Changes between Version 24 and Version 25 of Documentation/OrchideeParameters
- Timestamp:
- 2017-01-27T14:37:21+01:00 (7 years ago)
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Documentation/OrchideeParameters
v24 v25 4 4 5 5 6 Here is given the list of all the parameters of the trunk rev 3025are their description and default values :6 Here is given the list of all the parameters of the trunk rev 4061 are their description and default values : 7 7 8 8 || Config Key|| Config Def || Config Units || Config Desc || Config Help || Config If || 9 9 || || || || || || || 10 || a1 || undef, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0. 85, 0.85, 0.85|| [-] || Empirical factor involved in the calculation of fvpd || See Table 2 of Yin et al. (2009) || OK_CO2 ||10 || a1 || undef, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.72, 0.85, 0.72 || [-] || Empirical factor involved in the calculation of fvpd || See Table 2 of Yin et al. (2009) || OK_CO2 || 11 11 || ACTIVE_TO_PASS_CLAY_FRAC || 0.68 || [-] || || || OK_STOMATE || 12 12 || AGRICULTURE || y || [FLAG] || agriculture allowed? || With this variable, you can determine whether agriculture is allowed || OK_SECHIBA or OK_STOMATE || 13 13 || ALB_BARE_MODEL || n || [FLAG] || Switch bare soil albedo dependent (if TRUE) on soil wetness || If TRUE, the model for bare soil albedo is the old formulation. Then it depend on the soil dry or wetness. If FALSE, it is the new computation that is taken, it is the mean of soil albedo. || OK_SECHIBA || 14 || ALB_BG_FILE || alb_bg.nc || [FILE] || Name of file from which the background albedo is read || The name of the file to be opened to read background albedo || || 15 || ALB_BG_MODIS || n || [FLAG] || Read bare soil albedo from file with background MODIS data || If TRUE, the bare soil albedo is read from file based on background MODIS data. If FALSE, computaion depends on ALB_BARE_MODEL || OK_SECHIBA || 14 16 || ALB_DEADLEAF || 0.12, 0.35 || [-] || albedo of dead leaves, VIS+NIR || || OK_SECHIBA || 15 17 || ALB_ICE || 0.60, 0.20 || [-] || albedo of ice, VIS+NIR || || OK_SECHIBA || 16 || ALB_LEAF_NIR || .0 0, .20, .22, .22, .22,.22, .22, .22, .22, .30, .30, .30, .30 || [-] || leaf albedo of vegetation type, near infrared albedo |||| OK_SECHIBA ||17 || ALB_LEAF_VIS || .0 0, .04, .06, .06, .06,.06, .06, .06, .06, .10, .10, .10, .10 || [-] || leaf albedo of vegetation type, visible albedo |||| OK_SECHIBA ||18 || ALB_LEAF_NIR || .0, .227, .214, .193, .208, .244, .177, .218, .213, .252, .265, .272, .244 || [-] || leaf albedo of vegetation type, near infrared albedo || optimized on 04/07/2016 || OK_SECHIBA || 19 || ALB_LEAF_VIS || .0, .0397, .0474, .0386, .0484, .0411, .041, .0541, .0435, .0524, .0508, .0509, .0606 || [-] || leaf albedo of vegetation type, visible albedo || optimized on 04/07/2016 || OK_SECHIBA || 18 20 || ALBSOIL_NIR || 0.36, 0.34, 0.34, 0.33, 0.30, 0.25, 0.20, 0.15, 0.45 || [-] || || || OK_SECHIBA || 19 21 || ALBSOIL_VIS || 0.18, 0.16, 0.16, 0.15, 0.12, 0.105, 0.09, 0.075, 0.25 || [-] || || || OK_SECHIBA || … … 21 23 || ALLOC_MIN || undef, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, undef, undef, undef, undef || [-] || minimum allocation above/below || || OK_STOMATE || 22 24 || ALLOC_SAP_ABOVE_GRASS || 1.0 || [-] || fraction of sapwood allocation above ground || || OK_STOMATE || 23 || ALLOW_WEATHERGEN || n || [FLAG] || Allow weather generator to create data || This flag allows the forcing-reader to generate synthetic data if the data in the file is too sparse and the temporal resolution would not be enough to run the model. || ||24 25 || ALMA_OUTPUT || n || [FLAG] || Should the output follow the ALMA convention || If this logical flag is set to true the model will output all its data according to the ALMA convention. It is the recommended way to write data out of ORCHIDEE. || OK_SECHIBA || 25 26 || ALPHA_GRASS || 0.5 || [-] || sapling characteristics : alpha's || || OK_STOMATE || … … 46 47 || bSJ || undef, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, 0., -0.75, 0. || [J K-1 mol-1 °C-1] || b coefficient of the linear regression (a+bT) defining the Entropy term for Jmax || See Table 3 of Kattge & Knorr (2007) - For C4 plants, we assume that there is no acclimation || OK_CO2 || 47 48 || bSV || undef, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, 0., -1.07, 0. || [J K-1 mol-1 °C-1] || b coefficient of the linear regression (a+bT) defining the Entropy term for Vcmax || See Table 3 of Kattge & Knorr (2007) - For C4 plants, we assume that there is no acclimation || OK_CO2 || 49 || C1 || 0.32 || [-] || Constant used in the formulation of the ratio of || || ROUGH_DYN || 50 || C2 || 0.264 || [-] || Constant used in the formulation of the ratio of || || ROUGH_DYN || 51 || C3 || 15.1 || [-] || Constant used in the formulation of the ratio of || || ROUGH_DYN || 48 52 || CANOPY_EXTINCTION || n || [FLAG] || Use canopy radiative transfer model? || set to TRUE if canopy radiative transfer model is used for biogenic emissions || CHEMISTRY_BVOC || 49 53 || CANOPY_MULTILAYER || n || [FLAG] || Use canopy radiative transfer model with multi-layers || set to TRUE if canopy radiative transfer model is with multiple layers || CANOPY_EXTINCTION || … … 52 56 || CARBON_TAU_ISLOW || 5.48 || [days] || residence times in carbon pools || || OK_STOMATE || 53 57 || CB || 5.0 || [-] || Constant of the Louis scheme || || OK_SECHIBA || 58 || C_BETA_ACET || 0.1 || [] || Acetone temperature dependency coefficient || || CHEMISTRY_BVOC || 59 || C_BETA_METH || 0.08 || [] || Methanol temperature dependency coefficient || || CHEMISTRY_BVOC || 60 || C_BETA_MONO || 0.1 || [] || Monoterpenes temperature dependency coefficient || || CHEMISTRY_BVOC || 61 || C_BETA_OXYVOC || 0.13 || [] || Other oxygenated BVOC temperature dependency coefficient || || CHEMISTRY_BVOC || 62 || C_BETA_SESQ || 0.17 || [] || Sesquiterpenes temperature dependency coefficient || || CHEMISTRY_BVOC || 54 63 || CC || 5.0 || [-] || Constant of the Louis scheme || || OK_SECHIBA || 55 64 || CD || 5.0 || [-] || Constant of the Louis scheme || || OK_SECHIBA || 65 || Cdrag_foliage || 0.2 || [-] || Drag coefficient of the foliage || || ROUGH_DYN || 56 66 || CDRAG_FROM_GCM || y || [FLAG] || Keep cdrag coefficient from gcm. || Set to .TRUE. if you want q_cdrag coming from GCM (if q_cdrag on initialization is non zero). Keep cdrag coefficient from gcm for latent and sensible heat fluxes. || OK_SECHIBA || 57 || CHECK_CWRR || n || [FLAG] || Should we check detailed CWRR water balance ? || This parameters allows the user to check the detailed water balance in each time step of CWRR. || HYDROL_CWRR || 67 || CHECK_CWRR2 || n || [FLAG] || Caluculate diagnostics to check CWRR water balance || The verifictaions are done in post-treatement || HYDROL_CWRR2 || 68 || CHECK_CWRR || n || [FLAG] || Check detailed CWRR water balance || This parameters allows the user to check the detailed water balance in each time step of CWRR and stop execution if not correct || HYDROL_CWRR || 58 69 || CHECK_WATERBAL || n || [FLAG] || Should we check the global water balance || This parameters allows the user to check the integrated water balance at the end of each time step || OK_SECHIBA || 59 70 || CHEMISTRY_BVOC || n || [FLAG] || Activate calculations for BVOC || set to TRUE if biogenic emissions calculation is to be activated || OK_SECHIBA || … … 65 76 || CLAY_FRACTION || 0.2 || [-] || Fraction of the clay fraction (0-dim mode) || Determines the fraction of clay in the grid box. || IMPOSE_VEG and IMPOSE_SOIL || 66 77 || CLAYFRACTION_DEFAULT || 0.2 || [-] || default fraction of clay || || OK_SECHIBA || 78 || C_LDF_ACET || 0.2 || [] || Acetone fraction dependancy to light || || CHEMISTRY_BVOC || 79 || C_LDF_METH || 0.8 || [] || Methanol fraction dependancy to light || || CHEMISTRY_BVOC || 80 || C_LDF_MONO || 0.6 || [] || Monoterpenes fraction dependancy to light || || CHEMISTRY_BVOC || 81 || C_LDF_SESQ || 0.5 || [] || Sesquiterpenes fraction dependancy to light || || CHEMISTRY_BVOC || 67 82 || CM_ZERO_CARBRES || undef, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4,1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4 || [g/g/day] || maintenance respiration coefficient at 0 deg C, for carbohydrate reserve, tabulated || || OK_STOMATE || 68 83 || CM_ZERO_FRUIT || undef, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4,1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4, 1.19E-4 || [g/g/day] || maintenance respiration coefficient at 0 deg C, for fruits, tabulated || || OK_STOMATE || … … 85 100 || CONDVEG_SNOWA || 1.E+20 || [-] || The snow albedo used by SECHIBA || This option allows the user to impose a snow albedo. Default behaviour is to use the model of snow albedo developed by Chalita (1993). || OK_SECHIBA || 86 101 || CONDVEG_Z0 || 0.15 || [m] || Surface roughness || Surface rougness to be used on the point if a 0-dim version of SECHIBA is used. Look at the description of the forcing data for the correct value. || IMPOSE_AZE || 102 || Ct || 0.01 || [-] || Heat transfer coefficient of the leaf || || ROUGH_DYN || 87 103 || CWRR_AKS_A0 || 0.00012 || [1/mm] || fitted value for relation log((a-a0)/(a_ref-a0)) || || HYDROL_CWRR || 88 104 || CWRR_AKS_POWER || 0.53 || [-] || fitted value for relation log((a-a0)/(a_ref-a0)) || || HYDROL_CWRR || … … 101 117 || DEPTH_TOPTHICK || 9.77517107e-04 || m || Thickness of upper most Layer || Thickness of top hydrology layer for soil moisture (CWRR). || || 102 118 || DEW_VEG_POLY_COEFF || 0.887773, 0.205673, 0.110112, 0.014843, 0.000824, 0.000017 || [-] || coefficients of the polynome of degree 5 for the dew || || OK_SECHIBA || 119 || D_gm || undef, 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., undef, 437400., undef || [J mol-1] || Energy of deactivation for gm || See Table 2 of Yin et al. (2009) || OK_CO2 || 103 120 || DIA_COEFF || 4., 0.5 || [-] || || || OK_STOMATE || 104 121 || DIFFUCO_LEAFCI || 233. || [ppm] || Initial leaf CO2 level if not found in restart || The initial value of leaf_ci if its value is not found in the restart file. This should only be used if the model is started without a restart file. || OK_SECHIBA || … … 109 126 || DO_PONDS || n || [FLAG] || Should we include ponds || This parameters allows the user to ask the model to take into account the ponds and return the water into the soil moisture. If this is activated, then there is no reinfiltration computed inside the hydrol module. || HYDROL_CWRR || 110 127 || DO_PONDS || n || [FLAG] || Should we include ponds || This parameters allows the user to ask the model to take into account the ponds and return the water into the soil moisture. It then can go back to the atmopshere. This tried to simulate little ponds especially in West Africa. || RIVER_ROUTING || 128 || DO_RSOIL || n || [FLAG] || Should we reduce soil evaporation with a soil resistance || This parameters allows the user to ask the model to calculate a soil resistance to reduce the soil evaporation || HYDROL_CWRR || 111 129 || DO_SWAMPS || n || [FLAG] || Should we include swamp parameterization || This parameters allows the user to ask the model to take into account the swamps and return the water into the bottom of the soil. It then can go back to the atmopshere. This tried to simulate internal deltas of rivers. || RIVER_ROUTING || 112 130 || DOWNREG_CO2 || 0., 0.38, 0.38, 0.28, 0.28, 0.28, 0.22, 0.22, 0.22, 0.26, 0.26, 0.26, 0.26 || [-] || coefficient for CO2 downregulation (unitless) || || OK_CO2 || … … 121 139 || ECUREUIL || undef, .0, 1., .0, .0, 1., .0, 1., 1., 1., 1., 1., 1. || [-] || fraction of primary leaf and root allocation put into reserve || || OK_STOMATE || 122 140 || E_gamma_star || undef, 37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830. || [J mol-1] || Energy of activation for gamma_star || See Medlyn et al. (2002) from Bernacchi al. (2001) || OK_CO2 || 141 || E_gm || undef, 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., undef, 49600., undef || [J mol-1] || Energy of activation for gm || See Table 2 of Yin et al. (2009) || OK_CO2 || 123 142 || E_Jmax || undef, 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 77900., 49884., 77900. || [J mol-1] || Energy of activation for Jmax || See Table 2 of Yin et al. (2009) for C4 plants and Kattge & Knorr (2007) for C3 plants (table 3) || OK_CO2 || 124 143 || E_KmC || undef, 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430. || [J mol-1] || Energy of activation for KmC || See Medlyn et al. (2002) || OK_CO2 || 125 144 || E_KmO || undef, 36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380. || [J mol-1] || Energy of activation for KmO || See Medlyn et al. (2002) || OK_CO2 || 126 || EM_FACTOR_ACETAL || 0., 0.1, 0.1, 0.3, 0.15, 0.1, 0.3, 0.3, 0.3, 0.1, 0.15, 0.025, 0.025 || [ugC/g/h] || Acetaldehyde emissions factor || || CHEMISTRY_BVOC || 127 || EM_FACTOR_ACETIC || 0., 0.002, 0.002, 0.006, 0.003, 0.002, 0.006, 0.006, 0.006, 0.002, 0.003, 0.0005, 0.0005 || [ugC/g/h] || Acetic Acid emissions factor || || CHEMISTRY_BVOC || 128 || EM_FACTOR_ACETONE || 0., 0.29, 0.29, 0.87, 0.43, 0.29, 0.87, 0.87, 0.87, 0.29, 0.43, 0.07, 0.07 || [ugC/g/h] || Acetone emissions factor || || CHEMISTRY_BVOC || 129 || EM_FACTOR_FORMAL || 0., 0.07, 0.07, 0.2, 0.1, 0.07, 0.2, 0.2, 0.2, 0.07, 0.1, 0.017, 0.017 || [ugC/g/h] || Formaldehyde emissions factor || || CHEMISTRY_BVOC || 130 || EM_FACTOR_FORMIC || 0., 0.01, 0.01, 0.03, 0.015, 0.01, 0.03, 0.03, 0.03, 0.01, 0.015, 0.0025, 0.0025 || [ugC/g/h] || Formic Acid emissions factor || || CHEMISTRY_BVOC || 131 || EM_FACTOR_ISOPRENE || 0., 24., 24., 8., 16., 45., 8., 8., 8., 16., 24., 5., 5. || [ugC/g/h] || Isoprene emission factor || || CHEMISTRY_BVOC || 132 || EM_FACTOR_MBO || 0., 0., 0., 20.0, 0., 0., 0., 0., 0., 0., 0., 0., 0. || [ugC/g/h] || MBO emissions factor || || CHEMISTRY_BVOC || 133 || EM_FACTOR_METHANOL || 0., 0.6, 0.6, 1.8, 0.9, 0.6, 1.8, 1.8, 1.8, 0.6, 0.9, 2., 2. || [ugC/g/h] || Methanol emissions factor || || CHEMISTRY_BVOC || 134 || EM_FACTOR_MONOTERPENE || 0., 0.8, 0.8, 2.4, 1.2, 0.8, 2.4, 2.4, 2.4, 0.8, 1.2, 0.2, 0.2 || [ugC/g/h] || Monoterpene emission factor || || CHEMISTRY_BVOC || 145 || EM_FACTOR_3CARENE || 0., 0.13, 0.13, 0.42, 0.02, 0.055, 0.42,0.025, 0.125, 0.085, 0.085, 0.065, 0.065 || [ugC/g/h] || 3-Carene emission factor || || CHEMISTRY_BVOC || 146 || EM_FACTOR_ACETAL || 0., 0.2, 0.2, 0.2, 0.2, 0.25, 0.25, 0.16, 0.16, 0.12, 0.12, 0.035, 0.02 || [ugC/g/h] || Acetaldehyde emissions factor || || CHEMISTRY_BVOC || 147 || EM_FACTOR_ACETIC || 0., 0.025, 0.025,0.025,0.022,0.08,0.025,0.022,0.013,0.012,0.012,0.008,0.008 || [ugC/g/h] || Acetic Acid emissions factor || || CHEMISTRY_BVOC || 148 || EM_FACTOR_ACETONE || 0., 0.25, 0.25, 0.3, 0.2, 0.33, 0.3, 0.25, 0.25, 0.2, 0.2, 0.08, 0.08 || [ugC/g/h] || Acetone emissions factor || || CHEMISTRY_BVOC || 149 || EM_FACTOR_APINENE || 0., 1.35, 1.35, 0.85, 0.95, 0.75, 0.85, 0.60, 1.98, 0.30, 0.30, 0.09, 0.09 || [ugC/g/h] || Alfa pinene emission factor || || CHEMISTRY_BVOC || 150 || EM_FACTOR_BPINENE || 0., 0.30, 0.30, 0.35, 0.25, 0.20, 0.35, 0.12, 0.45, 0.16, 0.12, 0.05, 0.05 || [ugC/g/h] || Beta pinene emission factor || || CHEMISTRY_BVOC || 151 || EM_FACTOR_CAMPHENE || 0., 0.15, 0.15, 0.10, 0.10, 0.01, 0.10, 0.01, 0.07, 0.07, 0.08, 0.01, 0.01 || [ugC/g/h] || Camphene emission factor || || CHEMISTRY_BVOC || 152 || EM_FACTOR_FORMAL || 0., 0.04, 0.04, 0.08, 0.04, 0.04, 0.04, 0.04, 0.04, 0.025, 0.025, 0.013, 0.013 || [ugC/g/h] || Formaldehyde emissions factor || || CHEMISTRY_BVOC || 153 || EM_FACTOR_FORMIC || 0., 0.015, 0.015, 0.02, 0.02, 0.025, 0.025, 0.015, 0.015,0.010,0.010,0.008,0.008 || [ugC/g/h] || Formic Acid emissions factor || || CHEMISTRY_BVOC || 154 || EM_FACTOR_ISOPRENE || 0., 24., 24., 8., 16., 45., 8., 18., 0.5, 12., 18., 5., 5. || [ugC/g/h] || Isoprene emission factor || || CHEMISTRY_BVOC || 155 || EM_FACTOR_LIMONENE || 0., 0.25, 0.25, 0.20, 0.25, 0.14, 0.20, 0.135, 0.11, 0.19, 0.42, 0.03, 0.03 || [ugC/g/h] || Limonene emission factor || || CHEMISTRY_BVOC || 156 || EM_FACTOR_MBO || 0., 2.e-5, 2.e-5, 1.4, 2.e-5, 2.e-5, 0.14, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5 || [ugC/g/h] || MBO emissions factor || || CHEMISTRY_BVOC || 157 || EM_FACTOR_METHANOL || 0., 0.8, 0.8, 1.8, 0.9, 1.9, 1.8, 1.8, 1.8, 0.7, 0.9, 2., 2. || [ugC/g/h] || Methanol emissions factor || || CHEMISTRY_BVOC || 158 || EM_FACTOR_MONOTERPENE || 0., 2.0, 2.0, 1.8, 1.4, 1.6, 1.8, 1.4, 1.8, 0.8, 0.8, 0.22, 0.22 || [ugC/g/h] || Monoterpene emission factor || || CHEMISTRY_BVOC || 159 || EM_FACTOR_MYRCENE || 0., 0.20, 0.20, 0.12, 0.11, 0.065, 0.12, 0.036, 0.075, 0.08, 0.085, 0.015, 0.015 || [ugC/g/h] || Myrcene emission factor || || CHEMISTRY_BVOC || 135 160 || EM_FACTOR_NO_DRY || 0., 8.60, 0.40, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 2.65, 2.65, 2.65, 2.65 || [ngN/m^2/s] || NOx emissions factor dry soil emissions and exponential dependancy factor || || CHEMISTRY_BVOC || 136 161 || EM_FACTOR_NO_WET || 0., 2.6, 0.06, 0.03, 0.03, 0.03, 0.03, 0.03, 0.03, 0.36, 0.36, 0.36, 0.36 || [ngN/m^2/s] || NOx emissions factor wet soil emissions and exponential dependancy factor || || CHEMISTRY_BVOC || 137 162 || EM_FACTOR_ORVOC || 0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5 || [ugC/g/h] || ORVOC emissions factor || || CHEMISTRY_BVOC || 163 || EM_FACTOR_OTHERMONOT || 0., 0.17, 0.17, 0.11, 0.11, 0.125, 0.11, 0.274, 0.01, 0.15, 0.155, 0.035, 0.035 || [ugC/g/h] || Other monoterpenes emission factor || || CHEMISTRY_BVOC || 138 164 || EM_FACTOR_OVOC || 0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5 || [ugC/g/h] || OVOC emissions factor || || CHEMISTRY_BVOC || 165 || EM_FACTOR_SABINENE || 0., 0.20, 0.20, 0.12, 0.17, 0.70, 0.12, 0.50, 0.09, 0.085, 0.075, 0.02, 0.02 || [ugC/g/h] || Sabinene emission factor || || CHEMISTRY_BVOC || 166 || EM_FACTOR_SESQUITERP || 0., 0.45, 0.45, 0.13, 0.3, 0.36, 0.15, 0.3, 0.25, 0.6, 0.6, 0.08, 0.08 || [ugC/g/h] || Sesquiterpenes emission factor || || CHEMISTRY_BVOC || 167 || EM_FACTOR_TBOCIMENE || 0., 0.25, 0.25, 0.13, 0.09, 0.26, 0.13, 0.20, 0.085, 0.18, 0.18, 0.01, 0.01 || [ugC/g/h] || T-beta-ocimene emission factor || || CHEMISTRY_BVOC || 139 168 || ENERBIL_EVAPOT || 0.0 || || Initial Soil Potential Evaporation || The initial value of soil potential evaporation if its value is not found in the restart file. This should only be used if the model is started without a restart file. || OK_SECHIBA || 140 169 || ENERBIL_TSURF || 280. || Kelvin [K] || Initial temperature if not found in restart || The initial value of surface temperature if its value is not found in the restart file. This should only be used if the model is started without a restart file. || OK_SECHIBA || 141 170 || EPS_CARBON || 0.01 || [%] || Allowed error on carbon stock || || SPINUP_ANALYTIC || 142 171 || E_Rd || undef, 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390. || [J mol-1] || Energy of activation for Rd || See Table 2 of Yin et al. (2009) || OK_CO2 || 172 || E_Sco || undef, -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460. || [J mol-1] || Energy of activation for Sco || See Table 2 of Yin et al. (2009) - Value for C4 plants is not mentioned - We use C3 for all plants || OK_CO2 || 143 173 || ESTABLISH_SCAL_FACT || 5. || [-] || || || OK_DGVM || 144 174 || ESTAB_MAX_GRASS || 0.12 || [-] || Maximum grass establishment rate || || OK_DGVM || … … 148 178 || EVERYWHERE_INIT || 0.05 || [-] || || || OK_DGVM || 149 179 || EXT_COEFF || .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5 || [-] || extinction coefficient of the Monsi&Seaki relationship (1953) || || OK_SECHIBA or OK_STOMATE || 180 || EXT_COEFF_VEGETFRAC || 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1. || [-] || extinction coefficient used for the calculation of the bare soil fraction || || OK_SECHIBA or OK_STOMATE || 150 181 || FAST_TCST || fast_tcst_cwrr or fast_tcst_chois depending on flag HYDROL_CWRR || [days] || Time constant for the fast reservoir || This parameters allows the user to fix the time constant (in days) of the fast reservoir in order to get better river flows for particular regions. || RIVER_ROUTING || 151 182 || F_FRUIT || 0.1 || [-] || Standard fruit allocation || || OK_STOMATE || … … 161 192 || FORCESOIL_NB_YEAR || 1 || [years] || Number of years saved for carbon spinup. || Number of years saved for carbon spinup. If internal parameter cumul_Cforcing is TRUE in stomate.f90 Then this parameter is forced to one. || OK_STOMATE || 162 193 || FORCESOIL_STEP_PER_YEAR || 365 || [days, months, year] || Number of time steps per year for carbon spinup. || Number of time steps per year for carbon spinup. || OK_STOMATE || 163 || FORCING_FILE || forcing_file.nc || [FILE] || Name of file containing the forcing data || This is the name of the file which should be opened for reading the forcing data of the dim0 model. The format of the file has to be netCDF and COADS compliant. || [-] ||164 194 || FPC_CRIT || 0.95 || [-] || critical fpc, needed for light competition and establishment || || OK_STOMATE || 165 195 || fpseudo || undef, undef, undef, undef, undef, undef, undef, undef, undef, undef, 0.1, undef, 0.1 || [-] || Fraction of electrons at PSI that follow pseudocyclic transport || See Table 2 of Yin et al. (2009) - Values for C3 plants are not used || OK_CO2 || … … 181 211 || fr_dT || 2.0 || [K] || Freezing window || || OK_SECHIBA || 182 212 || FREE_DRAIN_COEF || 1.0 1.0 1.0 || [-] || Coefficient for free drainage at bottom, dimension nstm || The initial value of free drainage coefficient if its value is not found in the restart file. This should only be used if the model is started without a restart file. || HYDROL_CWRR || 213 || FROZ_FRAC_CORR || 1. || [-] || Coefficient for the frozen fraction correction || || HYDROL_CWRR and OK_FREEZE || 183 214 || g0 || undef, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.01875, 0.00625, 0.01875 || [mol m−2 s−1 bar−1] || Residual stomatal conductance when irradiance approaches zero || Value from ORCHIDEE - No other reference. || OK_CO2 || 184 215 || gamma_star25 || undef, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75 || [ubar] || Ci-based CO2 compensation point in the absence of Rd at 25°C (ubar) || See Medlyn et al. (2002) for C3 plants - For C4 plants, we use the same value (probably uncorrect) || OK_CO2 || 216 || GB_REF || 1./25. || [s m-1] || Leaf bulk boundary layer resistance || || OK_CO2 || 185 217 || gbs || undef, undef, undef, undef, undef, undef, undef, undef, undef, undef, 0.003, undef, 0.003 || [mol m−2 s−1 bar−1] || Bundle-sheath conductance || See legend of Figure 6 of Yin et al. (2009) || OK_CO2 || 186 218 || GDD_CRIT_ESTAB || 150. || [-] || minimum gdd for establishment of saplings || || OK_STOMATE || … … 191 223 || GDD_THRESHOLD || 5. || [days] || || GDD : Growing-Degree-Day || OK_STOMATE || 192 224 || GET_SLOPE || n || [FLAG] || Read slopes from file and do the interpolation || Needed for reading the slopesfile and doing the interpolation. This will be || || 225 || gm25 || undef, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, undef, 0.4, undef || [mol m-2 s-1 bar-1] || Mesophyll diffusion conductance at 25ðC || See legend of Figure 6 of Yin et al. (2009) and review by Flexas et al. (2008) - gm is not used for C4 plants || OK_CO2 || 193 226 || GPPFRAC_DORMANCE || 0.2 || [-] || rapport maximal GPP/GGP_max pour dormance || || OK_STOMATE || 194 227 || GREEN_AGE_DEC || 0.5 || [-] || || || OK_STOMATE || … … 208 241 || HYDROL_DSP || 999999. || [m] || Initial dry soil above upper reservoir if not found in restart || The initial value of dry soil above upper reservoir if its value is not found in the restart file. This should only be used if the model is started without a restart file. The default behaviour is to compute it from the variables above. Should be OK most of the time. || OK_SECHIBA || 209 242 || HYDROL_GQSB || 0.0 || [kg/m^2] || Initial upper soil moisture if not found in restart || The initial value of upper soil moisture if its value is not found in the restart file. This should only be used if the model is started without a restart file. || OK_SECHIBA || 210 || HYDROL_HUMCSTE || humcste_ cwrr or humcste_mct depending on flag HYDROL_CWRR|| [m] || Root profile || See module constantes_mtc for different default values || OK_SECHIBA ||243 || HYDROL_HUMCSTE || humcste_ref2m or humcste_ref4m depending on zmaxh || [m] || Root profile || See module constantes_mtc for different default values || OK_SECHIBA || 211 244 || HYDROL_HUMR || 1.0 || [-] || Initial soil moisture stress if not found in restart || The initial value of soil moisture stress if its value is not found in the restart file. This should only be used if the model is started without a restart file. || OK_SECHIBA || 212 245 || HYDROL_MOISTURE_CONTENT || 0.3 || [m3/m3] || Soil moisture on each soil tile and levels || The initial value of mc if its value is not found in the restart file. This should only be used if the model is started without a restart file. || HYDROL_CWRR || … … 276 309 || MASS_RATIO_HEART_SAP || 3. || [-] || mass ratio (heartwood+sapwood)/sapwood || || OK_STOMATE || 277 310 || MAXDIA_COEFF || 100., 0.01 || [-] || || || OK_STOMATE || 311 || MAX_LAKE_RESERVOIR || 7000 || [kg/m2(routing area)] || Maximum limit of water in lake_reservoir || || RIVER_ROUTING || 278 312 || MAX_LTOLSR || 0.5 || [-] || extrema of leaf allocation fraction || || OK_STOMATE || 279 313 || MAXMASS_SNOW || 3000. || [kg/m^2] || The maximum mass of a snow || || OK_SECHIBA or HYDROL_CWRR || … … 302 336 || NCD_MAX_YEAR || 3. || [days] || || NCD : Number of Chilling Days || OK_STOMATE || 303 337 || NEW_TURNOVER_TIME_REF || 20. || [days] || || || OK_STOMATE || 338 || N_FERTIL_FILE || orchidee_fertilizer_1995.nc || - || File name || ... || CHEMISTRY_BVOC and NOx_FERTILIZERS_USE || 339 || N_FERTIL_FILE || orchidee_fertilizer_1995.nc || - || File name || || CHEMISTRY_BVOC and NOx_FERTILIZERS_USE || 304 340 || NGD_CRIT || undef, undef, undef, undef, undef, undef, undef, 0., undef, undef, undef, undef, undef || [days] || critical ngd, tabulated. Threshold -5 degrees || NGD : Number of Growing Days. || OK_STOMATE || 305 341 || NIR_DRY || 0.48, 0.44, 0.40, 0.36, 0.32, 0.28, 0.24, 0.20, 0.55 || [-] || The correspondance table for the soil color numbers and their albedo || || OK_SECHIBA || … … 346 382 || POND_CRI || 2000. || [mm] || Potential height for which all the basin is a pond || || DO_FLOODPLAINS or DO_PONDS || 347 383 || POROS || 0.41 || [-] || Soil porosity || From USDA classification, mean value || OK_SECHIBA || 384 || Prandtl || 0.71 || [-] || Prandtl number used in the calculation of Ct* || || ROUGH_DYN || 348 385 || PRECIP_CRIT || 100. || [mm/year] || minimum precip || || OK_STOMATE || 349 386 || PREF_SOIL_VEG || 1, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3 || [-] || The soil tile number for each vegetation || Gives the number of the soil tile on which we will put each vegetation. This allows to divide the hydrological column || OK_SECHIBA or OK_STOMATE || … … 352 389 || R0 || undef, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30 || [-] || Standard root allocation || || OK_STOMATE || 353 390 || RATIO_GEOM_BELOW || 2 || - || Ratio of the geometrical series defining the thickness below DEPTH_GEOM || Ratio of the geometrical series defining the thickness below DEPTH_GEOM. || || 391 || RATIO_Z0M_Z0H || 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0 || [-] || Ratio between z0m and z0h || || OK_SECHIBA || 354 392 || RAYT_CSTE || 125 || [W.m^{-2}] || Constant in the computation of surface resistance || || OK_SECHIBA || 355 || READ_PERMAFROST_MAP || FALSE || [FLAG] || Read information about ice content, overburden and permafrost type from IPA map || || || 356 || READ_REFTEMP || False || [FLAG] || Initialize soil temperature using climatological temperature || || || 393 || READ_REFTEMP || True/False depening on OK_FREEZE || [FLAG] || Initialize soil temperature using climatological temperature || || || 357 394 || REF_GREFF || 0.035 || [1/year] || Asymptotic maximum mortality rate || Set asymptotic maximum mortality rate from Sitch 2003 (they use 0.01) (year^{-1}) || OK_STOMATE || 358 395 || REFINEBOTTOM || .FALSE. || - || Depth at which the hydrology layers will be refined towards the bottom. || Depth at which the hydrology layers will be refined towards the bottom. || || 359 || REFTEMP_FILE || NONE || [FILE] || Name of file from which the reference temperature can be read || Specify filename if the initial reference temperature should be read from file. Otherwise, the reference temperature is calculated. || OK_STOMATE ||360 396 || REINF_SLOPE || 0.1 || [-] || Slope coef for reinfiltration || Determines the reinfiltration ratio in the grid box due to flat areas || IMPOSE_VEG || 361 397 || RENORM_LAI || n || [FLAG] || flag to force LAI renormelization || If true, the laimap will be renormalize between llaimin and llaimax parameters. || LAI_MAP || … … 368 404 || RIVER_DESC || n || [FLAG] || Writes out a description of the rivers || This flag allows to write out a file containing the list of rivers which are beeing simulated. It provides location of outflow drainage area, name and ID. || RIVER_ROUTING || 369 405 || RIVER_ROUTING || n || [FLAG] || Decides if we route the water or not || This flag allows the user to decide if the runoff and drainage should be routed to the ocean and to downstream grid boxes. || OK_SECHIBA || 406 || ROUGH_DYN || y || [FLAG] || Account for a dynamic roughness height || If this flag is set to true (y) then the roughness height is computed dynamically, varying with LAI || OK_SECHIBA || 370 407 || ROUGHHEIGHT || 0.0 || [m] || Height to be added to the height of the first level || ORCHIDEE assumes that the atmospheric level height is counted from the zero wind level. Thus to take into account the roughness of tall vegetation we need to correct this by a certain fraction of the vegetation height. This is called the roughness height in ORCHIDEE talk. || IMPOSE_AZE || 371 408 || ROUTING_FILE || routing.nc || [FILE] || Name of file which contains the routing information || The file provided here should alow the routing module to read the high resolution grid of basins and the flow direction from one mesh to the other. || RIVER_ROUTING || … … 374 411 || RVEG_PFT || 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1. || [-] || Artificial parameter to increase or decrease canopy resistance. || This parameter is set by PFT. || OK_SECHIBA || 375 412 || S0 || undef, .25, .25, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30 || [-] || Standard sapwood allocation || || OK_STOMATE || 413 || Sco25 || undef, 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2590., 2800., 2590. || [bar bar-1] || Relative CO2 /O2 specificity factor for Rubisco at 25°C || See Table 2 of Yin et al. (2009) || OK_CO2 || 376 414 || SECHIBA_FRAC_NOBIO || 0.0 || [-] || Fraction of other surface types within the mesh (0-dim mode) || The fraction of ice, lakes, etc. is read from the restart file. If it is not found there we will use the values provided here. For the moment, there is only ice. || IMPOSE_VEG || 377 415 || SECHIBA_HISTFILE2 || n || [FLAG] || Flag to switch on histfile 2 for SECHIBA (hi-frequency ?) || This Flag switch on the second SECHIBA writing for hi (or low) frequency writing. This second output is optional and not written by default. || OK_SECHIBA || … … 392 430 || SENESCENCE_TEMP_C || undef, undef, undef, undef, undef, 12., undef, 7., 2., -1.375, 5., 5., 10. || [-] || critical temperature for senescence (C), constant c of aT^2+bT+c, tabulated || || OK_STOMATE || 393 431 || SENESCENCE_TYPE || none, none, dry, none, none, cold, none, cold, cold, mixed, mixed, mixed, mixed || [-] || type of senescence, tabulated || || OK_STOMATE || 432 || S_gm || undef, 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., undef, 1400., undef || [J K-1 mol-1] || Entropy term for gm || See Table 2 of Yin et al. (2009) || OK_CO2 || 394 433 || SLA || 1.5E-2, 1.53E-2, 2.6E-2, 9.26E-3, 2E-2, 2.6E-2, 9.26E-3, 2.6E-2, 1.9E-2, 2.6E-2, 2.6E-2, 2.6E-2, 2.6E-2 || [m^2/gC] || specif leaf area || || OK_STOMATE || 395 434 || SLOPE_NOREINF || 0.5 || [-] || See slope_noreinf above || The slope above which there is no reinfiltration || || … … 397 436 || SLOWPROC_HEIGHT || 0., 30., 30., 20., 20., 20., 15., 15., 15., .5, .6, 1., 1. || [m] || prescribed height of vegetation || || OK_SECHIBA || 398 437 || SLOW_TCST || n || [days] || Time constant for the slow reservoir || This parameters allows the user to fix the time constant (in days) of the slow reservoir in order to get better river flows for particular regions. || RIVER_ROUTING || 399 || SNOWA_AGED || 0.35, 0., 0., 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.18, 0.18, 0.18, 0.18 || [-] || Minimum snow albedo value for each vegetation type after aging (dirty old snow) || Values are from the Thesis of S. Chalita (1992) || OK_SECHIBA || 400 || SNOWA_DEC || 0.45, 0., 0., 0.06, 0.06, 0.11, 0.06, 0.11, 0.11, 0.52,0.52, 0.52, 0.52 || [-] || Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow || Values are from the Thesis of S. Chalita (1992) || OK_SECHIBA || 438 || SNOWA_AGED_NIR || 0.35, 0., 0., 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.18, 0.18, 0.18, 0.18 || [-] || Minimum snow albedo value for each vegetation type after aging (dirty old snow), near infrared albedo || Values are from the Thesis of S. Chalita (1992) || OK_SECHIBA || 439 || SNOWA_AGED_VIS || 0.5, 0., 0., 0.15, 0.14, 0.14, 0.15, 0.14, 0.22, 0.35, 0.35, 0.35, 0.35 || [-] || Minimum snow albedo value for each vegetation type after aging (dirty old snow), visible albedo || Values are from the Thesis of S. Chalita (1992), optimized on 04/07/2016 || OK_SECHIBA || 440 || SNOWA_DEC_NIR || 0.45, 0., 0., 0.06, 0.06, 0.11, 0.06, 0.11, 0.11, 0.52 ,0.52, 0.52, 0.52 || [-] || Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, near infrared albedo || Values are from the Thesis of S. Chalita (1992) || OK_SECHIBA || 441 || SNOWA_DEC_VIS || 0.45, 0., 0., 0.1, 0.06, 0.11, 0.10, 0.11, 0.18, 0.60, 0.60, 0.60, 0.60 || [-] || Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, visible albedo || Values are from the Thesis of S. Chalita (1992), optimized on 04/07/2016 || OK_SECHIBA || 401 442 || SNOWCRI || 1.5 || [kg/m^2] || Sets the amount above which only sublimation occures || || OK_SECHIBA or HYDROL_CWRR || 402 443 || SNOWCRI_ALB || 10. || [cm] || Critical value for computation of snow albedo || || OK_SECHIBA || 403 444 || SNOW_DENSITY || 330.0 || [-] || Snow density for the soil thermodynamics || || OK_SECHIBA || 404 445 || SNOW_HEAT_COND || 0.3 || [W.m^{-2}.K^{-1}] || Thermal Conductivity of snow || || OK_SECHIBA || 405 || SNOW_TRANS || 0. 3 || [m] || Transformation time constant for snow |||| OK_SECHIBA ||446 || SNOW_TRANS || 0.2 || [m] || Transformation time constant for snow || optimized on 04/07/2016 || OK_SECHIBA || 406 447 || SOILALB_FILE || soils_param.nc || [FILE] || Name of file from which the bare soil albedo || The name of the file to be opened to read the soil types from which we derive then the bare soil albedos. This file is 1x1 deg and based on the soil colors defined by Wilson and Henderson-Seller. || NOT(IMPOSE_AZE) || 407 448 || SOILCLASS_FILE || soils_param.nc || [FILE] || Name of file from which soil types are read || The name of the file to be opened to read the soil types. The data from this file is then interpolated to the grid of of the model. The aim is to get fractions for sand loam and clay in each grid box. This information is used for soil hydrology and respiration. || NOT(IMPOSE_VEG) || 408 449 || SOIL_FRACTIONS || undef_sechiba || [-] || Fraction of the 3 soil types (0-dim mode) || Determines the fraction for the 3 soil types in the mesh in the following order : sand loam and clay. || IMPOSE_VEG and IMPOSE_SOILT || 409 450 || SOIL_Q10 || 0.69 ( || [-] || || || OK_STOMATE || 451 || SOIL_REFTEMP_FILE || reftemp.nc || [FILE] || File with climatological soil temperature || || READ_REFTEMP || 410 452 || SOILTYPE_CLASSIF || zobler || [-] || Type of classification used for the map of soil types || The classification used in the file that we use here There are three classification supported: Zobler (7 converted to 3) and USDA (12) || !IMPOSE_VEG || 411 453 || SPINUP_ANALYTIC || n || BOOLEAN || Activation of the analytic resolution of the spinup. || Activate this option if you want to solve the spinup by the Gauss-Jordan method. || OK_STOMATE || … … 419 461 || STOMATE_IPCC_HIST_DT || 0. || [days] || STOMATE IPCC history time step || Time step of the STOMATE IPCC history file || OK_STOMATE || 420 462 || STOMATE_IPCC_OUTPUT_FILE || stomate_ipcc_history.nc || [FILE] || Name of file in which STOMATE's output is going to be written || This file is going to be created by the model and will contain the output from the model. This file is a truly COADS compliant netCDF file. It will be generated by the hist software from the IOIPSL package. || OK_STOMATE || 421 || STOMATE_OK_CO2 || n || [FLAG] || Activate CO2? || set to TRUE if photosynthesis is to be activated || OK_SECHIBA ||463 || STOMATE_OK_CO2 || y if OK_STOMATE else n || [FLAG] || Activate CO2? || set to TRUE if photosynthesis is to be activated || OK_SECHIBA || 422 464 || STOMATE_OK_DGVM || n || [FLAG] || Activate DGVM? || set to TRUE if DGVM is to be activated || OK_STOMATE || 423 || STOMATE_OK_STOMATE || n || [FLAG] || Activate STOMATE? || set to TRUE if STOMATE is to be activated || OK_SECHIBA and OK_CO2||465 || STOMATE_OK_STOMATE || n || [FLAG] || Activate STOMATE? || set to TRUE if STOMATE is to be activated || OK_SECHIBA || 424 466 || STOMATE_OUTPUT_FILE || stomate_history.nc || [FILE] || Name of file in which STOMATE's output is going to be written || This file is going to be created by the model and will contain the output from the model. This file is a truly COADS compliant netCDF file. It will be generated by the hist software from the IOIPSL package. || OK_STOMATE || 425 467 || STOMATE_RESTART_FILEIN || NONE || [FILE] || Name of restart to READ for initial conditions of STOMATE || This is the name of the file which will be opened to extract the initial values of all prognostic values of STOMATE. || STOMATE_OK_STOMATE || 426 468 || STOMATE_RESTART_FILEOUT || stomate_rest_out.nc || [FILE] || Name of restart files to be created by STOMATE || This is the name of the file which will be opened to write the final values of all prognostic values of STOMATE. || STOMATE_OK_STOMATE || 427 469 || STREAM_TCST || stream_tcst_cwrr or stream_tcst_chois depending on flag HYDROL_CWRR || [days] || Time constant for the stream reservoir || This parameters allows the user to fix the time constant (in days) of the stream reservoir in order to get better river flows for particular regions. || RIVER_ROUTING || 470 || STRESS_GM || 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0. || [-] || Stress on gm || || OK_SECHIBA or OK_STOMATE || 471 || STRESS_GS || 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0. || [-] || Stress on gs || || OK_SECHIBA or OK_STOMATE || 472 || STRESS_VCMAX || 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1. || [-] || Stress on vcmax || || OK_SECHIBA or OK_STOMATE || 428 473 || SWAMP_CST || 0.2 || [-] || Fraction of the river that flows back to swamps || This parameters allows the user to fix the fraction of the river transport that flows to swamps || RIVER_ROUTING || 429 474 || T_ALWAYS_ADD || 10. || [C] || monthly temp. above which temp. tendency doesn't matter || || OK_STOMATE || … … 446 491 || TAX_MAX || 0.8 || [-] || maximum fraction of allocatable biomass used for maintenance respiration || || OK_STOMATE || 447 492 || TCM_CRIT || undef, undef, undef, 5.0, 15.5, 15.5, -8.0, -8.0, -8.0, undef, undef, undef, undef || [C] || critical tcm, tabulated || || OK_STOMATE || 448 || TCST_SNOWA || 5.0 || [days] || Time constant of the albedo decay of snow |||| OK_SECHIBA ||493 || TCST_SNOWA || 10.0 || [days] || Time constant of the albedo decay of snow || optimized on 04/07/2016 || OK_SECHIBA || 449 494 || THERMOSOIL_NBLEV || Number of soil level || m || Number of soil level || Maximum depth of soil for soil moisture || HDYROL_CWRR || 450 || THERMOSOIL_TPRO || 280. || Kelvin [K] || Initial soil temperature profile if not found in restart || The initial value of the temperature profile in the soil if its value is not found in the restart file. This should only be used if the model is started without a restart file.Here we only require one value as we will assume a constant throughout the column. || OK_SECHIBA ||495 || THERMOSOIL_TPRO || 280. || Kelvin [K] || Initial soil temperature profile if not found in restart || The initial value of the temperature profile in the soil if its value is not found in the restart file. Here we only require one value as we will assume a constant throughout the column. || OK_SECHIBA || 451 496 || theta || undef, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7 || [−] || Convexity factor for response of J to irradiance || See Table 2 of Yin et al. (2009) || OK_CO2 || 452 497 || TLONG_REF_MAX || 303.1 || [K] || maximum reference long term temperature || || OK_STOMATE || … … 483 528 || WMAX_VEG || 150., 150., 150., 150., 150., 150., 150.,150., 150., 150., 150., 150., 150. || [kg/m^3] || Maximum field capacity for each of the vegetations (Temporary): max quantity of water || || OK_SECHIBA || 484 529 || WRITE_STEP2 || 1800.0 || [seconds] || Frequency in seconds at which to WRITE output || This variables gives the frequency the output 2 of the model should be written into the netCDF file. It does not affect the frequency at which the operations such as averaging are done. That is IF the coding of the calls to histdef are correct ! || SECHIBA_HISTFILE2 || 485 || WRITE_STEP || one_day || [seconds] || Frequency in seconds at which to WRITE output || This variables gives the frequency the output of the model should be written into the netCDF file. It does not affect the frequency at which the operations such as averaging are done. That is IF the coding of the calls to histdef are correct ! || OK_SECHIBA||530 || WRITE_STEP || one_day || [seconds] || Frequency in seconds for sechiba_history.nc file with IOIPSL || This variables gives the frequency in the output file sechiba_history.nc if using IOIPSL. This variable is not read if XIOS is activated. || OK_SECHIBA, NOT XIOS_ORCHIDEE_OK || 486 531 || xansmax || 0.85 || [-] || maximum snow albedo || || OK_SECHIBA || 487 532 || xansmin || 0.50 || [-] || minimum snow albedo || || OK_SECHIBA || 488 533 || xans_t || 0.24 || [S-1] || albedo decay rate for the wet snow || || OK_SECHIBA || 489 534 || xans_todry || 0.008 || [S-1] || albedo decay rate for the dry snow || || OK_SECHIBA || 490 || XIOS_ORCHIDEE_OK || n|| [FLAG] || Use XIOS for writing diagnostics file || Compiling and linking with XIOS library is necessary. || ||535 || XIOS_ORCHIDEE_OK || y || [FLAG] || Use XIOS for writing diagnostics file || Compiling and linking with XIOS library is necessary. || || 491 536 || xrhosmax || 750 || [-] || maximum snow density || || OK_SECHIBA || 492 537 || xsnowrhohold || 200.0 || [kg/m3] || snow density || || OK_SECHIBA || … … 494 539 || xwsnowholdmax2 || 0.10 || [-] || snow holding capacity 2 || || OK_SECHIBA || 495 540 || Z0_BARE || 0.01 || [m] || bare soil roughness length || || OK_SECHIBA || 496 || Z0CDRAG_AVE || y || [FLAG] || Average method for z0 || If this flag is set to true (y) then the neutral Cdrag is averaged instead of the log(z0). This should be the prefered option. We still wish to keep the other option so we can come back if needed. If this is || OK_SECHIBA ||497 541 || Z0_ICE || 0.001 || [m] || ice roughness length || || OK_SECHIBA || 498 || Z0_OVER_HEIGHT || 1/16. || [-] || to get z0 from height || || OK_SECHIBA||542 || Z0_OVER_HEIGHT || 0., 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625 || [-] || factor to calculate roughness height from height of canopy || || OK_SECHIBA || 499 543 || Z_DECOMP || 0.2 || [m] || scaling depth for soil activity || || OK_STOMATE || 500 544 || Z_NITROGEN || 0.2 || [m] || scaling depth for nitrogen limitation || || OK_STOMATE || … … 511 555 || ZSNOWTHRMCOND_BVAP || -2.5425 || [W/m] || Thermal conductivity Coef 2 water vapor || || OK_SECHIBA || 512 556 || ZSNOWTHRMCOND_CVAP || -289.99 || [K] || Thermal conductivity Coef 3 water vapor || || OK_SECHIBA || 557 || ZWT_FORCE || undef undef undef || [m] || Prescribed water depth, dimension nstm || The initial value of zwt_force if its value is not found in the restart file. undef corresponds to a case whith no forced WT. This should only be used if the model is started without a restart file. || HYDROL_CWRR || 513 558 514 559 Following parameters are only available in offline use of ORCHIDEE:
