Timeline
2019-05-02:
- 17:10 Changeset [10922] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Convert IOM, LDF, OBS and SBC directories and compatibility changes elsewhere that these changes enforce. Changes pass SETTE and compare with original trunk results. Outstanding issues (currently with work-arounds) in DIU/step_diu.F90 and fld_bdy_interp within SBC/fldread.F90; proper soltions pending
2019-05-01:
- 12:56 Changeset [10921] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : finish conversion of OFF
- 11:27 Changeset [10920] by
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Use ice fractions from the last coupling time to calculate grid box means of coupled fluxes.
2019-04-30:
- 17:29 Changeset [10919] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps :
- Introduce ssh, uu_b, vv_b variables with time dimension (and pointers).
- Convert dynspg modules (but no change to subcycling in dynspg_ts.F90).
- 16:48 Changeset [10918] by
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Add missing lbc_lnk, which helps with reproducibility.
- 16:44 Changeset [10917] by
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Update chlorophyll climatology relaxation with biomass balancing, error checking, and diagnostic outputs.
- 13:45 Changeset [10916] by
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Merge in revision 8148 to CO6_KD490_amm7_oper_fabm, which implemented relaxation to chlorophyll climatology for ERSEM.
- 13:43 Changeset [10915] by
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Branch for AMM-ERSEM changes related to Met Office utils ticket 216.
- 10:16 Changeset [10914] by
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GMED 450 flush iceberg files independent on lflush setting
- 10:04 Changeset [10913] by
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GMED 450 changes in diagnostic messages for iceberg model
- 09:46 Changeset [10912] by
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GMED 450 changes in namelist_ref
2019-04-29:
- 18:25 Ticket #2276 (SAS is not restartable) created by
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SAS is currently reproducible but not restartable
- 18:14 Ticket #2275 (ln_zad_Aimp) closed by
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fixed: fixed at r10906
- 18:11 Changeset [10911] by
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Major change: the advection scheme UMx has been revisited to clean all the unphysical values which occured. Minor change: the ref config SPITZ12 has been slightly modified to test more parameterizations that are available in the code (melt ponds and landfast)
- 18:10 Changeset [10910] by
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Major change: the advection scheme UMx has been revisited to clean all the unphysical values which occured. Minor change: the ref config SPITZ12 has been slightly modified to test more parameterizations that are available in the code (melt ponds and landfast)
- 17:58 Changeset [10909] by
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correct a problem with indices for ice BDY at the eastern and northern boundaries
- 17:57 Changeset [10908] by
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correct a problem with indices for ice BDY at the eastern and northern boundaries
- 17:54 Changeset [10907] by
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solve ticket #2275
- 17:36 Changeset [10906] by
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solve ticket #2275. Repro was just a matter of lbc (for Cu_adv) and an extended loop (for wi). Restartability was tricky (one needed to change r2dt by 2*rdt)
- 15:26 Ticket #2275 (ln_zad_Aimp) created by
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Option for having implicit vertical advection (ln_zad_Aimp) is not …
- 13:50 Changeset [10905] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps :
- Alter top-level TOP routines so they use the time-level indices from step.F90 rather than having their own time level indices.
- First part of changes for OFF modules.
2019-04-26:
- 14:52 Changeset [10904] by
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UKMO/NEMO_4.0_GO8_package : include shlat2d option.
- 14:24 Changeset [10903] by
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UKMO/NEMO_4.0_old_tidal_mixing : science change.
- 13:59 Changeset [10902] by
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UKMO branch to reinstate old Simmons et al tidal mixing scheme at NEMO 4.0 to compare with new scheme.
- 13:54 Changeset [10901] by
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UKMO/NEMO_4.0_GO6_mixing : science change.
- 13:51 Changeset [10900] by
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Changes to allow checking qns balance and if all terms are correctly evaluated - Test 4 described in https://code.metoffice.gov.uk/trac/gmed/ticket/454#comment:2
- 12:42 Changeset [10899] by
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UKMO branch to implement GO6 option for nn_htau.
- 12:29 Changeset [10898] by
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UKMO/NEMO_4.0_GO8_package: Add cfgs/METO_GO directory for standard diagnostics files.
- 12:17 Changeset [10897] by
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UKMO/NEMO_4.0_GO8_package branch: Copy over changes from previous version of the branch.
- Implement datestamping of restarts.
- Local diagnostics, particularly vertically-interpolated MLD diagnostics.
- Restrict write-out in tra_bbl_init with IF(lwp).
- 10:41 Changeset [10896] by
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Adding a first Draft of TOP documentation
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Tags VC added
2019-04-25:
- 14:51 Changeset [10895] by
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Fixed the GPU=1 compile option to not use managed memory
- 14:29 Changeset [10894] by
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Improving autogeneration of various versions
- 12:30 Ticket #2274 (Ill defined namelist variable nb_jpk_bdy) created by
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==== Context
Interpolation on-the-fly for BDY: nb_jpk_bdy (number of …
- 12:05 Changeset [10893] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : update with Gurvan's stylistic modifications.
- 11:22 Changeset [10892] by
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GMED 450 reviewer comments
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Tags VC added
2019-04-24:
- 14:36 Changeset [10891] by
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1) correct ice velocity at the ice edge ⇒ it changes (slightly) the ice properties at the edge. 2) apply bdy_ice_dyn at each subtime step of rheology ⇒ it changes ice velocties at the boundaries quite drastically.
- 14:35 Changeset [10890] by
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1) correct ice velocity at the ice edge ⇒ it changes (slightly) the ice properties at the edge. 2) apply bdy_ice_dyn at each subtime step of rheology ⇒ it changes ice velocties at the boundaries quite drastically.
- 13:23 Ticket #2273 (Postprocess results in paraview?) closed by
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wontfix: The short answer is no but NEMO and XIOS produce multi-dimensional NetCDF …
- 08:36 Ticket #2273 (Postprocess results in paraview?) created by
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==== Context
I am a starter with Nemo but are used to use paraview …
2019-04-23:
- 17:21 Changeset [10889] by
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UKMO GO8 package branch relative to NEMO 4.0 release.
- 16:55 Changeset [10888] by
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branches/UKMO/NEMO_4.0_mirror : clear SVN keywords
- 16:48 Changeset [10887] by
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Mirror of NEMO 4.0 release in UKMO branch with SVN keywords removed. To form base revision for UKMO builds.
- 16:47 Changeset [10886] by
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Branch created in wrong location - removing.
- 16:37 Changeset [10885] by
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Mirror of NEMO 4.0 release in UKMO branch with SVN keywords removed. To form base revision for UKMO builds.
2019-04-19:
- 17:25 user/nicolasmartin/Input Archives edited by
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(diff) - 15:46 user/nicolasmartin/Input Archives edited by
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(diff)
2019-04-18:
- 19:17 user/nicolasmartin edited by
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(diff)
- 17:36 user/nicolasmartin edited by
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(diff)
- 17:00 Changeset [10884] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : dynzdf, trazdf, trczdf
- 14:29 Changeset [10883] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps: some of the ocean physics modules.
2019-04-17:
- 17:40 Changeset [10882] by
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correct the comments on the units of salt fluxes that were confusing
- 17:40 Changeset [10881] by
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correct the comments on the units of salt fluxes that were confusing
- 12:02 Changeset [10880] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps:
- Move time indices from dom_oce.F90 to step.F90.
- Implement time dimension for passive tracers with independent set of time indices in trcstp.F90.
- Update all the traadv and trcadv modules.
2019-04-16:
- 14:58 Changeset [10879] by
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Changes to reinstate heat fluxes, see https://code.metoffice.gov.uk/trac/gmed/ticket/454
- 13:53 Changeset [10878] by
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GMED 450 fix for ln_ctl
- 11:50 Changeset [10877] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : momentum advection and dynvor modules.
- 10:02 Changeset [10876] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : changes to top-level modules.
2019-04-15:
- 17:55 Changeset [10875] by
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GMED 450 open solver.stat by processor 0 only
- 16:22 Ticket #2271 (Change units of PISCES Ndeposition data) closed by
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fixed: Done in v4.0 and trunk. The input data have also been changed
- 15:57 Changeset [10874] by
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branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Revert all changes so far in preparation for implementation of new design.
- 14:34 Ticket #2272 (Uninitialised variables in PISCES) closed by
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fixed
- 14:34 Changeset [10873] by
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trunk : Initialisation of some local arrays, see ticket:2272
- 14:32 Changeset [10872] by
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v4.0 : Initialisation of some local arrays, see ticket:2272
- 14:31 Ticket #2272 (Uninitialised variables in PISCES) created by
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==== Context
In PISCES 2 variables used to compute some ligands …
- 13:47 Changeset [10871] by
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Missing ENDIF, correct logical var name for 3.6 compatibility not 4.0
- 13:00 Changeset [10870] by
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Apply correction to tnpeo calculation including reordering of k loop
as per #1884. This version of the code reflects the vn 3.6 STABLE branch
more than the vn 4.0 trunk. Although functionality is the same, here we
include the lbc_lnk of the STABLE branch (not used in the trunk)
and the workspace allocation of zpe as a pointer rather than the trunk
version which defines zpe (and other workspace arrays) simply as normal
allocatable arrays. i.e. I've opted to reflect the STABLE branch exactly
rather than to transplant more optimal code from the trunk out of context.
- 12:34 Changeset [10869] by
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trunk:Change units of Nitrogen deposition data in PISCES, see ticket:2271
- 12:32 Changeset [10868] by
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v4.0:Change units of Nitrogen deposition data in PISCES, see ticket:2271
- 12:29 Ticket #2271 (Change units of PISCES Ndeposition data) created by
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==== Context
In PISCES we assume that the units of Nitrogen deposition …
- 10:38 Changeset [10867] by
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GMED 450: find nn_timing in icbrst.F90
2019-04-12:
- 17:35 New topic on Forks created by
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[usp-cfg] NEMO-FAMB-ERSEM compile
- 16:10 Changeset [10866] by
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Fix on regexp for counters and few improvments
Thanks again Simon for your attentiveness!
code(ratio) notes(ratio) blank(ratio) sum release-3.4/NEMOGCM/NEMO/LIM_SRC_2 4399(62,0%) 1975(27,8%) 715(10,0%) 7089 release-3.4/NEMOGCM/NEMO/LIM_SRC_3 9045(61,7%) 4019(27,4%) 1587(10,8%) 14651 release-3.4/NEMOGCM/NEMO/NST_SRC 1675(67,9%) 358(14,5%) 432(17,5%) 2465 release-3.4/NEMOGCM/NEMO/OFF_SRC 1371(63,8%) 588(27,3%) 188( 8,7%) 2147 release-3.4/NEMOGCM/NEMO/OPA_SRC 64967(61,4%) 29926(28,3%) 10850(10,2%) 105743 release-3.4/NEMOGCM/NEMO/OPATAM_SRC 24646(60,9%) 12706(31,4%) 3108( 7,6%) 40460 release-3.4/NEMOGCM/NEMO/TOP_SRC 13939(61,6%) 5932(26,2%) 2728(12,0%) 22599 sum 120042(61,5%) 55504(28,4%) 19608(10,0%) 195154 release-3.6/NEMOGCM/NEMO/LIM_SRC_2 4530(62,4%) 1991(27,4%) 733(10,1%) 7254 release-3.6/NEMOGCM/NEMO/LIM_SRC_3 7390(59,3%) 3631(29,1%) 1423(11,4%) 12444 release-3.6/NEMOGCM/NEMO/NST_SRC 3345(67,5%) 1091(22,0%) 518(10,4%) 4954 release-3.6/NEMOGCM/NEMO/OFF_SRC 1441(64,3%) 593(26,4%) 204( 9,1%) 2238 release-3.6/NEMOGCM/NEMO/OOO_SRC 3476(70,9%) 945(19,2%) 476( 9,7%) 4897 release-3.6/NEMOGCM/NEMO/OPA_SRC 78997(63,3%) 33269(26,6%) 12340( 9,9%) 124606 release-3.6/NEMOGCM/NEMO/SAS_SRC 1187(57,9%) 659(32,1%) 204( 9,9%) 2050 release-3.6/NEMOGCM/NEMO/TOP_SRC 15319(61,1%) 6823(27,2%) 2903(11,5%) 25045 sum 115685(63,0%) 49002(26,7%) 18801(10,2%) 183488 release-4.0/src/ICE 8638(58,8%) 4951(33,7%) 1094( 7,4%) 14683 release-4.0/src/NST 4165(67,7%) 1537(25,0%) 446( 7,2%) 6148 release-4.0/src/OCE 66946(63,9%) 29102(27,8%) 8593( 8,2%) 104641 release-4.0/src/OFF 882(64,5%) 399(29,2%) 85( 6,2%) 1366 release-4.0/src/SAO 2002(72,7%) 464(16,8%) 286(10,3%) 2752 release-4.0/src/SAS 1186(60,8%) 606(31,0%) 157( 8,0%) 1949 release-4.0/src/TOP 17069(62,3%) 7690(28,1%) 2596( 9,4%) 27355 sum 100888(63,4%) 44749(28,1%) 13257( 8,3%) 158894 - 11:58 Changeset [10865] by
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Removal of redundant source code in modules bdydta and bdytides (ticket #2194)
2019-04-11:
- 17:32 Changeset [10864] by
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Add a simple script to calculate basic numbers on NEMO releases
code comm(ratio) total release-3.4/NEMOGCM/NEMO/LIM_SRC_2 6358 1975(23,7%) 8333 release-3.4/NEMOGCM/NEMO/LIM_SRC_3 13015 4019(23,5%) 17034 release-3.4/NEMOGCM/NEMO/NST_SRC 2071 358(14,7%) 2429 release-3.4/NEMOGCM/NEMO/OFF_SRC 1967 588(23,0%) 2555 release-3.4/NEMOGCM/NEMO/OPA_SRC 96005 29926(23,7%) 125931 release-3.4/NEMOGCM/NEMO/OPATAM_SRC 37209 12706(25,4%) 49915 release-3.4/NEMOGCM/NEMO/TOP_SRC 20111 5932(22,7%) 26043 total 176736 55504(23,8%) 232240 release-3.6/NEMOGCM/NEMO/LIM_SRC_2 6552 1991(23,3%) 8543 release-3.6/NEMOGCM/NEMO/LIM_SRC_3 11200 3631(24,4%) 14831 release-3.6/NEMOGCM/NEMO/NST_SRC 4408 1091(19,8%) 5499 release-3.6/NEMOGCM/NEMO/OFF_SRC 2037 593(22,5%) 2630 release-3.6/NEMOGCM/NEMO/OOO_SRC 4495 945(17,3%) 5440 release-3.6/NEMOGCM/NEMO/OPA_SRC 113711 33269(22,6%) 146980 release-3.6/NEMOGCM/NEMO/SAS_SRC 1855 659(26,2%) 2514 release-3.6/NEMOGCM/NEMO/TOP_SRC 22371 6823(23,3%) 29194 total 166629 49002(22,7%) 215631 release-4.0/src/ICE 13721 4951(26,5%) 18672 release-4.0/src/NST 5565 1537(21,6%) 7102 release-4.0/src/OCE 96572 29102(23,1%) 125674 release-4.0/src/OFF 1285 399(23,6%) 1684 release-4.0/src/SAO 2530 464(15,4%) 2994 release-4.0/src/SAS 1805 606(25,1%) 2411 release-4.0/src/TOP 24789 7690(23,6%) 32479 total 146267 44749(23,4%) 191016 - 17:26 Changelog edited by
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(diff)
- 17:11 Changeset [10863] by
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Correct jk starting index so that operations don't go OOB on rab_n, etc.
This at least should prevent OOB ops. Whether it's a final valid solution is
still TBA.
- 16:51 Changeset [10862] by
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Branch to fix long standing OOB ops in diaar5.F90
- 14:45 Changeset [10861] by
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Suppression of optional complex conjugation of tidal input data at open boundaries (ticket #2194)
- 11:35 Changeset [10860] by
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Relocation of the time-of-day computation in subroutine upd_tide (module tide_mod) to its callers (ticket #2194)
2019-04-10:
- 16:18 Ticket #2270 (segfault in sbcdcy.F90) created by
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==== Context
NEMO (Met Office GO8 configuration) fails with segfault in …
- 12:19 Changeset [10859] by
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Modified zdfglf.F90 to allow merge with AMM15 pkg_coupled branch.
- 12:08 Changeset [10858] by
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Creating branch to merge changes required for ocean-wave coupling in AMM15
- 10:16 Changeset [10857] by
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fix for segfault error found by pgi compiler
2019-04-09:
- 17:46 Changeset [10856] by
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Replacement of the temporary modification of a global variable in subroutine tide_update (module tide_mod) by an alternative, local mechanism (ticket #2194)
- 13:32 Changeset [10855] by
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Simplification of subroutine tide_update (module tide_mod) by transferring variable initialisations to other subroutines (ticket #2194)
- 12:31 Changeset [10854] by
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Minor changes to allow merging with OBS branch and tr@5518.
- 11:04 Changeset [10853] by
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ticket #2197 bugfix and change in NaN detection
2019-04-08:
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pearseb's Avatar
- 19:03 Changeset [10852] by
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Renaming of subroutine sbc_tide of module sbctide to tide_update, transfer of this subroutine to module tide_mod, removal of the emptied module sbctide, and related adjustments (ticket #2194)
- 15:39 Changeset [10851] by
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ticket #2197 dissable diagnostics without key_iomput
- 15:00 Changeset [10850] by
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Merged updates from AMM15_v3_6_STABLE_package_collate
- 13:35 Changeset [10849] by
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ticket #2197 for OCE ICE build without key_iomput
- 11:44 Changeset [10848] by
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ticket #2197 add build keys
2019-04-05:
- 16:51 Changeset [10847] by
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ticket #2197 merge dev_r10037_shlat2d: for use for ORCA1
- 16:48 Changeset [10846] by
- 16:43 Changeset [10845] by
- 16:07 Changeset [10844] by
- 16:01 Changeset [10843] by
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ticket #2197 merge with dev_r9950_GO8_package at 10320
- 15:53 Changeset [10842] by
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ticket #2197 branch for tests with OPENACC
- 15:14 Ticket #2269 (OBSTOOLS/sla2fb: old altimetry format) created by
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==== Context
OBSTOOLS/sla2fb is used to convert aviso sla netfiles to …
- 14:58 Changeset [10841] by
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fix for ticket #2268
- 14:55 Ticket #2268 (OBSTOOLS doesn't compile) created by
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==== Context
Compile OBSTOOLS for observation operator
==== Analysis
…
2019-04-04:
- 19:09 Changeset [10840] by
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Simplification of initialisation of tidal-constituent parameters (module tide_mod) (ticket #2194)
- 18:54 Milestone 2018 release-4.0 completed
- Specific milestone for 2018 to monitor selected questions related to the …
- 17:55 Changeset [10839] by
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Adjustments to enable the use of subroutine tide_init_harmonics for the initialisation of harmonic analysis of a number of tidal constituents that differs from the number of constituents selected for tidal forcing (ticket #2194)
- 08:36 Changeset [10838] by
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Ticket #2197 - extracted versions added
- 08:34 Changeset [10837] by
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Ticket #2197 - added version extraction to the Makefile
2019-04-03:
- 17:43 Changeset [10836] by
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Correction of the declaration of variable tide_components in subroutine dia_harm_init of module diaharm (ticket #2194)
- 17:22 Ticket #2267 (The compilation of the source code for harmonic analysis fails) closed by
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fixed: The compilation of the source code at NEMO/trunk@10835 with …
- 17:04 Changeset [10835] by
- 16:22 Ticket #2266 (The compilation of the source code for harmonic analysis fails) closed by
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fixed: The proposed modification of the error message has been applied …
- 16:10 Changeset [10834] by
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Ticket #2197 - added namelist input to the Master directory
- 16:04 Changeset [10833] by
- 15:55 Changeset [10832] by
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Reversion of an error-message string to the version at NEMO/trunk/src/OCE/DIA/diaharm.F90@10068#L128; fix for the defect described in ticket #2266
- 15:44 Changeset [10831] by
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Ticket #2197 - added the Master directory with code and makefile
- 15:28 Ticket #2267 (The compilation of the source code for harmonic analysis fails) created by
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==== Context
The defect in the release-4.0 version of the source code …
- 15:25 Ticket #2266 (The compilation of the source code for harmonic analysis fails) created by
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==== Context
The compilation of the source code for the harmonic analysis …
- 13:11 Changeset [10830] by
- 11:29 Changeset [10829] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : zdfphy.F90 and zdftke.F90.
- 08:44 Changeset [10828] by
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Updated comment ticket #2197
- 08:33 Changeset [10827] by
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Initial comment, ticket #2197
2019-04-02:
- 18:08 Ticket #2265 (Misleading minimum viscosity with Smagorinsky scheme ?) created by
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==== Context
From ldfdyn.F90, the Laplacian Smagorinsky scheme (formula … - 17:41 Changeset [10826] by
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Correction of a variable declaration in subroutine dia_harm_init of module diaharm (ticket #2194)
- 16:40 Changeset [10825] by
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2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : trazdf.F90 and dynzdf.F90
- 15:32 Changeset [10824] by
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output cfl diagnostics (courant numbers) in netcdf ⇒ add cfl_cu, cfl_cv, cfl_cw
- 15:32 Changeset [10823] by
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output cfl diagnostics (courant numbers) in netcdf ⇒ add cfl_cu, cfl_cv, cfl_cw
