# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-06-09T07:01:03+02:00 Mon, 27 Sep 2021 11:20:01 GMT sebastiaan.luyssaert [7300] Improve sequence for pests in stomate. Proposed by Guillaume. Fri, 24 Sep 2021 10:07:27 GMT sebastiaan.luyssaert [7296] Use the v2.2 for CRU-JRA. Changes proposed by Xiaoni Thu, 23 Sep 2021 14:17:55 GMT josefine.ghattas [7295] Removed bad placed comma. Makes only warning by some compiler. Thu, 23 Sep 2021 14:05:00 GMT josefine.ghattas [7294] Removed local declaration of risk_index. This is a module variable and ... Mon, 20 Sep 2021 08:52:33 GMT josefine.ghattas [7293] Corrected small errors seen by the compiler but not making any problems ... Mon, 20 Sep 2021 08:51:40 GMT josefine.ghattas [7292] Corrected error for running with OpenMP (when coupling to LMDZ). ... Fri, 17 Sep 2021 11:21:48 GMT josefine.ghattas [7290] Avoid shap missmatch errors when compiling in debug mode. See ticket ... Fri, 17 Sep 2021 08:44:33 GMT josefine.ghattas [7289] Corrected errors in OMP THREADPRIVATE statements. The code could not ... Mon, 13 Sep 2021 18:39:05 GMT sebastiaan.luyssaert [7281] Contributes to ticket #786. Changes proposed by Xiaoni Thu, 09 Sep 2021 11:14:27 GMT sebastiaan.luyssaert [7279] Contributes to #633 and #651. Code changes by Guillaume Thu, 02 Sep 2021 12:47:59 GMT sebastiaan.luyssaert [7278] Adjusted K_LATOSA to better match ORC2, ORC3 and textbook LAI Thu, 26 Aug 2021 15:17:38 GMT bertrand.guenet [7274] to launch ensemble simulations on week queue on ciclad Tue, 24 Aug 2021 13:24:57 GMT sebastiaan.luyssaert [7273] Contributes to tickets #633 and #653. Adding a period for unmanaged ... Thu, 19 Aug 2021 09:15:18 GMT sebastiaan.luyssaert [7272] corrects typo present in second last commit Thu, 19 Aug 2021 08:49:29 GMT sebastiaan.luyssaert [7271] Adding a flag that enables switching between Pgap and Lambert-Beer to ... Tue, 17 Aug 2021 13:10:24 GMT sebastiaan.luyssaert [7270] Changed K_LATOSA_MAX in line with de code changes in r7269 Tue, 17 Aug 2021 11:15:38 GMT sebastiaan.luyssaert [7269] No longer using the N-bypass through the fungivores. Returned to a fixed ... Thu, 15 Jul 2021 22:08:13 GMT sebastiaan.luyssaert [7250] set veget for bare soil to zero. Following r6994 Tue, 13 Jul 2021 14:21:38 GMT nicolas.vuichard [7249] add Nitrogen fertilizer script Tue, 13 Jul 2021 14:19:27 GMT nicolas.vuichard [7248] create directory for versioning Nitrogen fertilizer script Fri, 09 Jul 2021 14:22:42 GMT matthew.mcgrath [7247] A couple small technical bug fixes Thu, 08 Jul 2021 12:46:03 GMT sebastiaan.luyssaert [7246] Making KF a function of tree height. Changing Ra parameters, re- ... Mon, 05 Jul 2021 10:46:33 GMT matthew.mcgrath [7244] Making explicit the values of Pgap in different arrays Sat, 03 Jul 2021 05:14:47 GMT sebastiaan.luyssaert [7243] Correction of previous commit: making KF a function of height Fri, 02 Jul 2021 21:42:47 GMT sebastiaan.luyssaert [7242] Making KF a function of tree height/ Mainly cleaning the code ... Fri, 02 Jul 2021 09:18:44 GMT sebastiaan.luyssaert [7241] Contribute to ticket #663. Refining the bark beetle dynamics and damage Wed, 16 Jun 2021 07:15:50 GMT sebastiaan.luyssaert [7219] Changes to insect outbreaks proposed by Guillaume. Changes to vcmax ... Wed, 02 Jun 2021 12:21:13 GMT sebastiaan.luyssaert [7209] Enhancing consistency of parameters across PFTs Wed, 02 Jun 2021 11:57:28 GMT sebastiaan.luyssaert [7208] Enhancing the soil carbon pools by applying the same parameter changes ... Fri, 28 May 2021 16:07:08 GMT sebastiaan.luyssaert [7202] introducing different driver for the endimic and pandemic phases of ... Mon, 24 May 2021 16:00:17 GMT sebastiaan.luyssaert [7197] Revisions of the windthrow code. Changes proposed by Jina Jeong. Thu, 20 May 2021 14:52:02 GMT sebastiaan.luyssaert [7194] Fixes ticket 777 Mon, 10 May 2021 15:24:20 GMT sebastiaan.luyssaert [7187] Fixes ticket 776 Thu, 06 May 2021 21:09:10 GMT sebastiaan.luyssaert [7180] Fixes ticket #768 Thu, 06 May 2021 17:37:44 GMT matthew.mcgrath [7179] Small write statement related to bug #776 Thu, 06 May 2021 11:25:27 GMT sebastiaan.luyssaert [7178] Removed duplication of the spinup settings. Kept the settings in ... Mon, 03 May 2021 10:09:57 GMT nicolas.vuichard [7175] add write_stat file to the repositery Thu, 29 Apr 2021 15:17:50 GMT sebastiaan.luyssaert [7173] Added a temporary fix. See ticket #761. Wed, 28 Apr 2021 15:20:32 GMT sebastiaan.luyssaert [7168] fixes ticket #775 Wed, 28 Apr 2021 13:59:06 GMT sebastiaan.luyssaert [7167] Fixes the mass balance problem reported in ticket #773 Wed, 28 Apr 2021 09:51:17 GMT sebastiaan.luyssaert [7164] change GCC for Obelix and add ENSEMBLE to Make_orchidee_pft_defs.py Mon, 26 Apr 2021 08:25:08 GMT sebastiaan.luyssaert [7161] Contributes to ticket #759. Fixes a crash that occurred in debug mode on ... Fri, 23 Apr 2021 15:25:48 GMT matthew.mcgrath [7160] Bug fix found during ticket 773 (see ticket for more details) Thu, 22 Apr 2021 14:59:35 GMT sebastiaan.luyssaert [7159] Update parameter files for FG0 Thu, 22 Apr 2021 11:59:50 GMT sebastiaan.luyssaert [7158] contributes to ticket #730 Tue, 20 Apr 2021 15:05:11 GMT bertrand.guenet [7157] last update to run with the ENSEMBLE configuration Fri, 09 Apr 2021 11:42:32 GMT bertrand.guenet [7155] update to run this configuration more easily with the trunk Fri, 09 Apr 2021 11:10:51 GMT bertrand.guenet [7154] update spinup configuration to run the ENSEMBLE config Fri, 09 Apr 2021 11:05:45 GMT bertrand.guenet [7153] update spinup configuration to run the ENSEMBLE config Fri, 09 Apr 2021 08:24:57 GMT sebastiaan.luyssaert [7150] bug fix in the calculation of the height of grasses and crops used in ... Wed, 07 Apr 2021 18:52:57 GMT sebastiaan.luyssaert [7149] Consistent root profiles throughout the code. Contributes to ticket #715 Wed, 07 Apr 2021 08:45:11 GMT sebastiaan.luyssaert [7148] Fixes ticket 770 Wed, 07 Apr 2021 08:27:35 GMT sebastiaan.luyssaert [7147] Changes contribute to ticket 633. Changes proposed by Jina Jeong. Tue, 06 Apr 2021 17:39:35 GMT sebastiaan.luyssaert [7146] Added script to make clearcut maps for SPINUP_ANALYTIC_FG0 Mon, 05 Apr 2021 15:41:16 GMT sebastiaan.luyssaert [7145] Parameters to work with a reduced sugar loading r7134 and up Fri, 02 Apr 2021 19:22:10 GMT sebastiaan.luyssaert [7144] Created configuration folders for pre-spinup Fri, 02 Apr 2021 19:00:21 GMT sebastiaan.luyssaert [7143] Added clearcutting during spinup to break synchronicity. Contributes to ... Fri, 02 Apr 2021 14:24:02 GMT sebastiaan.luyssaert [7142] Contributes to #651. Change proposed by Jina Jeong. Fri, 02 Apr 2021 12:59:41 GMT sebastiaan.luyssaert [7141] Contributes to #651 and fixes some issues with delta13C. Changes ... Thu, 01 Apr 2021 11:23:00 GMT sebastiaan.luyssaert [7140] Changed the default driver from CRUNCEP to CRUJRAv2.1 Fri, 19 Mar 2021 21:35:03 GMT sebastiaan.luyssaert [7134] Contributed to ticket #798 Fri, 19 Mar 2021 11:47:35 GMT bertrand.guenet [7133] A new output variables added Wed, 17 Mar 2021 19:28:15 GMT sebastiaan.luyssaert [7130] Added a variable to better evaluate the effects of recruitment Fri, 12 Mar 2021 12:51:18 GMT sebastiaan.luyssaert [7125] Parameters changes to make r7124 work. Changes contribute to ticket #698 Fri, 12 Mar 2021 11:06:17 GMT sebastiaan.luyssaert [7124] Bug corrcetion for the calculation of labile_target. Contributes to #698 Fri, 12 Mar 2021 08:46:13 GMT fabienne.maignan [7121] We compute a N-normalisation factor coherent with a N-level content ... Thu, 11 Mar 2021 18:45:56 GMT sebastiaan.luyssaert [7120] Contrinutes to ticket #765 Thu, 11 Mar 2021 15:42:00 GMT sebastiaan.luyssaert [7119] Configuration files for the new driver. Contributes to ticket #730 Thu, 11 Mar 2021 12:51:49 GMT matthew.mcgrath [7117] Bug fix for background albedo of bare soil when using MODIS map Wed, 10 Mar 2021 07:39:15 GMT fabienne.maignan [7114] We remove the transmitted light factor from the computation of the ... Sat, 06 Mar 2021 17:00:50 GMT sebastiaan.luyssaert [7113] Fixes ticket #763 Fri, 05 Mar 2021 19:15:44 GMT sebastiaan.luyssaert [7112] Mover AddYears.ksh into a subfolder Fri, 05 Mar 2021 19:09:40 GMT sebastiaan.luyssaert [7111] Script to create additional years to make the new driver work Wed, 03 Mar 2021 08:17:46 GMT sebastiaan.luyssaert [7106] Unit corrections for NBP and its cross checks and refinements for ... Mon, 22 Feb 2021 10:47:25 GMT sebastiaan.luyssaert [7103] Changes contributing to ticket #759 Tue, 16 Feb 2021 16:39:53 GMT sebastiaan.luyssaert [7089] bug correction on qsurf introduced in rev [6019]. See ticket #762 Tue, 16 Feb 2021 16:38:24 GMT sebastiaan.luyssaert [7088] Changes contributing gto ticket #728 proposed by Chao Yue Tue, 16 Feb 2021 14:38:37 GMT matthew.mcgrath [7083] Adding an option to use dominant vegetation height in calculating ... Tue, 16 Feb 2021 10:56:39 GMT sebastiaan.luyssaert [7082] Fix to make the analytical spinup work with the new driver Tue, 16 Feb 2021 10:54:14 GMT sebastiaan.luyssaert [7081] Fix to make the analytical spinup work with the new driver Tue, 16 Feb 2021 10:32:36 GMT sebastiaan.luyssaert [7080] Changed self-thinning parameters of PFT8 and 9 to better account for ... Mon, 08 Feb 2021 14:55:38 GMT sebastiaan.luyssaert [7065] Contributes to ticket #730 Fri, 05 Feb 2021 07:42:51 GMT sebastiaan.luyssaert [7058] fixes consistency cross-check for nbp for vertical soil discretization. ... Thu, 04 Feb 2021 19:27:53 GMT sebastiaan.luyssaert [7057] fixes ticket #756 and contributes to ticket #759 Thu, 04 Feb 2021 16:06:48 GMT matthew.mcgrath [7056] Ticket 745: correcting some monitoring files Thu, 04 Feb 2021 15:57:39 GMT matthew.mcgrath [7055] Fixing the soil carbon output variable, and changing the default output ... Tue, 02 Feb 2021 18:51:23 GMT matthew.mcgrath [7041] Improvement in monitoring variables in response to ticket 745 Mon, 01 Feb 2021 08:45:36 GMT sebastiaan.luyssaert [7033] Externalized the ratio of Rm/GP and added bm_alloc for labile and ... Fri, 22 Jan 2021 12:00:26 GMT sebastiaan.luyssaert [7015] revert some changes that should not have been committed Thu, 21 Jan 2021 15:54:48 GMT sebastiaan.luyssaert [7013] VCMAX25 is no longer used in stomate. Its default values are still used ... Thu, 21 Jan 2021 15:40:03 GMT sebastiaan.luyssaert [7012] Use ratio between Rm/GPP to trigger senescence for grasslands Thu, 21 Jan 2021 11:33:39 GMT sebastiaan.luyssaert [7011] Final changes for #744 (stomate.f90 and stomate_io.f90) and some ... Wed, 20 Jan 2021 21:16:41 GMT sebastiaan.luyssaert [7010] contributes to #744 Wed, 20 Jan 2021 16:22:38 GMT sebastiaan.luyssaert [7009] Contributes to #744. Restores the capability to run the nbp cross- ... Wed, 20 Jan 2021 13:07:43 GMT sebastiaan.luyssaert [7006] contributes to ticket #744 Wed, 20 Jan 2021 12:35:53 GMT sebastiaan.luyssaert [7005] Finalize ticket #739, adjust configuration to r7004 Wed, 20 Jan 2021 12:20:22 GMT sebastiaan.luyssaert [7004] Fixes ticket #739 and contributes to #749 Thu, 14 Jan 2021 15:04:54 GMT sebastiaan.luyssaert [6999] Contributing to #744. Made the two consistency checks for nbp more ... Thu, 14 Jan 2021 09:59:37 GMT sebastiaan.luyssaert [6998] Contributes to ticket #744 Wed, 13 Jan 2021 19:46:21 GMT matthew.mcgrath [6997] Printing the effective LAI in the sechiba history files to enable ...