1 | [Compatibility] |
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2 | libIGCM=1.0 |
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3 | |
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4 | [UserChoices] |
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5 | version=v3.6_stable |
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6 | Offline_Mode=y |
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7 | PisFreq=4 |
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8 | R_DYN=${R_BC}/OCE/${config_UserChoices_TagName}/dyna/new |
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9 | |
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10 | [InitialStateFiles] |
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11 | List= () |
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12 | |
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13 | [BoundaryFiles] |
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14 | List= (${pisces_UserChoices_R_DYN}/NEMONEW_mesh_mask_v3.6st.nc, mesh_mask.nc), \ |
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15 | (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_T.nc, dyna_grid_T.nc), \ |
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16 | (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_U.nc, dyna_grid_U.nc), \ |
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17 | (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_V.nc, dyna_grid_V.nc), \ |
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18 | (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_W.nc, dyna_grid_W.nc) |
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19 | |
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20 | ListNonDel= (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/DIC_GLODAP_annual_ORCA_R2.nc , data_DIC_nomask.nc ), \ |
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21 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Alkalini_GLODAP_annual_ORCA_R2.nc , data_ALK_nomask.nc ), \ |
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22 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/O2_WOA2009_monthly_ORCA_R2.nc , data_OXY_nomask.nc ), \ |
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23 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/PO4_WOA2009_monthly_ORCA_R2.nc , data_PO4_nomask.nc ), \ |
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24 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Si_WOA2009_monthly_ORCA_R2.nc , data_SIL_nomask.nc ), \ |
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25 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/DOC_PISCES_monthly_ORCA_R2.nc , data_DOC_nomask.nc ), \ |
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26 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Fer_PISCES_monthly_ORCA_R2.nc , data_FER_nomask.nc ), \ |
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27 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/NO3_WOA2009_monthly_ORCA_R2.nc , data_NO3_nomask.nc ), \ |
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28 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/DUST_INCA_MONTHLY_2000_2006_orca2.nc , dust.orca.nc) , \ |
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29 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/bathy.orca.nc , bathy.orca.nc) , \ |
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30 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/rivernew_OA_orca2.nc , river.orca.nc) , \ |
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31 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/duce2k.nomask.nc , ndeposition.orca.nc), \ |
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32 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/par_fraction_gewex_orca_r2_clim90s00s.nc, par.orca.nc) , \ |
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33 | (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/solubility1_T62-ORCA2_Mahowald.nc , solubility.orca.nc) |
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34 | |
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35 | |
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36 | [ParametersFiles] |
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37 | List= (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref , namelist_ref ), \ |
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38 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref , namelist_top_ref), \ |
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39 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref , namelist_pisces_ref), \ |
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40 | (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_offline_cfg , namelist_cfg ), \ |
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41 | (${SUBMIT_DIR}/PARAM/namelist_top_cfg , namelist_top_cfg), \ |
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42 | (${SUBMIT_DIR}/PARAM/namelist_pisces_${RESOL_OCE}_cfg , namelist_pisces_cfg), \ |
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43 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml , domain_def_nemo.xml ), \ |
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44 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo_offline.xml , context_nemo.xml ), \ |
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45 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml ), \ |
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46 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml, field_def_nemo-pisces.xml ) |
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47 | (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml , file_def_nemo-pisces.xml ), \ |
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48 | (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml , iodef.xml ) |
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49 | |
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50 | |
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51 | |
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52 | [RestartFiles] |
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53 | List= (${config_UserChoices_JobName}_${NEMO_END}_restart_trc.nc, restart_trc.nc, restart_trc.nc) |
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54 | |
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55 | [OutputText] |
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56 | List= (namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) |
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57 | |
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58 | [OutputFiles] |
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59 | List= (${config_UserChoices_JobName}_1y_ptrc_T.nc , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc , Post_1Y_ptrc_T ) , \ |
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60 | (${config_UserChoices_JobName}_1y_diad_T.nc , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc , Post_1Y_diad_T ) , \ |
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61 | (${config_UserChoices_JobName}_1m_bioscalar.nc , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ |
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62 | (${config_UserChoices_JobName}_1m_ptrc_T.nc , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc , Post_1M_ptrc_T ) , \ |
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63 | (${config_UserChoices_JobName}_1m_diad_T.nc , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc , Post_1M_diad_T ) , \ |
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64 | (${config_UserChoices_JobName}_1d_bioscalar.nc , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) |
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65 | |
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66 | |
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67 | |
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68 | [Post_1D_bioscalar] |
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69 | Patches = () |
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70 | GatherWithInternal = (time_counter, time_instant, time_instant_bounds) |
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71 | TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) |
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72 | ChunckJob2D = OFF |
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73 | TimeSeriesVars3D = () |
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74 | ChunckJob3D = 50Y |
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75 | Seasonal=OFF |
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76 | |
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77 | [Post_1M_bioscalar] |
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78 | Patches = () |
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79 | GatherWithInternal = (time_counter, time_instant, time_instant_bounds) |
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80 | TimeSeriesVars2D = (pno3tot, ppo4tot, psiltot, palktot, pfertot, tcflx, tcflxcum, tcexp, tintpp, tnfix, tdenit) |
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81 | ChunckJob2D = OFF |
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82 | TimeSeriesVars3D = () |
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83 | ChunckJob3D = 50Y |
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84 | Seasonal=OFF |
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85 | |
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86 | [Post_1M_ptrc_T] |
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87 | Patches = () |
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88 | GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) |
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89 | TimeSeriesVars2D = () |
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90 | ChunckJob2D = 50Y |
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91 | TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si) |
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92 | ChunckJob3D = 50Y |
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93 | Seasonal=ON |
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94 | |
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95 | [Post_1M_diad_T] |
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96 | Patches = () |
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97 | GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) |
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98 | TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) |
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99 | ChunckJob2D = 50Y |
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100 | TimeSeriesVars3D = (TPP) |
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101 | ChunckJob3D = 50Y |
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102 | Seasonal=ON |
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103 | |
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104 | [Post_1Y_ptrc_T] |
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105 | Patches = () |
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106 | GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) |
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107 | TimeSeriesVars2D = () |
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108 | ChunckJob2D = OFF |
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109 | TimeSeriesVars3D = (Alkalini, NCHL, DCHL, DIC, Fer, NO3, O2, PO4, Si ) |
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110 | ChunckJob3D = NONE |
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111 | Seasonal=OFF |
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112 | |
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113 | [Post_1Y_diad_T] |
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114 | Patches = () |
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115 | GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) |
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116 | TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup, Nfix) |
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117 | ChunckJob2D = 50Y |
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118 | TimeSeriesVars3D = (PAR, TPP) |
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119 | ChunckJob3D = 50Y |
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120 | Seasonal=OFF |
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