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2019-06-21:

19:19 Changeset [11174] by nicolasmartin

Extension renaming
As .tex extension seems to be recognized natively by Trac for syntax highlighting, prefer to use it for all files under ./latex/global.
The difference between .tex or .sty is a bit cryptic for what I currently know

18:55 Changeset [11173] by nicolasmartin

Removal of bad file

16:24 Ticket #2302 (SETTE fails to complete the AGRIF_DEMO test if ADD_NOSIGNEDZERO has been ...) created by smueller
==== Context The configuration AGRIF_DEMO_NOAGRIF_ST, which is set up …
14:35 Changeset [11172] by nicolasmartin

Add missing files from previous commits

14:33 Changeset [11171] by nicolasmartin

Duplicate the new building process to SI3 and TOP

12:18 Changeset [11170] by nicolasmartin

Review of the overall building of any reference manual
Implementation of a compilation process shared between the 3 manuals: now a global document.tex will be used as the main LaTeX file (a symbolic link will refer to it in each ./engine/main directory).
At the time of the manual building, a few small LaTeX files will be imported on the fly from the corresponding folder ./latex/engine/main.

  • definitions.tex: engine, title, author(s), IPSL publication number and DOI ID
  • thanks.tex: list of collaborators to be thanked for the writing/reviewing
  • chapters.tex: ordered list of chapters (relative path to subfiles)
  • appendices.tex: ordered list of subordinate chapters (relative path to subfiles)
11:30 Changeset [11169] by nicolasmartin

Edition of externals accordingly to the 2 previous commits

11:26 Changeset [11168] by nicolasmartin

Import of IPSL logos

11:21 Citations edited by nicolasmartin
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11:09 Changeset [11167] by nicolasmartin

Move DOI images into badges folder

10:59 Changeset [11166] by nicolasmartin

Creation of badges directory

10:51 Changeset [11165] by mathiot

delete branch fix_sette_ticket2239 (ticket #2239)

10:47 Changeset [11164] by mathiot

delete branch branch_ticket2259 (ticket #2259)

2019-06-20:

21:31 10.1029%2F97JC00480.bib attached to Documentation by nicolasmartin
LIM2 refpub
21:31 10.1029%2F1999JC900215.bib attached to Documentation by nicolasmartin
LIM2 refpub
21:30 OPA_techreport.bib attached to Documentation by nicolasmartin
OPA refpub
21:29 Documentation edited by nicolasmartin
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21:13 Citations edited by nicolasmartin
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21:10 Citations edited by nicolasmartin
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21:09 Citations edited by nicolasmartin
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21:04 j.ocemod.2008.10.005.bib attached to Citations by nicolasmartin
NEMO-LIM3 refpub
21:03 gmd-8-2991-2015.bib attached to Citations by nicolasmartin
NEMO-LIM3 refpub
21:03 gmd-8-2465-2015.bib attached to Citations by nicolasmartin
NEMO-PISCES refpub
21:03 gmd-8-1245-2015.bib attached to Citations by nicolasmartin
NEMO-TAM refpub
20:55 j.ocemod.2008.10.005.bib attached to Citation by nicolasmartin
NEMO-LIM3 refpub
20:55 gmd-8-2991-2015.bib attached to Citation by nicolasmartin
NEMO-LIM3 refpub
20:55 gmd-8-2465-2015.bib attached to Citation by nicolasmartin
NEMO-PISCES refpub
20:54 gmd-8-1245-2015.bib attached to Citation by nicolasmartin
NEMO-TAM refpub
20:47 Changeset [11163] by mathiot

fix ticket #2301 (remove iceneg_pres and iceneg_volu from ICE_AGRIF file_def_nemo-ice.xml) in NEMO 4.0

20:47 Documentation edited by nicolasmartin
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20:39 Ticket #2239 (SETTE improvement) closed by mathiot
fixed: Commited at r11161 and in phase with trunk (r11160) and NEMO_4.0 (r11162)
20:37 Ticket #2259 (change rn_rdt and nn_fsbc in ORCA2 configurations) closed by mathiot
fixed: Change commited to trunk and NEMO 4.0 in r11160 and r11162.
20:33 Changeset [11162] by mathiot

merge branch branch_ticket2259 : update nn_fsbc, nn_itend, rn_rdt of ORCA2 and related configuration (ticket #2259)

19:46 Documentation edited by nicolasmartin
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18:55 Changeset [11161] by mathiot

merge fix_sette_ticket2239 : major simplification/improvement of SETTE (see README.rst for all the details), tested with the latest version of the trunk (r11160) (ticket #2239)

18:47 Changeset [11160] by mathiot

merge branch branch_ticket2259 : update nn_fsbc, nn_itend, rn_rdt of ORCA2 and related configuration (ticket #2259), update on sette will be commited soon

18:16 Documentation edited by nicolasmartin
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18:08 Documentation edited by nicolasmartin
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17:54 Documentation/Others edited by nicolasmartin
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17:53 Ticket #2301 (ICE_AGRIF file_def_nemo-ice.xml not working) closed by mathiot
fixed: fixed in r11159
17:50 Documentation edited by nicolasmartin
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17:50 Tag change on Documentation by nicolasmartin
Tags docs added; Documentation removed
17:49 Documentation/Others edited by nicolasmartin
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17:49 Tag change on Documentation/Others by nicolasmartin
Tags docs added
17:48 Changeset [11159] by mathiot

fix ticket #2301 (remove iceneg_pres and iceneg_volu from ICE_AGRIF file_def_nemo-ice.xml)

17:45 Ticket #2301 (ICE_AGRIF file_def_nemo-ice.xml not working) created by mathiot
BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …
17:34 Changeset [11158] by mathiot

replace hard coded svn command by ${SVN_CMD} (ticket #2239)

17:14 Documentation edited by nicolasmartin
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17:13 Citations created by nicolasmartin
17:13 Tag change on Citations by nicolasmartin
Tags citations added
16:44 Documentation edited by nicolasmartin
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16:38 Documentation edited by nicolasmartin
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16:20 Documentation edited by nicolasmartin
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16:13 Changeset [11157] by nicolasmartin

Addition of DOI badge

16:10 Changeset [11156] by nicolasmartin

Removal of PDF export

16:08 Changeset [11155] by nicolasmartin

Addition of DOI badge

15:43 Changeset [11154] by nicolasmartin

Bugfixes and changes remaining in the directory

15:40 Changeset [11153] by mathiot

add detection of local modifications in src/cfgs/test, SETTE results saved in XXXXX+ instead of XXXXX if there is differences

15:11 Changeset [11152] by nicolasmartin

Modifications in NEMO manual disseminated to SI3 and TOP

15:05 Ticket #2300 (jcat initialisation issue in icethd_do.F90) created by mathiot
==== Context Sette test AGRIF_DEMO_ST REPRO_4_8 failed to run on METO …
14:59 Changeset [11151] by nicolasmartin

New version of NEMO_manual.tex
New class scrreport for the document (KOMA-script version of default report)
Foreword is now placed before ToC.
All figures are configured with 1.0\textwidth as default.
For compatibilty, \frontmatter, \mainmatter and \backmatter cmds have been removed and old fonts in LaTeX subfiles have been replaced

  • \bf\mathbf or \bfseries
  • \it\itshape
  • \rm\mathrm or \rmfamily
  • \tt\ttfamily
14:13 Changeset [11150] by nicolasmartin

New version of foreword.tex
Most of the content have been transfered to the common frontpages.tex.
foreword.tex now contains only the 'Abstract' section which is specific for each manual.

12:48 Changeset [11149] by girrmann

dev_r10984_HPC-13 : minor modification of flather, the change in results is due to the non associativity of addition, see #2285

12:34 Changeset [11148] by nicolasmartin

Reorganisation of the latex directory
Creation of frontpages.tex to standardise the look of the manuals and few !LaTeX files to facilitate the overall modifications

  • minted : syntax highlighting
  • packages.sty : !LaTeX packages to load
  • styles.sty : gathering of all rules affecting the style
  • new_cmds.sty : custom LaTeX commands
  • todonotes.sty: insertion of TODO bubbles inline or at the margin
12:16 Documentation edited by nicolasmartin
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12:13 Changeset [11147] by clem

change name bathy_metry by bathy_meter in DOMAINcfg tool

12:04 Documentation edited by nicolasmartin
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12:00 Changeset [11146] by nicolasmartin

Add DOI badges of the3 reference manuals

11:54 New topic on Jobs created by aumont
[permanent] Ingénieur d'étude pour le soutien au développement du modèle PISCES | Closing 12 Jul. 2019
11:35 Changeset [11145] by cguiavarch

Merge changes from /NEMO/branches/2019/dev_r11078_OSMOSIS_IMMERSE_Nurser:r11139-11143

11:06 Changeset [11144] by cguiavarch

Create a branch for OSMOSIS

01:29 Documentation edited by nicolasmartin
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00:33 Documentation edited by nicolasmartin
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00:31 Documentation edited by nicolasmartin
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2019-06-19:

20:12 Documentation edited by nicolasmartin
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19:43 Documentation edited by nicolasmartin
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18:15 Changeset [11143] by agn

version w/o FK or local changes for NEMO repo

18:15 Changeset [11142] by agn

diahth now initilaized after iom_init

18:15 Changeset [11141] by agn

Modernize diahth

17:38 Changeset [11140] by mathiot

sette rpt changes: FAILED line in red, indication when the run start to diverge, move old/unused script to OLD, update README to README.rst and add extra parameters in param.cfg

16:51 Changeset [11139] by agn

Improvements to OSMOSIS for IMMERSE

16:31 Changeset [11138] by jcastill

Branch to update the branch UKMO/dev_r5518_obs_oper_update@11130 to NEMO3.6 stable @6232

15:31 Changeset [11137] by jcastill

Add missing files

2019-06-18:

19:21 Changeset [11136] by djlea

branch of code bug fixes to OBS and ASM (ticket #2298)

19:19 Changeset [11135] by djlea

branch of OBS ASM documentation updates (ticket #2297)

17:48 Changeset [11134] by jcastill

Full set of changes as in the original branch

17:45 Changeset [11133] by mathiot

remove un-needed namelist_ref bloc in domcfg tools and remove debug print (ticket #2143)

17:44 Changeset [11132] by jcastill

Remove svn keywords

17:41 Changeset [11131] by jcastill

Copy of branch AMM15_v3_6_STABLE_package_collate_bgc_diagnostics plus some fixes to merge observation branch

17:13 Changeset [11130] by jcastill

Fix small bug: variable was misspelled

17:11 Changeset [11129] by mathiot

simplification of domcfg (rm all var_n and var_b as it is not needed) (ticket #2143)

2019-06-17:

15:54 Changeset [11128] by nicolasmartin

Create styles folder to gather common files between manuals: NEMO.sty and ametsoc.bst

15:41 Changeset [11127] by clne

Create branch for surge work

15:24 Changeset [11126] by nicolasmartin

Reintroducing ametsoc.bst in latex shared folder

15:08 Changeset [11125] by nicolasmartin

Move Bib Tex? style file and Bib Tool? cfg to /utils/dev global directory for developers
As these files will be used for the buidling of the 3 manuals (NEMO, SI3 and TOP),
it is relevant to place them in a unique location of the repository and refer to with external definitions

14:49 Changeset [11124] by nicolasmartin

Editing of ametsoc.bst to generate hyperlinks for DOIs or URLs
New version of bibtool resource file:

  • Braces as entries delimiter
  • All entry types in lowercase (^@...)
  • Normalisation of pages field ([0-9]+--[0-9])
  • Deletion of url field if doi is here
  • Definition of fields order
    sort.order =
    { * =
          # title     # chapter     # pages
          # journal   # booktitle   # edition # editor # series
          # volume    # number
          # author    # institution # school
          # year      # month
          # publisher # issn        # isbn
          # doi       # url
    }
    
  • coding the format of citations keys
    key.format =
    { %s(bibkey) # %-2n(author)_
         {
              %+5.1W(journal)
                 # %0s(@book         ) { bk   } # %0s(@inbook       ) { ibk  }
                 # %0s(@incollection ) { icol } # %0s(@inproceedings) { iprc }
                 # %0s(@phdthesis    ) { phd  } # %0s(@techreport   ) { rpt  }
         }
      %2d(year)
    }
    
14:22 Changeset [11123] by nicolasmartin

Modification of LaTeX subfiles accordingly to new citations keys

14:05 Changeset [11122] by nicolasmartin

Upload advanced version of the NEMO bibliography

  • Apply global pattern for citation keys: 1stauthor{.2ndauthor{.ea}}_{journal|type}year
  • Sorting entry fields wisely
  • Removal of redundancies ('doi'='url') by keeping only the DOI field
  • Manual editing for disambiguation with lowercase letter starting from the first item: *a, *b
12:31 Changeset [11121] by nicolasmartin

Fixes on BibTeX fields

  • Restoration of few missing entries from previous cleaning
  • Protection of some french names with "von" part
  • Use of the proper syntax for doubles quotes: `` ... ''
  • Addition of backslash for underscore character in URL
12:14 Changeset [11120] by nicolasmartin

Modification of the building process with dedicated build sub-folder

11:03 Changeset [11119] by rrenshaw

minor code fix

10:52 Ticket #2299 (Minor bug in PISCES) closed by cetlod
fixed: Done on v4.0 and trunk
10:51 Changeset [11118] by cetlod

Bugfix on sea-ice effect on production, see ticket 2299

10:50 Changeset [11117] by cetlod

Bugfix on sea-ice effect on production, see ticket 2299

10:38 Ticket #2299 (Minor bug in PISCES) created by cetlod
BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

2019-06-14:

20:21 Changeset [11116] by nicolasmartin

Removing of unnecessary entries

20:17 Ticket #2298 (Bug fixes to OBS and ASM found when reviewing the documentation) created by djlea
BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …
20:13 Ticket #2297 (Updates to ASM and OBS documentation) created by djlea
==== Context The documentation for OBS and ASM needs reviewing as it is …
19:25 Changeset [11115] by nicolasmartin

Fixed version with unused references

16:51 Changeset [11114] by cetlod

trunk:small bug fix in the previous bug correction, ticket #2296

16:49 Changeset [11113] by aumont

small bug fix in the previous bug correction

15:57 Changeset [11112] by mocavero

Update the chapter on reference configurations for 4.0 release, see #2216

15:55 Changeset [11111] by laurent

LB: skin temperature now used by ECMWF bulk algorithm, and can be xios-ed ; new module "SBC/sbcblk_skin.F90" ; all physical constants defined in SBC now moved to "DOM/phycst.F90"; all air-properties and other ABL functions gathered in a new module: "SBC/sbcblk_phymbl.F90".

15:43 Changeset [11110] by davestorkey

UKMO/NEMO_4.0_GO8_package branch: Enable product diagnostics uT, vT, wS etc. (as in GO6 package branch).

13:57 Changeset [11109] by cetlod

trunk:bug fix of the ticket #2296

13:41 Ticket #2296 (Bug in the computation of the degradation rate of GOC) closed by aumont
fixed
13:41 Changeset [11108] by aumont

bug fix of the ticket #2296

13:36 Ticket #2296 (Bug in the computation of the degradation rate of GOC) created by aumont
==== Context In the new version of PISCES available with NEMO4.0, a new …
11:50 Changeset [11107] by frrh

Commit changes from Dan Copsey's sea ice heat coupling
flux fixes in branch:
branches/UKMO/dev_r5518_GO6_fix_zemp_ice_10681
revisions 11028:11088.

2019-06-13:

20:54 Changeset [11106] by nicolasmartin

Push a second review of NEMO manual from side-by-side edition of 2 previous versions (r11051 & r11052)
I will made a final review with the first upload of the new version (r11075) and will reduce significantly it as almost the half of the references are not used.
Would have save time by checking the unused entries before…

18:20 Changeset [11105] by dancopsey

Merged in changes from dev_merge_2017_GC_couple_pkg branch except for zotx1 and zoty1 changes in sbccpl.F90.

15:21 Changeset [11104] by dancopsey

Make coupling package branch

2019-06-11:

20:05 Ticket #1922 (Uninitialized variable in sbcapr.F90) closed by smueller
duplicate: This ticket has been superseded by ticket #2295.
19:44 Ticket #1922 (Uninitialized variable in sbcapr.F90) reopened by smueller
While the reported bug has been fixed in the release-3.6 version of the …
19:28 Ticket #2295 (Subroutine bdy_dta uses an uninitialised namelist parameter unless ...) created by smueller
==== Context The bug reported in ticket #2235 is also present in the …
19:09 Ticket #2294 (Missing rewind on reference namelist for nambdy_tides) created by mdunphy
==== Context When we have >1 open boundary, and when using …
18:06 Changeset [11103] by agn

Added new code to branch

16:38 Changeset [11102] by davestorkey

dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : revert change committed by mistake.

16:10 Changeset [11101] by frrh

Merge changes from Met Office GMED ticket 450 to reduce unnecessary
text output from NEMO.
This output, which is typically not switchable, is rarely of interest
in normal (non-debugging) runs and simply redunantley consumes extra
file space.
Further, the presence of this text output has been shown to
significantly degrade performance of models which are run during
Met Office HPC RAID (disk) checks.
The new code introduces switches which are configurable via the
changes made in the associated Met Office MOCI ticket 399.

16:07 Changeset [11100] by agn

Properly undid premature check into release-4.0

15:59 Changeset [11099] by davestorkey

dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Updates and bug fixes. This version still doesn't pass all SETTE tests.

15:17 Changeset [11098] by agn

Undid premature check into release-4.0

14:59 Changeset [11097] by agn

corrected . or. byg in diahth.F90

14:59 Changeset [11096] by agn

diahth outputs now controlled only by xml

14:58 Changeset [11095] by agn

use ln_diahth in step_c1d.F90

14:58 Changeset [11094] by agn

complete merge of diahth.F90

14:58 Changeset [11093] by agn

original lot of changes to diahth.F90

14:58 Changeset [11092] by agn

modified namelist_ref to include ln_diahtth key

14:58 Changeset [11091] by agn

new diahth to work without key_diahth: changes in diahth.F90

14:58 Changeset [11090] by agn

original lot of changes to diahth.F90

14:36 Changeset [11089] by agn

Modernized diahth

2019-06-10:

17:37 Changeset [11088] by dancopsey

Set namelist entry to be false by default.

17:36 Changeset [11087] by dancopsey

Allow false value for namelist entry to be the default

16:55 Ticket #2293 (agn) created by agn
==== Context The dia_hth routine in diahth.F90 still only works with a …

2019-06-09:

13:41 Changeset [11086] by laurent

LB: initial commit from trunk at r11085

2019-06-07:

12:59 Ticket #2292 (Bugs with adaptive vertical advection: 3) Courant number computation) created by jchanut
==== Context Adaptive (based on courant number) vertical advection, …

2019-06-06:

17:39 Changeset [11085] by rrenshaw

code fixes

17:22 New reply on Beginner created by giuliabonino
[ref-cfg] Intel build (with key_agrif) based on ORCA2_LIM seg faults
16:30 Changeset [11084] by davestorkey

UKMO/NEMO_4.0_old_tidal_mixing : Update to be relative to rev 11081 of NEMO_4.0_mirror.

16:29 Changeset [11083] by davestorkey

UKMO/NEMO_4.0_GO6_mixing : Update to be relative to rev 11081 of NEMO_4.0_mirror.

16:21 Changeset [11082] by davestorkey

UKMO/NEMO_4.0_GO8_package : update to be relative to 11081 of NEMO_4.0_mirror.

16:11 Changeset [11081] by davestorkey

UKMO/NEMO_4.0_mirror : update to be a copy of rev 11079 of release-4.0.

15:32 Changeset [11080] by jcastill

Latest changes from Jason

2019-06-05:

17:16 Ticket #2291 (Bugs with adaptive vertical advection: 2) Interaction with time splitting) created by jchanut
==== Context Adaptive (based on courant number) vertical advection, …
16:48 Ticket #2290 (Bugs with adaptive vertical advection: 1) dynzdf.F90) created by jchanut
==== Context Adaptive (based on courant number) vertical advection, …
16:18 Changeset [11079] by jchanut
16:17 Changeset [11078] by jchanut
16:14 Ticket #2289 (Edge bathymetry values are wrong in the OVERFLOW test case (at U-points)) closed by jchanut
fixed
16:13 Changeset [11077] by jchanut

Correct bathymetry at U-points, #2289

16:11 Changeset [11076] by jchanut

Correct bathymetry at U-points, #2289

16:07 Ticket #2289 (Edge bathymetry values are wrong in the OVERFLOW test case (at U-points)) created by jchanut
==== Context Trivial bug in OVERFLOW test case: bathymetry computation at …
09:40 Ticket #2288 (BDY is not compatible with high order schemes) created by smasson
==== Context BDY is not compatible with high order schemes (bilaplacien, …

2019-06-04:

18:16 Changeset [11075] by nicolasmartin

Submission of an intermediate version of NEMO bibliography
Manual merge of 2 existing BibTeX entries per each reference in order not to lose a field
It remains to make a check from the diff view under Trac or a diff tool and a final cleaning for indentation and new citations keys

17:47 Ticket #2287 (Bug in bdy with flather) closed by girrmann
fixed
17:46 Changeset [11074] by girrmann

dev_r10984_HPC-13 : bug fix and cleaning of flather, see #2287 and #2285

17:09 Developers/Good Practices/Usual Commands edited by nicolasmartin
(diff)
16:58 Developers/SVN Quick Reference created by nicolasmartin
16:48 Developers/Good Practices edited by nicolasmartin
(diff)
16:46 Developers/Good Practices edited by nicolasmartin
(diff)
15:16 Changeset [11073] by girrmann

v4 : fix bug in flather for bdy, see #2287

15:14 Changeset [11072] by girrmann

trunk : fix bug in flather for bdy, see #2287

15:07 Ticket #2287 (Bug in bdy with flather) created by girrmann
==== Context For eastern and northern boundaries (flagu = -1 and flagv = …
14:58 Changeset [11071] by girrmann

dev_r10984_HPC-13 : step 2, remove unneeded communications, see #2285

2019-06-03:

15:04 Changeset [11070] by rrenshaw

code fixes

12:23 Changeset [11069] by andmirek

ticket #2197 glob sum for parallel architecture

11:36 2019WP/HPC-12_Mocavero_mpi3 edited by andmirek
(diff)
11:35 2019WP/HPC-12_Mocavero_mpi3 edited by andmirek
(diff)

2019-05-29:

15:20 Changeset [11068] by dford

Branch for changes required for inclusion of spectral optics model (coupled via FABM).

11:34 Changeset [11067] by girrmann

dev_r10984_HPC-13 : new implementation of lbc_bdy_lnk in prevision of step 2, regroup communications, see #2285

2019-05-28:

18:00 Changeset [11066] by rrenshaw

changes to add regional means output and correction for section transports

16:54 Changeset [11065] by rrenshaw

new branch for changes to branch for AMM7/AMM15 3.6 suite

13:10 Changeset [11064] by dford

Deleting branch as changes merged back.

13:08 Changeset [11063] by dford

Add missing lbc_lnk and option to relax chlorophyll to climatology. See Met Office utils ticket 216.

13:06 Changeset [11062] by dancopsey

Fix compile issues for when I am running GO6+MEDUSA.

12:52 Changeset [11061] by dancopsey

Fix compile issues for when I am running GO6+MEDUSA.

2019-05-27:

15:20 Changeset [11060] by nicolasmartin

Backup a merged bibliography with duplicates commented
Bib Tool? determines double entries from successive identical citation keys so
the procedure was in 2 steps

  1. Process r11051 & r11052 versions of NEMO_manual.bib to have the same pattern for citation key
  2. Merge the 2 versions with Bib Tool? configured for duplicate checking:
    bibtool -d -- preserve.keys=on -- sort=on input_files -o output_file

It remains to clean the bibliography by deleting the doubles.

13:34 Ticket #2286 (Passive tracer vertical diffusivity in trazdf.F90 (PISCES offline)) created by mgali
==== Context When running PISCES offline simulations in 1D, I noticed …
13:05 Changeset [11059] by girrmann

dev_r10984_HPC-13 : simplify bdyini.F90 following extension of bdy detection, see #2285

2019-05-24:

21:41 Changeset [11058] by nicolasmartin

Add a configuration file as resource for Bib Tool? to define standard format for our bibliographies
After the import of several new versions of references, I found some discrepancies that it was easy to address with Bib Tool?

  • Set a common pattern for citation key: author1[_authors2[_ea]]_journalyear
  • Suppress a good bunch of trivial fields to reduce the size of the biblio in the different exports address chapter institution isbn issn issue keywords language note number organisation pages pdf series school type volume Open to discussion but to me a DOI entry is sufficient if someone wants more information
  • Prevent the use of tab for fields indentation, better readability for the bib file on Trac browser or in the output of SVN diff
  • Apply the following order of fields for every entry author # title # booktitle # journal # publisher # editor # year # month # doi # url

To apply the rules to a Bib Tex? file, run

bibtool -r bibtool.rsc input_file -o output_file
17:36 Changeset [11057] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Rewrite time filtering of tracers and SSH. This version now bit compares with the base code for ORCA1 starting from a restart.
To do:

  1. Check that it bit compares with an Euler timestep.
  2. Full SETTE tests.
  3. Check that it compiles with C1D.
  4. Check that TOP works (see 1).
15:52 Changeset [11056] by girrmann

dev_r10984_HPC-13 : Bugfix following [11048], see #2285

14:57 Changeset [11055] by dancopsey

Put the switch back in again.

14:54 Changeset [11054] by dancopsey

Put the switch back in again.

12:53 Changeset [11053] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Merge in latest changes from main branch and finish conversion of "h" variables. NB. This version still doesn't work!

12:05 Changeset [11052] by nicolasmartin

Upload draft version for new NEMO biblio
This is the result of the publications collecting on Cross Ref?.
By mistake, previous commit was supposed to be the one but it was just a small edition.

11:50 Changeset [11051] by nicolasmartin

Backup intermediate version before further minor modifications

10:27 Changeset [11050] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Rewrite dynnxt.F90 and rename dynatf.F90 with time level swapping in stp. This doesn't work yet but committing for the record before I merge in Andrew's changes to the main branch.

10:22 Changeset [11049] by girrmann

dev_r10984_HPC-13 : CYCLE instruction is not systematic anymore, computation is done on the halo whenever possible and overwritten by lbc_bdy instruction, see #2285

2019-05-23:

18:36 Changeset [11048] by girrmann

dev_r10984_HPC-13 : Step 1, boundary is now detected all over the local domain, this does not change the result. Improve bdy treatment for bdy_rnf in bdytra.F90, this changes the result when keyword runoff is specified in namelist

18:26 Changeset [11047] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Add missing initialisation of time-level indices for the AGRIF zooms. This enables AGRF SETTE tests to be reactivated but initial tests suggest minor reproducibility and restartability issues. These tests have always been sensitive to optimisation levels on the NOC cluster though so need an independent test on another system

18:02 Changeset [11046] by dancopsey

Take the switch back out again. It was decided not that this is a bug so should be automatically picked up.

17:58 Changeset [11045] by dancopsey

Take the switch back out again. It was decided not that this is a bug so should be automatically picked up.

17:13 Changeset [11044] by girrmann

dev_r10984_HPC-13 : missing part of [11024], see #2285

15:51 Changeset [11043] by nicolasmartin

Several fixes for the LaTeX compilation of the manuals

15:46 Changeset [11042] by girrmann

dev_r10984_HPC-13 : update with trunk at revision 11041

14:28 Changeset [11041] by clem

debug corner points for ice bdy

14:27 Changeset [11040] by clem

debug corner points for ice bdy

09:38 Changeset [11039] by rrenshaw

code fix

2019-05-22:

22:44 Changeset [11038] by rrenshaw

code fixes

21:03 Changeset [11037] by nicolasmartin

Review entries of TOP bibliography
Continuation of the work to complete the BibTeX entries with the help of
DOI resolver for the retrieval and Cross Ref? API for the identification.

Add byrd-co2-2008.txt & edc-co2.txt for information which give the original
references for using particular CO2 data set from NOAA-NCEI

15:44 Changeset [11036] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Remove now redundant TARGET qualifiers from oce and dom_oce arrays

15:10 Changeset [11035] by frrh

Apply changes from UKMO GMED ticket 453 to fix OOB bugs in
the calculation of diagnostic tnpeo and to apply the correct calculation
as per the current NEMO vn4.0 and 3.6_STABLE code bases, in place of the
existing incorrect formula. Thus, tnpeo diagnostic values will change
following this update.
Model prognostics and eveolution are unaffected.

Note: See TracTimeline for information about the timeline view.