeset [8500] by clem

changes in style - part3 - move output into proper files and correct a bug in debug mode

10:33 Changeset [8499] by jcastill

Remove because it was created by mistake

2017-09-05:

19:53 Changeset [8498] by clem

changes in style - part2 -

18:00 Changeset [8497] by dford

Include conversion from moles to grams in carbon to chlorophyll ratio calculation.

15:30 user/nicolasmartin/Bibliography Building edited by nicolasmartin
(diff)
15:03 Changeset [8496] by clem

debug icevar

14:34 2017WP/AGRIF-2_Tim Graham-vertical edited by timgraham
(diff)
14:02 Users/Reference Configurations/ORCA2_LIM3_PISCES edited by clevy
(diff)

2017-09-04:

18:50 Changeset [8495] by dford

Merge in changes from dev_r5518_GO6_package_asm_surf_bgc, and adapt to the updated MEDUSA structure.

15:59 Users/Model Interfacing/Inputs Outputs edited by clevy
(diff)
14:25 Changeset [8494] by dford

New branch off head of GO6 package branch for MEDUSA assimilation changes.

13:10 Users/Model Interfacing/Inputs Outputs edited by clevy
(diff)
13:06 Users/Model Install edited by clevy
(diff)
12:59 New reply on Beginner created by clevy
[XIOS] First run nemo XIOS2.0 'attribute_map.cpp'
12:13 New reply on Interfaces created by clevy
[IO] Access to NEMO outputs
09:48 Changeset [8493] by frrh

Remove defunct development/test branch.

09:46 Changeset [8492] by frrh

Remove defunct development branch.

2017-09-01:

18:15 Changeset [8491] by clem

debug icevar.F90

17:28 Changeset [8490] by jpalmier

JPALM — mld chl — remove quick and dirty hacks

16:55 Changeset [8489] by jpalmier

JPALM — gmed ticket #346 : improve MEDUSA conservation — import BBL bug fix from NEMO ticket #1932 to GO6 branch

16:47 Changeset [8488] by clem

compilation bugs

16:35 Changeset [8487] by jpalmier

JPALM — gmed ticket #346 — branch creation

15:49 Changeset [8486] by clem

changes in style - part1 - (now the code looks better txs to Gurvan's comments)

15:12 Changeset [8485] by dford

Mask logchl increments in the ITF region.

12:17 Changeset [8484] by jamrae

Added write statements for debugging.

12:03 Changeset [8483] by clem

bug fix following #1937

12:02 Changeset [8482] by clem

bug fix following #1937

12:02 Changeset [8481] by clem

bug fix following #1937

12:02 Changeset [8480] by clem

bug fix following #1937

12:01 Ticket #1937 (wrong heat budget of the leads in LIM3) created by clem
This ticket applies to the trunk and different development branches (i.e. …

2017-08-31:

19:44 Changeset [8479] by jpalmier

JPALM — trdtrc — polish field_def_bgc

17:22 Changeset [8478] by jamrae

Added call to cice2nemo for roughness length in cice_sbc_init.

14:41 Changeset [8477] by timgraham

Revert accidental change to step.F90 in last commit

14:33 Changeset [8476] by davestorkey

UKMO/dev_3.6_FVPS : implement FVPS HPG scheme.

14:15 Changeset [8475] by jpalmier

JPALM — trdtrc —add vertical integrated trends

2017-08-30:

15:08 Changeset [8474] by dford

Add fields required for logchl assimilation to restart.

11:42 Ticket #1935 (Kinetic Energy calculation is wrong) closed by timgraham
fixed: Sorry about that. Now fixed at r8473
11:38 Changeset [8473] by timgraham

Corrected fix for #1935 (not using variables that don't exist in nemo_v3_6_stable)

11:23 Ticket #1935 (Kinetic Energy calculation is wrong) reopened by arsouze
It looks like variables r1_e1e2t, e1e2u, e1e2v are not defined in …

2017-08-29:

18:20 Changeset [8472] by jpalmier

JPALM — #1933 — typo error

18:12 Changeset [8471] by jpalmier

JPALM — #1933 — add and correct passive tracer trends - needs improvements and testing

16:18 Changeset [8470] by jpalmier

JPALM — 29-08-2017 — trends bug fix TOT, ZDF, ZDP

2017-08-28:

16:42 Changeset [8469] by flavoni

#1936: add missing BATCH file

16:36 Ticket #1936 (missing test in SETTE for SAS restart_ice files) closed by flavoni
fixed
16:32 Changeset [8468] by flavoni

#1936: add in sette_rpt.sh difference of SAS restart_ice files

16:28 Ticket #1936 (missing test in SETTE for SAS restart_ice files) created by flavoni
= Analysis For developers : In SETTE tests is missing a test to evaluate …

2017-08-25:

18:56 Changeset [8467] by jpalmier

JPALM — 25-08-2017 — improve trdtrc debug print statements

16:10 Changeset [8466] by dford

Set QC value so fill values don't get assimilated.

10:47 New topic on Forks created by pderian
[Dev] NEMO + Docker for easy set-up
10:36 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) closed by timgraham
fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk along with …
10:35 Ticket #1935 (Kinetic Energy calculation is wrong) closed by timgraham
fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk
10:34 Changeset [8465] by timgraham

#1934 and #1935 - correct calculation of KE in diawri.F90

10:31 Changeset [8464] by timgraham

#1934 and #1935 - correct KE calculation in diawri.F90

2017-08-24:

19:05 Changeset [8463] by jpalmier

JPALM - trdtrc - fixes, update field_def

16:35 Ticket #1935 (Kinetic Energy calculation is wrong) created by timgraham
= Context The calculation of KE in diawri.F90 is not correct. Also note …
15:51 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) created by pderian
= Context Experienced "Segmentation fault - invalid memory reference" …
13:02 Changeset [8462] by dford

Mask land if initialising pCO2/fCO2.

2017-08-23:

18:52 Changeset [8461] by jpalmier

correct trdtrc ticket #1933

18:43 Ticket #1933 (passive tracers trends) created by jpalmier
= Context Working with the UKMO version of NEMO, i got some …
18:23 Changeset [8460] by jamrae

Moved lines setting up ssnd(jps_fmdice), as they were in the wrong place.

17:53 Changeset [8459] by jamrae

Outputs for debugging.

17:07 Changeset [8458] by jamrae

Write statements for debugging.

15:27 Changeset [8457] by dford

Option to read in a value for atmospheric xCO2.

14:20 Changeset [8456] by dford

Add pCO2/fCO2 assimilation.

12:57 Changeset [8455] by dford

Update getting chlorophyll, pCO2 and fCO2 from MEDUSA.

12:53 Changeset [8454] by dford

Branch to update logchl and fco2 obs operator for use with GO6-MEDUSA.

2017-08-22:

18:54 Changeset [8453] by jpalmier

JPALM —22-08-2017— repair trends for passive tracers

14:36 Changeset [8452] by frrh

Lock files

13:19 Changeset [8451] by jpalmier

create branch to correct the passive tracer trends

11:34 Changeset [8450] by frrh

Test locking processes for prevention of rogue commits.

2017-08-21:

16:33 Changeset [8449] by jamrae

Added some write statements for debugging.

15:06 Changeset [8448] by jamrae

Changes to NEMO coupling for form drag field.

12:01 New topic on Beginner created by wanghaoyun0831
[XIOS] First run nemo XIOS2.0 'attribute_map.cpp'
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