1 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
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2 | % |
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3 | % Build a ROMS climatology file |
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4 | % |
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5 | % Extrapole and interpole temperature and salinity from a |
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6 | % Climatology to get boundary and initial conditions for |
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7 | % ROMS (climatology and initial netcdf files) . |
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8 | % Get data from ORCA 05 climatology |
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9 | % |
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10 | % Data input format (netcdf): |
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11 | % temperature(T, Z, Y, X) |
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12 | % T : time [Months] |
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13 | % Z : Depth [m] |
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14 | % Y : Latitude [degree north] |
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15 | % X : Longitude [degree east] |
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16 | % |
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17 | % Data source : ORCA 05 Lionel Gourdeau 2005 |
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18 | % |
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19 | % Lefevre Jerome, IRD, 2005. |
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20 | % |
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21 | % Version of 10-AUG-2005 |
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22 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
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23 | clear all |
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24 | close all |
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25 | %%%%%%%%%%%%%%%%%%%%% USERS DEFINED VARIABLES %%%%%%%%%%%%%%%%%%%%%%%% |
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26 | % |
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27 | % Title |
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28 | % |
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29 | title='Climatology'; |
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30 | % |
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31 | % Switches for selecting what to process (1=ON) |
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32 | % |
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33 | makeclim=1; %1: process boundary data |
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34 | makeoa=1; %1: process oa data |
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35 | makeini=1; %1: process initial data |
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36 | % |
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37 | % Grid file name - Climatology file name |
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38 | % Initial file name - OA file name |
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39 | % |
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40 | %grdname='roms_fd_plat_3000m_grd.nc'; |
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41 | grdname='roms_grd.nc'; |
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42 | clmname='roms_clm_r05.nc'; |
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43 | ininame='roms_ini_r05.nc'; |
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44 | oaname ='roms_oa_r05.nc'; |
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45 | |
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46 | % |
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47 | % Vertical grid parameters |
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48 | % !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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49 | % !!! WARNING WARNING WARNING WARNING WARNING !!! |
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50 | % !!! THESE MUST IDENTICAL IN THE .IN FILE !!! |
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51 | % !!! WARNING WARNING WARNING WARNING WARNING !!! |
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52 | % !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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53 | % |
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54 | theta_s=6.; |
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55 | theta_b=0.; |
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56 | hc=5; |
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57 | N=30; % number of vertical levels (rho) |
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58 | % |
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59 | % Open boundaries switches |
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60 | % !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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61 | % !!! WARNING WARNING WARNING WARNING WARNING !!! |
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62 | % !!! MUST BE CONFORM TO THE CPP SWITCHES !!! |
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63 | % !!! WARNING WARNING WARNING WARNING WARNING !!! |
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64 | % !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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65 | % |
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66 | obc=[1 0 1 1]; % open boundaries (1=open , [S E N W]) |
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67 | % |
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68 | % Day of initialisationbarotropic_currents |
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69 | % |
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70 | tini=15; |
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71 | % |
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72 | % Set times and cycles: monthly climatology for all data |
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73 | % |
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74 | time=[15:30:345]; % time |
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75 | cycle=365; % cycle |
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76 | % |
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77 | % Data climatology file name: |
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78 | % |
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79 | Dir_Data='/export/serveraid_vol0/ROMS_HOME/Roms_tools/DATA_PACIFIC/ORCA05_clim/' |
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80 | datafile=[Dir_Data,'ORCA05_monthly_clim.cdf']; |
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81 | % |
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82 | % |
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83 | % |
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84 | %%%%%%%%%%%%%%%%%%% END USERS DEFINED VARIABLES %%%%%%%%%%%%%%%%%%%%%%% |
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85 | % |
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86 | % Title |
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87 | % |
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88 | disp(' ') |
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89 | disp([' Making the clim: ',clmname]) |
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90 | disp(' ') |
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91 | disp([' Title: ',title]) |
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92 | % |
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93 | % Read in the grid |
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94 | % |
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95 | disp(' ') |
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96 | disp(' Read in the grid...') |
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97 | nc=netcdf(grdname); |
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98 | Lp=length(nc('xi_rho')); |
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99 | Mp=length(nc('eta_rho')); |
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100 | hmax=max(max(nc{'h'}(:))); |
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101 | result=close(nc); |
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102 | % |
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103 | % Create the climatology file |
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104 | % |
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105 | if (makeclim) |
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106 | disp(' ') |
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107 | disp(' Create the climatology file.barotropic_currents..') |
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108 | create_climfile(clmname,grdname,title,... |
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109 | theta_s,theta_b,hc,N,... |
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110 | time,cycle,'clobber'); |
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111 | end |
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112 | % |
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113 | % Create the OA file |
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114 | % |
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115 | if (makeoa) |
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116 | disp(' ') |
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117 | disp(' Create the OA file...') |
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118 | nc=netcdf(datafile); |
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119 | Z=nc{'Z'}(:); |
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120 | close(nc) |
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121 | create_oafile(oaname,grdname,title,Z,... |
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122 | time,cycle,'clobber'); |
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123 | % |
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124 | % Horizontal extrapolations |
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125 | % |
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126 | disp(' ') |
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127 | disp(' Horizontal interpolations') |
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128 | disp(' ') |
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129 | disp(' Temperature...') |
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130 | int_data_orca(oaname,datafile,'temp','lon_rho','lat_rho','TEMP','lonT','latT',1); |
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131 | disp(' ') |
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132 | disp(' Salinity...') |
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133 | int_data_orca(oaname,datafile,'salt','lon_rho','lat_rho','SALT','lonT','latT',1); |
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134 | disp(' ') |
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135 | disp(' U...') |
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136 | int_data_orca(oaname,datafile,'u','lon_u','lat_u','U','lonU','latT',1); |
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137 | disp(' ') |
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138 | disp(' V...') |
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139 | int_data_orca(oaname,datafile,'v','lon_v','lat_v','V','lonT','latV',1); |
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140 | disp(' ') |
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141 | disp(' ZETA...') |
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142 | int_data_orca(oaname,datafile,'zeta','lon_rho','lat_rho','SSH','lonT','latT',0); |
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143 | |
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144 | ncoa=netcdf(oaname,'write'); |
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145 | ncoa{'ssh'}(:,:,:)=ncoa{'zeta'}(:,:,:); |
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146 | close(ncoa) |
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147 | end |
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148 | % |
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149 | % Vertical interpolations |
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150 | % |
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151 | if (makeclim) |
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152 | disp(' ') |
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153 | disp(' Vertical interpolations') |
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154 | disp(' ') |
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155 | disp(' Temperature...') |
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156 | vinterp_clm(clmname,grdname,oaname,'temp','tclm_time','Z',0,'r'); |
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157 | disp(' ') |
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158 | disp(' Salinity...') |
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159 | vinterp_clm(clmname,grdname,oaname,'salt','sclm_time','Z',0,'r'); |
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160 | disp(' ') |
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161 | disp(' U...') |
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162 | vinterp_clm(clmname,grdname,oaname,'u','uclm_time','Z',0,'u'); |
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163 | disp(' ') |
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164 | disp(' V...') |
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165 | vinterp_clm(clmname,grdname,oaname,'v','vclm_time','Z',0,'v'); |
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166 | disp(' ') |
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167 | disp(' ZETA...') |
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168 | rem_avg_zeta(clmname,grdname,oaname) |
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169 | disp(' ') |
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170 | disp(' UBAR & VBAR...') |
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171 | barotropic_currents(clmname,grdname,obc) |
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172 | end |
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173 | % |
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174 | % Initial file |
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175 | % |
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176 | if (makeini) |
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177 | disp(' ') |
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178 | disp(' Initial') |
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179 | create_inifile(ininame,grdname,title,... |
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180 | theta_s,theta_b,hc,N,... |
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181 | tini,'clobber'); |
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182 | ncini=netcdf(ininame,'write'); |
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183 | ncclm=netcdf(clmname); |
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184 | |
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185 | tindex=find(time==tini) |
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186 | if isempty(tindex), |
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187 | disp('Error : Indice for tini is not found, chek') ; |
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188 | end |
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189 | disp(' ') |
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190 | disp(' Temperature...') |
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191 | ncini{'temp'}(1,:,:,:)=ncclm{'temp'}(tindex,:,:,:); |
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192 | disp(' ') |
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193 | disp(' Salinity ...') |
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194 | ncini{'salt'}(1,:,:,:)=ncclm{'salt'}(tindex,:,:,:); |
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195 | disp(' ') |
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196 | disp(' U ...') |
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197 | ncini{'u'}(1,:,:,:)=ncclm{'u'}(tindex,:,:,:); |
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198 | disp(' ') |
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199 | disp(' V ...') |
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200 | ncini{'v'}(1,:,:,:)=ncclm{'v'}(tindex,:,:,:); |
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201 | disp(' ') |
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202 | disp(' UBAR & VBAR...') |
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203 | ncini{'ubar'}(1,:,:)=ncclm{'ubar'}(tindex,:,:); |
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204 | ncini{'vbar'}(1,:,:)=ncclm{'vbar'}(tindex,:,:); |
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205 | ncini{'vbar'}(1,5,5) |
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206 | disp(' ') |
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207 | disp(' ZETA...') |
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208 | ncini{'zeta'}(1,:,:)=ncclm{'zeta'}(tindex,:,:); |
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209 | ncini{'zeta'}(1,5,5) |
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210 | close(ncini); |
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211 | close(ncclm); |
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212 | end |
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213 | % |
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214 | % Make a few plots |
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215 | % |
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216 | disp(' ') |
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217 | disp(' Make a few plots...') |
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218 | test_clim(clmname,grdname,'temp',1) |
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219 | figure |
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220 | test_clim(clmname,grdname,'salt',1) |
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221 | figure |
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222 | test_clim(clmname,grdname,'temp',6) |
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223 | figure |
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224 | test_clim(clmname,grdname,'salt',6) |
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225 | % |
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226 | % End |
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227 | % |
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228 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
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