source: CONFIG/UNIFORM/v6/LMDZOR_v6/GENERAL/DRIVER/orchidee.driver

Last change on this file was 6263, checked in by jgipsl, 6 weeks ago

If stomate is not activate, change AUTO for new file in stomate from orchidee.driver. Related to [6262].

File size: 11.0 KB
Line 
1#!/bin/ksh
2## Driver for the component SRF corresponding to the sechiba part of ORCHIDEE
3#-----------------------------------------------------------------
4function SRF_Initialize
5{
6    IGCM_debug_PushStack "SRF_Initialize"
7
8    ##- Define variable DefSuffix set in orchidee.card
9    ##  This variable is used in orchidee.card to choose
10    ##  parameter file(orchidee.def_DefSuffix).
11    if [ ! X${orchidee_UserChoices_DefSuffix} = X ] ; then
12        DefSuffix=${orchidee_UserChoices_DefSuffix}
13    else
14        DefSuffix=CWRR
15    fi
16
17    IGCM_debug_PopStack "SRF_Initialize"
18}
19
20#-----------------------------------------------------------------
21function SRF_Update
22{
23    IGCM_debug_PushStack "SRF_Update"
24
25    ## 1. Modifications in orchidee.def parameter file
26
27    # Activate STOMATE if the compontent SBG=stomate is set in config.card
28    if [ X${config_ListOfComponents_SBG} = Xstomate ] ; then
29        # Activate stomate in orchidee.def
30        IGCM_comp_modifyDefFile blocker orchidee.def STOMATE_OK_STOMATE y
31    else
32        # Deactivate stomate in orchidee.def
33        IGCM_comp_modifyDefFile blocker orchidee.def STOMATE_OK_STOMATE n
34        # Deactivate output files for stomate
35        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate1 enabled .FALSE.
36        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate1 output_level 0
37        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate1 output_freq 1mo
38        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate2 enabled .FALSE.
39        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate2 output_level 0
40        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate2 output_freq 1mo
41        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate3 enabled .FALSE.
42        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate3 output_level 0
43        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate3 output_freq 1mo
44        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate4 enabled .FALSE.
45        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate4 output_level 0
46        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml stomate4 output_freq 1mo
47    fi
48
49    # Define in orchidee.def if restart file should be used
50    if ( [ ${CumulPeriod} -ne 1 ] || [ "${config_SRF_Restart}" != "n" ] ) ; then
51        IGCM_comp_modifyDefFile blocker orchidee.def SECHIBA_restart_in sechiba_rest_in.nc
52    else
53        IGCM_comp_modifyDefFile blocker orchidee.def SECHIBA_restart_in NONE
54    fi
55
56    # Set VEGET_UPDATE=1Y in orchidee.def if VEGET_UPDATE_at_start=y in orchidee.card and if it is the first cumul periond (start of new simulation)
57    if [ X${orchidee_UserChoices_VEGET_UPDATE_at_start} = Xy ] && [ ${CumulPeriod} -eq 1 ] ; then
58        IGCM_comp_modifyDefFile nonblocker orchidee.def VEGET_UPDATE   1Y
59    fi
60
61    # Modify in orchidee.def VEGET_UPDATE if it is set in orchidee.card section UserChoices
62    # Note: if the variable has been set by VEGET_UPDATE_at_start, this section will not overwrite it.
63    if [ ! X${orchidee_UserChoices_VEGET_UPDATE} = X ] ; then
64        IGCM_comp_modifyDefFile nonblocker orchidee.def VEGET_UPDATE   ${orchidee_UserChoices_VEGET_UPDATE}
65    else
66        IGCM_comp_modifyDefFile nonblocker orchidee.def VEGET_UPDATE 0Y
67    fi
68
69    # Set parameters related to ROUTING in orchidee.def
70    if [ X${orchidee_UserChoices_ROUTING} = X ] || [ X${orchidee_UserChoices_ROUTING} = Xstandard ]; then
71        # Nothing is set or ROUTING=standard in orchidee.def, default option
72        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_ROUTING y
73        IGCM_comp_modifyDefFile nonblocker orchidee.def ROUTING_METHOD  standard
74    elif [ X${orchidee_UserChoices_ROUTING} = Xsimple ]; then
75        # ROUTING=simple is set in orchidee.card
76        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_ROUTING y
77        IGCM_comp_modifyDefFile nonblocker orchidee.def ROUTING_METHOD  simple
78    elif [ X${orchidee_UserChoices_ROUTING} = Xhighres ]; then
79        # ROUTING=highres is set in orchidee.card
80        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_ROUTING y
81        IGCM_comp_modifyDefFile nonblocker orchidee.def ROUTING_METHOD  highres
82    else
83        # ROUTING=off, routing will be deactivated
84        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_ROUTING n
85        IGCM_comp_modifyDefFile nonblocker orchidee.def ROUTING_METHOD  standard
86    fi
87
88    # Set LAI_MAP in orchidee.def acording to value set in orchidee.card section UserChoices
89    # If LAI_MAP is not definded in orchidee.card, set default value n
90    # Note: this option is only read by ORCHIDEE if starting without restart files
91    if [ ! X${orchidee_UserChoices_LAI_MAP} = X ] ; then
92        IGCM_comp_modifyDefFile nonblocker orchidee.def LAI_MAP   ${orchidee_UserChoices_LAI_MAP}
93    else
94        IGCM_comp_modifyDefFile nonblocker orchidee.def LAI_MAP   DEFAULT
95    fi
96
97    # Set DO_WOOD_HARVEST in orchidee.def acording to value set in orchidee.card section UserChoices
98    # If DO_WOOD_HARVEST is not definded in orchidee.card, set default value y
99    if [ ! X${orchidee_UserChoices_DO_WOOD_HARVEST} = X ] ; then
100        IGCM_comp_modifyDefFile nonblocker orchidee.def DO_WOOD_HARVEST   ${orchidee_UserChoices_DO_WOOD_HARVEST}
101    else
102        IGCM_comp_modifyDefFile nonblocker orchidee.def DO_WOOD_HARVEST   DEFAULT
103    fi
104
105    # Activate creation of river description file only for the first period
106    if [ ${CumulPeriod} -eq 1 ] ; then
107        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_DESC y
108    else
109        IGCM_comp_modifyDefFile nonblocker orchidee.def RIVER_DESC n
110    fi
111
112    # Activate calcul of chemistry BVOC
113    if [ ! X${orchidee_UserChoices_CHEMISTRY_BVOC} = X ] ; then
114        IGCM_comp_modifyDefFile nonblocker orchidee.def CHEMISTRY_BVOC ${orchidee_UserChoices_CHEMISTRY_BVOC}
115    else
116        IGCM_comp_modifyDefFile nonblocker orchidee.def CHEMISTRY_BVOC n
117    fi
118
119    ## 2. Mangement of output and modifications of related xml files
120    # Modify file_def_orchidee.xml file using settings from orchidee.card
121    # We here suppose that for each file, in orchidee.card UserChoices section, if the parameter
122    # output_level_filename is set, then also output_freq_filename must be set. The existance of output_freq_filename will not be checked.
123    # If output_level_filename=NONE or if it is not set, the corresponding file will be deactivated.
124    # Settings in config.card WriteFrequency are not used any more.
125   
126    if [ X${orchidee_UserChoices_output_level_sechiba_history} = X ] || [ X${orchidee_UserChoices_output_level_sechiba_history} = XNONE ] ; then
127        # output_level_sechiba_history is not set in orchidee.card or it is set to NONE.
128        # Deactivate the file.
129        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 enabled .FALSE.
130        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 output_level 0
131        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 output_freq 1mo
132    else
133        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 enabled      .TRUE.
134        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 output_level ${orchidee_UserChoices_output_level_sechiba_history}
135        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba1 output_freq  ${orchidee_UserChoices_output_freq_sechiba_history}
136    fi
137   
138    if [ X${orchidee_UserChoices_output_level_sechiba_out_2} = X ] || [ X${orchidee_UserChoices_output_level_sechiba_out_2} = XNONE ] ; then
139        # output_level_sechiba_out_2 is not set in orchidee.card or it is set to NONE.
140        # Deactivate the file.
141        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 enabled .FALSE.
142        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 output_level 0
143        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 output_freq 1mo
144    else
145        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 enabled      .TRUE.
146        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 output_level ${orchidee_UserChoices_output_level_sechiba_out_2}
147        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba2 output_freq  ${orchidee_UserChoices_output_freq_sechiba_out_2}
148    fi
149   
150    if [ X${orchidee_UserChoices_output_level_sechiba_history_4dim} = X ] || [ X${orchidee_UserChoices_output_level_sechiba_history_4dim} = XNONE ] ; then
151        # output_level_sechiba_history_4dim is not set in orchidee.card or it is set to NONE.
152        # Deactivate the file.
153        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 enabled .FALSE.
154        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 output_level 0
155        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 output_freq 1mo
156    else
157        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 enabled      .TRUE.
158        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 output_level ${orchidee_UserChoices_output_level_sechiba_history_4dim}
159        IGCM_comp_modifyXmlFile nonblocker file_def_orchidee.xml sechiba3 output_freq  ${orchidee_UserChoices_output_freq_sechiba_history_4dim}
160    fi
161       
162
163    # Add include of orchidee context in iodef.xml
164    # In iodef.xml add on the next line after "COMPONENT CONTEXT"
165    echo '<context id="orchidee" src="./context_orchidee.xml"/>' > add.tmp
166
167    # Add inclusion of file context_input_orchidee.xml if this file exists
168    if [ -f context_input_orchidee.xml ] ; then
169        echo '<context id="orchidee" src="./context_input_orchidee.xml"/>' >> add.tmp
170    fi
171
172    # Add inclusion of file context_routing_orchidee.xml if this file exists
173    if [ -f context_routing_orchidee.xml ] ; then
174        echo '<context id="orchidee" src="./context_routing_orchidee.xml"/>' >> add.tmp
175    fi
176
177    # Include xml files for output configuration if running with workflow CMIP6
178    if ( [ X"$( echo ${config_UserChoices_ExpType} | grep CMIP6 )" != "X" ] || [ X${config_Post_dr2xmlIPSL} = XTRUE ] ) ; then
179          echo '<context id="orchidee" src="./ping_orchidee.xml"/>' >> add.tmp
180          echo '<context id="orchidee" src="./dr2xml_orchidee.xml"/>' >> add.tmp
181    fi
182    cp iodef.xml iodef.xml.tmp
183    sed -e "/COMPONENT CONTEXT/r add.tmp" iodef.xml.tmp > iodef.xml
184    rm iodef.xml.tmp add.tmp
185
186    # Add LongName as global attribute in XIOS output files (if LongName is not empty)
187    if [ ! "X${config_UserChoices_LongName}" = "X" ] ; then
188        listfile=$(ls file_def*orchidee.xml)
189        echo "<variable id=\"LongName\" type=\"string\">${config_UserChoices_LongName}</variable>" > add.tmp
190        for file in ${listfile}
191        do
192            cp ${file} ${file}.tmp
193            sed -e "/<file id/r add.tmp" \
194                ${file}.tmp > ${file}
195            rm ${file}.tmp
196        done
197        rm add.tmp
198    fi
199
200    # Compression level (if CompressionLevel is not empty)
201    if [ ! "X${config_UserChoices_CompressionLevel}" = "X" ] ; then
202        echo "NetCDF output files compression level is " ${config_UserChoices_CompressionLevel}
203        listfile=$(ls file_def*orchidee.xml)
204        for file in ${listfile} ; do
205            sed -i -e "s/\(compression_level=\"\)[^\"]*\(\"\)/\1${config_UserChoices_CompressionLevel}\2/" ${file}
206        done
207    fi
208
209
210
211    IGCM_debug_PopStack "SRF_Update"
212}
213
214#-----------------------------------------------------------------
215function SRF_Finalize
216{
217    IGCM_debug_PushStack "SRF_Finalize"
218
219    IGCM_debug_PopStack "SRF_Finalize"
220}
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