source: CONFIG/UNIFORM/v7/IPSLCM7/compile_ipslcm7.sh @ 6462

Last change on this file since 6462 was 6462, checked in by jgipsl, 19 months ago

Change in organisation to make it possible to have ORCHIDEE version 2_2 and version trunk(also called version 4) in the same modipsl :

  • sources are now stored in modeles/ORCHIDEE_2_2 for default settings
  • default compilation, modeles/ORCHIDEE_2_2 will be compiled => modification in mod.def is needed
  • compilation with option -orch4 compiles folder modeles/ORCHIDEE_trunk
  • executables containing ORCHIDEE has suffix orch22 for default version or orch4 for the trunk version.
  • experiment set up changes for the name of the executable and the path to xml files in the ORCHIDEE_2_2 or ORCHIDEE_trunk. An experiment set up can only be used with the version of ORCHIDEE which it is prepared for. Currently all experiments are done for ORCHIDEE_2_2 except one in ICOLMDZOR which is suffiexed by orchv4
  • Property svn:executable set to *
File size: 20.4 KB
Line 
1#!/bin/bash
2# Default options
3#
4#
5#
6date
7#### 1  Set up the compiling options
8#### Define some directories
9submitdir=$( pwd )
10modipsl=$submitdir/../..
11arch_path=$submitdir/ARCH
12mysrc_path=$submitdir/SOURCES
13export ROOT=$modipsl/modeles/DYNAMICO
14#### Set default options
15# Resolution if compiling LMDZ in regular mode without DYNAMICO
16# Use for example following "./compile_icolmdzor.sh -regular_latlon 144x142x79"
17regular_latlon=no
18# Atmospheric resolution, for LMDZ/ORCHIDEE in regular mode
19resol_atm=144x142x79
20# Coupled with ocean biogeochemistry (y/n)
21nemotop=y
22# Optimization mode
23# optmode=prod/dev/debug
24optmode=prod
25# Resolution if compiling LMDZ in regular mode without DYNAMICO
26# Use for example following "./compile_icolmdzor.sh -regular_latlon 144x142x79"
27regular_latlon=no
28# fcm_arch
29fcm_arch=default
30# Default values to be overritten
31parallel=mpi_omp
32export fcm_arch parallel xios
33full_flag=""
34full_nemo=n
35full_inca=""
36full_xios=""
37full_lmdz=""
38full_orch=""
39full_dyna=""
40# choose radiative code compilation option
41rad=rrtm
42opt_rad=""
43
44# orchversion tells if ORCHIDEE_2_2 or ORCHIDEE_trunk is compiled. This is used as argument and also in the suffix of the executables.
45# orchcomp is the key word needed for LMDZ for the compilation of coherent interface. Only used internal to the compilation script.
46orchversion=orch22
47orchcomp=orchidee2.1
48
49# Default netcdf_lib is used for XIOS but can be change by argument
50netcdf_lib=""
51
52# Output text file for compilation of each component
53datestr=`LC_ALL=C date +"%Y%m%dT%H%M"`
54outfile=$submitdir/out_compile_ipslcm7.$datestr
55echo > $outfile
56echo; echo "Text output from compilation will be stored in file out_compile_ipslcm7.$datestr"; echo 
57
58#### Read arguments
59# Loop over all arguments to modify default set up
60while (($# > 0)) ; do
61    case $1 in
62        "-h") cat <<end_help
63########################################################################
64# Usage of the script compile_ipslcm7.sh
65#
66########################################################################
67
68./compile_ipslcm7.sh [Options]
69
70
71Options: [-full] Full recompilation of all components. This option can be added to all other options.
72         [-cleannemo] Full recompilation of NEMO component only.
73         [-regular_latlon]
74         [-debug / -dev / -prod] Level of optimization. One of these can be added to all other compile options. Default: -prod.
75
76
77Example 1: Default compilation of IPSLCM7 for resolution LR
78          (Resolution atmos: nbp40 )
79./compile_ipslcm7.sh
80
81Example 2: Default resolution (LR) compiled in debug mode
82./compile_ipslcm7.sh -debug
83
84Example 3: Default compilation with full recompilation of all components. No clean is needed.
85./compile_ipslcm7.sh -full
86
87Example 4: Compilation of LMDZ in regular lat-lon for dimension 144x142x79.
88           The dimension can be changed to any other 3d dimension. DYNAMICO is also compiled as default.
89./compile_ipslcm7.sh -regular_latlon 144x142x79
90
91Example 5: Compiltion of ORCHIDEE_trunk version
92           Note that for compiling ORCHIDEE trunk you must first have extracted ORCHIDEE_trunk folder in modeles.
93           modeles/ORCHIDEE_2_2 folder can be kept at the same time.
94./compile_ipslcm7.sh -orch4
95./compile_ipslcm7.sh -regular_latlon 144x142x79 -orch4
96
97end_help
98            exit;;
99
100        "-parallel")   parallel=$2 ; shift ; shift ;;
101        "-arch")       fcm_arch="$2" ; shift ; shift ;;
102        "-debug")      optmode=debug ; shift ;;
103        "-dev")        optmode=dev ; shift ;;
104        "-prod")       optmode=prod ; shift ;;
105        "-regular_latlon")  regular_latlon=yes ; resol_atm=$2 ; shift ; shift ;;
106        "-full")       full_flag="-full"; full_nemo=y ; full_xios="--full" ; full_lmdz="-full" ; full_orch="-full" ; shift ;;
107        "-full_xios")  full_xios="--full" ; shift ;;  # Note only full_xios is using double dash: --full
108        "-full_lmdz")  full_lmdz="-full"  ; shift ;;
109        "-full_orch")  full_orch="-full"  ; shift ;;
110        "-full_nemo")  full_nemo=y ; shift ;;
111        "-full_inca")  full_inca="-clean"; shift ;;
112        "-cleannemo")  full_nemo=y ; shift ;;
113        "-rad")        rad=$2; shift ; shift ;;
114        "-orch22")     orchversion="orch22"; orchcomp=orchidee2.1; shift ; shift ;;
115        "-orch4")      orchversion="orch4"; orchcomp=orchideetrunk; shift ; shift ;;
116        *)             echo "unknown option "$1" , exiting..." ; exit
117    esac
118done
119
120echo "Following options are set in current compiling:" >> $outfile
121echo "   regular_latlon=$regular_latlon (if yes, then resol_atm=${resol_atm})" >> $outfile 
122echo "   resol_atm=${resol_atm}, resol_oce=${resol_oce}, icemodel=${icemodel}, nemotop=${nemotop}" >> $outfile 
123echo "   optmode = $optmode, parallel = $parallel, fcm_arch = $fcm_arch " >> $outfile 
124echo "   full_flag=$full_flag, full_xios=$full_xios, full_lmdz=$full_lmdz, full_orch=$full_orch, full_nemo=$full_nemo, full_dyna=$full_dyna" >> $outfile 
125echo >> $outfile
126
127### Read host dependent default values
128### These variables will not be changed if they were set as argument
129###./host.sh $host
130# Later : Following lines should be set in host.sh file
131# begin host.sh
132if [ $fcm_arch == default ] ; then
133    # Find out current host and source specific paths and commands for the host
134    case $( hostname -s ) in
135        jean-zay*)
136            fcm_arch=X64_JEANZAY;;
137        irene170|irene171|irene190|irene191|irene192|irene193)
138            fcm_arch=X64_IRENE;;
139        irene172|irene173|irene194|irene195)
140            fcm_arch=X64_IRENE-AMD;;
141        asterix*|obelix*)
142            fcm_arch=ifort_LSCE
143            if [ "${parallel}" == "mpi_omp" ] ; then
144                echo "Warning!! Currently at Obelix hybrid mode is not possible."
145                echo "          Option -parallel mpi_omp is now changed to -parallel mpi"
146                echo ""
147                parallel=mpi
148            else
149                echo "You used -parallel" $parallel
150            fi ;;
151        spirit*)
152            fcm_arch=ifort_MESOIPSL;;
153        ciclad*|climserv*|loholt*|camelot*)
154            fcm_arch=ifort_CICLAD;;
155        *)
156            echo Current host is not known. You must use option -arch to specify which architecuture files to use.
157            echo Exit now.
158            exit
159    esac
160fi
161
162# Set a link to arch.env if arch-${fcm_arch}.env file exist for current fcm_arch.
163# The link arch.env is also set in config.card and will be used by libIGCM to ensure the same running environnement.
164if [ -f ARCH/arch-${fcm_arch}.env ] ; then
165    echo >> $outfile
166    echo "The file ARCH/arch-${fcm_arch}.env will now be sourced with modules needed for compilation for all components."
167    echo "Note that this new environement might be kept after compilation."
168    echo "If this is the case, source again your personal environment after compilation."
169    echo " Personal module list before sourcing of ARCH/arch.env file:"    >> $outfile 
170    module list   >> $outfile 2>&1
171    svn_version=$(module list -t | grep subversion)
172       
173    # Make a link to this file, to be used also in config.card
174    rm -f ARCH/arch.env
175    ln -s arch-${fcm_arch}.env ARCH/arch.env
176
177    # Source the file
178    source ARCH/arch.env   >> $outfile 2>&1
179    if [ X$svn_version != X ] ; then
180        module load ${svn_version}
181    fi
182    echo >> $outfile
183    echo " New module list after sourcing of ARCH/arch.env file:"    >> $outfile 
184    module list   >> $outfile 2>&1
185fi
186
187
188#### Clean if full_orch
189# If full recompilation of ORCHIDEE then first clean modipsl/lib folder
190if [ X${full_orch} == X"-full" ] ; then
191   rm -f $modipsl/lib/*
192fi
193
194#### 2 Do the compilation
195## 2.1 Compile ioipsl
196cd $modipsl/modeles/IOIPSL
197echo; echo "NOW COMPILE IOIPSL"
198echo >> $outfile ; echo " NOW COMPILE IOIPSL"   >> $outfile 
199
200echo ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag   >> $outfile 
201     ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag   >> $outfile 2>&1
202# Test if compiling succeded
203if [[ $? != 0 ]] ; then
204    echo "THERE IS A PROBLEM IN IOIPSL COMPILATION - STOP"
205    exit
206fi
207
208## 2.2 Compile oasis3-mct
209cd $modipsl/oasis3-mct/util/make_dir
210echo; echo "NOW COMPILE OASIS3-MCT"
211echo >> $outfile ; echo " NOW COMPILE OASIS3-MCT"   >> $outfile
212cp $mysrc_path/OASIS3-MCT/make_${fcm_arch} make.inc
213
214echo make -f TopMakefileOasis3 >> $outfile
215     make -f TopMakefileOasis3 >> $outfile 2>&1
216
217
218## 2.3 Compile xios
219cd $modipsl/modeles/XIOS
220echo; echo "NOW COMPILE XIOS"
221echo >> $outfile ; echo " NOW COMPILE XIOS"   >> $outfile 
222echo ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path ${netcdf_lib} --job 4 $full_xios   >> $outfile 
223     ./make_xios --use_oasis oasis3_mct --$optmode --arch $fcm_arch --arch_path $arch_path ${netcdf_lib} --job 4 $full_xios   >> $outfile 2>&1
224# Test if compiling succeded
225if [[ $? != 0 ]] ; then
226    echo "THERE IS A PROBLEM IN XIOS COMPILATION - STOP"
227    exit
228fi
229# Move executables to modipsl/bin
230if [ -f $modipsl/modeles/XIOS/bin/xios_server.exe ] ; then
231    mv $modipsl/modeles/XIOS/bin/xios_server.exe $modipsl/bin/xios_server_${optmode}.exe
232else
233    echo "THERE IS A PROBLEM IN XIOS COMPILATION EXECUTABLE MISSING - STOP"
234    exit
235fi
236
237
238## 2.4 Compile ORCHIDEE
239# Choose ORCHIDEE version to compile and create a link to generic folder name ORCHIDEE.
240# This link is needed for the compilation of ICOSA_LMDZ for it to find the orchidee librarie.
241cd $modipsl/modeles
242rm -f ORCHIDEE
243if [ $orchversion == orch22 ] ; then
244    ln -s ORCHIDEE_2_2 ORCHIDEE
245    cd $modipsl/modeles/ORCHIDEE_2_2
246    echo; echo "NOW COMPILE ORCHIDEE_2_2"
247    echo >> $outfile ; echo " NOW COMPILE ORCHIDEE_2_2"   >> $outfile 
248else
249    ln -s ORCHIDEE_trunk ORCHIDEE
250    cd $modipsl/modeles/ORCHIDEE_trunk
251    echo; echo "NOW COMPILE ORCHIDEE_trunk v4"
252    echo >> $outfile ; echo " NOW COMPILE ORCHIDEE_trunk v4"   >> $outfile 
253fi
254
255# Check if the compilation of ORCHIDEE was previsouly interupted prematured.
256# In that case, the files fcm.bld.lock exist. If the file exist, it is here removed to avoid makeorchidee_fcm
257# to ask question and wait for interactivly answer from the user.
258if [ -f build/fcm.bld.lock ] ; then
259    echo >> $outfile
260    echo " WARNING!! The file ORCHIDEE/build/fcm.bld.lock exist. "   >> $outfile
261    echo "           This means that the compilation is either currently on going in another terminal was previous interupted before the end."   >> $outfile
262    echo "           The file will now be removed. "   >> $outfile
263    echo >> $outfile
264    rm -f build/fcm.bld.lock
265fi
266
267echo    ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch  >> $outfile 
268        ./makeorchidee_fcm -j 8 -xios -parallel $parallel -$optmode -arch ${fcm_arch} -arch_path $arch_path $full_orch  >> $outfile 2>&1
269# Test if compiling finished
270if [[ $? != 0 ]] ; then
271    echo "THERE IS A PROBLEM IN ORCHIDEE COMPILATION - STOP"
272    exit
273fi
274
275# Rename exetubles for ORCHIDEE offline driver with suffix version
276cd $modipsl/bin
277if [ -f orchideedriver ] ; then mv orchideedriver orchideedriver.$orchversion ; fi
278if [ -f orchidee_ol ] ; then mv orchidee_ol orchidee_ol.$orchversion ; fi
279
280
281## 2.5 Compile NEMO
282nemo_root=$modipsl/modeles/NEMO
283cfg_ref=ORCA2_ICE_PISCES
284cfg_wrk=ORCA_ICE_TRC
285addkeys="key_oasis3 key_top key_si3 key_isf"
286delkeys=""
287
288if [ ${nemotop} == n ] ; then
289   cfg_wrk=ORCA_ICE
290   delkeys="key_top"
291fi
292
293if [ ${nemotop} == n ] ; then
294   echo; echo "NOW COMPILE NEMO with ice model SI3 without passive tracer model TOP"
295   echo >> $outfile ; echo " NOW COMPILE NEMO with ice model SI3 without passive tracer model TOP"   >> $outfile
296else
297   echo; echo "NOW COMPILE NEMO with ice model SI3 and passive tracer model TOP"
298   echo >> $outfile ; echo " NOW COMPILE NEMO with ice model SI3 and passive tracer model TOP"   >> $outfile
299fi
300
301echo >> $outfile ; echo cd $nemo_root  >> $outfile
302echo >> $outfile ; echo cp $mysrc_path/NEMO/arch-${fcm_arch}.fcm arch/CNRS/.   >> $outfile
303echo >> $outfile
304
305cd $nemo_root ; cp $mysrc_path/NEMO/arch-${fcm_arch}.fcm arch/CNRS/.
306
307# creation of config
308echo >> $outfile ; echo cd $nemo_root  >> $outfile
309echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref -j0 add_key "$addkeys"  del_key "$delkeys"   >> $outfile
310echo >> $outfile
311cd $nemo_root
312./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref -j0  add_key "$addkeys"  del_key "$delkeys"  >> $outfile 2>&1
313
314
315# Copy of specfic source files
316echo >> $outfile ; echo cp $mysrc_path/NEMO/*.*90  $nemo_root/cfgs/$cfg_wrk/MY_SRC/.   >> $outfile
317echo >> $outfile
318cp $mysrc_path/NEMO/*.*90  $nemo_root/cfgs/$cfg_wrk/MY_SRC/.
319
320
321if [ $full_nemo == y ] ; then
322   # To make a full compilation, first make a clean to remove all files produced during previous compilation
323   echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref clean   >> $outfile
324   echo >> $outfile
325   ./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref clean  >> $outfile 2>&1
326fi
327echo ./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref -j8  >> $outfile
328echo >> $outfile
329./makenemo -m ${fcm_arch} -n $cfg_wrk -r $cfg_ref -j8  >> $outfile 2>&1
330
331echo >> $outfile
332echo "Move nemo executable to modipsl/bin" >> $outfile
333echo ls -lrt $nemo_root/cfgs/$cfg_wrk/BLD/bin   >> $outfile
334ls -lrt $nemo_root/cfgs/$cfg_wrk/BLD/bin  >> $outfile
335echo >> $outfile
336
337if [ -f $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe ] ; then
338   mv $nemo_root/cfgs/$cfg_wrk/BLD/bin/nemo.exe $modipsl/bin/opa_${optmode}.exe
339else
340    echo "ERROR nemo.exe executable does not exist."
341    echo "THERE IS A PROBLEM IN NEMO COMPILATION - STOP"
342    exit
343fi
344
345
346## 2.6 Compile LMDZ
347cd $modipsl/modeles/LMDZ
348# Compile LMDZ as library to couple to DYNAMICO
349echo; echo "NOW COMPILE LMDZ FOR COUPLING TO DYNAMICO"
350echo >> $outfile ; echo " NOW COMPILE LMDZ FOR COUPLING TO DYNAMICO"   >> $outfile 
351
352# Retrieve the final svn release number, needed for radiative code suffix of executable
353lmdzsvn=`svnversion . | egrep -o "[0-9]+"  | awk 'NR==1'`
354# Temporary use of SOURCES/LMDZ to handle modifications needed by IPSLCM7
355cp $mysrc_path/LMDZ/*.*90  libf/phylmd/.
356
357# Check if the compilation of LMDZ was previsouly interupted prematured.
358# In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm
359# to ask question and wait for interactivly answer from the user.
360if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then
361  echo >> $outfile
362  echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. "   >> $outfile
363  echo "           This means that the compilation is either currently on going in another terminal was previous interupted before the end."   >> $outfile
364  echo "           The files dimension.h and .lock will now be removed. "   >> $outfile
365  echo >> $outfile
366  rm -f libf/grid/dimensions.h
367  rm -f .lock
368fi
369
370# Need to define the proper option for radiative code compilation. By default, we use rrtm
371case $rad in
372    oldrad) opt_rad="" ;;
373    rrtm)   if [ $lmdzsvn -le 4185 ] ; then opt_rad="-rrtm true" ; else opt_rad="-rad rrtm" ; fi ;;
374    ecrad)  opt_rad="-rad ecrad" ;;
375    *) echo Only oldrad rrtm ecrad for rad option ; exit
376esac
377
378if [ $lmdzsvn -le 4185 -a $rad = "ecrad" ] ; then echo "ecrad only available for LMDZ rev starting with 4186 " ; exit ; fi
379
380echo ./makelmdz_fcm -p lmd -c OMCT $opt_rad -$optmode -mem -parallel $parallel -libphy -v $orchcomp -io xios -arch $fcm_arch -j 8 $full_lmdz    >> $outfile 
381     ./makelmdz_fcm -p lmd -c OMCT $opt_rad -$optmode -mem -parallel $parallel -libphy -v $orchcomp -io xios -arch $fcm_arch -j 8 $full_lmdz    >> $outfile 2>&1
382# Test if compiling finished
383if [[ $? != 0 ]] ; then
384    echo "THERE IS A PROBLEM IN LMDZ PHYSICS COMPILATION - STOP"
385    exit
386fi
387
388
389## 2.6 Compile DYNAMICO
390cd $modipsl/modeles/DYNAMICO
391echo; echo "NOW COMPILE DYNAMICO "
392echo >> $outfile ; echo " NOW COMPILE DYNAMICO"   >> $outfile 
393
394echo ./make_icosa -$optmode -with_fcm1 -parallel $parallel -external_ioipsl -with_oasis -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_dyna    >> $outfile 
395     ./make_icosa -$optmode -with_fcm1 -parallel $parallel -external_ioipsl -with_oasis -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_dyna    >> $outfile 2>&1
396# Test if compiling finished
397if [[ $? != 0 ]] ; then
398    echo "THERE IS A PROBLEM IN DYNAMICO COMPILATION - STOP"
399    exit
400fi
401
402
403## 2.7 Compile interface ICOSA_LMDZ
404cd $modipsl/modeles/ICOSA_LMDZ
405echo; echo "NOW COMPILE ICOSA_LMDZ "
406echo >> $outfile ; echo " NOW COMPILE ICOSA_LMDZ"   >> $outfile 
407
408echo ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_oasis -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_dyna    >> $outfile 
409     ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_oasis -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_dyna    >> $outfile 2>&1
410# Test if compiling finished
411if [[ $? != 0 ]] ; then
412    echo "THERE IS A PROBLEM IN ICOSA_LMDZ COMPILATION - STOP"
413    exit
414fi
415# Move executables to modipsl/bin
416if [ -f $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe ] ; then
417    mv $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe $modipsl/bin/icosa_lmdz_${orchversion}_${optmode}.exe
418else
419    echo "THERE IS A PROBLEM IN ICOSA_LMDZ COMPILATION EXECUTABLE MISSING - STOP"
420    exit
421fi
422
423
424
425## 2.8 Compile LMDZ for regular latlon configuration
426if [ $regular_latlon = yes ] ; then
427
428    cd $modipsl/modeles/LMDZ
429    # Compile LMDZ regular lat-lon exectuable
430    echo; echo "NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}"
431    echo >> $outfile ; echo " NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm}"   >> $outfile 
432    # Check if the compilation of LMDZ was previsouly interupted prematured.
433    # In that case, the files dimension.h and .lock exist. If the files exist, they are here removed to avoid makelmdz_fcm
434    # to ask question and wait for interactivly answer from the user.
435    if [ -f libf/grid/dimensions.h ] || [ -f .lock ] ; then
436        echo >> $outfile
437        echo " WARNING!! The file LMDZ/libf/grid/dimension.h and/or the LMDZ/.lock exist. "   >> $outfile
438        echo "           This means that the compilation is either currently on going in another terminal was previous interupted before the end."   >> $outfile
439        echo "           The files dimension.h and .lock will now be removed. "   >> $outfile
440        echo >> $outfile
441        rm -f libf/grid/dimensions.h
442        rm -f .lock
443    fi
444    echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd $opt_rad -$optmode -mem -parallel $parallel -io xios -v $orchcomp -arch $fcm_arch -j 8 $full_lmdz gcm    >> $outfile 
445         ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd $opt_rad -$optmode -mem -parallel $parallel -io xios -v $orchcomp -arch $fcm_arch -j 8 $full_lmdz gcm    >> $outfile 2>&1
446    # Test if compiling finished
447    if [[ $? != 0 ]] ; then
448        echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP"
449        exit
450    fi
451
452    # Find executable suffix
453    suffix=_${resol_atm}_phylmd
454    if [ $lmdzsvn -ge 4186 ] ; then suffix=${suffix}_${rad} ; fi
455    if [ $parallel == seq ] || [ $parallel == none ] ; then
456        suffix=${suffix}_seq_orch.e
457    else
458        suffix=${suffix}_para_mem_orch_couple.e
459    fi
460    echo gcm suffix = $suffix
461   
462    # Move executables to modipsl/bin folder
463    echo "Move gcm.e executable to modipsl/bin"
464    if [ -f $modipsl/modeles/LMDZ/bin/gcm${suffix} ] ;  then
465        mv $modipsl/modeles/LMDZ/bin/gcm${suffix} $modipsl/bin/gcm_${resol_atm}_${orchversion}_${optmode}.e
466    else
467        echo "ERROR gcm${suffix} executable does not exist." 
468        echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP"
469        exit
470    fi   
471
472    # Compile ce0l initialization program for LMDZ regular lat-lon exectuable
473    echo; echo "NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}"
474    echo >> $outfile ; echo " NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm}"   >> $outfile 
475
476    echo ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v $orchcomp -arch $fcm_arch -j 8 $full_lmdz ce0l    >> $outfile 
477         ./makelmdz_fcm -d ${resol_atm} -c OMCT -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v $orchcomp -arch $fcm_arch -j 8 $full_lmdz ce0l    >> $outfile 2>&1
478    # Test if compiling finished
479    if [[ $? != 0 ]] ; then
480        echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP"
481        exit
482    fi
483   
484 
485    # Move executable ce0l to modipsl/bin folder
486    echo "Move ce0l executable to modipsl/bin"
487    if [ -f $modipsl/modeles/LMDZ/bin/ce0l${suffix} ] ;  then
488        mv $modipsl/modeles/LMDZ/bin/ce0l${suffix} $modipsl/bin/ce0l_${resol_atm}_${optmode}.e
489    else
490        echo "ERROR ce0l${suffix} executable does not exist." 
491        echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP"
492        exit
493    fi
494fi
495
496echo >>$outfile ; echo "ALL COMPILING FINISHED" >> $outfile
497echo ls -lrt modipsl/bin >> $outfile
498ls -lrt $modipsl/bin >> $outfile
499
500echo; echo "ALL COMPILING FINISHED" ; echo
501echo "Executables are found in modipsl/bin"
502echo "Check that executable names correspond with the name set in config.card before launching the job"
503echo ls -lrt modipsl/bin
504ls -lrt $modipsl/bin
505
506date
507
508exit
509
510
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