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2010WP/2010Stream3 (diff) – NEMO

Changes between Version 4 and Version 5 of 2010WP/2010Stream3


Ignore:
Timestamp:
2009-11-05T14:24:59+01:00 (14 years ago)
Author:
acc
Comment:

--

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  • 2010WP/2010Stream3

    v4 v5  
    2626---- 
    2727 
    28 == '''S3.2 : from NOCS-NEMO team (short-term)''' == 
     28'''From NOCS-NEMO team (short-term)''' == 
    2929[[BR]] 
     30=== S1.0-a - User Interface === 
     31         '''Motivation:''' Shared daily support to users, web & paper documentation. A reduction in the Paris system team this year will necessitate greater sharing of these responsibilities between the disptributed system team members [[BR]] 
     32         '''Principal Investigator :''' Andrew Coward (acc@noc.soton.ac.uk) [[BR]] 
    3033 
    31 === S3.2-a — Revisit of surface mass and salt fluxes === 
    32          '''Motivation:''' As a consequence of the embedding of sea-ice into the ocean (see S3.2-b), the total mass of salt of the combined sea-ice/ocean system is conserved by removing a volume of water from the ocean when ice forms or adding a volume of water when it melts.  When ice forms, salt contained in the water is returned to the ocean, less the salt retained in the ice itself.  When ice melts, the salt contained is added back to the ocean.[[BR]] 
     34=== S1.5-a - Review of new documentation  === 
     35         '''Motivation:''' The exchange and proof-reading of new documentation  between system team sites before release should ensure consistency of style, readability and accuracy.[[BR]] 
     36         '''Status :''' Carried over from 2009 but expected to start as soon as new documentation is submitted.[[BR]] 
     37         '''Principal Investigator :''' Steven Alderson (sga@noc.soton.ac.uk) [[BR]] 
     38[[BR]] 
     39=== S3.2-a — Revisit of mass and salt fluxes between ice, ocean and air === 
     40         '''Motivation:''' As a consequence of the embedding of sea-ice into the ocean (see S3.2-b), the total mass of salt of the combined sea-ice/ocean system is 
     41         conserved by removing a volume of water from the ocean when ice forms or adding a volume of water when it melts.  When ice forms, salt contained 
     42         in the water is returned to the ocean, less the salt retained in the ice itself.  When ice melts, the salt contained is added back to the ocean. (NOCS team, 3wk)[[BR]] 
    3343         '''Status :''' Carried over from 2009 but work is well advanced. Full testing and documentation will be complete for 3.3 release [[BR]] 
    3444         '''Principal Investigator :''' Yevgeny Aksenov (yka@noc.soton.ac.uk) [[BR]] 
    3545 
    3646=== S3.2-b — Embedding sea-ice inside the ocean === 
    37          '''Motivation:''' To improve the coupling between the sea-ice and ocean models, we embed the sea-ice into the ocean by changing the volume of the ocean and depressing the ocean interface by a depth equal to the mean ice draft.   
    38          The latter is calculated as the water equivalent of the total ice and snow mass in the model grid box using in-situ local densities of seawater.   
    39          The pressure gradient that takes into account the total weight of sea ice and snow in the top model grid box is added to the ocean momentum budget.  
    40          The vertical coordinate is redefined for the whole water column.[[BR]] 
    41          '''Status :''' During 2009 the above scheme was implemented and tested at NOCS in a 100-year long integration of an ORCA2-LIM2 configuration using both  
    42          linear and non-linear free surface options.   
    43          It was also tested for short runs in the ORCA2-LIM3 configurations.   
    44          A longer run in ORCA2-LIM3 will take place early in 2010 and the code committed for the NEMO 3.3 release. 
     47         '''Motivation:''' Replace the unrealistic 'levitating' ice[[BR]] 
     48         '''Main task:''' [[BR]] 
     49         (1) To improve the coupling between the sea-ice and ocean models, we embed the sea-ice into the ocean by changing the volume of 
     50         the ocean and depressing the ocean interface by a depth equal to the mean ice draft. 
     51         The latter is calculated as the water equivalent of the total ice and snow mass in the model grid box using in-situ local densities of seawater. 
     52         The pressure gradient that takes into account the total weight of sea ice and snow in the top model grid box is added to the ocean momentum budget. 
     53         The vertical coordinate is redefined for the whole water column. (v3.3) (NOCS team, 4wk)[[BR]] 
     54         '''Status :''' During 2009 the above scheme was implemented and tested at NOCS in a 100-year long integration of an ORCA2-LIM2 configuration using both 
     55         linear and non-linear free surface options. 
     56         It was also tested for short runs in the ORCA2-LIM3 configurations. 
     57         A longer run in ORCA2-LIM3 will take place early in 2010 and the code committed for the NEMO 3.3 release.[[BR]] 
    4558         '''Principal Investigator :''' Yevgeny Aksenov (yka@noc.soton.ac.uk) [[BR]] 
    46  
    4759=== S3.2-c — Embedding sea-ice inside the ocean for CICE === 
    48         '''Motivation:'''  Similar changes will have to be made in order to fully embed CICE-modelled sea-ice. Subtle differences and problems may arise because of the B-grid basis of CICE. This work is listed separately to ensure that possible delays will not impact on the delivery of an embedded solution for LIM in 3.3 
     60        '''Motivation:'''  Similar changes will have to be made in order to fully embed CICE-modelled sea-ice. Subtle differences and problems may arise because of the B-grid basis of CICE. This work is listed separately to ensure that possible delays will not impact on the delivery of an embedded solution for LIM (v3.3) (NOCS team, 3wk)[[BR]] 
    4961         '''Principal Investigator :''' Yevgeny Aksenov (yka@noc.soton.ac.uk) [[BR]] 
    5062 
    5163=== S3.2-d — Lateral ocean physics === 
     64        '''Motivation:'''  Griffies's implementation of the Gent and  McWilliams eddy transport as a skew flux is being implemented. This has the advantage that  its numerical discretization can be written in terms of contributions  from quarter cells – ‘triads’. This gives a tighter stencil,  disallowing 2-gridpoint numerical noise that is permitted by the  advective discretization. [[BR]] 
     65        '''Main task:'''  [[BR]] 
     66                          (1) Discretise Isopycnal diffusion in terms of these triads. This will obviate the need to smooth  isopycnal slopes horizontally with a Shapiro filter (as currently  implemented in NEMO), or to apply a background horizontal diffusivity  that mixes diapycnally. [[BR]] 
     67                          (2) Implement Visbeck et al.'s formulation of spatially varying  diffusivities as an alternative to the current formulation based on the Held and Larichev timescale and the Rossby radius as a  lengthscale. [[BR]] 
     68                          (3) Add a slope limiting algorithm (mixed-layer depth is sensitive to the slope limiting that  is employed) that  behaves satisfactorily within and immediately below the mixed layer. (v3.3) (NOCS team, 4wk)[[BR]] 
     69        '''Status: ''' A working prototype code for the iso-neutral and skew-flux operator was carefully reviewed in 2009. Considerable care has been taken in the formulation to ensure the tensorial representation is consistent with the variable volume layers (S-coordinate/z* representation). This has been documented and will be provided with the release.   [[BR]] 
     70        '''Principal Investigator :''' George Nurser (agn@noc.soton.ac.uk) [[BR]] 
    5271 
    53         '''Motivation:'''  Griffies's implementation of the Gent and  McWilliams eddy transport as a skew flux is being implemented. This has the advantage that  its numerical discretization can be written in terms of contributions  from quarter cells – ‘triads’. This gives a tighter stencil,  disallowing 2-gridpoint numerical noise that is permitted by the  advective discretization. Isopycnal diffusion is also being  discretized in terms of these triads, obviating the need to smooth  isopycnal slopes horizontally with a Shapiro filter (as currently  implemented in NEMO), or apply a background horizontal diffusivity  that would mix diapycnally. Visbeck et al.'s formulation of spatially varying  diffusivities is also being implemented, as an alternative to the current formulation based on  the Held and Larichev timescale and the Rossby radius as a  lengthscale. Mixed-layer depth is sensitive to the slope limiting that  is employed, and a slope limiting algorithm will be added that  behaves satisfactorily within and immediately below the mixed layer. [[BR]] 
     72=== S3.2-e — Improved thermodynamics for LIM3 === 
     73        '''Motivation:'''  Enhancement of lateral melting paramerisations[[BR]] 
     74        '''Main task:'''  [[BR]] 
     75                        (1) New parameterisations for lateral melting processes will be incorporated including parameterisations for the effects of waves on fragmentation and melting. (NOCS team, 8wk) [[BR]] 
     76        '''Principal Investigator :''' Yevgeny Aksenov (yka@noc.soton.ac.uk) [[BR]] 
    5477 
    55         '''Status: ''' A working prototype code for the iso-neutral and skew-flux operator was carefully reviewed in 2009. An final version will be ready for the 3.3 release. Considerable care has been taken in the formulation to ensure the tensorial representation is consistent with the variable volume layers (S-coordinate/z* representation). This has been documented and will be provided with the release.   [[BR]] 
    56         '''Principal Investigator :''' George Nurser (agn@noc.soton.ac.uk) [[BR]] 
     78=== S3.2-f —  Rationalisation of support for ORCA configurations === 
     79        '''Motivation:'''  A cleaning and enhancement of code support for global (ORCA) configurations is required to introduce configurations in common use across the community. [[BR]] 
     80        '''Main task:''' [[BR]] 
     81                          (1) Support will be improved or added for ORCA1, ORCA05, ORCA025 and ORCA_R12 configurations in such a way that multiple vertical resolutions of each can be maintained. [[BR]] 
     82                          (2) The use of .h90 files will also be suppressed. (NOCS team, 4wk) [[BR]] 
     83        '''Principal Investigator :''' Andrew Coward (acc@noc.soton.ac.uk) [[BR]] 
     84 
     85=== S3.2-g —  Improvement of numerical treatment for vertical diffusion === 
     86        '''Motivation:'''  An improvement in the numerical treatment of vertical diffusion can be achieved by replacing the fully implicit scheme with a Crank-Nicholson 
     87scheme. This approach is widely used in other ocean models (e.g. ROMS) and can be implemented relatively simply. 
     88        '''Main task:''' [[BR]] 
     89                          (1) The replacement scheme will be implemented and its performance tested. [[BR]] 
     90                          (2) A similar scheme will also be implemented for the bottom friction contribution to the barotropic momentum trend in dynspg_ts. (NOCS team, 1wk)[[BR]] 
     91        '''Principal Investigator :''' Andrew Coward (acc@noc.soton.ac.uk) [[BR]] 
     92 
     93=== S3.2-h —  Implementation of the Neptune effect parameterisation === 
     94        '''Motivation:'''  The Neptune effect (Holloway 1992) is a well established parameterisation of the interaction of eddies with topography. The parameterisation is often seen as essential in Arctic ocean simulations even in high resolution models. [[BR]] 
     95        '''Main task:''' [[BR]] 
     96                          (1) Add the parameterisation to the reference code [[BR]] 
     97                          (2) Test, document  and report (v3.3) (NOCS team, 5wk)[[BR]] 
     98        '''Principal Investigator :''' Jeff Blundell (jeff@noc.soton.ac.uk) [[BR]] 
     99 
     100=== S3.2-h —  Implementation of spectral nudging === 
     101        '''Motivation:'''  Work by our Canadian colleagues has demonstrated the potentail benefits of spectral nudging techniques to restore large scale gradients without suppressing meso-scale activity. [[BR]] 
     102        '''Main task'''[[BR]] 
     103                          (1) The v2.3 solution will be obtained and implemented in the reference code (v3.3) (NOCS team, 6wk)[[BR]] 
     104        '''Principal Investigator :''' Jeff Blundell (jeff@noc.soton.ac.uk) [[BR]] 
     105 
    57106 
    58107----