# # ChangeLog for branches # # Generated by Trac 1.0.1 # 2024-06-08T17:09:11+02:00 Thu, 02 May 2019 16:06:07 GMT josefine.ghattas [5948] Removed local variable frac_snow_veg_loc not needed. See ticket #287 Thu, 02 May 2019 15:22:22 GMT josefine.ghattas [5947] Remved declaration of 'sinang' for IOIPSL output. The corresponding ... Thu, 02 May 2019 14:04:13 GMT josefine.ghattas [5946] Small update in comments Thu, 02 May 2019 13:01:24 GMT josefine.ghattas [5945] Ticket #508: height and lai are output from slowproc_initialize and ... Thu, 02 May 2019 12:13:03 GMT daniel.goll [5944] bugfix: manure P was not correctly diagnosed from manure N. This fix ... Thu, 02 May 2019 09:45:21 GMT guillaume.marie [5943] R script dev + bug fix to run CRUNCEP version Mon, 29 Apr 2019 13:45:43 GMT josefine.ghattas [5941] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/slowproc.f90 (modified) Correction in initialization for case ok_stomate=false, needed for ... Thu, 25 Apr 2019 14:44:24 GMT matthew.mcgrath [5940] DEV: Preventing sapwood from dying in grass senescence Thu, 25 Apr 2019 11:31:49 GMT albert.jornet [5936] Tag: version 8.9.0 Tue, 23 Apr 2019 14:05:40 GMT pascal.maugis [5933] slight upgrades Fri, 19 Apr 2019 07:32:03 GMT matthew.mcgrath [5932] DEV: Uninitialized variable Thu, 18 Apr 2019 15:40:02 GMT josefine.ghattas [5931] Changed back so get_printlev use getin_p. Change in sapiens_agriculture ... Thu, 18 Apr 2019 15:07:44 GMT matthew.mcgrath [5930] DEV: Getting grasses to grow Thu, 18 Apr 2019 14:45:33 GMT josefine.ghattas [5929] Corrected type misstake introduced in previous commit [5928] Thu, 18 Apr 2019 14:07:27 GMT josefine.ghattas [5928] Removed circ_class_biomass and circ_class_n from albedo. It was never ... Thu, 18 Apr 2019 10:04:29 GMT josefine.ghattas [5926] Correct error in initialization of fm_change_force, ticket #525 Thu, 18 Apr 2019 06:03:51 GMT bertrand.guenet [5925] * branches/publications/ORCHIDEE-LEAK-r5919 (copied) Wed, 17 Apr 2019 16:33:50 GMT josefine.ghattas [5923] Switch order of arguments for variables laieff_isotrop and ... Wed, 17 Apr 2019 15:11:44 GMT josefine.ghattas [5921] Change name for subroutine albedo_two_stream into albedo_main. See ... Wed, 17 Apr 2019 15:05:03 GMT josefine.ghattas [5920] Change name for variable npts into kjpindex to be coherent with ... Wed, 17 Apr 2019 14:44:35 GMT josefine.ghattas [5918] Reorganization: moved albedo related code from condveg to albedo module. ... Wed, 17 Apr 2019 13:42:45 GMT josefine.ghattas [5915] See ticket #507 Initialize printlev_loc in module stomate_laieff: This ... Wed, 17 Apr 2019 13:39:46 GMT josefine.ghattas [5914] Initialize printlev_loc properly Wed, 17 Apr 2019 13:36:52 GMT josefine.ghattas [5913] Activated diagnostic interp_diag_vegetrefrac and added axis nvmap. See ... Wed, 17 Apr 2019 12:30:10 GMT josefine.ghattas [5912] Remove redundant get_printlev and other corrections on printlev_loc. ... Wed, 17 Apr 2019 12:24:20 GMT josefine.ghattas [5911] Use getin instead of getin_p to allow the case when the function ... Tue, 16 Apr 2019 15:17:51 GMT sebastiaan.luyssaert [5910] DEV: addresses ticket #502 concerning the analytical spin-up Tue, 16 Apr 2019 15:10:42 GMT sebastiaan.luyssaert [5909] DEV: reactivated printlev_loc Tue, 16 Apr 2019 14:33:38 GMT pascal.maugis [5908] generalization of variable follow-up and various upgrades Tue, 16 Apr 2019 12:01:52 GMT albert.jornet [5907] Merge: from revision [5771/perso/albert.jornet/ORCHIDEE- ... Tue, 16 Apr 2019 11:32:17 GMT guillaume.marie [5906] Bugfix Tue, 16 Apr 2019 09:45:04 GMT guillaume.marie [5905] bug fix in model_settings.py Tue, 16 Apr 2019 09:37:30 GMT anne-sofie.lanso [5904] Update PSI_LEAF for Fagus Sylvatica and Quercus Robur Petraea to induce ... Tue, 16 Apr 2019 09:29:28 GMT guillaume.marie [5903] Update SENESCENCE_TEMP_C and GDDNCD_OFFSET to better match phenelogy for ... Mon, 15 Apr 2019 19:52:30 GMT sebastiaan.luyssaert [5902] DEV: tested for a single pixel with PFT map for 10 years. See ticket ... Mon, 15 Apr 2019 12:58:32 GMT josefine.ghattas [5901] albedo_snow and albedo_glob are now local variables instead of module ... Mon, 15 Apr 2019 12:48:05 GMT josefine.ghattas [5900] Changed name for local variable veget_cov_max into veget_max to ... Mon, 15 Apr 2019 12:33:19 GMT josefine.ghattas [5899] Change variable name nlevels_photo into nlai, ticket #509 Mon, 15 Apr 2019 12:28:15 GMT josefine.ghattas [5898] Set back to run XIOS in attached mode when having only 1MPI for ... Mon, 15 Apr 2019 10:59:31 GMT josefine.ghattas [5897] Change variable name in restart file to be consistent with variable name ... Mon, 15 Apr 2019 10:52:08 GMT josefine.ghattas [5896] Change name of variables containing humrel into moiavail. Remove ... Mon, 15 Apr 2019 10:21:10 GMT guillaume.marie [5895] Mistake correction: I reactivated xios in OOL_SEC_STO_FG2 Mon, 15 Apr 2019 08:26:05 GMT josefine.ghattas [5894] Corrected to loop over nlevel_tot because the loop needs to account for ... Fri, 12 Apr 2019 13:07:21 GMT albert.jornet [5893] Fix: initialize pcappa_supp to zero to prevent any error Fri, 12 Apr 2019 11:24:52 GMT albert.jornet [5892] Fix: veget_max_bg is now initialized in sechiba Change: use ... Fri, 12 Apr 2019 09:40:49 GMT josefine.ghattas [5891] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_orchidee.xml (modified) As done in the trunk rev [5889]: Small change on the interpolated output ... Fri, 12 Apr 2019 09:40:14 GMT albert.jornet [5890] Merge: from [5888/perso/albert.jornet/MICT_PFUNIT] Thu, 11 Apr 2019 13:07:23 GMT matthew.mcgrath [5885] DEV: Update the script to check which Python version is running. Script ... Thu, 11 Apr 2019 12:40:35 GMT guillaume.marie [5884] bug fix. script improvement Wed, 10 Apr 2019 12:19:21 GMT guillaume.marie [5883] bug fix Wed, 10 Apr 2019 10:23:11 GMT guillaume.marie [5882] add a new feature in the ensemble run to handle the comparaison between ... Wed, 10 Apr 2019 10:22:30 GMT guillaume.marie [5881] add a new feature in the ensemble run to handle the comparaison between ... Tue, 09 Apr 2019 14:47:09 GMT albert.jornet [5880] Correction: related to commit [5879]: - no STRICT_CHECK is ... Tue, 09 Apr 2019 14:28:34 GMT albert.jornet [5879] Fix: prevent with an error message the use of a full gridcell with full ... Mon, 08 Apr 2019 17:34:36 GMT josefine.ghattas [5877] Cut lines too long to compile with gfortran Mon, 08 Apr 2019 16:37:38 GMT josefine.ghattas [5876] Ticket #498 - Removed vir_humrel_growingseason - Changed name of ... Mon, 08 Apr 2019 16:07:33 GMT josefine.ghattas [5875] Removed variables never used and corrrected small error in comment. Mon, 08 Apr 2019 15:41:39 GMT josefine.ghattas [5874] Revert commit [5777] containg work around not needed anymore. See ticket ... Mon, 08 Apr 2019 15:24:47 GMT josefine.ghattas [5873] Updated with changes done in the trunk between revision 5858:5867 Mon, 08 Apr 2019 15:03:42 GMT guillaume.marie [5872] simplify the use of the Rscript for ENSEMBLE evaluation and add a new ... Mon, 08 Apr 2019 13:21:40 GMT josefine.ghattas [5871] Updated with changes done in the trunk between revision 5792:5858 . ... Mon, 08 Apr 2019 13:20:17 GMT josefine.ghattas [5870] Updated with changes done in the trunk between revision 5792:5858 . In ... Mon, 08 Apr 2019 13:13:30 GMT guillaume.marie [5869] update R script for evaluation : add figure for phenological state ... Fri, 05 Apr 2019 11:56:29 GMT anne-sofie.lanso [5865] K_LATOSA_MIN and K_LATOSA_MAX were updated to obtian acceptable LAI ... Wed, 03 Apr 2019 13:29:57 GMT jina.jeong [5863] Self-thinning parameters from European NFI data were updated. Tue, 02 Apr 2019 15:02:15 GMT guillaume.marie [5860] update make_eval_figure.R to integrate all EU sites Tue, 02 Apr 2019 13:15:48 GMT guillaume.marie [5859] add a fluxnet.card with all the European fluxnet sites Mon, 01 Apr 2019 13:06:22 GMT guillaume.marie [5857] improvement of the cdo and R scripts Mon, 01 Apr 2019 10:19:19 GMT guillaume.marie [5856] add 4 four fluxnet.card files. full_eval every pft/sp are represented in ... Thu, 28 Mar 2019 10:54:16 GMT josefine.ghattas [5853] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_orchidee.xml (modified) Changed slightly output grid for interpolated output. This is done to ... Thu, 28 Mar 2019 08:47:10 GMT anne.cozic [5852] modify a test on ok_explicitsnow and snowdz to avoid a bug when we run ... Thu, 28 Mar 2019 08:21:37 GMT anne.cozic [5851] correct a bug in compilation introduced with the vegetation patch Wed, 27 Mar 2019 14:37:43 GMT albert.jornet [5850] Fix: replace hardcoded days of the year with the global time variable ... Wed, 27 Mar 2019 14:10:48 GMT albert.jornet [5849] Fix: stomate_Cforcing timestep index ( tiket:550 ): - ... Mon, 25 Mar 2019 14:19:44 GMT matthew.mcgrath [5848] DEV: Bug fix for running in parallel Mon, 25 Mar 2019 12:56:22 GMT josefine.ghattas [5847] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/ioipslctrl.f90 (modified) As done in the trunk rev [5846]: Corrected bug: this bug and alos the ... Mon, 25 Mar 2019 11:19:19 GMT sebastiaan.luyssaert [5845] DEV: acounts for the correction proposed in r5843 for the trunk Mon, 25 Mar 2019 10:12:43 GMT josefine.ghattas [5844] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/ioipslctrl.f90 (modified) Corrected bug as done in the trunk rev [5843]: stomate_rest_out.nc file ... Mon, 25 Mar 2019 08:20:14 GMT albert.jornet [5842] Change: enable TOTAL_M xios variable from the source code Sun, 24 Mar 2019 16:23:37 GMT sebastiaan.luyssaert [5841] DEV: tested on a single pixel for 5 years. This code has two options to ... Fri, 22 Mar 2019 18:59:47 GMT sebastiaan.luyssaert [5840] DEV: tested for 2 years. Results are identical. stomate_resp is now in ... Thu, 21 Mar 2019 15:33:10 GMT guillaume.marie [5839] add R script to produce evaluation figures from ENSEMBLE runs based on ... Thu, 21 Mar 2019 14:08:41 GMT matthew.mcgrath [5838] DEV: Solving conflict if age classes are not specifically mentioned in ... Thu, 21 Mar 2019 13:41:36 GMT guillaume.marie [5837] add AGE_STAND in iopsl history file Thu, 21 Mar 2019 13:04:31 GMT josefine.ghattas [5836] * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_ADA.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_IRENE.fcm (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_IRENE.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_OCCIGEN.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-gfortran.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-ifort_CICLAD.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-ifort_LSCE.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/bld.cfg (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/makeorchidee_fcm (modified) Integrated changeset [5834] (remove -qopenmp-threadprivate compat) and ... Thu, 21 Mar 2019 07:57:56 GMT anne-sofie.lanso [5833] Added a few comments for clarification regarding the output of the ... Wed, 20 Mar 2019 09:53:20 GMT sebastiaan.luyssaert [5832] PROD: run.def for 13 PFTs is working Wed, 20 Mar 2019 09:09:06 GMT sebastiaan.luyssaert [5831] Fixed a couple of typos Wed, 20 Mar 2019 07:57:37 GMT sebastiaan.luyssaert [5830] Corrections for improved backward compatibility Tue, 19 Mar 2019 20:13:13 GMT sebastiaan.luyssaert [5829] Added instructions to the readme.txt file Tue, 19 Mar 2019 19:48:38 GMT sebastiaan.luyssaert [5828] Started archiving the scripts and data tables used to make run.defs. See ... Tue, 19 Mar 2019 17:49:42 GMT albert.jornet [5827] Fix: zz_deep and zz_coef_deep are now protected when OK_PC is disabled ... Tue, 19 Mar 2019 11:14:41 GMT guillaume.marie [5826] bug fix in diffuco.f90 and sechiba_hydrol_arch.f90 Mon, 18 Mar 2019 12:56:18 GMT sebastiaan.luyssaert [5825] DEV: not tested. Minor changes such that the run.def could be cleaned a ... Mon, 18 Mar 2019 12:52:43 GMT guillaume.marie [5824] Bugfix + add WOOD_VOLUME_PIX_CUT in iopsl history outputs Thu, 14 Mar 2019 15:07:13 GMT anne-sofie.lanso [5823] The control settings of the newly added run.defs in OOL_SEC_STO_FG2 have ... Thu, 14 Mar 2019 11:22:32 GMT guillaume.marie [5822] Correction : wrong values for ALPHA_RDI_LOWER in the three run.def Thu, 14 Mar 2019 11:08:35 GMT sebastiaan.luyssaert [5821] DEV: not tested. The changes address ticket #518. A flag was renamed, ... Thu, 14 Mar 2019 09:12:57 GMT josefine.ghattas [5820] * branches/ORCHIDEE_2_2/ORCHIDEE/makeorchidee_fcm (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/sechiba.f90 (modified) - sechiba.f90: Cut line to long for gfortran - makeorchidee_fcm: small ... Thu, 14 Mar 2019 08:16:21 GMT sebastiaan.luyssaert [5819] DEV: not tested. The changes address ticket #524 and fix a bug in ...