= Glossary
The following definitions will be automatically converted into HTML <acronym> elements each time the related words will be find in the web page. It means that they will be appeared as HTML tooltips when a user move his mouse over and the word will be clickable if a URL given.

== General acronyms/words with URL (in progress)
|| '''!Acronym/Word''' || '''Description''' || '''URL''' ||
|| Ada || Sandy Bridge IBM supercomputer of IDRIS (FR), 233 TFLOPS peak || http://www.idris.fr/eng/ada/hw-ada-eng.html ||
|| AGRIF || Adaptive Grid Refinement In Fortran || http://www-ljk.imag.fr/MOISE/AGRIF ||
|| BFM || Biogeochemical Flux Model || http://bfm-community.eu ||
|| CDO || Climate Data Operators, collection of command line operators to manipulate and analyse Climate and NWP model Data || http://www.mpimet.mpg.de/fileadmin/software/cdo ||
|| CEA || "Commissariat à l'Énergie Nucléaire et aux Énergies Alternatives", French public government-funded research organisation || http://www.cea.fr/english ||
|| CeCILL || "CEA CNRS INRIA Logiciel Libre", free software license compatible with GNU GPL and compliant with French law || http://www.cecill.info ||
|| CICE || Los Alamos sea ice model || http://oceans11.lanl.gov/trac/CICE ||
|| CMCC || "Centro Euro-Mediterraneo sui Cambiamenti Climatici" (IT) || http://www.cmcc.it ||
|| CMIP || Coupled Model Intercomparison Project || http://cmip-pcmdi.llnl.gov ||
|| CNRS || "Centre National pour la Recherche Scientifique", French largest governmental research organisation || http://www.cnrs.fr/index.php ||
|| Curie || Sandy Bridge Bull supercomputer of CEA, 1,5 PFLOPS peak || http://www-hpc.cea.fr/en/complexe/tgcc-curie.htm ||
|| IDRIS || "Institut du Développement et des Ressources en Informatique Scientifique" or Institute for Development and Resources in Intensive Scientific computing (FR) || http://www.idris.fr/eng ||
|| INGV || "Istituto Nazionale di Geofisica e Vulcanologia" (IT) || http://www.ingv.it/en ||
|| INSU || "Institut National des Sciences de l'Univers" (FR), CNRS's institute for engineering and systems sciences || http://www.insu.cnrs.fr ||
|| IPSL || "Institut Pierre Simon Laplace", french federation of 9 public research laboratories involved in research on terrestrial and planetary environments || http://www.ipsl.fr/en ||
|| LGGE || "Laboratoire de Glaciologie et Géophysique de l'Environnement" (FR) || http://lgge.osug.fr/rubrique1.html?lang=en ||
|| Mercator_Ocean || "Mercator Océan" - Ocean Forecasters (FR) || http://www.mercator-ocean.fr/en ||
|| Met_Office || National weather service, formerly Meteorological Office (UK) || http://www.metoffice.gov.uk ||
|| NEMO || Nucleus for European Modelling of the Ocean || ||
|| NERC || Natural Environment Research Council (UK) || http://www.nerc.ac.uk ||
|| NOC || National Oceanography Centre (UK) || http://noc.ac.uk ||
|| OASIS || Ocean Atmosphere Sea Ice Soil, coupling software to synchronize exchanges of information between numerical codes representing different components of the climate system || http://verc.enes.org/oasis ||
|| PISCES || Pelagic Interaction Scheme for Carbon and Ecosystem Studies || http://www.lodyc.jussieu.fr/~aumont/OPA_model.html ||
|| RENATER || "REseau NAtional de télécommunications pour la Technologie, l'Enseignement et la Recherche", french national telecommunications network for research and education || http://www.renater.fr/?lang=en ||
|| SVN || SubVersioN revision control system || http://subversion.apache.org ||
|| TGCC || "Très Grand Centre de Calcul", HPC center of CEA (FR) || http://www-hpc.cea.fr/en/complexe/tgcc.htm ||
|| Trac || wiki and issue tracking system for software development projects || http://trac.edgewall.org ||
|| UNIBO || "Università di Bologna" or University of Bologna (IT) || http://www.unibo.it/en ||
|| XIOS || Xml Inputs Outputs Server || http://forge.ipsl.jussieu.fr/ioserver ||

{{{#!Fold title='Technical acronyms (in progress)' tag=h2

||'''Acronym''' ||'''Description''' ||
|| AMM12 || Atlantic Margin Model with 12kms horizontal resolution ||
|| BBL || Bottom Boundary Layer ||
|| BGC || !BioGeoChemical ||
|| BFR || Bottom FRiction ||
|| CLIO || Coupled Large-scale Ice Ocean ||
|| CORE || Coordinated Ocean-ice Reference Experiments ||
|| CPP || C !PreProcessor ||
|| DMP || Damping ||
|| DOC || DOCumentation ||
|| DTA || DaTA ||
|| EEN || Energy & ENstrophy ||
|| ENV || ENVironment ||
|| EOS || Equation Of State ||
|| FCM || Flexible Configuration Manager ||
|| FCT || Flux Corrected Transport ||
|| GLS || Generic Length Scale ||
|| HDF || Horizontal !DiFfusion ||
|| HPC || High Performance Computing ||
|| HPG || Horizontal Pressure Gradient ||
|| IAU || Incremental Analysis Updating ||
|| IO || !Inputs/Outputs ||
|| IOF || Interpolation On the Fly ||
|| ISF || Ice ShelF ||
|| KPP || K-Profile Parameterization ||
|| LIM || Louvain-la-neuve sea Ice Model ||
|| LOBSTER || Lodyc Ocean Biogeochemical System for Ecosystem and Resources ||
|| MP || Merge Party ||
|| MPI || Message Passing Interface ||
|| MPP || Massive Parallel Processing ||
|| MSF || Meridional Stream Function ||
|| NEMOVAR || NEMO VARiational data assimilation ||
|| OBC || Open Boundary Conditions ||
|| OFF || OFFline ||
|| ORCA || tripolar grid, with special north fold boundary condition ||
|| OPA || "Océan PArallélisé" ocean general circulation model ||
|| QSR || Q? Solar Radiation ||
|| SAS || Stand-Alone Surface ||
|| SPG || Surface Pressure Gradient ||
|| SSH || Sea Surface Height ||
|| SSS || Sea Surface Salinity ||
|| SST || Sea Surface Temperature ||
|| ST || System Team ||
|| TAM || Tangent and Adjoint Model ||
|| TKE || Turbulent Kinetic Energy ||
|| TOP || on/off-line ocean tracer and biochemistry models ||
|| TVD || Total Variation Diminishing ||
|| WAD || Wetting And Drying ||
|| WG || Working Group ||
|| WN || vertical velocity ||
|| WP || Work Plan ||
|| ZAD || Z (vertical) ADvection ||

== OPA directories
|| ASM || Assimilation ||
|| BDY || BoundDarY ||
|| C1D || Configuration 1 Dimension ||
|| CRS || CoaRSening ||
|| DIA || Diagnostics ||
|| DOM || DOMain ||
|| DYN || ocean DYNamics ||
|| FLO || ? ||
|| ICB || ICeBerg ||
|| IOM || !Inputs/Outputs Manager ||
|| LBC || Lateral Boundary Condition ||
|| LDF || Lateral !DiFfusion ||
|| OBS || OBServations ||
|| SBC || Surface Boundary Conditions ||
|| SOL || ? ||
|| STO || STOchastic parametrization ||
|| TRA || TRAcers ||
|| TRD || TRenDs ||
|| ZDF || Z (vertical) !DiFfusion ||

== TOP directories
|| C14b || ? ||
|| CFC || !ChloroFluoroCarbons ||
|| MY_TRC || ? ||
|| TRP || ? ||

== PISCES directories
||P2Z || ? ||
||P4Z || ? ||
||SED || ? ||

}}}

{{{#!Fold title='CPP keys list (in progress)' tag=h2

From `full_key_list.txt` in [source:/branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/COMPILE COMPILE directory]

|| '''CPP key''' || '''Description''' ||
|| key_agrif || ? ||
|| key_asminc || ? ||
|| key_bdy || ? ||
|| key_c14b || ? ||
|| key_c1d || ? ||
|| key_cfc || ? ||
|| key_cice || ? ||
|| key_cice4 || ? ||
|| key_cpl_carbon_cycle || ? ||
|| key_cyclone || ? ||
|| key_degrad || ? ||
|| key_diaar5 || ? ||
|| key_diadct || ? ||
|| key_diaeiv || ? ||
|| key_diaharm || ? ||
|| key_diahth || ? ||
|| key_diainstant || ? ||
|| key_diaobs || ? ||
|| key_dimgout || ? ||
|| key_dynldf_c1d || ? ||
|| key_dynldf_c2d || ? ||
|| key_dynldf_c3d || ? ||
|| key_dynldf_smag || ? ||
|| key_dynspg_exp || ? ||
|| key_dynspg_flt || ? ||
|| key_dynspg_ts || ? ||
|| key_esopa || ? ||
|| key_floats || ? ||
|| key_iomput || ? ||
|| key_kppcustom || ? ||
|| key_kpplktb || ? ||
|| key_kriest || ? ||
|| key_ldfslp || ? ||
|| key_lim2 || ? ||
|| key_lim2_vp || ? ||
|| key_lim3 || ? ||
|| key_mpp_mpi || ? ||
|| key_mpp_rep || ? ||
|| key_my_trc || ? ||
|| key_nemocice_decomp || ? ||
|| key_netcdf4 || ? ||
|| key_nosignedzero || ? ||
|| key_noslip_accurate || ? ||
|| key_oa3mct_v3 || ? ||
|| key_oasis3 || ? ||
|| key_offline || ? ||
|| key_offobsoper || ? ||
|| key_pisces || ? ||
|| key_pisces_reduced || ? ||
|| key_sed || ? ||
|| key_sed_off || ? ||
|| key_tide || ? ||
|| key_top || ? ||
|| key_trabbl || ? ||
|| key_traldf_ano || ? ||
|| key_traldf_c1d || ? ||
|| key_traldf_c2d || ? ||
|| key_traldf_c3d || ? ||
|| key_traldf_eiv || ? ||
|| key_traldf_smag || ? ||
|| key_trdmxl_trc || ? ||
|| key_trdtrc || ? ||
|| key_vectopt_loop || ? ||
|| key_vvl || ? ||
|| key_xios2 || ? ||
|| key_zdfcst || ? ||
|| key_zdfddm || ? ||
|| key_zdfgls || ? ||
|| key_zdfkpp || ? ||
|| key_zdfric || ? ||
|| key_zdftke || ? ||
|| key_zdftmx || ? ||
|| key_zdftmx_new || ? ||

}}}

{{{#!Fold title='Reference Configurations parameter names (in progress)' tag=h2

{{{#!Fold title='AMM' tag=h3

|| '''Parameter''' || '''Description''' ||
|| nav_lon || ? ||
|| nav_lat || ? ||
|| nav_lev || ? ||
|| time_counter || ? ||
|| rnf_b || ? ||
|| rnf_hc_b || ? ||
|| rnf_sc_b || ? ||
|| utau_b || ? ||
|| vtau_b || ? ||
|| qns_b || ? ||
|| emp_b || ? ||
|| sfx_b || ? ||
|| en || ? ||
|| avt || ? ||
|| avm || ? ||
|| avmu || ? ||
|| avmv || ? ||
|| mxln || ? ||
|| ub2_b || ? ||
|| vb2_b || ? ||
|| sbc_hc_b || ? ||
|| sbc_sc_b || ? ||
|| fse3t_b || ? ||
|| fse3t_n || ? ||
|| ub || ? ||
|| vb || ? ||
|| tb || ? ||
|| sb || ? ||
|| rotb || ? ||
|| hdivb || ? ||
|| sshb || ? ||
|| un || ? ||
|| vn || ? ||
|| tn || ? ||
|| sn || ? ||
|| rotn || ? ||
|| hdivn || ? ||
|| sshn || ? ||
|| rhop || ? ||

}}}

{{{#!Fold title='ORCA2_LIM_PISCES' tag=h3

==== OPA
|| '''Parameter''' || '''Description''' ||
|| nav_lon || ? ||
|| nav_lat || ? ||
|| nav_lev || ? ||
|| time_counter || ? ||
|| ssu_m || ? ||
|| ssv_m || ? ||
|| sst_m || ? ||
|| sss_m || ? ||
|| ssh_m || ? ||
|| frq_m || ? ||
|| rnf_b || ? ||
|| rnf_hc_b || ? ||
|| rnf_sc_b || ? ||
|| utau_b || ? ||
|| vtau_b || ? ||
|| qns_b || ? ||
|| emp_b || ? ||
|| sfx_b || ? ||
|| en || ? ||
|| avt || ? ||
|| avm || ? ||
|| avmu || ? ||
|| avmv || ? ||
|| dissl || ? ||
|| sbc_hc_b || ? ||
|| sbc_sc_b || ? ||
|| qsr_hc_b || ? ||
|| fraqsr_1lev || ? ||
|| gcx || ? ||
|| gcxb || ? ||
|| ub || ? ||
|| vb || ? ||
|| tb || ? ||
|| sb || ? ||
|| rotb || ? ||
|| hdivb || ? ||
|| sshb || ? ||
|| un || ? ||
|| vn || ? ||
|| tn || ? ||
|| sn || ? ||
|| rotn || ? ||
|| hdivn || ? ||
|| sshn || ? ||
|| rhop || ? ||

==== LIM
|| hicif || ? ||
|| hsnif || ? ||
|| frld || ? ||
|| sist || ? ||
|| tbif1 || ? ||
|| tbif2 || ? ||
|| tbif3 || ? ||
|| u_ice || ? ||
|| v_ice || ? ||
|| qstoif || ? ||
|| fsbbq || ? ||
|| stress1_i || ? ||
|| stress2_i || ? ||
|| stress12_i || ? ||
|| sxice || ? ||
|| syice || ? ||
|| sxxice || ? ||
|| syyice || ? ||
|| sxyice || ? ||
|| sxsn || ? ||
|| sysn || ? ||
|| sxxsn || ? ||
|| syysn || ? ||
|| sxysn || ? ||
|| sxa || ? ||
|| sya || ? ||
|| sxxa || ? ||
|| syya || ? ||
|| sxya || ? ||
|| sxc0 || ? ||
|| syc0 || ? ||
|| sxxc0 || ? ||
|| syyc0 || ? ||
|| sxyc0 || ? ||
|| sxc1 || ? ||
|| syc1 || ? ||
|| sxxc1 || ? ||
|| syyc1 || ? ||
|| sxyc1 || ? ||
|| sxc2 || ? ||
|| syc2 || ? ||
|| sxxc2 || ? ||
|| syyc2 || ? ||
|| sxyc2 || ? ||
|| sxst || ? ||
|| syst || ? ||
|| sxxst || ? ||
|| syyst || ? ||
|| sxyst || ? ||

==== TRC
|| PH || ? ||
|| Silicalim || ? ||
|| Silicamax || ? ||
|| sbc_DIC_b || ? ||
|| sbc_Alkalini_b || ? ||
|| sbc_O2_b || ? ||
|| sbc_CaCO3_b || ? ||
|| sbc_PO4_b || ? ||
|| sbc_POC_b || ? ||
|| sbc_Si_b || ? ||
|| sbc_PHY_b || ? ||
|| sbc_ZOO_b || ? ||
|| sbc_DOC_b || ? ||
|| sbc_PHY2_b || ? ||
|| sbc_ZOO2_b || ? ||
|| sbc_DSi_b || ? ||
|| sbc_Fer_b || ? ||
|| sbc_BFe_b || ? ||
|| sbc_GOC_b || ? ||
|| sbc_SFe_b || ? ||
|| sbc_DFe_b || ? ||
|| sbc_GSi_b || ? ||
|| sbc_NFe_b || ? ||
|| sbc_NCHL_b || ? ||
|| sbc_DCHL_b || ? ||
|| sbc_NO3_b || ? ||
|| sbc_NH4_b || ? ||
|| TRNDIC || ? ||
|| TRNAlkalini || ? ||
|| TRNO2 || ? ||
|| TRNCaCO3 || ? ||
|| TRNPO4 || ? ||
|| TRNPOC || ? ||
|| TRNSi || ? ||
|| TRNPHY || ? ||
|| TRNZOO || ? ||
|| TRNDOC || ? ||
|| TRNPHY2 || ? ||
|| TRNZOO2 || ? ||
|| TRNDSi || ? ||
|| TRNFer || ? ||
|| TRNBFe || ? ||
|| TRNGOC || ? ||
|| TRNSFe || ? ||
|| TRNDFe || ? ||
|| TRNGSi || ? ||
|| TRNNFe || ? ||
|| TRNNCHL || ? ||
|| TRNDCHL || ? ||
|| TRNNO3 || ? ||
|| TRNNH4 || ? ||
|| TRBDIC || ? ||
|| TRBAlkalini || ? ||
|| TRBO2 || ? ||
|| TRBCaCO3 || ? ||
|| TRBPO4 || ? ||
|| TRBPOC || ? ||
|| TRBSi || ? ||
|| TRBPHY || ? ||
|| TRBZOO || ? ||
|| TRBDOC || ? ||
|| TRBPHY2 || ? ||
|| TRBZOO2 || ? ||
|| TRBDSi || ? ||
|| TRBFer || ? ||
|| TRBBFe || ? ||
|| TRBGOC || ? ||
|| TRBSFe || ? ||
|| TRBDFe || ? ||
|| TRBGSi || ? ||
|| TRBNFe || ? ||
|| TRBNCHL || ? ||
|| TRBDCHL || ? ||
|| TRBNO3 || ? ||
|| TRBNH4 || ? ||

}}}

}}}