= Acronym Definitions
These acronyms are automatically converted into HTML <acronym> elements by the [http://trac-hacks.org/wiki/AcronymsPlugin AcronymsPlugin].

== General acronyms with URL (TBD)
||'''Acronym''' ||'''Description''' ||'''URL'''
||Ada ||Sandy Bridge IBM supercomputer of IDRIS (FR), 233 TFLOPS peak ||http://www.idris.fr/eng/ada/hw-ada-eng.html ||
||AGRIF ||Adaptive Grid Refinement In Fortran ||http://www-ljk.imag.fr/MOISE/AGRIF ||
||BFM ||Biogeochemical Flux Model ||http://bfm-community.eu ||
||CEA ||Commissariat à l'Énergie Nucléaire et aux Énergies Alternatives, French public government-funded research organisation ||http://www.cea.fr/english ||
||CeCILL ||Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre], free software license compatible with GNU GPL and compliant with French law ||http://www.cecill.info ||
||CICE ||Los Alamos "sea ice" model ||http://oceans11.lanl.gov/trac/CICE ||
||CMCC ||Centro Euro-Mediterraneo sui Cambiamenti Climatici (IT) ||http://www.cmcc.it ||
||CMIP ||Coupled Model Intercomparison Project ||http://cmip-pcmdi.llnl.gov ||
||CNRS ||Centre National pour la Recherche Scientifique, French largest governmental research organisation ||http://www.cnrs.fr ||
||Curie ||Sandy Bridge Bull supercomputer of CEA, 1,5 PFLOPS peak ||http://www-hpc.cea.fr/en/complexe/tgcc-curie.htm ||
||IDRIS ||Institute for Development and Resources in Intensive Scientific computing (FR) ||http://www.idris.fr/eng ||
||INGV ||Istituto Nazionale di Geofisica e Vulcanologia (IT) ||http://www.ingv.it/en ||
||INSU ||Institut National des Sciences de l'Univers (FR), CNRS's institute for engineering and systems sciences ||http://www.insu.cnrs.fr ||
||IPSL ||Institut Pierre Simon Laplace, french federation of 9 public research laboratories involved in research on terrestrial and planetary environments ||http://www.ipsl.fr/en ||
||LGGE ||Laboratoire de Glaciologie et Géophysique de l'Environnement (FR) ||http://lgge.osug.fr/rubrique1.html?lang=en ||
||Mercator_Ocean ||Mercator Océan - Ocean Forecasters (FR) ||http://www.mercator-ocean.fr/en ||
||Met_Office ||National weather service, formerly Meteorological Office (UK) ||http://www.metoffice.gov.uk ||
||NEMO ||Nucleus for European Modelling of the Ocean ||http://www.nemo-ocean.eu ||
||NERC ||Natural Environment Research Council (UK) ||http://www.nerc.ac.uk ||
||NOC ||National Oceanography Centre (UK) ||http://noc.ac.uk ||
||OASIS ||Ocean Atmosphere Sea Ice Soil, coupling software to synchronize exchanges of information between numerical codes representing different components of the climate system  ||http://verc.enes.org/oasis ||
||PISCES ||Pelagic Interaction Scheme for Carbon and Ecosystem Studies ||http://www.lodyc.jussieu.fr/~aumont/OPA_model.html ||
||RENATER ||REseau NAtional de télécommunications pour la Technologie, l'Enseignement et la Recherche, french national telecommunications network for research and education ||http://www.renater.fr/?lang=en ||
||SVN ||SubVersioN revision control system ||http://subversion.apache.org ||
||TGCC ||Très Grand Centre de Calcul, HPC center of CEA (FR) ||http://www-hpc.cea.fr/en/complexe/tgcc.htm ||
||Trac ||web-based project management & bug tracking system ||http://trac.edgewall.org ||
||UNIBO ||University of Bologna (IT) ||http://www.unibo.it/en ||
||XIOS ||Xml Inputs Outputs Server ||http://forge.ipsl.jussieu.fr/ioserver ||

{{{#!Fold title='Technical acronyms (TBD)' tag=h2
||AMM12 ||Atlantic Margin Model with 12kms horizontal resolution ||
||BBL ||Bottom Boundary Layer ||
||BGC ||!BioGeoChemical ||
||BFR ||Bottom FRiction ||
||CLIO ||Coupled Large-scale Ice Ocean ||
||CORE ||Coordinated Ocean-ice Reference Experiments ||
||CPP ||C !PreProcessor ||
||DMP ||Damping ||
||DOC ||DOCumentation ||
||DTA ||DaTA ||
||EEN ||Energy & ENstrophy ||
||ENV ||ENVironment ||
||EOS ||Equation Of State ||
||FCM ||Flexible Configuration Manager ||
||FCT ||Flux Corrected Transport ||
||GLS ||Generic Length Scale ||
||HDF ||Horizontal !DiFfusion ||
||HPC ||High Performance Computing ||
||HPG ||Horizontal Pressure Gradient ||
||IAU ||Incremental Analysis Updating ||
||IO ||!Inputs/Outputs ||
||IOF ||Interpolation On the Fly ||
||ISF ||Ice ShelF ||
||KPP ||K-Profile Parameterization ||
||LIM ||Louvain-la-neuve sea Ice Model ||
||LOBSTER ||Lodyc Ocean Biogeochemical System for Ecosystem and Resources ||
||MP ||Merge Party ||
||MPI ||Message Passing Interface ||
||MPP ||Massive Parallel Processing ||
||MSF ||Meridional Stream Function ||
||NEMOVAR ||NEMO VARiational data assimilation ||
||OBC ||Open Boundary Conditions ||
||OFF ||OFFline ||
||ORCA ||tripolar grid, with special north fold boundary condition ||
||OPA ||"Océan PArallélisé" ocean general circulation model ||
||QSR ||Q? Solar Radiation ||
||SAS ||Stand-Alone Surface ||
||SPG ||Surface Pressure Gradient ||
||SSH ||Sea Surface Height ||
||SSS ||Sea Surface Salinity ||
||SST ||Sea Surface Temperature ||
||ST ||System Team ||
||TAM ||Tangent and Adjoint Model ||
||TKE ||Turbulent Kinetic Energy ||
||TOP ||on/off-line ocean tracer and biochemistry models ||
||TVD ||Total Variation Diminishing ||
||WAD ||Wetting And Drying ||
||WG ||Working Group ||
||WN ||vertical velocity ||
||WP ||Work Plan ||
||ZAD ||Z (vertical) ADvection ||
}}}

== OPA directories
||ASM ||Assimilation ||
||BDY ||BoundDarY ||
||C1D ||Configuration 1 Dimension ||
||CRS ||CoaRSening ||
||DIA ||Diagnostics ||
||DOM ||DOMain ||
||DYN ||ocean DYNamics ||
||FLO || ||
||ICB ||ICeBerg ||
||IOM ||!Inputs/Outputs Manager ||
||LBC ||Lateral Boundary Condition ||
||LDF ||Lateral !DiFfusion ||
||OBS ||OBServations ||
||SBC ||Surface Boundary Conditions ||
||SOL || ||
||STO ||STOchastic parametrization ||
||TRA ||TRAcers ||
||TRD ||TRenDs ||
||ZDF ||Z (vertical) !DiFfusion ||

== TOP directories
||C14b || ||
||CFC ||!ChloroFluoroCarbons ||
||MY_TRC || ||
||TRP || ||

== PISCES directories
||P2Z || ||
||P4Z || ||
||SED || ||

{{{#!Fold title='CPP keys list' tag=h2
(from `full_key_list.txt` in [source:/branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/COMPILE COMPILE directory])
||key_agrif ||
||key_asminc ||
||key_bdy ||
||key_c14b ||
||key_c1d ||
||key_cfc ||
||key_cice ||
||key_cice4 ||
||key_cpl_carbon_cycle ||
||key_cyclone ||
||key_degrad ||
||key_diaar5 ||
||key_diadct ||
||key_diaeiv ||
||key_diaharm ||
||key_diahth ||
||key_diainstant ||
||key_diaobs ||
||key_dimgout ||
||key_dynldf_c1d ||
||key_dynldf_c2d ||
||key_dynldf_c3d ||
||key_dynldf_smag ||
||key_dynspg_exp ||
||key_dynspg_flt ||
||key_dynspg_ts ||
||key_esopa ||
||key_floats ||
||key_iomput ||
||key_kppcustom ||
||key_kpplktb ||
||key_kriest ||
||key_ldfslp ||
||key_lim2 ||
||key_lim2_vp ||
||key_lim3 ||
||key_mpp_mpi ||
||key_mpp_rep ||
||key_my_trc ||
||key_nemocice_decomp ||
||key_netcdf4 ||
||key_nosignedzero ||
||key_noslip_accurate ||
||key_oa3mct_v3 ||
||key_oasis3 ||
||key_offline ||
||key_offobsoper ||
||key_pisces ||
||key_pisces_reduced ||
||key_sed ||
||key_sed_off ||
||key_tide ||
||key_top ||
||key_trabbl ||
||key_traldf_ano ||
||key_traldf_c1d ||
||key_traldf_c2d ||
||key_traldf_c3d ||
||key_traldf_eiv ||
||key_traldf_smag ||
||key_trdmxl_trc ||
||key_trdtrc ||
||key_vectopt_loop ||
||key_vvl ||
||key_xios2 ||
||key_zdfcst ||
||key_zdfddm ||
||key_zdfgls ||
||key_zdfkpp ||
||key_zdfric ||
||key_zdftke ||
||key_zdftmx ||
||key_zdftmx_new ||
}}}

{{{#!Fold title='Reference Confiurations parameter names' tag=h2

{{{#!Fold title='AMM' tag=h3
||nav_lon ||
||nav_lat ||
||nav_lev ||
||time_counter ||
||rnf_b ||
||rnf_hc_b ||
||rnf_sc_b ||
||utau_b ||
||vtau_b ||
||qns_b ||
||emp_b ||
||sfx_b ||
||en ||
||avt ||
||avm ||
||avmu ||
||avmv ||
||mxln ||
||ub2_b ||
||vb2_b ||
||sbc_hc_b ||
||sbc_sc_b ||
||fse3t_b ||
||fse3t_n ||
||ub ||
||vb ||
||tb ||
||sb ||
||rotb ||
||hdivb ||
||sshb ||
||un ||
||vn ||
||tn ||
||sn ||
||rotn ||
||hdivn ||
||sshn ||
||rhop ||
}}}

{{{#!Fold title='ORCA2_LIM_PISCES' tag=h3

==== OPA
||nav_lon ||
||nav_lat ||
||nav_lev ||
||time_counter ||
||ssu_m ||
||ssv_m ||
||sst_m ||
||sss_m ||
||ssh_m ||
||frq_m ||
||rnf_b ||
||rnf_hc_b ||
||rnf_sc_b ||
||utau_b ||
||vtau_b ||
||qns_b ||
||emp_b ||
||sfx_b ||
||en ||
||avt ||
||avm ||
||avmu ||
||avmv ||
||dissl ||
||sbc_hc_b ||
||sbc_sc_b ||
||qsr_hc_b ||
||fraqsr_1lev ||
||gcx ||
||gcxb ||
||ub ||
||vb ||
||tb ||
||sb ||
||rotb ||
||hdivb ||
||sshb ||
||un ||
||vn ||
||tn ||
||sn ||
||rotn ||
||hdivn ||
||sshn ||
||rhop ||

==== LIM
||hicif ||
||hsnif ||
||frld ||
||sist ||
||tbif1 ||
||tbif2 ||
||tbif3 ||
||u_ice ||
||v_ice ||
||qstoif ||
||fsbbq ||
||stress1_i ||
||stress2_i ||
||stress12_i ||
||sxice ||
||syice ||
||sxxice ||
||syyice ||
||sxyice ||
||sxsn ||
||sysn ||
||sxxsn ||
||syysn ||
||sxysn ||
||sxa ||
||sya ||
||sxxa ||
||syya ||
||sxya ||
||sxc0 ||
||syc0 ||
||sxxc0 ||
||syyc0 ||
||sxyc0 ||
||sxc1 ||
||syc1 ||
||sxxc1 ||
||syyc1 ||
||sxyc1 ||
||sxc2 ||
||syc2 ||
||sxxc2 ||
||syyc2 ||
||sxyc2 ||
||sxst ||
||syst ||
||sxxst ||
||syyst ||
||sxyst ||

==== TRC
||PH ||
||Silicalim ||
||Silicamax ||
||sbc_DIC_b ||
||sbc_Alkalini_b ||
||sbc_O2_b ||
||sbc_CaCO3_b ||
||sbc_PO4_b ||
||sbc_POC_b ||
||sbc_Si_b ||
||sbc_PHY_b ||
||sbc_ZOO_b ||
||sbc_DOC_b ||
||sbc_PHY2_b ||
||sbc_ZOO2_b ||
||sbc_DSi_b ||
||sbc_Fer_b ||
||sbc_BFe_b ||
||sbc_GOC_b ||
||sbc_SFe_b ||
||sbc_DFe_b ||
||sbc_GSi_b ||
||sbc_NFe_b ||
||sbc_NCHL_b ||
||sbc_DCHL_b ||
||sbc_NO3_b ||
||sbc_NH4_b ||
||TRNDIC ||
||TRNAlkalini ||
||TRNO2 ||
||TRNCaCO3 ||
||TRNPO4 ||
||TRNPOC ||
||TRNSi ||
||TRNPHY ||
||TRNZOO ||
||TRNDOC ||
||TRNPHY2 ||
||TRNZOO2 ||
||TRNDSi ||
||TRNFer ||
||TRNBFe ||
||TRNGOC ||
||TRNSFe ||
||TRNDFe ||
||TRNGSi ||
||TRNNFe ||
||TRNNCHL ||
||TRNDCHL ||
||TRNNO3 ||
||TRNNH4 ||
||TRBDIC ||
||TRBAlkalini ||
||TRBO2 ||
||TRBCaCO3 ||
||TRBPO4 ||
||TRBPOC ||
||TRBSi ||
||TRBPHY ||
||TRBZOO ||
||TRBDOC ||
||TRBPHY2 ||
||TRBZOO2 ||
||TRBDSi ||
||TRBFer ||
||TRBBFe ||
||TRBGOC ||
||TRBSFe ||
||TRBDFe ||
||TRBGSi ||
||TRBNFe ||
||TRBNCHL ||
||TRBDCHL ||
||TRBNO3 ||
||TRBNH4 ||
}}}

}}}