source: CMIP5/historical/v5.historicalCMR4/COMP/lmdz.driver @ 1961

Last change on this file since 1961 was 1961, checked in by mafoipsl, 10 years ago

v5.historicalCMR4 CMIP5 IPSL simulation registration.

  • copied from v5.historicalMR2
  • restart date changed
  • restart files copied from DMFDIR to p86ipsl WORKDIR. More info http://wiki.ipsl.jussieu.fr/EsciComptes#Les_Restarts
  • mozaic files coming from p86ipsl files
  • libIGCM v2 used (revision 751)
  • adapted to curie :
    • 53 processors
    • TS activated and run on curie (xlarge nodes)
    • PackFrequency set to 1Y
    • 1200 s averaged real time for one period/month
    • NbPeriod set to 24
    • Job real time limit set to 60000 s or 16 hours
File size: 10.2 KB
Line 
1#!/bin/ksh
2#-----------------------------------------------------------------
3function LMDZ_sed
4{
5    IGCM_debug_PushStack "LMDZ_sed"
6
7    sed -e "s/^${2}\ *=.*/${2}= ${3}/" ${1} > ${1}.tmp
8    RET=$?
9    echo "LMDZ_sed : ${1} ${2} ${3}"
10    \mv ${1}.tmp ${1}
11
12    IGCM_debug_PopStack "LMDZ_sed"
13    return $RET
14}
15
16function ATM_Initialize
17{
18    IGCM_debug_PushStack "ATM_Initialize"
19
20    RESOL_ATM=$( echo $RESOL | awk "-Fx" '{print $2}' | awk "-F-" '{print $1}')
21
22    [ -f ${SUBMIT_DIR}/../.resol ] && eval $(grep RESOL_ATM_3D ${SUBMIT_DIR}/../.resol) || RESOL_ATM_3D=96x95x19
23
24    RESOL_ATM_Z=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $3}' )
25
26    ##-- Calendar type for LMDZ
27    case ${config_UserChoices_CalendarType} in
28        leap|gregorian)
29            CalendarTypeForLmdz=earth_366d;;
30        noleap)
31            CalendarTypeForLmdz=earth_365d;;
32        360d)
33            CalendarTypeForLmdz=earth_360d;;
34        *)
35            CalendarTypeForLmdz=earth_360d
36    esac
37
38    ##--Frequency purpose ....
39    ##--  Initialisation  ....
40    OK_instan=n
41    OK_journe=n
42    OK_mensuel=n
43    ok_hf=n
44
45    case ${config_UserChoices_PeriodLength} in
46        1Y|1y|1M|1m) OK_mensuel=y ;;
47        5D|5d|1D|1d) OK_journe=y ;;
48    esac
49
50    for frequency in ${config_ATM_WriteFrequency} ; do
51        case ${frequency} in
52            5D|5d|1D|1d) OK_journe=y ;;
53        esac
54        case ${frequency} in
55            HF|hf) 
56                ok_hf=y
57                OK_instan=y
58                ;;
59        esac
60    done
61
62    ## Read LMDZ_NbPeriod_adjust option in lmdz.card
63    IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices LMDZ_NbPeriod_adjust
64    LMDZ_NbPeriod_adjust=${lmdz_UserChoices_LMDZ_NbPeriod_adjust}
65
66    if [ ${LMDZ_NbPeriod_adjust} -eq 0 ] ; then
67        IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices LMDZ_Bands_file_name
68        LMDZ_Bands_file_name=${lmdz_UserChoices_LMDZ_Bands_file_name}
69    fi
70
71    ##  Read LMDZ_Freq_aero and LMDZ_Length_aero in lmdz.card
72    LMDZ_Freq_aero=${lmdz_UserChoices_LMDZ_Freq_aero}
73    LMDZ_Length_aero=${lmdz_UserChoices_LMDZ_Length_aero}
74
75    ##  Read LMDZ_COSP_monthly  LMDZ_COSP_daily and LMDZ_COSP_hf in lmdz.card
76    LMDZ_COSP_OK=${lmdz_UserChoices_LMDZ_COSP_OK}
77    LMDZ_COSP_monthly=${lmdz_UserChoices_LMDZ_COSP_monthly}
78    LMDZ_COSP_daily=${lmdz_UserChoices_LMDZ_COSP_daily}
79    LMDZ_COSP_hf=${lmdz_UserChoices_LMDZ_COSP_hf}
80
81    ##  Read LMDZ_NMC_monthly  LMDZ_NMC_daily and LMDZ_NMC_hf in lmdz.card
82    LMDZ_NMC_monthly=${lmdz_UserChoices_LMDZ_NMC_monthly}
83    LMDZ_NMC_daily=${lmdz_UserChoices_LMDZ_NMC_daily}
84    LMDZ_NMC_hf=${lmdz_UserChoices_LMDZ_NMC_hf}
85
86    IGCM_debug_PopStack "ATM_Initialize"
87}
88
89#-----------------------------------------------------------------
90function ATM_Update
91{
92    IGCM_debug_PushStack "ATM_Update"
93
94    case ${config_UserChoices_PeriodLength} in
95        *Y|*y) 
96               LMDZ_ecrit_mth=30.
97               LMDZ_ecrit_ISCCP=30.
98               LMDZ_periodav=30.
99               if [ "${config_UserChoices_CalendarType}" != "360d" ] ; then
100                  echo Change calendartype in config.card. PeriodLength=1Y allowed only for CalendarType=360d
101                  exit
102               fi
103               ;;
104        *)
105               LMDZ_ecrit_mth=${PeriodLengthInDays}.
106               LMDZ_ecrit_ISCCP=${PeriodLengthInDays}.
107               LMDZ_periodav=${PeriodLengthInDays}.
108               ;;
109    esac
110
111    ##-- Remise ou non a zero de la date initiale de LMDZ pour le fichier run.def
112    if [ ${CumulPeriod} -eq 1 ] ; then
113        RAZ_DATE=1
114    else
115        RAZ_DATE=0
116    fi
117
118    ## To have more variables in output files for aerosols. Parameters are set in lmdz.card
119    #if [ ${CumulPeriod}%${LMDZ_Freq_aero} -le ${LMDZ_Length_aero} ]; then
120    #   if [ ${CumulPeriod}%${LMDZ_Freq_aero} -ne 0 ]; then
121    #      lev_histmth=4
122    #   else
123    #      lev_histmth=2   
124    #   fi
125    #else
126    #   lev_histmth=2
127    #fi   
128
129    ## algo : For CumulPeriod=1 ;
130    ##        IF NbPeriod_Adjust = 0, Get Bands file directly from server, store it with _0 suffix
131    ##        ELSE LMDZ_adjust=y ; save Bands file on file server ;
132    ##        For CumulPeriod=2 to LMDZ_NbPeriod_adjust ; Get Bands file from server (CumulPeriod-1) ; LMDZ_adjust=y ; save Bands file on file server ;
133    ##        For CumulPeriod > LMDZ_NbPeriod_adjust ; LMDZ_adjust=n ; Get Bands file from server (CumulPeriod=LMDZ_NbPeriod_adjust 0 to force it) ; Use Bands ;
134
135    if [ ${CumulPeriod} -eq 1 ] ; then
136        if [ ${LMDZ_NbPeriod_adjust} -eq 0 ] ; then
137            IGCM_sys_Get ${LMDZ_Bands_file_name} Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat
138            IGCM_sys_Put_Out Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${R_OUT_ATM_D}/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_0
139            IGCM_sys_Chmod u+w Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat
140            IGCM_debug_Print 1 "Bands file forced to ${LMDZ_Bands_file_name} and stored in ${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_0"
141        fi
142    fi
143
144    LMDZ_adjust=n
145    [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] && LMDZ_adjust=y
146
147    RefPeriod=${LMDZ_NbPeriod_adjust} #0 to use a Bands file from Restart
148    [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] && (( RefPeriod = ${CumulPeriod} - 1 )) 
149
150    [ ${CumulPeriod} -gt 1 ] && ( IGCM_sys_Get ${R_OUT_ATM_D}/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${RefPeriod} Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ; IGCM_sys_Chmod u+w Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat )
151
152    ##-- GHG forcing for the current year
153    IPCC_SOLAR=`grep Annee_${year} SOLARANDVOLCANOES_1610_2008.txt | awk -F= '{print $2}'`
154    IPCC_CO2=`grep Annee_${year} CO2_1765_2005.txt | awk -F= '{print $2}'`
155    IPCC_CH4=`grep Annee_${year} CH4_1765_2005.txt | awk -F= '{print $2}'`
156    IPCC_N2O=`grep Annee_${year} N2O_1765_2005.txt | awk -F= '{print $2}'`
157    IPCC_CFC11=`grep Annee_${year} CFC11_1765_2005.txt | awk -F= '{print $2}'`
158    IPCC_CFC12=`grep Annee_${year} CFC12_1765_2005.txt | awk -F= '{print $2}'`
159
160    ##-- For historical daily cosp must be output during 1979-2005 period
161    [ ${year} -ge 1979 ] && LMDZ_COSP_daily=y
162
163    ## physiq.def parameters modified from initial physiq_L${RESOL_ATM_Z}
164    LMDZ_sed physiq.def OK_instan   ${OK_instan}
165    LMDZ_sed physiq.def OK_journe   ${OK_journe}
166    LMDZ_sed physiq.def OK_mensuel  ${OK_mensuel}
167    #LMDZ_sed physiq.def lev_histmth ${lev_histmth}
168    LMDZ_sed physiq.def ok_hf       ${ok_hf}
169    LMDZ_sed physiq.def ecrit_mth   ${LMDZ_ecrit_mth}
170    LMDZ_sed physiq.def ecrit_ISCCP ${LMDZ_ecrit_ISCCP}
171    LMDZ_sed physiq.def ok_cosp     ${LMDZ_COSP_OK}
172    LMDZ_sed physiq.def ok_mensuelCOSP  ${LMDZ_COSP_monthly}
173    LMDZ_sed physiq.def ok_journeCOSP   ${LMDZ_COSP_daily}
174    LMDZ_sed physiq.def ok_hfCOSP   ${LMDZ_COSP_hf}
175    LMDZ_sed physiq.def ok_histNMC  "${LMDZ_NMC_monthly}, ${LMDZ_NMC_daily}, ${LMDZ_NMC_hf}"
176    LMDZ_sed physiq.def solaire     ${IPCC_SOLAR}
177    LMDZ_sed physiq.def co2_ppm     ${IPCC_CO2}
178    LMDZ_sed physiq.def CH4_ppb     ${IPCC_CH4}
179    LMDZ_sed physiq.def N2O_ppb     ${IPCC_N2O}
180    LMDZ_sed physiq.def CFC11_ppt   ${IPCC_CFC11}
181    LMDZ_sed physiq.def CFC12_ppt   ${IPCC_CFC12}
182
183    ## gcm.def parameters : no change since gcm.def_${RESOL_ATM_3D} is used and already modified
184
185    ## run.def parameters
186    LMDZ_sed run.def dayref   ${InitDay}
187    LMDZ_sed run.def anneeref ${InitYear}
188    LMDZ_sed run.def calend   ${CalendarTypeForLmdz}
189    LMDZ_sed run.def nday     ${PeriodLengthInDays}
190    LMDZ_sed run.def raz_date ${RAZ_DATE}
191    LMDZ_sed run.def periodav ${LMDZ_periodav}
192    LMDZ_sed run.def adjust   ${LMDZ_adjust}
193
194    ## Read ByPass_hgardfou_teta option in lmdz.card --> divide teta* by 2 if [ $ByPass_hgardfou_teta = 1 ]
195    IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_teta
196    ByPass_hgardfou_teta=${lmdz_UserChoices_ByPass_hgardfou_teta}
197    if [ ${ByPass_hgardfou_teta} = y ] ; then
198        awk '{ if ($0 ~ /^teta.*=/) {split($0,a,"=") ; print a[1]"="a[2]/2"."} else print $0}' gcm.def > gcm.def.tmp
199        IGCM_sys_Mv gcm.def.tmp gcm.def
200        echo
201        IGCM_debug_Print 1 "ByPass_hgardfou_teta : ^teta*/2 in gcm.def"
202        echo
203        cat gcm.def
204        ByPass_hgardfou_teta=n
205        IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_teta "${ByPass_hgardfou_teta}"
206    fi
207
208    ## Read ByPass_hgardfou_mats option in lmdz.card --> purmats=y 2 if [ $ByPass_hgardfou_mats = 1 ]
209    IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_mats
210    ByPass_hgardfou_mats=${lmdz_UserChoices_ByPass_hgardfou_mats}
211    if [ ${ByPass_hgardfou_mats} = y ] ; then
212        sed -e "s/^purmats=.*/purmats=y/" gcm.def > gcm.def.tmp
213        IGCM_sys_Mv gcm.def.tmp gcm.def
214        echo
215        IGCM_debug_Print 1 "ByPass_hgardfou_mats : purmats=y in gcm.def"
216        echo
217        cat gcm.def
218        ByPass_hgardfou_mats=n
219        IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_mats "${ByPass_hgardfou_mats}"
220    fi
221
222    if ( ${FirstInitialize} ) ; then
223
224        if ( [ "${config_Restarts_OverRule}" = "n" ] && [ "${config_ATM_Restart}" = "n" ] ); then
225            if [ ${DRYRUN} -le 2 ] ; then
226                ##-- suppression of ozone file construction --
227                cp physiq.def physiq.def.save
228                LMDZ_sed physiq.def read_climoz 0
229                IGCM_sys_Cp ${R_EXE}/create_etat0_limit.e ${RUN_DIR}/.
230                if [ ${DRYRUN} -le 1 ] ; then
231                    ${HOST_MPIRUN_COMMAND} -np 1 ./create_etat0_limit.e
232                    IGCM_sys_Put_Out start.nc    ${R_OUT_ATM_R}/${config_UserChoices_JobName}_${PeriodDateBegin}_start.nc
233                    IGCM_sys_Put_Out startphy.nc ${R_OUT_ATM_R}/${config_UserChoices_JobName}_${PeriodDateBegin}_startphy.nc
234                fi
235                IGCM_sys_Mv physiq.def.save physiq.def
236            else
237                echo "EXECUTION of ${HOST_MPIRUN_COMMAND} -np 1 ./create_etat0_limit.e simulated"
238                echo "EXECUTION of ${HOST_MPIRUN_COMMAND} -np 1 ./create_etat0_limit.e simulated for DRYRUN = " $DRYRUN >> stack
239            fi
240        fi
241
242    fi
243
244    IGCM_debug_PopStack "ATM_Update"
245}
246
247#-----------------------------------
248function ATM_Finalize
249{
250    IGCM_debug_PushStack "ATM_Finalize"
251
252    [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] && IGCM_sys_Put_Out Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${R_OUT_ATM_D}/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${CumulPeriod}
253
254    echo FINALIZE ATM !
255
256    IGCM_debug_PopStack "ATM_Finalize"
257}
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