source: branches/bibliolocean/src/genbib.sh @ 156

#! /bin/sh -x
#+
#
# =========
# genbib.sh
# =========
#
# SYNOPSIS
# ========
#
# ``./genbib.sh``
#
# DESCRIPTION
# ===========
#
#
# TODO
# ====
#
# pb avec l'apostrophe dans les noms d'auteurs avec bibtool
#
# find missing hal/tel reference with bibtool
#
# produce HTML files by year
#
# good looking of \delta on jabref outputs
#
# 180 et 13C sideupper
#
# check for all chemical and physical expressions
#
# add a test on unescaped ampersand
#
# a solution for symbols :
# bibtex2html --no-abstract --no-keywords --title "Bibliographie du LOCEAN" --footer "$(date)" --style "alpha" --use-keys --raw-url  ~/locean/hal/gtbiblio/biblioref.bib
#
# Pour récupérer tous les bibtexkey dans le html produit ::
#
#  $ grep ">bib<" biblioref.html | sed -e "s/.*#//" -e "s/\">.*$//"  > list1
#
# Pour récupérer tous les  bibtexkey dans le fichier original::
#
#   $ grep "@.*{" ../data/biblioref.bib | sed -e "/PREAM/d" -e "s/.*{//" -e "s/,$//" > list2
#
# Faire la différence::
#
#  $ sdiff list1 list2
#
# vérifier que les mois sont dans la liste
# locale -k abmon | tr [:upper:] [:lower:]
#
# changer le titre des pages HTML
#
# contrôler le vocabulaire des champs
# pour avoir la liste des mots utilisés ::
#
#  $  grep "=" biblioref.bib | awk -F = '{print $1}' | sed -e "s/ //g" | sort -u
#
# pour voir nom/prénom dans la version bibtex (seulemen pour l'oeil ++)::
#
#   $ grep "author" biblioref.bib | sed -e "s/author = {//" -e "s/},$//" |  awk -F " and" '{print $NF}' | sort -u | more
#
# Pour corriger la version docbook : remplacer lastname par surname, ajouter la balise debut <bibliography>,
# remplacer authorgroup dans la doctype par bibliography
#
# Pour voir les nom_prenom à patir de la version docbook ::
#
#  $ xml sel -t -m "//author" -v "concat(surname,' ',firstname)" -n /usr/work/incas/fplod/public_html/gtbiblio/all.docbook.jabref.xml | sort -u |more
#
# ou sur mac lion::
#
#  $ xmlstarlet sel -t -m "//author" -v "concat(surname,' ',firstname)" -n /tmp/fplod/public_html/gtbiblio/all.docbook.jabref.xml | sort -u |more
#
# EVOLUTIONS
# ==========
#
# - fplod 20120322
#
#   * add authors mainly from Bondy
#
# - fplod 20120223
#
#   * apply locean_tablerefsabsbibsort format for author (was locean_listrefs)
#
# - fplod 20120217
#
#   * ajout des auteurs de l'équipe surf
#
# - fplod 20120131
#
#   * les non publiés sont mainteant tout simplement des @unpublished
#     (plus de ruse avec year={xxxx, *})
#
# - fplod 20111010T073116Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * création page thesesud
#
# - fplod 20110610T100740Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * suppression upmc et labex
#   * ajout création page these
#
# - fplod 20110511T155810Z cratos.locean-ipsl.upmc.fr (Linux)
#
#   * replace /tmp by /usr/work/incas/
#
# - fplod 20110427T110808Z cratos.locean-ipsl.upmc.fr (Linux)
#
#   * la production pdflaetx+bibtex ne fonctionne plus sur aedon.
#     malgrè le changement d'installation (port vs fink) rien à faire !
#     donc - et ça va plutôt dans le bon sens - machine de référence = cratos.
#
# - fplod 20110301T091253Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * trying to make it run with bibtool 2.51 on zeus
#
# - fplod 20110228T162021Z cratos.locean-ipsl.upmc.fr (Linux)
#
#   * trying to make it run with bibtool 2.51 on cratos (vs 2.48 sur aedon)
#
# - fplod 20101109T144613Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add for upmc 2009-2010
#     ++ suppression in revision, submitted and so on
#     ++ correction $...$ et Monaco C. L. en Lo Monaco C.
#     ++ je ne sais pas pourquoi rien n'apparait en ouvrant le RTF produit avec #        TextEdit alors que l'on voit qqe chose en l'ouvrant directement avec
#        OpenOffice.
#
# - fplod 20101108T103903Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * correction of years selection for 2007-2010
#     because match year 2000.'select={year "20[01][0789].*"}'
#
#   * add for labex a selection of articles published in 2009.
#     ++ suppression in revision, submitted and so on
#     ++ auteurs labo (ipsl) en gras dans document word
#     ++ correction $...$ et Monaco C. L. en Lo Monaco C.
#
# - fplod 20101013T090448Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add specific RTF output for 2007-2010 articles (labex2007_2010.rtf)
#
# - fplod 20100430T131122Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * jabref 2.5 -> 2.6
#
# - fplod 20100127T084405Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add generation of HTML files pages by (affectation,year) using bibtool
#
# - fplod 20091120T140131Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * fix latex pb : PDF production is now possible
#   * detection of [delta]
#     nb: remplacement de [delta] par \delta ok pour la production de PDF avec
#     pdflatex mais pas ok pour la production d'HTML avec jabref
#
# - fplod 20091117T093404Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add test if bibtool available
#
# - fplod 20091023T125342Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add test if existing {\ : available feature in latex but confusing
#     for author search using bibtool select
#   * add test if , in author field
#
# - fplod 20091021T153653Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * outputs HTML, PDF and RTF in dirwww
#
# - fplod 20091020T134644Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * usage of bibtool to find years list
#   * usage of bibtool to produce bibtex files by year
#   * usage of bibtool to produce bibtex files by team (instead of
#     biblio_split.sh + grep)
#
# - fplod 20091020T092945Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * avoid diacritical and punctuation in filename (list_team_title s
#     list_team_grep)
#
# - fplod 20091016T145245Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * use locean_listrefs format for every team
#
# - fplod 2009-08-21T08:20:29Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add locean_listrefs format
#
# - fplod 2009-08-19T15:48:01Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add simplehtml format
#
# - fplod 2009-08-17T07:56:02Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add alpha style
#
# - fplod 2009-08-14T15:39:44Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * use -p option to add customized exports format
#   * add loop one latex biblio style
#
# - fplod 2009-08-10T17:08:07Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * test with jabref 2.5
#   * add docbook production
#
# - fplod 2009-07-07T10:17:37Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * loop on html formats
#
# - fplod 2009-07-03T08:01:21Z aedon.locean-ipsl.upmc.fr (Darwin)
#
#   * add latex+bibtex processing
#
# TODO
# ====
#
# ++ doublons
#
# jabref.preferences.xml : cleaning
#
# jabref doesn't handle multiple url
#
# could not encode : still some trouble with degre sign
#
# installation de bibtool sur zeus
#
set -u
command=$(basename ${0})
#
jabref_version="2.6"
#
jabref_dir="/usr/home/incas/francoise/jabref-${jabref_version}_$(hostname)/"
case "$(uname -s)" in
   Darwin)
      jabref_dir=${jabref_dir}"JabRef.app/Contents/Resources/Java/"
   ;;
   Linux)
   ;;
   *)
      echo "${command} : eee : unknown system $(uname -s)"
   ;;
esac
#
system=$(uname)
case "${system}" in
   AIX|IRIX64)
      echo "${command} : www : no specific posix checking"
   ;;
   *)
      set -o posix
   ;;
esac
#
#
log_date=$(date -u +"%Y%m%dT%H%M%SZ")
log=/tmp/$(basename ${command} .sh).log.${log_date}
#
usage=" Usage : ${command}"
#
# test if bibtool available
tool=bibtool
type ${tool} 1> /dev/null 2>&1
status=${?}
if [ ${status} -ne 0 ]
then
   echo "${command} : eee : ${tool} unavailable" >&2
   exit 1
fi
unset tool
unset status
#
# default
# n.a.
#
hostname=$(hostname)
case ${hostname} in
   cratos)
      tmpdir=/usr/work/incas/${LOGNAME}/gtbiblio
      dirwww=/usr/work/incas/${LOGNAME}/public_html/gtbiblio/
   ;;
   *)
      tmpdir=/tmp/${LOGNAME}/gtbiblio
      dirwww=/tmp/${LOGNAME}/public_html/gtbiblio/
   ;;
esac
rm -rf ${tmpdir} 2> /dev/null
mkdir -p ${tmpdir}
rm -rf ${dirwww} 2> /dev/null
mkdir -p ${dirwww}
#
# define team for :
# - search in bibtex file (in loceanteam field)
# - give a element of HTML filename (no diacritical and no punctation)
iteam=1
list_team_bibtool[${iteam}]="phybiocar"
list_team_title[${iteam}]="phybiocar"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="surf"
list_team_title[${iteam}]="surf"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="varclim"
list_team_title[${iteam}]="varclim"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="austral-boréal"
list_team_title[${iteam}]="austral-boreal"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="bio&pal"
list_team_title[${iteam}]="bio_et_pal"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="paléotropique"
list_team_title[${iteam}]="paleotropique"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="snapo"
list_team_title[${iteam}]="snapo"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="dycos"
list_team_title[${iteam}]="dycos"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="prodyam"
list_team_title[${iteam}]="prodyam"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="incas"
list_team_title[${iteam}]="incas"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="mmsa"
list_team_title[${iteam}]="mmsa"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="ditm"
list_team_title[${iteam}]="ditm"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="nemo"
list_team_title[${iteam}]="nemo"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="paleoproxus"
list_team_title[${iteam}]="paleoproxus"
iteam=$(( ${iteam} + 1))
list_team_bibtool[${iteam}]="vartrop"
list_team_title[${iteam}]="vartrop"
#
# define affectation for :
# - search in bibtex file (in loceanaffectation field)
# - give a element of HTML filename (no diacritical and no punctation)
iaffectation=1
list_affectation_bibtool[${iaffectation}]="mnhn"
list_affectation_title[${iaffectation}]="mnhn"
iaffectation=$(( ${iaffectation} + 1))
list_affectation_bibtool[${iaffectation}]="cnrs"
list_affectation_title[${iaffectation}]="cnrs"
iaffectation=$(( ${iaffectation} + 1))
list_affectation_bibtool[${iaffectation}]="ird"
list_affectation_title[${iaffectation}]="ird"
iaffectation=$(( ${iaffectation} + 1))
list_affectation_bibtool[${iaffectation}]="upmc"
list_affectation_title[${iaffectation}]="upmc"
iaffectation=$(( ${iaffectation} + 1))
list_affectation_bibtool[${iaffectation}]="uvsq"
list_affectation_title[${iaffectation}]="uvsq"
#
# define bibliography reference file
biblioref_orig=../data/biblioref.bib #++ parameter
biblioref=${tmpdir}/all.bib
cp ${biblioref_orig} ${biblioref}
#
#
# test if "[delta]"
# if so, exit with error
list_bad_delta=""
list_bad_delta=$(grep -n "\[delta\]" ${biblioref})
if [ "${list_bad_delta}" != "" ]
then
   echo "${command} : eee : replace [delta] by \\delta (and check formula) in ${list_bad_delta}"
   exit 1
fi
#
# test if "{\" like {\'e}
# if so, exit with error
list_comma_author=""
#++grep -n "author.* =.*{.*,.*}," ${biblioref} | awk -F":" '{print $1}'
list_comma_author=$(grep -n 'author.* =.*{.*,.*},' ${biblioref})
if [ "${list_comma_author}" != "" ]
then
   echo "${command} : eee : suppress , in author field in ${list_comma_author}"
   exit 1
fi
#
# test if "{\" like {\'e}
# if so, exit with error
list_backslash_after=""
#++ pb regexp list_backslash_after=$(grep -n "\{\\" ${biblioref})
#++grep -n '{\\' ${biblioref}
if [ "${list_backslash_after}" != "" ]
then
   echo "${command} : eee : suppress \"{\\\" in ${list_backslash_after}"
   exit 1
fi
unset list_backslash_after

# test if " }"
# if so, exit with error
list_blank_before=""
list_blank_before=$(grep -n " \}" ${biblioref})
if [ "${list_blank_before}" != "" ]
then
   echo "${command} : eee : suppress \" }\" in ${list_blank_before}"
   exit 1
fi
unset list_blank_before

# test if "{ "
# if so, exit with error
list_blank_after=""
list_blank_after=$(grep -n "\{ " ${biblioref})
if [ "${list_blank_after}" != "" ]
then
   echo "${command} : eee : suppress \"{ \" in ${list_blank_after}"
   exit 1
fi
unset list_blank_after

# test if doi in url field (because of HAL bibtex output)
# if so, exit with error
list_doi_in_url=""
list_doi_in_url=$(grep -n "url = {dx" ${biblioref})
if [ "${list_doi_in_url}" != "" ]
then
   echo "${command} : eee : suppress doi from url fied in ${list_doi_in_url}"
   exit 1
fi
unset list_doi_in_url
#
# test if { or } in doi field (because of HAL bibtex output)
# if so, exit with error
list_bad_doi=""
list_bad_doi=$(grep -n "doi = {.*{.*}.*}" ${biblioref})
if [ "${list_bad_doi}" != "" ]
then
   echo "${command} : eee : suppress \{ or \} from doi fied in ${list_bad_doi}"
   exit 1
fi
unset list_bad_doi

# test if doi does'nt start with 10
# ++ je ne sais pas rédiger cette contrainte en grep
# if so, exit with error
list_bad_doi=""
list_bad_doi=$(grep "doi = {.*}" ${biblioref} | grep -v "doi = {10")
if [ "${list_bad_doi}" != "" ]
then
   echo "${command} : eee : find and modify ${list_bad_doi} suppress in ${biblioref}"
   exit 1
fi
unset list_bad_doi

# test if { or } in pages field (because of HAL bibtex output)
# if so, exit with error
list_bad_pages=""
list_bad_pages=$(grep -n "pages={.*{.*}.*}" ${biblioref})
if [ "${list_bad_pages}" != "" ]
then
   echo "${command} : eee : suppress \{ or \} from pages field in ${list_bad_pages}"
   #++exit 1
fi
unset list_bad_pages

# test if semi-cadratin++ translation in pages field (because of HAL bibtex output)
# if so, exit with error
   #++echo "${command} : eee : ++ suppress ++ semi-cadratin from pages fied in ${list_bad_pages}"
   #++exit 1

# artificial header of jabref file to enforce encoding
{
echo "% This file was articifialy created for JabRef ${jabref_version}."
echo "% Encoding: ISO8859_1"
echo " "
} > ${tmpdir}/header_jabref
#
#list_style="amsalpha plain alpha"
list_style="plain" #+++
for style in ${list_style}
do
   rm ${dirwww}/$(basename ${biblioref}.${style}.log .log).* 2> /dev/null
   # generation of latex file
   cat << EOF > ${biblioref}.${style}.tex
\documentclass[a4paper]{article}
%++\usepackage[frenchb]{babel}
\usepackage[latin1]{inputenc}
\begin{document}
% force to include all entry of the bibliography
\nocite{*}

% bibliography
\bibliographystyle{${style}}

\bibliography{${biblioref}}
\end{document}
EOF
   #
   # processing bibliography with pdflatex (${dirwww}/${biblioref}.${style}.pdf)
   rm ${dirwww}/$(basename ${biblioref}.${style}.log .log).* 2> /dev/null
   pdflatex -output-directory ${dirwww} ${biblioref}.${style}.tex
   bibtex ${dirwww}/$(basename ${biblioref}.${style})
   #++ warnings
   pdflatex -output-directory ${dirwww} ${biblioref}.${style}.tex
   pdflatex -output-directory ${dirwww} ${biblioref}.${style}.tex
   #
   # remove temporary latex files
   rm ${dirwww}/$(basename ${biblioref}.${style}.bbl) ${dirwww}/$(basename ${biblioref}.${style}.blg) ${dirwww}/$(basename ${biblioref}.${style}.log) ${dirwww}/$(basename ${biblioref}.${style}.aux) 2> /dev/null
   #
   #++rm ${biblioref}.${style}.tex 2> /dev/null
done

echo "fin 1re passe latex"
read a
# pour vérifier que j'ai bien tout mes styles d'exportation
# pour mémoire
#java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
#-p ./jabref.preferences.xml -h

# processing on the whole bibliography reference file
output_title=all
# generation one RTF file style harvard
rm ${biblioref}.harvard.jabref.rtf 2> /dev/null
java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
-p ./jabref.preferences.xml \
--output ${dirwww}/${output_title}.harvard.jabref.rtf,harvard \
${biblioref}
echo "fin rtf all"
#
# theses
bibtool -- 'select{@phdthesis}'  ${biblioref} -o ${tmpdir}/tmp1.bib
bibtool -- 'select={type ".*doctorat.*"}' -- 'sort.format={%d(year)%N(author)}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp2.bib
rm ${tmpdir}/tmp1.bib
java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
-p ./jabref.preferences.xml \
--output ${dirwww}/these.html,locean_tablerefsabsbibsort \
${tmpdir}/tmp2.bib
rm ${tmpdir}/tmp2.bib
echo "fin these"
read a
#
# page thesesud
bibtool -- 'select{@phdthesis}'  ${biblioref} -o ${tmpdir}/tmp1.bib
bibtool -- 'select={type ".*doctorat.*"}' -- 'sort.format={%d(year)%N(author)}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp2.bib
bibtool -- 'select={ird_thesesud "oui"}' ${tmpdir}/tmp2.bib \
-o ${tmpdir}/tmp3.bib
rm ${tmpdir}/tmp1.bib ${tmpdir}/tmp2.bib
java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
-p ./jabref.preferences.xml \
--output ${dirwww}/thesesud.html,locean_tablerefsabsbibsort \
${tmpdir}/tmp3.bib
#++rm ${tmpdir}/tmp3.bib
echo "fin thesesud"
read a

# find the years list
# . select all the references with no "," in year field
bibtool -- 'select.non={year ","}' ${biblioref} -o ${tmpdir}/tmp.bib
# . extract year field
list_year=$(grep "^  year               =" ${tmpdir}/tmp.bib | sort -u | sed -e "s/^  year              = {//" -e "s/},//" -e "s/}//")
read a
rm ${tmpdir}/tmp.bib
#
# write a bibtex file for each year of the list
for iyear in ${list_year}
do
   # select year
   bibtool_command="bibtool -- 'select={year \"${iyear}\"}' ${biblioref} -o ${tmpdir}/tmp1.bib"
   eval ${bibtool_command}
   # remove unpublished reference
   bibtool -- 'select.non={@unpublished}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp2.bib
   cat ${tmpdir}/header_jabref ${tmpdir}/tmp2.bib > ${tmpdir}/tmp_${iyear}.bib
   rm ${tmpdir}/tmp1.bib
   rm ${tmpdir}/tmp2.bib
done
#++ on ne fait rien de ${tmpdir}/tmp_${iyear}.bib
#
# write a bibtex file for unpublished work
bibtool -- 'select={@unpublished}' ${biblioref} -o ${tmpdir}/tmp2.bib
cat ${tmpdir}/header_jabref ${tmpdir}/tmp2.bib > ${tmpdir}/tmp_unpublished.bib
rm ${tmpdir}/tmp2.bib
#++ on ne fait rien de ${tmpdir}/tmp_unpublished.bib
#
list_format="html simplehtml tablerefs locean_tablerefs locean_tablerefsabsbibsort locean_listrefs"
#+++list_format="" #+++
for format in ${list_format}
do
   echo "format export jabref ${format}"
   # generation one HTML file style ${format}
   rm ${biblioref}.${format}.jabref.html 2> /dev/null
   java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
   -p ./jabref.preferences.xml \
   --output ${dirwww}/${output_title}.${format}.jabref.html,${format} \
   ${biblioref}
   jabref_status=${?}
   if [ ${jabref_status} -ne 0 ]
   then
      echo "${command} : eee : pb with jabref export ${format}"
      exit 1
   fi
done

# generation of DocBook
format=docbook
rm ${biblioref}.${format}.jabref.html 2> /dev/null
java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
-p ./jabref.preferences.xml \
--output ${dirwww}/${output_title}.${format}.jabref.xml,${format} \
${biblioref}
jabref_status=${?}
if [ ${jabref_status} -ne 0 ]
then
   echo "${command} : eee : pb with jabref export ${format}"
   exit 1
fi

# loop on teams to build bibliography reference file
iteam=1
nbteam=${#list_team_bibtool[@]}
#+++nbteam=0
while [ ${iteam} -le ${nbteam} ]
do
   echo "team title = ${list_team_title[iteam]}"
   echo "team grep = ${list_team_bibtool[iteam]}"
   biblioref_team=${tmpdir}/${list_team_title[iteam]}.bib
   bibtool_command="bibtool -- 'select={loceanteam \"${list_team_bibtool[iteam]}\"}' ${biblioref} -o ${tmpdir}/tmp1.bib"
   eval ${bibtool_command}
   # test if no file found ++
   cat ${tmpdir}/header_jabref ${tmpdir}/tmp1.bib > ${biblioref_team}
   format=locean_listrefs
   # generation one HTML file style ${format}
   rm ${biblioref}.${format}.jabref.html 2> /dev/null
   java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
      -p ./jabref.preferences.xml \
      --output ${dirwww}/${list_team_title[iteam]}.${format}.jabref.html,${format} \
      ${biblioref_team}
   jabref_status=${?}
   if [ ${jabref_status} -ne 0 ]
   then
      echo "${command} : eee : pb with jabref export ${format}"
      exit 1
   fi
#++ else
#++ echo "${command} : iii : no reference for team ${team}"
#++ fi
   iteam=$(( ${iteam} + 1 ))
done

# loop on affectations to build bibliography reference file
format=locean_listrefs
iaffectation=1
nbaffectation=${#list_affectation_bibtool[@]}
while [ ${iaffectation} -le ${nbaffectation} ]
do
   echo "affectation title = ${list_affectation_title[iaffectation]}"
   echo "affectation grep = ${list_affectation_bibtool[iaffectation]}"
   bibtool_command="bibtool -- 'select={loceanaffectation \"${list_affectation_bibtool[iaffectation]}\"}' ${biblioref} -o ${tmpdir}/tmp1.bib"
   eval ${bibtool_command}
   # test if no file found ++
   # select all the references of unpublished work
   bibtool -- 'select={@unpublished}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp2.bib
   biblioref_affectation_unpublished=${tmpdir}/${list_affectation_title[iaffectation]}_${iyear}.bib
   cat ${tmpdir}/header_jabref ${tmpdir}/tmp2.bib > ${biblioref_affectation_unpublished}
   # generation one HTML file style ${format}
   rm ${biblioref}.${format}.jabref.html 2> /dev/null
   java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
        -p ./jabref.preferences.xml \
        --output ${dirwww}/${list_affectation_title[iaffectation]}_unpublished.${format}.jabref.html,${format} \
        ${biblioref_affectation_unpublished}
   jabref_status=${?}
   if [ ${jabref_status} -ne 0 ]
   then
      echo "${command} : eee : pb with jabref export ${format}"
      exit 1
   fi
   # find the years list
   # . select all the references of published work
   bibtool -- 'select.non={@unpublished}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp2.bib
   # . extract year field
   list_year=$(grep "^  year            =" ${tmpdir}/tmp2.bib | sed -e "s/^  year               = {//" -e "s/},//" -e "s/}$//" | sort -u)
   echo "list_years for ${list_affectation_title[iaffectation]} : ${list_year}"
   read a
   # write a bibtex file for each year of the list
   for iyear in ${list_year}
   do
      # select year
      bibtool_command="bibtool -- 'select={year \"${iyear}\"}' ${tmpdir}/tmp1.bib -o ${tmpdir}/tmp3.bib"
      eval ${bibtool_command}
      biblioref_affectation_year=${tmpdir}/${list_affectation_title[iaffectation]}_${iyear}.bib
      cat ${tmpdir}/header_jabref ${tmpdir}/tmp3.bib > ${biblioref_affectation_year}
      # generation one HTML file style ${format}
      rm ${biblioref}.${format}.jabref.html 2> /dev/null
      java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
         -p ./jabref.preferences.xml \
         --output ${dirwww}/${list_affectation_title[iaffectation]}_${iyear}.${format}.jabref.html,${format} \
         ${biblioref_affectation_year}
      jabref_status=${?}
      if [ ${jabref_status} -ne 0 ]
      then
         echo "${command} : eee : pb with jabref export ${format}"
         exit 1
      fi
      #++ else
      #++ echo "${command} : iii : no reference for affectation ${affectation}"
      #++ fi
   # end of loop on years
   done
   iaffectation=$(( ${iaffectation} + 1 ))
done

# define author for :
# - search in bibtex file (in author field)
# - give a element of HTML filename (no diacritical and no punctation)
iauthor=1
#
list_author_bibtool[${iauthor}]="{A}lban {L}azar"
list_author_title[${iauthor}]="Alban Lazar"
list_author_file[${iauthor}]="Lazar_alban"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}atthieu {L}engaigne"
list_author_title[${iauthor}]="Matthieu Lengaigne"
list_author_file[${iauthor}]="Lengaigne_matthieu"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}rançoise {P}insard"
list_author_title[${iauthor}]="Françoise Pinsard"
list_author_file[${iauthor}]="Pinsard_francoise"
# ++ python auteur="Francoise Pinsard"
# ++ python filename=string.split(auteur)[1] + "_" + string.lower(string.split(auteur)[0])
#
iauthor=$(( ${iauthor} + 1))
# pb avec l'apostrophe avec la ligne suivante dans bibtool
#++list_author_bibtool[${iauthor}]="{F}rancesco {d\'{O}vidio}"
list_author_bibtool[${iauthor}]="{O}vidio}"
list_author_title[${iauthor}]="Francesco d'Ovidio"
list_author_file[${iauthor}]="Dovidio_francesco"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}arina {L}évy"
list_author_title[${iauthor}]="Marina Lévy"
list_author_file[${iauthor}]="Levy_marina"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{N}icolas {M}etzl"
list_author_title[${iauthor}]="Nicolas Metzl"
list_author_file[${iauthor}]="Metzl_nicolas"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{L}aurence {E}ymard"
list_author_title[${iauthor}]="Laurence Eymard"
list_author_file[${iauthor}]="Eymard_laurence"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}acqueline {B}outin"
list_author_title[${iauthor}]="Jacqueline Boutin"
list_author_file[${iauthor}]="Boutin_jacqueline"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{V}incent {E}chevin"
list_author_title[${iauthor}]="Vincent Echevin"
list_author_file[${iauthor}]="Echevin_vincent"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}hristophe {E}. {M}enkès"
list_author_title[${iauthor}]="Christophe Menkès"
list_author_file[${iauthor}]="Menkes_christophe"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{G}urvan {M}adec"
list_author_title[${iauthor}]="Gurvan Madec"
list_author_file[${iauthor}]="Madec_gurvan"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}hristian {É}thé"
list_author_title[${iauthor}]="Christian Éthé"
list_author_file[${iauthor}]="Ethe_christian"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}lexis {C}haigneau"
list_author_title[${iauthor}]="Alexis Chaigneau"
list_author_file[${iauthor}]="Chaigneau_alexis"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}téphane {P}ous"
list_author_title[${iauthor}]="Stéphane Pous"
list_author_file[${iauthor}]="Pous_stephane"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{P}ascal {T}erray"
list_author_title[${iauthor}]="Pascal Terray"
list_author_file[${iauthor}]="Terray_pascal"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}rançois {C}olas"
list_author_title[${iauthor}]="François Colas"
list_author_file[${iauthor}]="Colas_francois"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}ébastien {M}asson"
list_author_title[${iauthor}]="Sébastien Masson"
list_author_file[${iauthor}]="Masson_sebastion"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}laire {L}évy"
list_author_title[${iauthor}]="Claire Lévy"
list_author_file[${iauthor}]="Levy_claire"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{R}achid {B}enshila"
list_author_title[${iauthor}]="Rachid Benshila"
list_author_file[${iauthor}]="Benshila_rachid"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}atherine {P}ierre"
list_author_title[${iauthor}]="Catherine Pierre"
list_author_file[${iauthor}]="Pierre_catherine"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{I}oanna {B}ouloubassi"
list_author_title[${iauthor}]="Ioanna Bouloubassi"
list_author_file[${iauthor}]="Bouloubassi_Ioanna"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}édric {C}otté"
list_author_title[${iauthor}]="Cédric Cotté"
list_author_file[${iauthor}]="Cotte_cedric"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}ean-{B}enoît {C}harrassin"
list_author_title[${iauthor}]="Jean-Benoit Charrassin"
list_author_file[${iauthor}]="Charrassin_jeanbenoit"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Y}ves {D}andonneau"
list_author_title[${iauthor}]="Yves Dandonneau"
list_author_file[${iauthor}]="Dandonneau_yves"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{L}iliane {M}erlivat"
list_author_title[${iauthor}]="Liliane Merlivat"
list_author_file[${iauthor}]="Merlivat_liliane"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{P}ascale {B}ouruet-{A}ubertot"
list_author_title[${iauthor}]="Pascale Bouruet-Aubertot"
list_author_file[${iauthor}]="Bouruetaubertot_pascale"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Y}annis {C}uypers"
list_author_title[${iauthor}]="Yannis Cuypers"
list_author_file[${iauthor}]="Cuypers_yannis"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}érôme {V}ialard"
list_author_title[${iauthor}]="Jérôme Vialard"
list_author_file[${iauthor}]="Vialard_jerome"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{N}athalie {L}efèvre"
list_author_title[${iauthor}]="Nathalie Lefèvre"
list_author_file[${iauthor}]="Lefevre_nathalie"
#
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}ylvie {T}hiria"
list_author_title[${iauthor}]="Sylvie Thiria"
list_author_file[${iauthor}]="Thiria_sylvie"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}ulien {B}rajard"
list_author_title[${iauthor}]="Julien Brajard"
list_author_file[${iauthor}]="Brajard_julien"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}arlos {M}ejia"
list_author_title[${iauthor}]="Carlos Mejia"
list_author_file[${iauthor}]="Mejia_carlos"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}ouad {B}adran"
list_author_title[${iauthor}]="Fouad Badran"
list_author_file[${iauthor}]="Badran_fouad"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Y}oung-{H}yang {P}ark"
list_author_title[${iauthor}]="Young-Hyang {P}ark"
list_author_file[${iauthor}]="Park_younghyang"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}uliette {M}ignot"
list_author_title[${iauthor}]="Juliette Mignot"
list_author_file[${iauthor}]="Mignot_juliette"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}yriam {K}hodri"
list_author_title[${iauthor}]="Myriam Khodri"
list_author_file[${iauthor}]="Khodri_myriam"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{H}ervé {{L}e {G}off}}"
list_author_title[${iauthor}]="Hervé Le Goff"
list_author_file[${iauthor}]="Legoff_herve"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}éline {R}idame"
list_author_title[${iauthor}]="Céline Ridame"
list_author_file[${iauthor}]="Ridame_celine"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{G}uillaume {M}assé"
list_author_title[${iauthor}]="Guillaume Massé"
list_author_file[${iauthor}]="Masse_guillaume"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}line {T}ribollet"
list_author_title[${iauthor}]="Aline Tribollet"
list_author_file[${iauthor}]="Tribollet_aline"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}lain {S}aliot"
list_author_title[${iauthor}]="Alain Saliot"
list_author_file[${iauthor}]="Saliot_alain"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{G}iovanni {A}loisi"
list_author_title[${iauthor}]="Giovanni Aloisi"
list_author_file[${iauthor}]="Aloisi_giovanni"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Ch}ristian {B}runet"
list_author_title[${iauthor}]="Christian Brunet"
list_author_file[${iauthor}]="Brunet_christian"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}abine {A}rnault"
list_author_title[${iauthor}]="Sabine Arnault"
list_author_file[${iauthor}]="Arnault_sabine"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}ean-{L}uc {M}élice"
list_author_title[${iauthor}]="Jean-Luc Mélice"
list_author_file[${iauthor}]="Melice_jeanluc"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Ch}ristophe {H}erbaut"
list_author_title[${iauthor}]="Christophe Herbaut"
list_author_file[${iauthor}]="Herbaut_christophe"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}arie-{N}oëlle {H}oussais"
list_author_title[${iauthor}]="Marie-Noëlle Houssais"
list_author_file[${iauthor}]="Houssais_marienoelle"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{E}mmanuelle {S}ultan"
list_author_title[${iauthor}]="Emmanuelle Sultan"
list_author_file[${iauthor}]="Sultan_emmanuelle"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{B}enjamin {S}ultan"
list_author_title[${iauthor}]="Benjamin Sultan"
list_author_file[${iauthor}]="Sultan_benjamin"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{Y}annis {C}uypers"
list_author_title[${iauthor}]="Yannis Cuypers"
list_author_file[${iauthor}]="Cuypers_yannis"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{L}aurent {M}ortier"
list_author_title[${iauthor}]="Laurent Mortier"
list_author_file[${iauthor}]="Mortier_laurent"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{P}ascale {B}ouruet-{A}ubertot"
list_author_title[${iauthor}]="Pascale Bouruet-Aubertot"
list_author_file[${iauthor}]="Bouruet-Aubertot_pascale"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}ichel {C}répon"
list_author_title[${iauthor}]="Michel Crépon"
list_author_file[${iauthor}]="Crepon_michel"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{N}icolas {M}artin"
list_author_title[${iauthor}]="Nicolas Martin"
list_author_file[${iauthor}]="Martin_nicolas"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}drien {M}artin"
list_author_title[${iauthor}]="Adrien Martin"
list_author_file[${iauthor}]="Martin_adrien"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}rédéric {V}ivier"
list_author_title[${iauthor}]="Fréderic Vivier"
list_author_file[${iauthor}]="Vivier_frederic"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}imon {M}orisset"
list_author_title[${iauthor}]="Simon Morisset"
list_author_file[${iauthor}]="Morisset_simon"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}ntonio {L}ourenço"
list_author_title[${iauthor}]="Antonio Lourenço"
list_author_file[${iauthor}]="Lourenco_antonio"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{G}illes {R}everdin"
list_author_title[${iauthor}]="Gilles Reverdin"
list_author_file[${iauthor}]="Reverdin_gilles"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{X}avier {C}apet"
list_author_title[${iauthor}]="Xavier Capet"
list_author_file[${iauthor}]="Capet_xavier"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{P}ierre {T}estor"
list_author_title[${iauthor}]="Pierre Testor"
list_author_file[${iauthor}]="Testor_pierre"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{L}uc {O}rtlieb"
list_author_title[${iauthor}]="Luc Ortlieb"
list_author_file[${iauthor}]="Ortlieb_luc"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{B}runo {T}urcq"
list_author_title[${iauthor}]="Bruno Turcq"
list_author_file[${iauthor}]="Turcq_bruno"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}andrine {C}aquineau"
list_author_title[${iauthor}]="Sandrine Caquineau"
list_author_file[${iauthor}]="Caquineau_sandrine"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{C}laire {E}. {L}azareth"
list_author_title[${iauthor}]="Claire Lazareth"
list_author_file[${iauthor}]="Lazareth_claire"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}lorence {{L}e {C}ornec}"
list_author_title[$iauthor]="Florence Le Cornec"
list_author_file[${iauthor}]="Lecornec_florence"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{M}agloire {M}andeng-{Y}ogo"
list_author_title[$iauthor]="Magloire Mandeng-Yogo"
list_author_file[${iauthor}]="Mandengyogo_magloire"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}nne-{M}arie {S}émah"
list_author_title[$iauthor]="Anne-Marie Sémah"
list_author_file[${iauthor}]="Semah_annemarie"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{H}ugues {B}oucher"
list_author_title[$iauthor]="Hugues Boucher"
list_author_file[${iauthor}]="Boucher_hugues"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{A}bdelfettah {S}ifeddine"
list_author_title[$iauthor]="Abdelfettah Sifeddine"
list_author_file[${iauthor}]="Sifeddine_abdelfettah"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{D}enis {W}irrmann"
list_author_title[$iauthor]="Denis Wirrmann"
list_author_file[${iauthor}]="Wirrmann_denis"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{F}ethye {C}etin"
list_author_title[$iauthor]="Fethye Cetin"
list_author_file[${iauthor}]="Cetin_fethye"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{S}abine {F}évrier"
list_author_title[${iauthor}]="Sabine Février"
list_author_file[${iauthor}]="Fevrier_sabine"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{J}érôme {S}irven"
list_author_title[${iauthor}]="Jérôme Sirven"
list_author_file[${iauthor}]="Sirven_jerome"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{G}uillaume {G}astineau"
list_author_title[${iauthor}]="Guillaume Gastineau"
list_author_file[${iauthor}]="Gastineau_guillaume"
#
iauthor=$(( ${iauthor} + 1))
list_author_bibtool[${iauthor}]="{É}ric {G}uilyardi"
list_author_title[${iauthor}]="Éric Guilyardi"
list_author_file[${iauthor}]="Guilyardi_eric"
#
# loop on authors to build bibliography reference file
iauthor=1
nbauthor=${#list_author_bibtool[@]}
#++nbauthor=0 #+++
while [ ${iauthor} -le ${nbauthor} ]
do
   rm ${tmpdir}/tmp1.bib 2> /dev/null
   echo "author title = ${list_author_title[iauthor]}"
   echo "author grep = ${list_author_bibtool[iauthor]}"
   biblioref_author=${tmpdir}/${list_author_file[iauthor]}.bib
   bibtool_command="bibtool -- 'select={author \"${list_author_bibtool[iauthor]}\"}' ${biblioref} -o ${tmpdir}/tmp1.bib"
   eval ${bibtool_command}
   # test if no file found ++
   cat ${tmpdir}/header_jabref ${tmpdir}/tmp1.bib > ${biblioref_author}
   format=locean_tablerefsabsbibsort
   # generation one HTML file style ${format}
   rm ${biblioref}.${format}.jabref.html 2> /dev/null
   java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
      -p ./jabref.preferences.xml \
      --output ${dirwww}/${list_author_file[iauthor]}.${format}.jabref.html,${format} \
      ${biblioref_author}
   jabref_status=${?}
   if [ ${jabref_status} -ne 0 ]
   then
      echo "${command} : eee : pb with jabref export ${format}"
      exit 1
   fi
#++ else
#++ echo "${command} : iii : no reference for author ${team}"
#++ fi
   iauthor=$(( ${iauthor} + 1 ))
done
echo "fin auteurs"
read a

#++ process html transformation of DocBook file ++

# is there any reference to be add to HAL
biblioref_hal=$(grep -c "url = {http://hal.archives-ouvertes.fr/hal" ${biblioref} | grep ":0" | awk -F: '{print $1}')
if [ "${biblioref_hal}" != " " ]
then
   #++ more than 30 entries
   cat ${tmpdir}/header_jabref ${biblioref_hal} > ${biblioref}_hal.bib
   #
   # generation one XML file style prehal

   rm ${biblioref}.1.jabref.xml 2> /dev/null
   java -jar ${jabref_dir}/JabRef-${jabref_version}.jar -n true \
      -p ./jabref.preferences.xml \
      --output ${tmpdir}/${output_title}.1.jabref.xml,prehal \
      ${biblioref}_hal.bib
fi

#++rm ${biblioref} 2> /dev/null
#++rm ${biblioref}_hal 2> /dev/null
#++rm ${tmpdir}/header_jabref 2> /dev/null

exit 0