1 | #!/bin/ksh |
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2 | #----------------------------------------------------------------- |
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3 | function OCE_Initialize |
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4 | { |
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5 | IGCM_debug_PushStack "OCE_Initialize" |
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6 | |
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7 | JOB_NAME=${config_UserChoices_JobName} |
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8 | |
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9 | RESOL_OCE_ICE=$( echo ${RESOL} | awk "-Fx" '{print $1}' ) |
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10 | case ${RESOL_OCE_ICE} in |
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11 | ( *LIM2* ) SEAICE_MODEL=LIM2 ; LIM_VERSION=2 ;; |
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12 | ( *LIM3* ) SEAICE_MODEL=LIM3 ; LIM_VERSION=3 ;; |
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13 | ( *CICE* ) SEAICE_MODEL=CICE ;; |
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14 | ( * ) SEAICE_MODEL=UNKNOWN ;; |
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15 | esac |
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16 | RESOL_OCE=$( echo ${RESOL_OCE_ICE} | sed "s/${SEAICE_MODEL}//" ) |
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17 | |
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18 | IGCM_debug_Print 1 "RESOL : ${RESOL}" |
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19 | IGCM_debug_Print 1 "RESOL_OCE_ICE : ${RESOL_OCE_ICE}" |
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20 | IGCM_debug_Print 1 "SEAICE_MODEL : ${SEAICE_MODEL}" |
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21 | IGCM_debug_Print 1 "LIM_VERSION : ${LIM_VERSION}" |
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22 | IGCM_debug_Print 1 "RESOL_OCE : ${RESOL_OCE}" |
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23 | |
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24 | # Local function to find namelists parameters |
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25 | #supergrep () { grep "^ *$1 *=" $2 | sed -e "s% *\!.*%%" ; } |
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26 | supergrep () { grep "^ *$1 *=" $2 | sed -e "s% *\!.*%%" -e "s%^ *$1 *=%%" ; } |
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27 | ##--Variables used by OPA -- |
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28 | NAMELIST_OPA_CFG=${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}_cfg |
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29 | IGCM_debug_Print 1 "namelist_cfg : ${NAMELIST_OPA_CFG}" |
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30 | if [ ! -r ${NAMELIST_OPA_CFG} ] ; then |
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31 | IGCM_debug_Exit "${NAMELIST_OPA_CFG} not found" |
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32 | IGCM_debug_Verif_Exit |
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33 | fi |
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34 | OPA_RDT=$( supergrep rn_rdt ${NAMELIST_OPA_CFG} ) |
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35 | OPA_NN_FSBC=$( supergrep nn_fsbc ${NAMELIST_OPA_CFG} ) |
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36 | # |
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37 | # OPA_RDT=$( supergrep rn_rdt namelist_cfg ) |
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38 | # OPA_NN_FSBC=$( supergrep nn_fsbc namelist_cfg ) |
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39 | (( OPA_NPDT_JOUR = 86400 / OPA_RDT )) |
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40 | (( OPA_RDT_SBC = OPA_RDT * OPA_NN_FSBC )) |
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41 | |
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42 | # Period Length In Days between DateBegin and first day of calendar 0001 01 01 |
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43 | # /!\ Needed by OPA namelist to compute file names /!\ |
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44 | (( DaysSinceJC = $( IGCM_date_DaysSinceJC ${DateBegin} ) + 1 )) |
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45 | |
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46 | # Parallelism |
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47 | OCE_PROC_MPI=$(echo ${config_Executable_OCE[2]} | sed s'/MPI//' ) |
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48 | OPA_JPNI=$(supergrep jpni ${NAMELIST_OPA_CFG} ) |
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49 | OPA_JPNJ=$(supergrep jpnj ${NAMELIST_OPA_CFG} ) |
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50 | IGCM_debug_Print 1 " " |
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51 | IGCM_debug_Print 1 "Readed OPA_JPNI ${OPA_JPNI}" |
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52 | IGCM_debug_Print 1 "Readed OPA_JPNJ ${OPA_JPNJ}" |
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53 | IGCM_debug_Print 1 "OCE_PROC_MPI ${OCE_PROC_MPI}" |
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54 | |
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55 | (( Residu = OCE_PROC_MPI % OPA_JPNJ )) |
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56 | if [[ ${Residu} != 0 ]] ; then |
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57 | IGCM_debug_Exit "OCE_PROC_MPI (specified in config.card, [Executable]) is not a multiple of OPA_JPNJ" |
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58 | #IGCM_debug_Verif_Exit |
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59 | fi |
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60 | |
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61 | (( OPA_JPNI = OCE_PROC_MPI / OPA_JPNJ )) |
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62 | (( OPA_JPNIJ = OPA_JPNI * OPA_JPNJ )) |
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63 | IGCM_debug_Print 1 "Computed OPA_JPNI ${OPA_JPNI}" |
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64 | IGCM_debug_Print 1 "Computed OPA_JPNIJ ${OPA_JPNIJ}" |
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65 | |
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66 | if [[ ${OCE_PROC_MPI} != ${OPA_JPNIJ} ]] ; then |
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67 | IGCM_debug_Exit "OCE_PROC_MPI /= OPA_JPNI * OPA_JPNJ" |
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68 | IGCM_debug_Verif_Exit |
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69 | fi |
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70 | |
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71 | # |
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72 | IGCM_debug_Print 1 " " |
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73 | IGCM_debug_Print 1 "OPA_RDT ${OPA_RDT}" |
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74 | IGCM_debug_Print 1 "OPA_NN_FSBC ${OPA_NN_FSBC}" |
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75 | IGCM_debug_Print 1 "OPA_RDT_SBC ${OPA_RDT_SBC}" |
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76 | IGCM_debug_Print 1 "OPA_NPDT_JOUR ${OPA_NPDT_JOUR}" |
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77 | IGCM_debug_Print 1 "DaysSinceJC ${DaysSinceJC}" |
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78 | |
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79 | ## Check that nn_fsbc is correct compare to coupling frequency |
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80 | FreqCoupling=${oasis_UserChoices_FreqCoupling:-86400} |
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81 | |
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82 | ## This informations are used for diaptr, trends and diagap files |
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83 | ## only the first frequency is used for this files |
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84 | |
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85 | IGCM_debug_Print 1 "FreqCoupling ${FreqCoupling}" |
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86 | IGCM_debug_Print 1 "OPA_NN_FSBC ${OPA_NN_FSBC}" |
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87 | IGCM_debug_Print 1 "OPA_RDT ${OPA_RDT}" |
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88 | IGCM_debug_Print 1 "OPA_RDT_SBC ${OPA_RDT_SBC}" |
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89 | |
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90 | if [[ ${OPA_RDT_SBC} -gt ${FreqCoupling} ]] ; then |
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91 | IGCM_debug_Exit "OPA_RDT_SBC=${OPA_RDT_SBC} is greater than FreqCoupling=${FreqCoupling}" |
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92 | IGCM_debug_Verif_Exit |
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93 | fi |
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94 | |
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95 | IGCM_debug_PopStack "OCE_Initialize" |
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96 | |
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97 | } |
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98 | |
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99 | #----------------------------------------------------------------- |
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100 | function OCE_Update |
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101 | { |
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102 | IGCM_debug_PushStack "OCE_Update" |
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103 | |
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104 | ##--Write Frequency for iomput |
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105 | ## Differents frequencies are allowed for grid_[TUVW] and icemod files |
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106 | |
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107 | V1D_ENABLE=".FALSE." |
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108 | V1M_ENABLE=".FALSE." |
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109 | V1Y_ENABLE=".FALSE." |
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110 | |
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111 | for frequency in ${config_OCE_WriteFrequency} ; do |
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112 | case ${frequency} in |
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113 | ( 1D|1d ) V1D_ENABLE=".TRUE." ;; |
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114 | ( 1M|1m ) V1M_ENABLE=".TRUE." ;; |
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115 | ( *[yY] ) V1Y_ENABLE=".TRUE." ;; |
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116 | esac |
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117 | done |
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118 | |
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119 | ##-- Output level : 3 for more 1D variables |
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120 | eval opa9_OUTPUT_LEVEL=\${opa9_UserChoices_OUTPUT_LEVEL} > /dev/null 2>&1 |
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121 | OUTPUT_LEVEL=${opa9_OUTPUT_LEVEL} |
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122 | |
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123 | # Period Length In Days between DateBegin and first day of calendar 0001 01 01 |
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124 | # Needed by OPA namelist to compute correct file names |
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125 | (( PeriodDaysSinceJC = $( IGCM_date_DaysSinceJC ${PeriodDateBegin} ) + 1 )) |
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126 | |
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127 | ##-- Number of time steps updated : the first, the last and the number of time steps |
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128 | (( OPA_NIT000 = ( PeriodDaysSinceJC - DaysSinceJC ) * OPA_NPDT_JOUR + 1 )) |
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129 | (( OPA_NPDT = PeriodLengthInDays * OPA_NPDT_JOUR )) |
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130 | (( OPA_NITEND = OPA_NIT000 + OPA_NPDT - 1)) |
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131 | |
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132 | ##-- We force one restart file at the end of the trunk |
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133 | OPA_NSTOCK="${OPA_NITEND}" |
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134 | |
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135 | ##-- Restart configuration |
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136 | if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then |
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137 | OPA_LRSTAR=.FALSE. |
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138 | OPA_NRSTDT=0 |
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139 | # Put OPA_NMSH=0 when OPA running in parallel mode |
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140 | OPA_NMSH=1 |
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141 | #echo "NO OPA RESTART" |
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142 | elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "y" ] ) ; then |
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143 | OPA_LRSTAR=.TRUE. |
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144 | OPA_NRSTDT=0 |
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145 | OPA_NMSH=1 |
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146 | #echo "OPA RESTART" |
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147 | else |
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148 | OPA_LRSTAR=.TRUE. |
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149 | OPA_NRSTDT=2 |
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150 | OPA_NMSH=0 |
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151 | #echo "OPA RESTART" |
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152 | fi |
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153 | |
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154 | ##-- Meshmask option |
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155 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/opa9.card UserChoices mesh_mask |
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156 | |
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157 | if [ "${opa9_UserChoices_mesh_mask}" = "y" ]; then |
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158 | OPA_NMSH=1 |
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159 | IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/opa9.card UserChoices mesh_mask "n" |
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160 | fi |
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161 | |
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162 | # nleapy configuration |
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163 | case ${config_UserChoices_CalendarType} in |
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164 | ( leap|gregorian) OPA_NLEAPY=1 ;; |
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165 | ( noleap ) OPA_NLEAPY=0 ;; |
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166 | ( 360d ) OPA_NLEAPY=30 ;; |
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167 | ( * ) OPA_NLEAPY=30 ;; |
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168 | esac |
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169 | |
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170 | typeset -r PRECIS=8 |
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171 | NEMO_END=$( echo $( awk "BEGIN { printf \"%0${PRECIS}d\",${OPA_NITEND} }" ) ) |
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172 | |
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173 | IGCM_comp_modifyNamelist blocker namelist_cfg cn_exp ${config_UserChoices_JobName} |
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174 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_it000 ${OPA_NIT000} |
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175 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_itend ${OPA_NITEND} |
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176 | IGCM_comp_modifyNamelist blocker namelist_cfg ln_rstart ${OPA_LRSTAR} |
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177 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_stock ${OPA_NSTOCK} |
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178 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_rstctl ${OPA_NRSTDT} |
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179 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_date0 ${PeriodDateBegin} |
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180 | IGCM_comp_modifyNamelist nonblocker namelist_cfg nn_msh ${OPA_NMSH} |
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181 | IGCM_comp_modifyNamelist nonblocker namelist_cfg nn_rnf_depth_file ${OPA_NMSH} |
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182 | IGCM_comp_modifyNamelist blocker namelist_cfg nn_leapy ${OPA_NLEAPY} |
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183 | |
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184 | # Update iodef.xml |
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185 | |
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186 | IGCM_debug_Print 1 'Informations into iodef.xml : V1D_ENABLE V1M_ENABLE V1Y_ENABLE OUTPUT_LEVEL' |
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187 | IGCM_debug_Print 1 ${V1D_ENABLE} ${V1M_ENABLE} ${V1Y_ENABLE} ${OUTPUT_LEVEL} |
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188 | |
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189 | IGCM_comp_modifyXmlFile nonblocker file_def_nemo.xml 1d enabled ${V1D_ENABLE} |
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190 | IGCM_comp_modifyXmlFile nonblocker file_def_nemo.xml 1m enabled ${V1M_ENABLE} |
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191 | IGCM_comp_modifyXmlFile nonblocker file_def_nemo.xml 1y enabled ${V1Y_ENABLE} |
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192 | |
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193 | # vargas/titane/MPP and switch from 1 proc to 5 procs. We need to suppres restartopa the second month, if restartopa_0000 exist |
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194 | # same thing for restart_trc and restart_ice_in |
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195 | |
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196 | for restartfilenemo in restartopa restart_trc restart_ice_in ; do |
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197 | [ -f ${restartfilenemo}.nc ] && [ -f ${restartfilenemo}_0000.nc ] && IGCM_sys_Rm -f ${restartfilenemo}.nc |
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198 | done |
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199 | |
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200 | # Add include of nemo context in iodef.xml |
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201 | # In iodef.xml add on next line after "COMPONENT CONTEXT" |
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202 | # <context id="nemo" src="./context_nemo.xml"/> |
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203 | echo '<context id="nemo" src="./context_nemo.xml"/>' > add.tmp |
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204 | cp iodef.xml iodef.xml.tmp |
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205 | sed -e "/COMPONENT CONTEXT/r add.tmp" \ |
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206 | iodef.xml.tmp > iodef.xml |
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207 | rm iodef.xml.tmp add.tmp |
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208 | |
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209 | IGCM_debug_PopStack "OCE_Update" |
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210 | } |
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211 | |
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212 | #----------------------------------- |
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213 | function OCE_Finalize |
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214 | { |
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215 | IGCM_debug_PushStack "OCE_Finalize" |
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216 | |
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217 | IGCM_debug_Print 1 FINALIZE OCE !!! |
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218 | |
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219 | IGCM_debug_PopStack "OCE_Finalize" |
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220 | } |
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