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Job to launch LMDZ with TotalView?

Here is a simple Job to debug LMDZ with TotalView?.

You need to adapt the parameters of -n, -c and OMP_NUM_THREADS. Ask Yann Meurdesoif.

#!/bin/ksh                                                                                                                                                                                                                                   
######################
## CURIE   TGCC/CEA ##
######################
#MSUB -r SWZ_LMDZ1TS
#MSUB -o Script_Output_TEST.000001    # standard output
#MSUB -e Script_Output_TEST.000001    #error output
#MSUB -eo
#MSUB -n 31  # Number of MPI tasks (SPMD case) or cores (MPMD case)
#MSUB -c 4
#MSUB -x
#MSUB -X
#MSUB -m scratch,work
#MSUB -T 1800
##MSUB -T 7200            # Wall clock limit (seconds)
#MSUB -A gen0239
#MSUB -q skylake
#MSUB -Q test

export KMP_STACKSIZE=3g
export KMP_LIBRARY=turnaround
export MKL_SERIAL=YES
export OMP_NUM_THREADS=4

cd $BRIDGE_MSUB_PWD
. /ccc/cont003/home/igcmg/igcmg/MachineEnvironment/irene/env_irene
export FORT_BUFFERED=false
module load totalview/2018.1.12



unset SLURM_SPANK_AUKS
 rm -f out_run_file mesh*.nc solver.stat time.step date.file restartphy.nc restart.nc dynzon.dat meshmask.nc hist*.nc ice_mouchard ice_evolu sechiba_rest.nc core.*
 rm -f *IPSL-CM6-1* sechiba_out*.nc sechiba_history.nc stomate_history.nc ocean.output trace *.prt* cpl* *weights anaisout* hist*.nc dyn*.nc paramLMDZ_dyn.nc out_orchidee*
 rm -f eOR1L3P.test-1x5D* stomate_rest_out.nc sechiba_rest_out.nc
 rm -f out_* lmdz.out.* lmdz.err.* opa.err.* opa.out.* xios_*
 rm -f Script_Output*
 rm -f *1d*.nc *1ts*.nc *5ts*.nc
 rm -f *lmdz.x*.nc *oceanx*.nc *lucia* *LMDZ_*.nc runoffs_00*.nc


#ddt -start -n 1 -mpiargs "--app ./run_file_ddt"
#totalview opa.xx
ccc_mprun -d tv lmdz.x > out_lmdz 2> err_lmdz
#ccc_mprun ./lmdz.x > out_lmdz 2> err_lmdz
Last modified 2 years ago Last modified on 07/30/19 16:51:58