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matching tags

2019-09-19:

19:48 Changeset [11579] by nicolasmartin

Fix for the sort of the blocks index

19:44 Changeset [11578] by nicolasmartin

New LaTeX commands \nam and \np to mention namelist content (step 2)
So far so good, the manual compiles successfully 4 times and everything seems in its right place

19:01 Changeset [11577] by nicolasmartin

New LaTeX commands \nam and \np to mention namelist content
(Partial commit to serve as a backup before other large edits)
In order to benefit of the syntax highlighting and to have a simpler syntax for
citing namelist block (\nam) and parameter (\np) with an optional variable assignment (\forcode{…}),
at this time the only viable solution I found is to require a double marker for
what it looks like the same item:

  1. Marker with the real name: 'tra_adv' block or 'ln_flx' parameter
  2. Marker with underscore character escaping: 'tra\_adv' block or 'ln\_flx' parameter

Despite many searches and attempts, I did not find a workaround to edit on-the-fly one or
the other marker.
In fact, the problem is on one side that the LaTeX index interprets '_' as a switch for lowering like
in math mode while on the other hand the backslash is considered for Pygments as a typo in Fortran
(red box).

For instance, \nam and \np have as of now the aforementioned 2 mandatory arguments in
the previous order (between braces) + an optional argument for \np when the parameter is defined
(between brackets at the first position):

  • \nam: LaTeX code in the \nam{tra_adv}{tra\_adv} → PDF ' in the &namtra_adv (namelist X.X) ' with syntax highlighting, the hyperlink and the index entry
  • \np: LaTeX code \np[=.true.]{ln_flx}{ln\_flx} → PDF ln_flux=.true. with syntax highlighting for the whole string and the entry in the 'parameters' index
17:33 Changeset [11576] by dancopsey

Make branch to initialise sea ice from a restart file

14:44 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)
14:42 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)
14:41 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)
14:35 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)
12:51 Changeset [11575] by clem

improve one output for sea ice. Does not change anything else in the code

12:08 Changeset [11574] by jchanut

#2222, import changes from dev_r10973_AGRIF-01_jchanut_small_jpi_jpj (i.e. #2199)

11:18 Changeset [11573] by jchanut

#2222, merged with trunk

10:47 Changeset [11572] by nicolasmartin

Review indexes style

10:44 Changeset [11571] by nicolasmartin

Cosmetic modifications on section titles

2019-09-18:

19:51 Changeset [11570] by jchanut

#2222, delete som external properties

19:30 Changeset [11569] by jchanut

#2222, useless branch

17:52 Changeset [11568] by mathiot

ENHANCE-02_ISF: fix compatibility issue between rn_hmin and ice shelf (ticket #2142)

17:41 Changeset [11567] by nicolasmartin

Style improvments

17:16 Changeset [11566] by jchanut

#2222, Start new developing branch for AGRIF vertical interpolation

16:58 Changeset [11565] by nicolasmartin

Cleaning of section titles

16:11 Changeset [11564] by jchanut

#2199, merged with trunk

15:36 Changeset [11563] by nicolasmartin

Miscellaneous changes

15:32 Changeset [11562] by nicolasmartin

New page layout with shorter margins (manual at less than 300 pages)

15:24 Changeset [11561] by nicolasmartin

Apply two thirds ratio on figures width as default

14:19 Ticket #2317 (Wrong asselin correction due to runoffs for vertical scale factors - non ...) created by jchanut
==== Context In the modified Robert-Asselin (RA) scheme designed by …
13:31 Changeset [11560] by clem

correct the conversion from 1cat to Ncat for ice data at the boundaries when using bdy

10:53 Changeset [11559] by mattmartin

Added code to include variable slip condition which is used by orca12 into the main GO6 FOAM branch so that the branch list doesn't need to be different for orca12 and orca025.

2019-09-17:

17:04 Changeset [11558] by nicolasmartin

Review all figure envs + activation of listoflistings

  1. Figure env:
    • Replace center sub-env with only \centering cmd
    • Add alternate caption for \listoffigures (shorter one between square brackets, i.e. \caption[]{})
    • Place \label outside of \caption and remove useless \protect
  1. Namelist listings
    • Put \nlst with the namelist inlcusion in a listing float env with caption and label
    • Remove namelist duplicates

— This line, and those below, will be ignored—
M subfiles/apdx_triads.tex
M subfiles/chap_model_basics_zstar.tex
M subfiles/chap_SBC.tex
M subfiles/apdx_DOMAINcfg.tex
M subfiles/apdx_s_coord.tex
M subfiles/chap_DOM.tex
M subfiles/chap_ASM.tex
M subfiles/chap_DIU.tex
M subfiles/chap_cfgs.tex
M subfiles/chap_ZDF.tex
M subfiles/chap_OBS.tex
M subfiles/chap_model_basics.tex
M subfiles/chap_time_domain.tex
M subfiles/apdx_algos.tex
M subfiles/chap_TRA.tex
M subfiles/chap_DYN.tex
M subfiles/chap_misc.tex
M subfiles/chap_DIA.tex
M subfiles/apdx_invariants.tex
M subfiles/chap_LBC.tex
M subfiles/apdx_diff_opers.tex
M subfiles/chap_STO.tex
M subfiles/chap_LDF.tex

14:57 Changeset [11557] by mattmartin

Remove updated pressure correction branch as it has been merged into the main GO6 FOAM branch.

14:55 Changeset [11556] by mattmartin

Commit changes to bias pressure correction from ticket https://code.metoffice.gov.uk/trac/utils/ticket/262.

14:20 Changeset [11555] by mattmartin

Code changes after Dan's review (comments and alignment changes only).

11:49 Ticket #2078 (cn_dir corrupts AGRIF input filenames) closed by jchanut
fixed
11:46 Changeset [11554] by jchanut

#2078: add Franziska's fix to correct input/output paths with AGRIF

08:48 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)

2019-09-16:

18:54 Changeset [11553] by mathiot

ENHANCE-02_ISF: fix coupling issue (ticket #2142)

17:38 Changeset [11552] by nicolasmartin

add unbreakable space after \fortran & fninety

16:53 Changeset [11551] by nicolasmartin

Bugfix: no index entries in math env

16:24 Changeset [11550] by rrenshaw

implement Sarah's boundary changes, changeset 11328

14:48 Changeset [11549] by jchanut

#2199: Take into account masked open boundaries in sponge definition. Output sponge values.

14:28 Developers/Developing Code Changes edited by clevy
(diff)
09:12 rcaneill_5F0A6211-1.jpg attached to User Manager Plugin Pictures by rcaneill
rcaneill's Avatar

2019-09-13:

23:42 Changeset [11548] by clem

deactivate the check of conservation in spitz12 because it is too tricky to use

18:25 Changeset [11547] by dford

Deleting branch as changes committed to trunk.

17:53 Changeset [11546] by dford

Add an observation operator for Kd490, and add some error checking so that the observation variable name read in from a feedback file matches a defined name for each observation type. Previously it could read in an incorrect variable without failure. See https://code.metoffice.gov.uk/trac/utils/ticket/247.

17:34 Changeset [11545] by dford

Specify an index for the xEPS diagnostic from FABM, for use by the observation operator. See https://code.metoffice.gov.uk/trac/utils/ticket/247.

16:37 Changeset [11544] by nicolasmartin

Missing modifications from previous commit

15:57 Changeset [11543] by nicolasmartin

Implementation of convention for labelling references + files renaming
Now each reference is supposed to have the information of the chapter in its name
to identify quickly which file contains the reference (\label{$prefix:$chap_...)

Rename the appendices from 'annex_' to 'apdx_' to conform with the prefix used in labels (apdx:...)
Suppress the letter numbering

15:27 Changeset [11542] by jchanut

#2199: 1) Replace TWO_WAY cpp key by namelist flag ln_agrif_2way. 2) Clean agrif_user module. At this stage, code is reproducible in one way mode down to jpi/jpj=3. Issues for small subdomain sizes (e.g. aprox < 7x7) remain in update (i.e. in 2 way mode). Masking of sponge in unconnected areas has to be implemented.
-Cette ligne, et les suivantes ci-dessous, seront ignorées—

M src/NST/agrif_all_update.F90
M src/NST/agrif_user.F90
M src/NST/agrif_oce_sponge.F90
M src/NST/agrif_ice_update.F90
M src/NST/agrif_top_update.F90
M src/NST/agrif_oce.F90
M src/NST/agrif_oce_update.F90
M cfgs/SHARED/namelist_ref

09:51 Scientific Advisory Board/Agenda/2019-09-12 edited by clevy
(diff)
09:51 Scientific Advisory Board/Agenda/2019-09-12 edited by clevy
(diff)
09:47 NEMO_NDC_12sept2019_C.LEVY.pdf attached to Scientific Advisory Board/Agenda/2019-09-12 by clevy

2019-09-12:

18:41 Changeset [11541] by mathiot

ENHANCE-02_ISF: simplify use of ln_isf, add extra comments + minor changes (ticket #2142)

17:33 NEMO_VV_NDC_Sep_2019.pdf attached to Scientific Advisory Board/Agenda/2019-09-12 by mikebell
Report on discussions of verification and validation
17:33 NEMO_WG_NDC_July_2019.pdf attached to Scientific Advisory Board/Agenda/2019-09-12 by mikebell
Proposals for revised scopes for NEMO Working Group Leader role & NDC
17:14 Changeset [11540] by andmirek

Ticket #2314 correction to previous commit

15:43 Ticket #2316 (Wrong variable in reference namelist) created by emalod
==== Context Reference namelist of trunk version (namsbc_cpl) includes …
14:01 Changeset [11539] by andmirek

enable more than 100000 processors for run

13:56 Sharing-NEMO-configurations_nemo-devcom_2019-09-12.pdf attached to Scientific Advisory Board/Agenda/2019-09-12 by lesommer
Presentation on IMMERSE scheme for sharing NEMO configurations
13:55 LeSommer_physical-processes-subgroups_nemo-devcom_2019-09-12.pdf attached to Scientific Advisory Board/Agenda/2019-09-12 by lesommer
Presentation on physical processes sub-groups
10:41 Changeset [11538] by jchanut

#2199, enforce ln_nnogather=.FALSE. if no periodic conditions. Some issues have been encountered in VORTEX test case.

10:24 Changeset [11537] by clem

make sure SI3 doc can be compiled, plus small edits

09:59 Scientific Advisory Board/Agenda/2019-09-12 edited by lovato
(diff)

2019-09-11:

16:07 Ticket #2285 (Optimization of the communications in BDY) closed by smasson
fixed
15:54 Changeset [11536] by smasson

trunk: merge dev_r10984_HPC-13 into the trunk

15:52 Changeset [11535] by smasson

dev_r10984_HPC-13= merge with trunk

15:38 Changeset [11534] by clem

small debug on doc

15:37 Changeset [11533] by smasson

v4: merge with trunk

15:30 Changeset [11532] by smasson

trunk: merge with v4

14:35 Changeset [11531] by clem

update doc bdy

13:24 Scientific Advisory Board/Agenda/2019-09-12 edited by nadwocean
(diff)
12:56 Scientific Advisory Board/Agenda/2019-09-12 edited by vancop
(diff)
12:30 Changeset [11530] by smasson

dev_r10984_HPC-13 : minors harmless bugfixes to pass sette in debug mode

10:54 Scientific Advisory Board/Agenda/2019-09-12 edited by clevy
(diff)
10:52 Scientific Advisory Board/Agenda/2019-09-12 edited by clevy
(diff)

2019-09-10:

18:35 Changeset [11529] by mathiot

ENHANCE-02_ISF: fixes for ice sheet coupling (ticket #2142)

18:28 Changeset [11528] by smasson

dev_r10984_HPC-13 : update mpp doc

17:46 Changeset [11527] by acc

Branch 2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps. Removal of TOP-specific time indices (Nnn_trc etc.). This completes the removal of the trc sub-timestepping option and dynamics, active tracers and passive tracers must now have common time-steps. Note time-filtering for passive tracers is done in trc_trp (trc_atf) but the (now shared) time indices are not swapped until after calls to tra_atf, dyn_atf and ssh_atf in step. Calls to trc routines after trc_atf have had their time-index arguments adjusted accordingly. These changes have been fully SETTE-tested.

17:20 Scientific Advisory Board/Agenda/2019-09-12 edited by mcastril
(diff)
17:02 Scientific Advisory Board/Agenda/2019-09-12 edited by mcastril
(diff)
16:24 Changeset [11526] by clem

update doc namelists

16:18 Changeset [11525] by smasson

dev_r10984_HPC-13 : merge with trunk@,11524 see #2285

16:09 Changeset [11524] by nicolasmartin

Bugfixes

14:21 Scientific Advisory Board/Agenda/2019-09-12 edited by acc
(diff)
13:17 Changeset [11523] by mathiot

ENHANCE-02_ISF: rm debug print + simplification + rm remaining old namelist parameter (ticket #2142))

13:03 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
(diff)
12:21 Changeset [11522] by nicolasmartin

Review the beginning of the manual
Move the changelog to the common part shared between 3 manuals
Add few paragraphs on the development workflow
Improve the introduction of the manual

11:49 Changeset [11521] by mathiot

ENHANCE-02_ISF: fix issue with ice sheet coupling and conservation + other minor changes (ticket #2142)

10:28 Changeset [11520] by clem

debug spitz12

2019-09-09:

20:41 Changeset [11519] by clem

debug bdy in case no sea ice

19:57 Changeset [11518] by clem

add the final touch to the famous gaston's branch. More precisely, add the possibility to have melt ponds as input file when using bdy

18:56 Ticket #2039 (HPC-13_Mixed_precision_study-13.1_Assessment) closed by mcastril
fixed
17:04 Changeset [11517] by cetlod

minor updates

16:35 Changeset [11516] by francesca

Create HPC-02 branch - ticket #2009

16:07 Changeset [11515] by nicolasmartin

Style changes

  • logo for DOI links
  • Tweak cmds to apply manual color to chapter headings
  • Fix headings on bibliography and indexes sections
  • Remove minitoc pkg and use instead appropriate \chaptertoc custom cmd
15:38 Changeset [11514] by clem

debug ponds with bdy (fraction instead of concentration)

14:31 Changeset [11513] by clem

correct scale factors for ice rheology

12:21 Tag change on 2019WP/ENHANCE-09_Jerome_freesurface by jchanut
Tags WP2019 added; 2017, WP removed
12:19 2019WP/ENHANCE-09_Jerome_freesurface edited by jchanut
(diff)
12:05 Changeset [11512] by smasson

dev_r10984_HPC-13 : merge with trunk@11511, see #2285

11:51 2019WP/AGRIF-05_jchanut_vert_coord_interp edited by jchanut
(diff)
11:43 2019WP/ENHANCE-10_Jerome_ztilde edited by jchanut
(diff)

2019-09-06:

19:41 Changeset [11511] by clem

improve conservation checks

18:08 Changeset [11510] by clem

add ponds for bdy

18:07 Changeset [11509] by dancopsey

Merge in all the 1D river runoff code as I comitted to the GO6 package branch (skipping anything to do with Antarctic and Greenland icesheet mass).

17:53 Changeset [11508] by dancopsey

Make branch to pass icesheet mass to the ocean to feed iceberg calving and icesheet melt

17:19 Changeset [11507] by clem

add a new functionality for bdy ice by allowing the user to have input files for ice/snw temperature and salinity instead of setting a constant value. Also, input files can have any number of categories

15:24 Working Groups edited by nicolasmartin
(diff)
15:09 2019WP/HPC-08_Mirek Andrejczuk_fldread_with_XIOS edited by andmirek
(diff)
13:47 2019WP/ASINTER-05_Brodeau_Advanced_Bulk edited by laurent
(diff)
13:46 2020WP/ASINTER-03_laurent_bulk_and_wave edited by laurent
(diff)
13:44 2020WP/ASINTER-03_laurent_bulk_and_wave edited by laurent
(diff)
13:16 2019WP/ASINTER-05_Brodeau_Advanced_Bulk edited by laurent
(diff)
11:41 Changeset [11506] by acc

Branch 2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps. Small correction to trcstp.F90 to restore SETTE restartability (GYRE_PISCES, at least) with the current state of the branch. Next stage will be to remove the TOP-specific time indices (Nnn_trc etc.)

11:31 Changeset [11505] by cetlod

Deleting useless CNRS specific development branches

09:23 Changeset [11504] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Strip out all references to nn_dttrc
and the trcsub.F90 module. Notes:

  1. This version of the code currently breaks the GYRE_PISCES test in SETTE.
  2. With the removal of this option, TOP should use the OCE time index variables, eg. Nbb_trc → Nbb, nittrc000 → nit0000 etc.

2019-09-05:

19:58 Changeset [11503] by mathiot

add -Dkey_nosignedzero on METO cray compiler arch file

17:43 Working Groups edited by nicolasmartin
(diff)
17:40 Working Groups edited by nicolasmartin
(diff)
17:39 Working Groups edited by nicolasmartin
(diff)
17:30 Working Groups edited by nicolasmartin
(diff)
17:00 Changeset [11502] by dancopsey

Make branch.

14:44 Scientific Advisory Board/Agenda/2019-09-12 edited by lesommer
(diff)
14:43 Scientific Advisory Board/Agenda/2019-09-12 edited by lesommer
(diff)
09:33 Ticket #2315 (ENHANCE-11_CEthe_Shaconemo_diags) created by cetlod
BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

2019-09-04:

23:23 Scientific Advisory Board/Agenda/2019-09-12 edited by sciliberti
(diff)
19:41 Changeset [11501] by clem

introduce a point-to-point conservation check, stop the model if it fails and write the issue in a file

15:53 2019WP/HPC-06_SimonM-extendedhaloes edited by smueller
(diff)
15:51 2019WP edited by nicolasmartin
(diff)
15:49 Changeset [11500] by timgraham

In sbc_cpl_ice_flx add IF blocks so that code is only called on timesteps when coupling occurs.

15:48 Changeset [11499] by timgraham

Branch for testing conservation of coupling interface and adding effieciency improvements to the interface

14:25 Ticket #2218 (PUBS-06_Z_coordinates_comparison) closed by techene
fixed
12:18 Changeset [11498] by smueller

Removal of branch fix_ticket2302_sette (ticket #2302)

12:14 Ticket #2302 (SETTE fails to complete the AGRIF_DEMO test if ADD_NOSIGNEDZERO has been ...) closed by smueller
fixed: In 11497: […]
12:14 Changeset [11497] by smueller

Merge of branch fix_ticket2302_sette into main SETTE version (ticket #2302)

10:36 Changeset [11496] by mocavero

Create HPC-12 branch - ticket #2011

2019-09-03:

23:18 Tag change on Users by nicolasmartin
Tags agenda removed
22:33 New reply on Beginner created by nicolasmartin
[CPP-key] NEMO 4.0 and the keys
22:15 Changelog edited by nicolasmartin
(diff)
22:15 Tag change on Changelog by nicolasmartin
Tags dev added; notes, release removed
22:00 New reply on Skilled created by nicolasmartin
[land-proc] nemo3.6 + xios 2.0 Segfault (invalid pointer - xios_server) Issue - while removing land grid cells
21:57 New reply on Beginner created by nicolasmartin
[input] AMM12 files moved?
21:52 New reply on Beginner created by nicolasmartin
[XIOS] Can not running nemo
21:46 New reply on Beginner created by nicolasmartin
[ref-cfg] Intel build (with key_agrif) based on ORCA2_LIM seg faults
21:21 New reply on Tools created by nicolasmartin
[XIOS] XIOS detached mode
21:06 Scientific Advisory Board/Agenda/2019-09-12 edited by jchanut
(diff)
20:36 New reply on Skilled created by nicolasmartin
[BDY] Nesting with dyn3d open boundary conditions
20:28 New reply on Skilled created by nicolasmartin
[stp-cfg] Setting up a Barotropic tide forcing NEMO configuration
20:27 New reply on Skilled created by nicolasmartin
[FLO] key_floats: simulations freeze
20:26 New reply on Skilled created by nicolasmartin
[tide] Boundary Tide: real and imaginary components
20:21 New reply on Skilled created by nicolasmartin
[LIM3] Question about diffusion operator
20:21 New reply on Skilled created by nicolasmartin
[strait] Volume of the domain - transport at the strait
20:20 New reply on Skilled created by nicolasmartin
[BDY] Boundary Forcing files
20:19 New reply on Skilled created by nicolasmartin
[FLO] Problem with NFLOAT in IOM.F90
20:18 New reply on Skilled created by nicolasmartin
[BDY] &nambdy options and CFL
20:01 New reply on Interfaces created by nicolasmartin
[IO] NEMO3.3 mean and instantaneous output
17:54 New reply on Interfaces created by nicolasmartin
[OASIS] NEMO 4.0 / OASIS3-MCT 4.0 compatibility
17:45 Changeset [11495] by mathiot

ENHANCE-02_ISF: fix issue in the computation of utbl and vtbl + cosmetic change (ticket #2142)

17:06 2019WP edited by nicolasmartin
(diff)
15:54 New topic on Forks created by zhangxl
[usp-cfg] How to build ORCA05 case and create input files
15:21 Tag change on System Team/Agenda/2019-09-05 by acc
Tags VC added
12:46 Changeset [11494] by mathiot

ENHANCE-02_ISF: switch on isf param in WED025 and fix bugs in isf param code + cosmetic changes (ticket #2142)

2019-09-02:

20:03 Changeset [11493] by smueller

Revision of the method for determining the test revision in the identictest test to bring it in line with the method used in other tests (ticket #2302)

19:39 Changeset [11492] by smueller

Ensuring of output from the identictest test for all variants of incomplete tests (ticket #2302)

19:10 Changeset [11491] by smueller

Reverting of [11490] (ticket #2302)

18:59 Changeset [11490] by smueller

Ensuring of output from the test for all variants of incomplete tests (ticket #2302)

18:04 New topic on Interfaces created by emalod
[OASIS] NEMO 4.0 / OASIS3-MCT 4.0 compatibility
15:30 Changeset [11489] by mathiot

ENHANCE-02_ISF: move ln_isf out of namsbc and add an easy way to run with isf cavity and no ice shelf melt (ticket #2142)

12:29 Tag change on System Team/Agenda/2019-12-10 by clevy
Tags VC added

2019-08-30:

20:45 Ticket #2231 (Failure of ORCA2_ICE_PISCES SETTE test) closed by smueller
fixed: The reported SETTE test failure appears to be resolved by [10808] and …
19:59 Changeset [11488] by mathiot

ENHANCE-02_ISF: mask isf output in the open ocean + activation of bdy and tide in WED025 (ticket #2142)

16:59 Changeset [11487] by mathiot

ENHANCE-02_ISF: add WED025 configuration (si3, bdy, isf, tide), (ticket #2142)

16:57 Changeset [11486] by mathiot

ENHANCE-02_ISF: bug on top drag coeficient value (ticket #2142)

11:31 Scientific Advisory Board/Agenda/2019-09-12 edited by epico
(diff)

2019-08-29:

15:05 Changeset [11485] by andmirek

Ticket #2195 add namelist variable enabling using XIOS to read tsd

14:58 Changeset [11484] by timgraham

Merge in changes from GMED ticket 408 - Richard's fix for compatibility with OASIS-MCT v4.0

14:40 2019WP/HPC-11_Mirek_Andrejczuk_IO_with_XIOS edited by andmirek
(diff)
14:39 2019WP/HPC-05_Mirek Andrejczuk_IOdev edited by andmirek
(diff)
14:07 Changeset [11483] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Update more header comments and change logs.
Also remove debugging output from trcstp.F90 and correct bug in step_c1d.F90. Note C1D untested in this branch.

13:15 Changeset [11482] by andmirek

Ticket #2195 read initial conditions with XIOS

11:29 Changeset [11481] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Delete this branch of branch as changes now merged into main branch.

11:23 Changeset [11480] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Merge in changes from branch of branch.
Main changes:

  1. "nxt" modules renamed as "atf" and now just do Asselin time filtering. The time level swapping is achieved by swapping indices.
  2. Some additional prognostic grid variables changed to use a time dimension.

Notes:

  1. This merged branch passes SETTE tests but does not identical results to the SETTE tests with the trunk@10721 unless minor bugs to do with Euler timestepping and the OFF timestepping are fixed in the trunk (NEMO tickets #2310 and #2311).
  2. The nn_dttrc > 1 option for TOP (TOP has a different timestep to OCE) doesn't work. But it doesn't work in the trunk or NEMO 4.0 release either.
09:20 Scientific Advisory Board/Agenda/2019-09-12 edited by vancop
(diff)

2019-08-28:

18:05 Scientific Advisory Board/Agenda/2019-09-12 edited by rblod
(diff)
18:02 Scientific Advisory Board/Agenda/2019-09-12 edited by emanuelaclementi
(diff)
17:43 Scientific Advisory Board/Agenda/2019-09-12 edited by mikebell
(diff)
17:39 Scientific Advisory Board/Agenda/2019-09-12 edited by mikebell
(diff)
17:24 Changeset [11479] by dancopsey

Allocate space for a_i_last_couple after number of ice categories has been loaded.

16:24 Scientific Advisory Board/Agenda/2019-09-12 edited by diovino
(diff)
14:06 New topic on Jobs created by mathiot
[post-doc] Ocean Modeller - Overflows | Closing 8 Sep. 2019
11:56 New topic on Interfaces created by anithagera
[AGRIF] ORCA2_ICE_PISCES error with trc_dta_ini
11:30 Changeset [11478] by mattmartin

Include initial version of updated pressure correction by Mike Bell.

11:27 Changeset [11477] by mattmartin

Update the pressure correction bias scheme

10:02 Changeset [11476] by andmirek

ticket #2314 merge last GO8 branch

09:22 Changeset [11475] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap : Update header comments etc
and rename dom_vvl_sf_swp → dom_vvl_sf_update.

2019-08-27:

18:50 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
(diff)
18:23 Changeset [11474] by andmirek

Ticket #2314 merge NEMO_4.0_old_tidal_mixing

17:15 Changeset [11473] by andmirek

Ticket #2314 rename MO intel architecture file

16:42 Changeset [11472] by andmirek

ticket #2314 merge NEMO_4.0_GO6_mixing

16:38 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
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16:31 Changeset [11471] by andmirek

Branch for ticket #2314

16:28 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
(diff)
16:26 Ticket #2314 (NEMO_SI3_decoupled) created by andmirek
==== Context Reference branch for work on GO8 configuration to have …
15:30 Working Groups/Kernel edited by mikebell
(diff)
15:17 Working Groups/Kernel/Members Aug2019 created by mikebell
15:06 AlexVertCoordsMay2018.pdf attached to Working Groups/Kernel by mikebell
Notes on vertical coordinates: Alex Megann May 2018
15:03 AlexVertCoordsMay2018.pptx attached to Working Groups/Kernel by mikebell
Notes on vertical coordinates: Alex Megann May 2018
15:02 Working Groups/Kernel edited by mikebell
(diff)
15:00 zitlde_webex_30may2018.pdf attached to Working Groups/Kernel by mikebell
Notes on z tilde: Jerome Chanut May 2018
14:58 Working Groups/Kernel edited by mikebell
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14:56 gurvan_notes_tiling_Jan2019.pdf attached to Working Groups/Kernel by mikebell
Notes tiling: Gurvan Jan 2019
14:54 NEMO_kernel_WG_30_May_2018.2.pdf attached to Working Groups/Kernel by mikebell
Notes kernel WG on 30 May 2018
14:54 NEMO_kernel_WG_30_May_2018.pdf attached to Working Groups/Kernel by mikebell
Notes kernel WG on 30 May 2018
14:54 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
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14:49 Working Groups/Kernel edited by mikebell
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14:47 NEMO_Finite_volume_pressure_forces_MikeBell_Jul_2018.pdf attached to Working Groups/Kernel by mikebell
Proposals for pressure forces in NEMO: Mike Bell June 2018
14:46 gurvan_notes_timestepping_Apr2018.pdf attached to Working Groups/Kernel by mikebell
Notes on 2LTS: Gurvan Madec April 2018
14:44 dave_immerse_pseudo_code_v2.pdf attached to Working Groups/Kernel by mikebell
Notes on 2LTS: Dave Storkey Feb 2019
14:40 Working Groups/Kernel edited by mikebell
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14:27 Working Groups/Kernel edited by mikebell
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14:22 Working Groups/Kernel edited by mikebell
(diff)
14:08 dave_immerse_pseudo_code_v2 (1).pdf attached to Working Groups/Kernel by mikebell
Notes on 2LTS: Dave Storkey Feb 2019
14:08 gurvan_notes_tiling_Jan2019 (1).pdf attached to Working Groups/Kernel by mikebell
Notes tiling: Gurvan Jan 2019
14:07 Large_code_change_plannning_22_Feb_2019-1.2.pdf attached to Working Groups/Kernel by mikebell
Minutes coordination large scale changes: Mike Bell Feb 2019
14:07 Large_code_change_plannning_22_Feb_2019-1.pdf attached to Working Groups/Kernel by mikebell
Minutes coordination large scale changes: Mike Bell Feb 2019
14:04 Notes_2LTS_NOC_July_2018_v2.pdf attached to Working Groups/Kernel by mikebell
Minutes coordination of 2LTS coding: Mike Bell July 2018
14:02 Exposé_16April2018_last.pdf attached to Working Groups/Kernel by mikebell
Notes on 2LTS: Gurvan Madec April 2018
14:01 NEMO_kernel_Bottom_friction_jerome.pdf attached to Working Groups/Kernel by mikebell
Bottom friction projection onto barotropic mode: Jerome Chanut: Oct 2018
13:59 NEMO_Kernel_WG_Jan_2018.pdf attached to Working Groups/Kernel by mikebell
Terms of Reference for NEMO Kernel WG
13:57 NEMO_kernel_WG_201901_stock_take.pdf attached to Working Groups/Kernel by mikebell
Presentation on Kernel WG to NDC January 2019
13:54 Working Groups/Kernel edited by mikebell
(diff)
11:37 Ticket #2313 (Possible uninitialised variables in sbccpl) created by timgraham
==== Context In the following lines of code the syntax in the ELSE IF …

2019-08-26:

10:49 Working Groups/Kernel created by clevy

2019-08-23:

19:59 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
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19:46 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
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19:12 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller
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14:37 Working Groups/HPC edited by mikebell
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14:37 Working Groups/HPC edited by mikebell
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14:35 NEMO_HPC_WG_201901_stock_take.2.pdf attached to Working Groups/HPC by mikebell
NEMO HPC WG stock take (power point presented at Developers Committee)
14:35 NEMO_HPC_WG_201901_stock_take.pdf attached to Working Groups/HPC by mikebell
NEMO HPC WG stock take (power point presented at Developers Committee)
14:16 Working Groups/HPC edited by mikebell
(diff)
14:14 Stock_take_NEMO_HPC_WG_v0.3.pdf attached to Working Groups/HPC by mikebell
NEMO HPC WG stock take (15 Jan 2019)
14:05 Working Groups/HPC/Members June2019 edited by mikebell
(diff)
12:23 Changeset [11470] by kingr

Branch to test SLA assim changes in NWS

12:13 Working Groups/HPC/Members June2019 edited by mikebell
(diff)
11:53 Working Groups/HPC/Members June2019 created by mikebell
11:49 Working Groups/HPC edited by mikebell
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11:49 Working Groups/HPC/Members2018 created by mikebell
11:47 Working Groups/HPC edited by mikebell
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11:43 Working Groups/HPC edited by mikebell
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11:40 NEMO_HPC_WG_June_2019_final.pdf attached to Working Groups/HPC by mikebell
NEMO HPC WG objectives & activities June 2019
11:39 Working Groups/HPC edited by mikebell
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11:38 Working Groups/HPC/Home Page2014 created by mikebell
11:12 Working Groups/HPC edited by mikebell
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11:09 Working Groups/HPC/Main Activities2018 created by mikebell
11:05 Working Groups/HPC edited by mikebell
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11:02 Working Groups/HPC edited by mikebell
Regrouping the page (diff)
10:38 Changeset [11469] by mattmartin

Remove branch which has been merged into the main obs oper branch.

10:37 Changeset [11468] by mattmartin

Merged changes to allow writing of climatological information to feedback files.

2019-08-22:

11:49 Changeset [11467] by andmirek

Ticket #2197 allocate arrays at the beggining of the run

2019-08-21:

18:32 Scientific Advisory Board/Agenda/2019-01-23 edited by mikebell
added minutes from the meeting (diff)
18:31 Scientific Advisory Board/Agenda/2019-01-23 edited by mikebell
(diff)
18:23 NEMO_DevComm_Minutes_20190123_20190204.2.pdf attached to Scientific Advisory Board/Agenda/2019-01-23 by mikebell
Minutes NEMO Developers' Committee meeting Jan / Feb 2019
18:23 NEMO_DevComm_Minutes_20190123_20190204.pdf attached to Scientific Advisory Board/Agenda/2019-01-23 by mikebell
Minutes NEMO Developers' Committee meeting Jan / Feb 2019
09:18 Changeset [11466] by davestorkey

dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap: Bug fixes for ssh_atf routine in sshwzv.

2019-08-20:

18:03 Changeset [11465] by acc

Branch dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap. Update VORTEX/MY_SRC/domvvl.F90 to be compatible with time swapping changes; now passes SETTE tests

15:39 Changeset [11464] by mattmartin

Commit changes which are in one of Jennie's orca12 branches.

14:14 Changeset [11463] by acc

Branch: dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps_rewrite_time_filterswap. Minor bugfix in step.F90 to enable AGRIF SETTE tests to run. Also merged prettification changes to NST routines from the dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps branch. Neither AGRIF_DEMO nor VORTEX restart perfectly (drifting after 8 and 121 timesteps, respectively).

12:45 Changeset [11462] by kingr

Changes committed back to dev_r5518_obs_oper_update

12:41 Changeset [11461] by kingr

Updated check on min obs depth to use 3D depth array.

11:41 Changeset [11460] by mattmartin

Minor changes.

10:59 Changeset [11459] by cetlod

Revision in chapter TRA : mainly removal obsolete CPP keys and update of namelist parameter

10:32 Changeset [11458] by cguiavarch

Read mmpmask from domain_cfg instead of bottom_level

10:20 Changeset [11457] by cguiavarch

Create a branch to read a mppmask instead of bottom level to remove processor

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