Timeline


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matching tags

2018-03-27:

18:01 Ticket #2071 (Allowing more flexibility with the sea surface restoring subroutine) created by yruprich
== Context The default sbcssr subroutine does not allow to perform sea …
16:45 Changeset [9443] by andmirek

#2050 move sbc_init to original place

16:17 Ticket #2070 (Reorganisation of nemogcm.F90 and mppini.F90 to better separate domain ...) closed by acc
fixed
16:04 2019WP/VALID-01_clevy-AGRIF edited by clevy
(diff)
16:03 2019WP/VALID-01_clevy-AGRIF edited by clevy
(diff)
15:58 Changeset [9442] by acc

Branch 2017/dev_merge_2017. Local architecture and batch file update for compiler and XIOS versions

15:57 Changeset [9441] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90. Stage 7: Add netcdf version of the run.stat files to stpctl.F90. Current implementation is very basic but may introduce opportunities for run-time monitoring; see ticket #2070

15:52 Changeset [9440] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90. Stage 5: Enhancement to prtctl and suppression of overlap option; see ticket #2070

15:39 Changeset [9439] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90. Stage 4: code update to sbcmod.F90 to remove redundant lbc_lnk call (emp); see ticket #2070

15:37 Changeset [9438] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90. Stage 3: Better error handling in ctl_opn; see ticket #2070

15:35 Changeset [9437] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90. Stage 2: code update to iom.F90 to take advantage of algorithmic fix; see ticket #2070

15:30 Changeset [9436] by acc

Branch 2017/dev_merge_2017. Reorganisation of nemogcm.F90 and mppini.F90 to better separate domain decomposition functions from the rest of the initialisation. Stage 1: Main reorganisation; see ticket #2070

15:25 Ticket #2070 (Reorganisation of nemogcm.F90 and mppini.F90 to better separate domain ...) created by acc
== Context Reorganisation of nemogcm.F90 and mppini.F90 to better separate …
15:20 Changeset [9435] by dford

Allow assimilation of PFT chlorophyll.

14:17 New reply on Beginner created by mbareford
[ref-cfg] Intel build (with key_agrif) based on ORCA2_LIM seg faults
12:39 New reply on Beginner created by nicolasmartin
[AGRIF] PGI can not compile ORCA2_LIM with key_agrif
12:24 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by cbricaud
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12:20 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by cbricaud
(diff)
10:32 Changeset [9434] by andmirek

#2067 add atribute for file opening

2018-03-26:

19:42 New reply on Beginner created by nicolasmartin
[AGRIF] PGI can not compile ORCA2_LIM with key_agrif
17:38 Changeset [9433] by clem

add two outputs: mean snow temperature and ice surface temperature per category

17:34 Changeset [9432] by dford

Rename logchlbal to phyto2dbal.

16:49 Changeset [9431] by dford

Allow assimilation of non-log chlorophyll, and prepare for assimilation of PFTs.

16:49 New reply on Skilled created by nicolasmartin
[FLO] Problem with NFLOAT in IOM.F90
16:47 Ticket #2069 (Compilation error with key_floats) closed by nicolasmartin
fixed: In 9430: […]
16:47 Changeset [9430] by nicolasmartin

Bugfix on trunk for key_floats compilation fix #2069

16:42 Changeset [9429] by nicolasmartin

Bugfix on 3.6 for key_floats compilation #2069

16:37 Ticket #2069 (Compilation error with key_floats) created by nicolasmartin
== Context Build a configuration with key_floats ends in a compilation …
16:11 Changeset [9428] by clem

simplification

15:38 Ticket #2068 (Wrong namelist double diffusion mixing parameter name) created by Robin_Waldman
== Context I am currently checking the activation of the EVD scheme in …
15:16 Changeset [9427] by clem

small bug in ice thickness redistribution

12:46 Changeset [9426] by andmirek

#2067 Open namelists in read only mode

12:46 Ticket #2067 (Open namelists in read only mode) created by andmirek
== Context One of the possible reason for significant NEMO slowdown during …
12:45 New reply on Skilled created by ebreitmo
[FCM] ZDFRIC.mod: target not found after an update:
11:30 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by mathiot
(diff)
11:14 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by mathiot
(diff)
10:16 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by cbricaud
(diff)
10:14 Scientific Advisory Board edited by clevy
(diff)
10:12 MembersOfCommittees.update2018.pdf attached to Scientific Advisory Board by clevy
10:11 Scientific Advisory Board edited by clevy
(diff)

2018-03-24:

12:59 New topic on Skilled created by patrizio
[FLO] Problem with NFLOAT in IOM.F90

2018-03-23:

23:39 Changeset [9425] by acc

Branch dev_merge_2017. Small bugfix to mpp_nfd_generic.h90 to get the ln_nnogather option working again. Tested with SETTE reproducibility tests and 4x8 and 8x4 decompositions give identical results to at least 1000 timesteps with and without ln_nnogather active.

15:07 New reply on Skilled created by nicolasmartin
[FCM] ZDFRIC.mod: target not found after an update:
13:46 New topic on Beginner created by cheshenko
[AGRIF] PGI can not compile ORCA2_LIM with key_agrif
09:57 Changeset [9424] by andmirek

#1881 initialize multidimensional array to 0 for XIOS read in iom_get_123d

2018-03-22:

20:38 Changeset [9423] by clem

small correction for the temperature diffusion when snow thickness is small

19:20 Changeset [9422] by jpalmier

JPALM — last modif after tests

18:55 Changeset [9421] by clem

cosmetics

18:53 Changeset [9420] by jpalmier

dd all atm CFC source file in any case

17:47 Changeset [9419] by jpalmier

JPALM — TOP last minute bug correction

16:35 Changeset [9418] by jpalmier

JPALM — switch back to CDIAC CFC file for CMIP experiment

16:28 Changeset [9417] by jpalmier

Create branch

12:42 Changeset [9416] by clem

debug icetsni output by initializing t_si in iceistate.F90

2018-03-21:

16:51 Changeset [9415] by clem

debug ice diffusion: avoid too small ice thicknesses by including a threshold (rn_himin) after ice dynamics. This should prevent the ice-ocean conduction flux from being abnormally strong

16:47 New reply on Tools created by jpaul
[SIREN] Restart file running error
16:33 New reply on Tools created by jpaul
[SIREN] Unstructured open boundaries
15:39 Changeset [9414] by nicolasmartin

Fix multiple defined references

14:43 Changeset [9413] by nicolasmartin

Complete review of 'Output and Diagnostic chapter',

  • Reduction of all lines to ~100 characters max for easier side-by-side diff
  • Use of \xmlcode{…}, \xmlline|…| and {xmllines} env. to include XML code
  • Split long tables for XML tags and attributes to smaller ones (per type family)
  • For readability, alignement of table cells content and replacement of simple equation env. by shortand syntax \[…\]
  • Several formatting modifications
14:38 New topic on Forks created by jaromir
[help-wanted] Lateral boundaries
12:51 New topic on Skilled created by ebreitmo
[FCM] ZDFRIC.mod: target not found after an update:

2018-03-20:

14:34 2018WP/Shared Actions edited by clevy
(diff)
12:19 user/flavoni/libIGCM_v3.6/config.card_description edited by nicolasmartin
(diff)
12:18 user/flavoni/libIGCM_v3.6/config.card_description edited by nicolasmartin
(diff)
11:23 Changeset [9412] by flavoni

cosmetics

2018-03-19:

13:49 Changeset [9411] by davestorkey

UKMO/dev_r8864_restart_date branch: bug fix.

13:18 user/flavoni edited by flavoni
(diff)
13:17 user/flavoni edited by flavoni
(diff)
12:49 user/flavoni edited by flavoni
(diff)
12:43 user/flavoni edited by flavoni
(diff)
12:39 user/flavoni/libIGCM_v4.0a edited by flavoni
(diff)
12:37 user/flavoni/libIGCM_v4.0a edited by flavoni
(diff)
12:34 user/flavoni/libIGCM_v4.0a edited by flavoni
(diff)
12:15 user/flavoni/libIGCM_v4.0a edited by flavoni
(diff)

2018-03-16:

19:58 Changeset [9410] by clem

avoid crash when -O0 optimization and ln_icediachk activated

19:15 Changeset [9409] by clem

debug to avoid crashing when -O0 optimization and ln_icediachk activated

2018-03-15:

18:00 Changeset [9408] by nicolasmartin

Typos fixes for undefined refs, 'Pe_flt' and 'tra_adv_zco' are still missing

17:40 Changeset [9407] by nicolasmartin

Complete refactoring of cross-referencing

  • Use of \autoref instead of simple \ref for contextual text depending on target type
  • creation of few prefixes for marker to identify the type reference: apdx|chap|eq|fig|sec|subsec|tab
17:29 Changeset [9406] by mathiot

fix for ticket #2066 in nemo 3.6

17:29 Changeset [9405] by andmirek

#1953 and #1962: Initialize lwxios and ln_xios_read

17:27 Ticket #2066 (bug if eos10 and interactive melt activated) created by mathiot
== Context Ice shelf cavities with interactive melt are working only for …
17:16 Changeset [9404] by mathiot

remove call timing_stop added during the merge with XIOS r/w

16:31 Tag change on System Team/Agenda/2018-03-15 by smasson
Tags VC added
15:57 Changeset [9403] by smasson

dev_merge_2017: update test_cases CANAL

15:55 Changeset [9402] by smasson

dev_merge_2017: update test_cases CANAL

2018-03-14:

18:30 Ticket #2065 (CFC gas transfer velocity: wrong coefficient?) closed by lovato
fixed: The code is supposed to use the coefficients described in Wanninkhof …
18:19 Changeset [9401] by lovato

trunk : Revise CFC gas transfer velocity and add CDIAC forcing file (#2065)

18:18 Changeset [9400] by lovato

v3.6 stable : Revise CFC gas transfer velocity and add CDIAC forcing file (#2065)

15:48 Changeset [9399] by smasson

dev_merge_2017: minor bugfix in diawri.F

14:33 Changeset [9398] by clem

dev_merge_2017: change ice routines so that reproducibility issue is solved for the ice (but there is still repro issue between r8996 and r9012 in dev_CNRS_2017 after 268 time steps of orca2-lim3-pisces)

14:27 Changeset [9397] by clem

dev_CNRS_2017: change ice routines so that reproducibility issue is solved for the ice (but there is still repro issue between r8996 and r9012 after 268 time steps of orca2-lim3-pisces)

11:59 Changeset [9396] by clem

dev_ICEMODEL: make the branche reproducible

09:40 Changeset [9395] by andmirek

#2050 move sbc_init

01:31 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)
01:26 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)
01:23 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)
00:49 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)
00:31 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)

2018-03-13:

23:54 Working Groups/TOP/TOP-User Quick Guide edited by lovato
(diff)
21:21 Changeset [9394] by nicolasmartin

Fix several typos, reverse (biblio then index) and shrink the manual backmatter (columns, font size, separator height) #1793

15:00 Changeset [9393] by nicolasmartin

Cleaning of section headings, reinstating the index by mixing \np and \forcode macros, continued conversion of source code inclusions

2018-03-12:

13:49 2018WP/ENHANCE-13_Olivier-Vertical_Sinking edited by lovato
(diff)
13:45 2018WP/ROBUST-03_CEthe-TOPDoc edited by lovato
(diff)
13:19 New topic on Tools created by mgunduz
[SIREN] Unstructured open boundaries
11:36 user/flavoni edited by flavoni
(diff)
11:35 user/flavoni edited by flavoni
(diff)

2018-03-09:

16:57 Changeset [9392] by nicolasmartin

Global replacement of patterns \np{id}=value by \forcode{id = value} for integer and booleans

15:26 Changeset [9391] by davestorkey

UKMO/dev_r8864_restart_date branch: bug fixes

14:41 Changeset [9390] by davestorkey

UKMO/dev_r8864_restart_date branch: commit changes.

12:15 2018WP/HPC-01_Silvia Mocavero_singlecoreperf edited by mocavero
(diff)
11:01 2018WP/Shared Actions edited by mathiot
(diff)
10:40 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by clevy
(diff)
09:56 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by cbricaud
(diff)

2018-03-08:

21:56 Changeset [9389] by nicolasmartin

Starting to use minted macros to highlight namelists parameters: \textit → \forcode
Work in progress as all escape characters (\) have to be removed in namelist parameter ids
Then several \np macros along with their paramater values with will be replaced by \forcode{np = value} apart from section headings for indexing
Fixes: style issue by reordering preamble section, removing \np macros inside equations and editing path to NEMO_manual.tex for subfiles.

17:57 Changeset [9388] by nicolasmartin

Global reorganisation of DOC directory: implementation and configuration of syntax highlighting with 'minted' LaTeX package
New macros have been created to insert different source codes (fortran, xml, c and shell-session) in the document.
Pygments Python package is now required to compile the documentation.

13:36 Changeset [9387] by andmirek

#2050 changes for sette 3 to work

12:49 Changeset [9386] by andmirek

move sbc_init below dom_init

12:36 Changeset [9385] by marc

GMED ticket 380. Merge changes from Julien's branches/NERC/dev_r5518_GO6_CO2_cmip.

11:36 Changeset [9384] by jpalmier

Jpalm — uniform field_def_bgc unit typo

10:22 Changeset [9383] by andmirek

#2050 fixes and changes

2018-03-07:

21:28 New topic on Tools created by bugone1
[SIREN] Restart file running error
18:23 Changeset [9382] by dford

Account for balancing increments, and don't allow any increments to take variables negative.

16:19 Changeset [9381] by dford

Implement pH balancing.

13:14 Changeset [9380] by jpalmier

JPALM — add the *_INV variables Missing long_name

12:43 Changeset [9379] by jpalmier

JPALM — Clean field_def_bgc

10:23 Ticket #1978 (Extend timer functionality) closed by andmirek
fixed: Reviewed and in GO6 package branch. gmed ticket 374.
08:12 Ticket #2065 (CFC gas transfer velocity: wrong coefficient?) created by mscheinert
== Context For the air-to-sea flux of CFCs/SF6 the gas transfer velocity …

2018-03-06:

20:59 Changeset [9378] by nicolasmartin

Global reorganisation of DOC directory: cosmetic changes

17:42 Changeset [9377] by jpalmier

back to * as CFC reading format

17:12 Changeset [9376] by nicolasmartin

Global reorganisation of DOC directory: refactoring & cleaning of TeX source code for readability

14:58 Ticket #2064 (ice velocity issues in AGRIF sponge layer with LIM2 VP) created by torgemartin
== Context == We found unusually high (order 101 to 102 greater than …
13:39 Changeset [9375] by jpalmier

JPALM — Typo error

13:35 Changeset [9374] by jpalmier

JPALM — 06-03-2018 — corrections after review suggestions ; see GMED 380 - comment 22

09:41 Ticket #2063 (Bug in bdydta for ice (3.6_STABLE and dev_merge_2017)) created by molines
== Context When using mono category ice bdy data, and having more than …

2018-03-05:

20:45 Changeset [9373] by nicolasmartin

Global reorganisation of DOC directory: files/folders renaming

17:15 New reply on Beginner created by mbareford
[ref-cfg] Intel build (with key_agrif) based on ORCA2_LIM seg faults
16:56 user/andmirek edited by andmirek
(diff)
16:55 user/andmirek edited by andmirek
(diff)
16:55 user/andmirek created by andmirek
14:44 Changeset [9372] by andmirek

#2062 correct USER_INC and USER_LIB

14:40 Changeset [9371] by andmirek

#2062 Changes allowing use XIOS compiled with oasis

14:31 Changeset [9370] by andmirek

#2062 Fcheck_archfile script

13:27 Ticket #2062 (modification of Fcheck_archfile script) created by andmirek
== Context Fcheck_archfile.sh checks configuration and makes modifications …

2018-03-02:

14:12 user/flavoni edited by flavoni
(diff)
14:11 user/flavoni edited by flavoni
(diff)
14:08 user/flavoni edited by flavoni
(diff)

2018-03-01:

12:44 Changeset [9369] by jpalmier

JPALM — branch corrections from review

2018-02-28:

23:09 Ticket #1180 (Bottom grid points with unrealistically cold temperature in ORCA2_LIM) reopened by dupontf
Bonjour, I am re-opening the ticket since we found the problem occurring …
19:22 Changeset [9368] by mathiot

add a sette script to compare *.stat with a reference SETTE output

17:38 Ticket #1962 (HPC-07(2017WP) Write restart file using XIOS) closed by mathiot
fixed
17:36 Ticket #1953 (HPC-06(2017WP) XIOS restart read functionality) closed by mathiot
fixed
17:23 Changeset [9367] by mathiot

Add restart read/write via XIOS capability (#1953 and #1962 and twiki: 2017WP/Met_Office-1_Mirek_XIOSread). WARNING: need to upgrade XIOS to r1296 to compile

16:29 Changeset [9366] by andmirek

#2050 first version. Compiled OK in moci test suite

14:39 Changeset [9365] by nicolasmartin

Replace 'split' by 'aligned' env, now the HTML conversion is fully operational with htlatex

12:35 Changeset [9364] by nicolasmartin

Fix mathrm syntax, equations in multline math env is still not accepted

10:29 Changeset [9363] by nicolasmartin

Working with htlatex (LaTeX to HTML): disable floatrow package globally, fix several issues by adding \protect to all "fragile" commands (\mdl, \np, \key and \ngn) inside floats (caption or table). Still few specific issues inside Annnex_ISO

2018-02-27:

12:33 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by mathiot
(diff)
10:25 Ticket #1842 (ROBUST-02(2017WP) enhancement in TEST CASES) closed by clevy
fixed

2018-02-26:

19:10 Ticket #2061 (ROBUST-01_rbourdal_C1D) created by clevy
== Context … == Implementation plan …
19:08 Ticket #2060 (VALID-11_cethe_TOP_Offline) created by clevy
== Context … == Implementation plan …
19:06 Ticket #2059 (VALID-03_smasson_regional_agrif) created by clevy
== Context … == Implementation plan …
19:01 Ticket #2058 (ROBUST-04_SFlavoni_usrdef_doc) created by clevy
== Context … == Implementation plan …
18:57 Ticket #2057 (ROBUST-03_cethe_TOP_doc) created by clevy
== Context … == Implementation plan …
18:55 Ticket #2056 (PUBLI-02_nicolas_Project_Bibliography) created by clevy
Online services like RG or Google Scholar offer decent metrics so it is …
18:52 Ticket #2055 (ENHANCE-14_cethe_PISCES_LBC) created by clevy
== Context … == Implementation plan …
18:49 Ticket #2054 (ENHANCE-07_crousset_LIM3adv_valorisation) created by clevy
== Context … == Implementation plan …
18:47 Ticket #2041 (ENHANCE-04_Gurvan-RK3) closed by clevy
duplicate
16:38 Changeset [9362] by mathiot

clean input file list for ISOMIP. ISOMIP do not need any input file (ln_read_cfg set to false in the default namelist)

16:33 Changeset [9361] by mathiot

Correction of issue related to runoff in depth and isf (apparition during METO+MERCATOR merge). Now, filter+correction applied first on emp, then on rnf (if rnf), then on isf (if isf)

16:07 Ticket #2053 (ENHANCE-13_Olivier-Vertical_Sinking) created by nicolasmartin
== Context Create a generic package in TOP to handle the vertical sinking …
15:41 Changeset [9360] by nicolasmartin

Preamble.tex: some cleaning, use \path instead of \textit for path typeset, testing of 2 different ways to include source code with syntax highlighting, preliminary work on hyphenation to fix overfull errors

15:37 Ticket #2052 (ENHANCE-09(2018WP)_rbourdal_massfluxconvection) created by rbourdal
== Context Implementation of a mass flux scheme for convection. Resolution …
14:59 Ticket #2051 (Implementation of fresh water budget control for AGRIF configurations ...) created by fschwarzkopf
== Context In AGRIF configurations (TWO-WAY), fresh water budget control …
12:50 Changeset [9359] by andmirek

#2550 read nemelists using single processor

12:49 Changeset [9358] by andmirek

#2050 wrong reference branch

12:34 Changeset [9357] by andmirek

#2050 read namelist using single procerssor

12:27 Ticket #2050 (read namelists using single processor) created by andmirek
== Context In NEMO namelists are read by all processors. This ticket is …
11:15 Ticket #2049 (VALID-04_SFlavoni_Overflow_Lock) created by flavoni
== Context … == Implementation plan …
11:15 Ticket #2048 (VALID-03_SFlavoni_global_configuration) created by flavoni
== Context … == Implementation plan …
11:14 Ticket #2047 (ROBUST-07_SFlavoni-Notebook-testcases) created by flavoni
== Context … == Implementation plan …
11:13 Ticket #2046 (PUBLI-03_SFlavoni-advectionscheme-analysis) created by flavoni
== Context … == Implementation plan …
08:54 2018WP/ENHANCE-08_Gurvan-Implicit_Drags edited by gm
(diff)
08:53 Ticket #2045 (ENHANCE-08(2018WP)_Gurvan-Implicit_Drags) created by gm
== Context proper treatment of implicit top, bottom and possibly sea-ice …
08:51 2018WP/ENHANCE-04_Gurvan-RK3 edited by gm
(diff)
08:48 2018WP/ENHANCE-09_Gurvan-GEOMETRIC edited by gm
(diff)
08:47 2018WP/ENHANCE-05_Gurvan-Vertical_Advection edited by gm
(diff)
08:43 Ticket #2044 (ENHANCE-09_Gurvan-GEOMETRIC) created by gm
== Context introduction of the GEOMETRIC parameterization of unresolved …
08:34 Ticket #2043 (ENHANCE-06(2017WP)_Gurvan-Bulk_improvements) created by gm
== Context add cool skin and warm layer in the bulk package so they are …
08:27 Ticket #2042 (ENHANCE-05_Gurvan-Vertical_Advection) created by gm
== Context A 2018 development to add an adaptive-implicit vertical …
08:17 Ticket #2041 (ENHANCE-04_Gurvan-RK3) created by gm
== Context … == Proposal …
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