1 | #!/usr/bin/env python |
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2 | # -*- coding: utf-8 -*- |
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3 | |
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4 | # this must come first |
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5 | from __future__ import print_function, unicode_literals, division |
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6 | |
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7 | # standard library imports |
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8 | import socket |
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9 | import os |
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10 | import os.path |
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11 | import glob |
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12 | import shutil |
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13 | import subprocess |
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14 | import datetime as dt |
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15 | import numpy as np |
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16 | import ConfigParser as cp |
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17 | |
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18 | # Application library imports |
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19 | |
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20 | |
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21 | ######################################## |
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22 | def dods_cp(filein, DIR): |
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23 | """ |
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24 | """ |
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25 | if not DIR["DODS"]: |
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26 | print("DODS directory not defined") |
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27 | return |
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28 | |
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29 | basefile = os.path.basename(filein) |
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30 | |
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31 | fileout = os.path.join(DIR["DODS"], basefile) |
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32 | filepng = os.path.join(DIR["DODS"], "img", basefile.split(".")[0] + ".png") |
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33 | |
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34 | #Â Copy file |
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35 | shutil.copy(filein, fileout) |
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36 | |
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37 | # Convert it to png for web page |
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38 | command = ["convert", "-density", "200", fileout, filepng] |
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39 | |
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40 | try : |
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41 | subprocess.call(command) |
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42 | except Exception as rc : |
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43 | print("Error in convert for {}:\n{}".format(fileout, rc)) |
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44 | |
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45 | return |
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46 | |
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47 | |
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48 | ######################################## |
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49 | def parse_config(filename): |
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50 | |
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51 | DIR = {} |
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52 | OUT = {} |
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53 | |
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54 | config = cp.ConfigParser(allow_no_value=True) |
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55 | config.optionxform = str |
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56 | config.read(filename) |
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57 | |
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58 | for section in ("projet", "directories", "files"): |
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59 | if not config.has_section(section): |
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60 | print("Missing section {} in {}, we stop".format(section, filename)) |
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61 | exit(1) |
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62 | |
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63 | # .. Project name .. |
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64 | # ------------------ |
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65 | section = "projet" |
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66 | option = "name" |
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67 | project_name = config.get(section, option) |
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68 | |
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69 | # ..Common directories .. |
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70 | # ----------------------- |
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71 | section = "directories" |
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72 | for option in config.options(section): |
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73 | DIR[option] = config.get(section, option) |
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74 | |
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75 | if DIR[option] and not os.path.isdir(DIR[option]): |
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76 | print("mkdir {}".format(DIR[option])) |
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77 | try : |
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78 | os.makedirs(DIR[option]) |
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79 | except Exception as rc : |
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80 | print("Could not create {}:\n{}".format(DIR[option], rc)) |
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81 | |
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82 | # ..Common files .. |
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83 | # ----------------- |
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84 | section = "files" |
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85 | for option in config.options(section): |
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86 | OUT[option] = config.get(section, option) |
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87 | |
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88 | return (project_name, DIR, OUT) |
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89 | |
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90 | |
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91 | ######################################## |
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92 | def string_to_percent(x): |
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93 | """ |
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94 | """ |
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95 | return float(x.strip("%"))/100. |
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96 | |
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97 | |
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98 | ######################################## |
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99 | def string_to_size_unit(x): |
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100 | """ |
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101 | """ |
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102 | if unicode(x).isdecimal(): |
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103 | x = x + "o" |
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104 | |
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105 | (size, unit) = (float(x[:-1]), x[-1]) |
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106 | |
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107 | return SizeUnit(size, unit) |
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108 | |
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109 | |
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110 | ######################################## |
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111 | def string_to_float(x): |
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112 | """ |
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113 | """ |
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114 | return float(x.strip("h")) |
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115 | |
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116 | |
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117 | ######################################## |
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118 | def string_to_date(ssaammjj, fmt="%Y-%m-%d"): |
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119 | """ |
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120 | """ |
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121 | return dt.datetime.strptime(ssaammjj, fmt) |
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122 | |
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123 | |
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124 | ######################################## |
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125 | def string_to_datetime(string, fmt="%Y-%m-%d-%H:%M"): |
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126 | """ |
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127 | """ |
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128 | return dt.datetime.strptime(string, fmt) |
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129 | |
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130 | |
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131 | # ######################################## |
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132 | # def date_to_string(dtdate, fmt="%Y-%m-%d"): |
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133 | # """ |
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134 | # """ |
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135 | # return dt.datetime.strftime(dtdate, fmt) |
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136 | |
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137 | |
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138 | ######################################## |
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139 | def where_we_run(): |
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140 | |
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141 | res = "" |
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142 | if "curie" in socket.getfqdn(): |
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143 | res = "curie" |
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144 | elif "ipsl" in socket.getfqdn(): |
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145 | res = "ipsl" |
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146 | else: |
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147 | res = "default" |
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148 | |
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149 | return res |
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150 | |
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151 | |
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152 | ######################################## |
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153 | def get_last_file(dir_data, pattern): |
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154 | """ |
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155 | """ |
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156 | current_dir = os.getcwd() |
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157 | os.chdir(dir_data) |
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158 | filename = pattern + "*" |
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159 | file_list = glob.glob(os.path.join(dir_data, filename)) |
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160 | if file_list: |
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161 | res = sorted(file_list)[-1] |
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162 | else: |
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163 | res = None |
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164 | os.chdir(current_dir) |
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165 | return res |
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166 | |
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167 | |
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168 | ######################################## |
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169 | def get_input_files(dir_data, file_list): |
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170 | """ |
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171 | """ |
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172 | res = [] |
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173 | |
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174 | for filename in file_list: |
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175 | res.append(get_last_file(dir_data, filename)) |
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176 | |
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177 | if None in res: |
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178 | print("\nMissing one or more input files, we stop.") |
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179 | for f_in, f_out in zip(file_list, res): |
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180 | print("=> {}: {}".format(f_in, f_out)) |
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181 | exit(1) |
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182 | |
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183 | return res |
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184 | |
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185 | |
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186 | ######################################## |
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187 | def plot_save(img_in, img_out, title): |
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188 | """ |
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189 | """ |
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190 | from matplotlib.backends.backend_pdf import PdfPages |
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191 | |
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192 | dpi = 200. |
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193 | |
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194 | print(img_in) |
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195 | with PdfPages(img_in) as pdf: |
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196 | pdf.savefig(dpi=dpi) |
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197 | |
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198 | # pdf file's metadata |
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199 | d = pdf.infodict() |
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200 | d["Title"] = title |
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201 | d["Author"] = os.path.basename(__file__) |
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202 | # d["Subject"] = "Time spent over specific commands during create_ts \ |
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203 | # jobs at IDRIS and four configurations at TGCC" |
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204 | # d["Keywords"] = "bench create_ts TGCC IDRIS ncrcat" |
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205 | # d["CreationDate"] = dt.datetime(2009, 11, 13) |
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206 | # d["ModDate"] = dt.datetime.today() |
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207 | |
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208 | # if os.path.isdir(DIR["SAVEPLOT"]): |
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209 | # # img_out = os.path.join(DIR["SAVEPLOT"], |
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210 | # # "{}_{}.pdf".format(img_name, suffix)) |
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211 | # shutil.copy(img_in, img_out) |
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212 | |
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213 | |
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214 | ######################################## |
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215 | class Project(object): |
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216 | |
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217 | #--------------------------------------- |
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218 | def __init__(self, project_name): |
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219 | self.project = project_name |
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220 | |
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221 | #--------------------------------------- |
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222 | def fill_data(self, row): |
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223 | # import json |
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224 | # dico = json.load(open(filein, "r")) |
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225 | # self.deadline = string_to_date(dico["deadline"]) + \ |
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226 | # dt.timedelta(days=-1) |
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227 | # self.alloc = dico["alloc"] |
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228 | self.id = row["id"] |
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229 | self.centre = row["centre"] |
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230 | self.machine = row["machine"] |
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231 | self.node = row["node_type"] |
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232 | self.start_date = row["start_date"] |
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233 | self.end_date = row["end_date"] |
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234 | self.alloc = row["total_hrs"] |
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235 | |
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236 | delta = self.end_date - self.start_date |
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237 | self.days = delta.days + 1 |
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238 | |
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239 | |
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240 | ######################################## |
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241 | class SizeUnit(object): |
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242 | #--------------------------------------- |
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243 | def __init__(self, size, unit): |
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244 | self.size = size |
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245 | self.unit = unit |
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246 | |
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247 | #--------------------------------------- |
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248 | def __repr__(self): |
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249 | return "{:6.2f}{}o".format(self.size, self.unit) |
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250 | |
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251 | #--------------------------------------- |
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252 | def convert_size(self, unit_out): |
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253 | """ |
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254 | """ |
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255 | prefixes = ["o", "K", "M", "G", "T", "P", "H"] |
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256 | |
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257 | if not self.size or \ |
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258 | self.unit == unit_out: |
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259 | size_out = self.size |
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260 | else: |
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261 | idx_deb = prefixes.index(self.unit) |
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262 | idx_fin = prefixes.index(unit_out) |
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263 | size_out = self.size |
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264 | for i in xrange(abs(idx_fin-idx_deb)): |
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265 | if idx_fin > idx_deb: |
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266 | size_out = size_out / 1024 |
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267 | else: |
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268 | size_out = size_out * 1024 |
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269 | |
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270 | return SizeUnit(size_out, unit_out) |
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271 | |
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272 | |
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273 | ######################################## |
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274 | if __name__ == '__main__': |
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275 | pass |
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