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2011WP/2011Action_institutions_LOCEAN (diff) – NEMO

Changes between Version 7 and Version 8 of 2011WP/2011Action_institutions_LOCEAN


Ignore:
Timestamp:
2010-10-08T10:26:14+02:00 (14 years ago)
Author:
rblod
Comment:

--

Legend:

Unmodified
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  • 2011WP/2011Action_institutions_LOCEAN

    v7 v8  
    99||Rachid Benshila||LOCEAN-IPSL, Paris||100||CNRS|| 
    1010||Christian Ethé||IPSL, Paris||50||CNRS|| 
    11 ||Simona Flavoni||LOCEAN-IPSL, Paris||100||CNRS-INSU 1 year contract|| 
     11||Simona Flavoni||LOCEAN-IPSL, Paris||100||CNRS|| 
    1212||Claire Lévy||LOCEAN-IPSL, Paris||100||NEMO project Manager|| 
    1313||Bénédicte Lemieux||LEGI - Grenoble||50||CNRS 2 years contract        (Arrived in Oct. 2009)|| 
    … …  
    2222 
    2323||Action||Brief description||Status||Branch name||Trac ticket n°||Wiki page name||Reviewer(s)||Review status||Ready for merge|| 
    24 ||LOCEAN-1||a devlt|||||||||||||||| 
     24||LOCEAN-1||Mpp evolution|||||||||||||||| 
     25||LOCEAN-2||Coupled interface|||||||||||||||| 
     26||LOCEAN-3||Merge TRA-TRP|||||||||||||||| 
     27||LOCEAN-4||Refence Manuels|||||||||||||||| 
     28||LOCEAN-5||Update OBC|||||||||||||||| 
     29||LOCEAN-6||Update IOserver|||||||||||||||| 
     30||LOCEAN-7||NVTK|||||||||||||||| 
     31||LOCEAN-8||New vertical coordinate|||||||||||||||| 
     32||LOCEAN-9||Agrif on vertical|||||||||||||||| 
     33||LOCEAN-10||Agrif on sea-ice|||||||||||||||| 
     34||LOCEAN-11||Fox-Kemper parametrization|||||||||||||||| 
     35||LOCEAN-12||Suppression of lLOBSTER|||||||||||||||| 
     36||LOCEAN-13||VVL by default|||||||||||||||| 
     37||LOCEAN-external||ORCA2_LIM based on NEMO|||||||||||||||| 
     38||LOCEAN-external||Configuration manager|||||||||||||||| 
     39||LOCEAN-external||Development of TAM|||||||||||||||| 
    2540 
    2641---- 
    27 === '''LOCEAN .1 —MPP evolution' (continuation''  === 
    28   '''Motivation: ''' Improve the mpp behaviour of NEMO by playing with width of the overlap area, the number of communication,[[BR]] 
    29   '''Status :''' [[BR]]  
    30   '''Main tasks :'''    [[BR]] 
    31   '''Science Reviewer:''' [[BR]] 
    32   '''System Reviewer:''' [[BR]] 
    33   '''Deadline:''' [[BR]] 
    34   '''Priority:'''[[BR]] 
    35   '''Principal Investigator : '''Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr) [[BR]] 
     42=== '''LOCEAN .1 —MPP evolution' (continuation''''''' === 
     43  '''Motivation: ''' Improve the mpp behaviour of NEMO by playing with width of the overlap area, the number of communication,[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Depends on:'''[[BR]] '''Principal Investigator : '''Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr) [[BR]] 
    3644 
    37 === '''LOCEAN .2 —Coupled interface (end)'''  === 
    38   '''Motivation: ''' Improve the mpp behaviour of NEMO by playing with width of the overlap area, the number of communication,[[BR]] 
    39   '''Status :''' [[BR]]  
    40   '''Main tasks :'''    [[BR]] 
    41   (1) documentation of the coupled surface module (25 June)[[BR]] 
    42   (2) coupling with multi-categories ice model (coll. UKMO)[[BR]] 
    43   '''Science Reviewer:''' [[BR]] 
    44   '''System Reviewer:''' [[BR]] 
    45   '''Deadline:''' [[BR]] 
    46   '''Priority:'''[[BR]] 
    47   '''Principal Investigator : '''Sebastien Masson (smasson@locean-ipsl.upmc.fr)  [[BR]] 
     45=== '''LOCEAN .2 —Coupled interface (end)''' === 
     46  '''Motivation: ''' Improve the mpp behaviour of NEMO by playing with width of the overlap area, the number of communication,[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] (1) documentation of the coupled surface module (25 June)[[BR]] (2) coupling with multi-categories ice model (coll. UKMO)[[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : '''Sebastien Masson (smasson@locean-ipsl.upmc.fr)  [[BR]] 
    4847 
    49 === '''LOCEAN .3 —Merge TRA-TRP (end)'''  === 
    50   '''Motivation: '''Merge of active and passive tracer advection/diffusion modules to avoid duplication of almost identical modules[[BR]] 
    51   '''Status :''' [[BR]]  
    52   '''Main tasks :'''    [[BR]] 
    53   (1) apply the merge for OBC, BDY,AGRIF[[BR]] 
    54   (2) suppress T and S array to switch to 4d arrays[[BR]] 
    55   '''Science Reviewer:''' [[BR]] 
    56   '''System Reviewer:''' [[BR]] 
    57   '''Deadline:''' [[BR]] 
    58   '''Priority:'''[[BR]] 
    59   '''Principal Investigator : '''Christian Ethé (cetlod@ipsl.jussieu.fr)   [[BR]] 
     48=== '''LOCEAN .3 —Merge TRA-TRP (end)''' === 
     49  '''Motivation: '''Merge of active and passive tracer advection/diffusion modules to avoid duplication of almost identical modules[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] (1) apply the merge for OBC, BDY,AGRIF[[BR]] (2) suppress T and S array to switch to 4d arrays[[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : '''Christian Ethé (cetlod@ipsl.jussieu.fr)   [[BR]] 
    6050 
    61 === '''LOCEAN .4 —reference manuels (continuation)'''  === 
    62   '''Motivation: '''paper documentation a never-ending story[[BR]] 
    63   '''Status :''' [[BR]]  
    64   '''Main tasks :'''    [[BR]] 
    65   (1) Create the TRP documentation using Latex (similar to the NEMO ocean engine documentation)[[BR]] 
    66   (2) update NEMO/OPA documentation[[BR]] 
    67   (3) review of the written documentation (NOCS team) 
    68   '''Science Reviewer:''' [[BR]] 
    69   '''System Reviewer:''' [[BR]] 
    70   '''Deadline:''' [[BR]] 
    71   '''Priority:'''[[BR]] 
    72   '''Principal Investigator : '''Christian Ethé (cetlod@ipsl.jussieu.fr)   [[BR]] 
     51=== '''LOCEAN .4 —reference manuels (continuation)''' === 
     52  '''Motivation: '''paper documentation a never-ending story[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] (1) Create the TRP documentation using Latex (similar to the NEMO ocean engine documentation)[[BR]] (2) update NEMO/OPA documentation[[BR]] (3) review of the written documentation (NOCS team) '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : '''Christian Ethé (cetlod@ipsl.jussieu.fr)   [[BR]] 
    7353 
    74 === '''LOCEAN .5 —updating OBC'''  === 
    75   '''Motivation: '''OBC needs to be revisited to work with explicit free surface. It could be the opportunity to rewrite the whole routine, using fldread for OBC inputs, and maybe a generalized treatment for all boundaries.[[BR]] 
    76   '''Status :''' [[BR]]  
    77   '''Main tasks :'''    [[BR]] 
    78   write a generic routine [[BR]] 
    79   '''Science Reviewer:''' [[BR]] 
    80   '''System Reviewer:''' [[BR]] 
    81   '''Deadline:''' [[BR]] 
    82   '''Priority:'''[[BR]] 
    83   '''Principal Investigator : ''' Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr)    [[BR]] 
     54=== '''LOCEAN .5 —updating OBC''' === 
     55  '''Motivation: '''OBC needs to be revisited to work with explicit free surface. It could be the opportunity to rewrite the whole routine, using fldread for OBC inputs, and maybe a generalized treatment for all boundaries.[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] write a generic routine [[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : ''' Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr)    [[BR]] 
    8456 
    85 === '''LOCEAN .6 —update the IOSERVER'''  === 
    86   '''Motivation: '''the IOSERVER is being rewritten to sosolve performance issues .[[BR]] 
    87   '''Status :''' [[BR]]  
    88   '''Main tasks :'''    [[BR]] 
    89   if achieved, integrate the new version  [[BR]] 
    90   '''Science Reviewer:''' [[BR]] 
    91   '''System Reviewer:''' [[BR]] 
    92   '''Deadline:''' [[BR]] 
    93   '''Priority:'''[[BR]] 
    94   '''Principal Investigator : ''' Sebastien Masson (smasson@locean-ipsl.upmc.fr)   [[BR]] 
     57=== '''LOCEAN .6 —update the IOSERVER''' === 
     58  '''Motivation: '''the IOSERVER is being rewritten to sosolve performance issues .[[BR]] '''Status :''' [[BR]]  '''Main tasks :'''    [[BR]] if achieved, integrate the new version  [[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : ''' Sebastien Masson (smasson@locean-ipsl.upmc.fr)   [[BR]] 
    9559 
    96 === '''LOCEAN .7 —rewrite NVTK'''  === 
    97   '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
    98   '''Status :''' [[BR]]  
    99   '''Main tasks :'''    [[BR]] 
     60=== '''LOCEAN .7 —rewrite NVTK''' === 
     61  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     62  '''Status :''' [[BR]] 
     63  '''Main tasks :'''    [[BR]]  
    10064  (1) definition of the functionalities [[BR]] 
    10165  (2) implementation[[BR]] 
    102  '''Science Reviewer:''' [[BR]] 
    103   '''System Reviewer:''' [[BR]] 
    104   '''Deadline:''' [[BR]] 
    105   '''Priority:'''[[BR]] 
    106   '''Principal Investigator : ''' Simona Flavoni (flavoni@locean-ipsl.upmc.fr)   [[BR]] 
     66  '''Science Reviewer:''' [[BR]] 
     67  '''System Reviewer:''' [[BR]]  
     68  '''Deadline:''' [[BR]]  
     69  '''Priority:'''[[BR]]  
     70  '''Principal Investigator : ''' Simona Flavoni (flavoni@locean-ipsl.upmc.fr)   [[BR]] 
     71 
     72=== '''LOCEAN .8 —new vertical coordinate (continuation)''' === 
     73  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     74  '''Status :''' [[BR]] 
     75  '''Main tasks :'''    [[BR]]  
     76  (1) definition of the functionalities [[BR]] 
     77  (2) implementation[[BR]] 
     78  '''Science Reviewer:''' [[BR]] 
     79  '''System Reviewer:''' [[BR]]  
     80  '''Deadline:''' [[BR]]  
     81  '''Priority:'''[[BR]]  
     82  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
     83 
     84=== '''LOCEAN .9 —Agrif on vertical''' === 
     85  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     86  '''Status :''' [[BR]] 
     87  '''Main tasks :'''    [[BR]]  
     88  (1) definition of the functionalities [[BR]] 
     89  (2) implementation[[BR]] 
     90  '''Science Reviewer:''' [[BR]] 
     91  '''System Reviewer:''' [[BR]]  
     92  '''Deadline:''' [[BR]]  
     93  '''Priority:'''[[BR]]  
     94  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
     95 
     96=== '''LOCEAN .10 —Agrif on sea-ice''' === 
     97  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     98  '''Status :''' [[BR]] 
     99  '''Main tasks :'''    [[BR]]  
     100  (1) definition of the functionalities [[BR]] 
     101  (2) implementation[[BR]] 
     102  '''Science Reviewer:''' [[BR]] 
     103  '''System Reviewer:''' [[BR]]  
     104  '''Deadline:''' [[BR]]  
     105  '''Priority:'''[[BR]]  
     106  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
     107 
     108=== '''LOCEAN .11 —Fox-Kemper parametrization''' === 
     109  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     110  '''Status :''' [[BR]] 
     111  '''Main tasks :'''    [[BR]]  
     112  (1) definition of the functionalities [[BR]] 
     113  (2) implementation[[BR]] 
     114  '''Science Reviewer:''' [[BR]] 
     115  '''System Reviewer:''' [[BR]]  
     116  '''Deadline:''' [[BR]]  
     117  '''Priority:'''[[BR]]  
     118  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
     119 
     120=== '''LOCEAN .12 —Suppress Lobster''' === 
     121  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     122  '''Status :''' [[BR]] 
     123  '''Main tasks :'''    [[BR]]  
     124  (1) definition of the functionalities [[BR]] 
     125  (2) implementation[[BR]] 
     126  '''Science Reviewer:''' [[BR]] 
     127  '''System Reviewer:''' [[BR]]  
     128  '''Deadline:''' [[BR]]  
     129  '''Priority:'''[[BR]]  
     130  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
     131 
     132=== '''LOCEAN .13 —Non-linear free surface by default''' === 
     133  '''Motivation: '''the test suite has to be totally revisited for portability and an easy addition of new tests .[[BR]] 
     134  '''Status :''' [[BR]] 
     135  '''Main tasks :'''    [[BR]]  
     136  (1) definition of the functionalities [[BR]] 
     137  (2) implementation[[BR]] 
     138  '''Science Reviewer:''' [[BR]] 
     139  '''System Reviewer:''' [[BR]]  
     140  '''Deadline:''' [[BR]]  
     141  '''Priority:'''[[BR]]  
     142  '''Principal Investigator : ''' Matthieu Leclair (matthieu.leclair@locean-ipsl.upmc.fr)   [[BR]] 
    107143 
    108144 
    109 === '''LOCEAN .external —ORCA2-LIM based on NEMO (continuation))'''  === 
    110   '''Motivation: '''Provide to all groups using NEMO in coupled O/I/A simulations a reference set of forced experiments that document the effect of various physical package as well as the changes from the OPA8 to NEMO with respect to the ocean and ice components (and possibly PISCES). This is part of the IsENES EU project. [[BR]] 
    111   '''Status :'''ORCA2-LIM2 configuration (bathy, physics) has been updated, and Standard output for IPCC runs using IOM(v3.2). An environment has been developed to run long forced and coupled experiments together with the creation of standard control plots. Simulations have been performed (reference CORE2 normal year and interannual simulations )[[BR]]  
    112   '''Main tasks :'''    [[BR]] 
    113   (1) ORCA2-LIM3 configuration, coll. with UCL (5 wk) (v3.4). [[BR]] 
    114   (2) Web and paper documentations of the behaviour found[[BR]] 
    115   (3) Possibly reference experiment with other resolution (ORCA1, 05, 025…) (v3.X) [BR]] 
    116   (4) Possibly reference experiment with ORCA2-LIM-PISCES (v3.X) [BR]] 
    117   '''Science Reviewer:''' [[BR]] 
    118   '''System Reviewer:''' [[BR]] 
    119   '''Deadline:''' [[BR]] 
    120   '''Priority:'''[[BR]] 
    121   '''Principal Investigator : '''Gurvan Madec (gm@locean-ipsl.upmc.fr)    [[BR]] 
     145 
     146=== '''LOCEAN .external —ORCA2-LIM based on NEMO (continuation))''' === 
     147  '''Motivation: '''Provide to all groups using NEMO in coupled O/I/A simulations a reference set of forced experiments that document the effect of various physical package as well as the changes from the OPA8 to NEMO with respect to the ocean and ice components (and possibly PISCES). This is part of the IsENES EU project. [[BR]] '''Status :'''ORCA2-LIM2 configuration (bathy, physics) has been updated, and Standard output for IPCC runs using IOM(v3.2). An environment has been developed to run long forced and coupled experiments together with the creation of standard control plots. Simulations have been performed (reference CORE2 normal year and interannual simulations )[[BR]]  '''Main tasks :'''    [[BR]] (1) ORCA2-LIM3 configuration, coll. with UCL (5 wk) (v3.4). [[BR]] (2) Web and paper documentations of the behaviour found[[BR]] (3) Possibly reference experiment with other resolution (ORCA1, 05, 025…) (v3.X) [BR]] (4) Possibly reference experiment with ORCA2-LIM-PISCES (v3.X) [BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator : '''Gurvan Madec (gm@locean-ipsl.upmc.fr)    [[BR]] 
    122148 
    123149=== '''LOCEAN.external — Configuration manager''' === 
    124   '''Motivation:''' Create the configuration tools (CFG-tools): user-friendly interface, the tools, and the documentation associated to the creation of a new model configuration, and especially configurations defined as a zoom of an ORCA configuration. The tools include the generation of a grid, a bathymetry, an initial state, a forcing data set, and open boundary conditions.  
    125   '''Status :''' Start in August 2009, within My_Ocean (Brice Lemaire position). Work done in collaboration with IFREMER. [[BR]] 
    126   '''main tasks :''' (50wk) [[BR]] 
    127   (1) revisit the grid generation of the AGRIF tools (6 wk) (v3.3) [[BR]] 
    128   (2) create a automatic OBC data generation (20 wk) (v3.4) [[BR]] 
    129   (3) Hand changes of the bathymetry through the Java interface developed at IFREMER (16 wk) (v3.4) [[BR]] 
    130   (4) First full version of the configuration manager (8 wk) (v3.5) [[BR]] 
    131   '''Science Reviewer:''' [[BR]] 
    132   '''System Reviewer:''' [[BR]] 
    133   '''Deadline:''' [[BR]] 
    134   '''Priority:'''[[BR]] 
    135   '''Principal Investigator :''' Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr)[[BR]] 
    136  
     150  '''Motivation:''' Create the configuration tools (CFG-tools): user-friendly interface, the tools, and the documentation associated to the creation of a new model configuration, and especially configurations defined as a zoom of an ORCA configuration. The tools include the generation of a grid, a bathymetry, an initial state, a forcing data set, and open boundary conditions.  '''Status :''' Start in August 2009, within My_Ocean (Brice Lemaire position). Work done in collaboration with IFREMER. [[BR]] '''main tasks :''' (50wk) [[BR]] (1) revisit the grid generation of the AGRIF tools (6 wk) (v3.3) [[BR]] (2) create a automatic OBC data generation (20 wk) (v3.4) [[BR]] (3) Hand changes of the bathymetry through the Java interface developed at IFREMER (16 wk) (v3.4) [[BR]] (4) First full version of the configuration manager (8 wk) (v3.5) [[BR]] '''Science Reviewer:''' [[BR]] '''System Reviewer:''' [[BR]] '''Deadline:''' [[BR]] '''Priority:'''[[BR]] '''Principal Investigator :''' Rachid Benshila (rachid.benshila@locean-ipsl.upmc.fr)[[BR]] 
    137151 
    138152=== '''LOCEAN.external — Development of TAM''' (continuation) === 
    139   '''Motivation:''' development of the Tangent and Adjoint Model (TAM) of NEMO.[[BR]] 
    140   '''Status :''' Grenoble acion (LJK, LEGI, ANR VODA), a 3 years, started in 2008, and well engaged. [[BR]] 
    141   '''main tasks :''' (20 wk) [[BR]]  
    142   (1) update the linear tangent model of NEMO/OPA and add the (existing?) validation tools. (v3.4 or v3.5) [[BR]]  
    143   (2) update the Adjoint model of NEMO/OPA and add the (existing?) validation tools. (v3.5) [[BR]]  
    144   (3) create tutorial, test cases and reference experiment (v3.5) [[BR]] '''Principal Investigator :''' Bénédicte Lemieux (email adress) [[BR]] 
     153  '''Motivation:''' development of the Tangent and Adjoint Model (TAM) of NEMO.[[BR]] '''Status :''' Grenoble acion (LJK, LEGI, ANR VODA), a 3 years, started in 2008, and well engaged. [[BR]] '''main tasks :''' (20 wk) [[BR]]  (1) update the linear tangent model of NEMO/OPA and add the (existing?) validation tools. (v3.4 or v3.5) [[BR]]  (2) update the Adjoint model of NEMO/OPA and add the (existing?) validation tools. (v3.5) [[BR]]  (3) create tutorial, test cases and reference experiment (v3.5) [[BR]] '''Principal Investigator :''' Bénédicte Lemieux (email adress) [[BR]] 
    145154 
    146 === '''''' === 
     155=== ''''''''''' === 
    147156  [[BR]][[BR]][[BR]][[BR]][[BR]]